AC013394.2

General Information

Gene Name : AC013394.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AC013394.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AC013394.2 is not avaliable on ENCORE database.

Proteins bound to RNA

AC013394.2 RNA is bound by 31 proteins.

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eCLIP assay for AC013394.2 is not avaliable on ENCORE database.

31 proteins are bound to AC013394.2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	93426660	93426791	+	5'-UTR,intron-Distal,intron-Proximal	5.05081	35.48132	K562	EFTUD2
chr15	93426445	93426600	+	5'-UTR,intron-Distal,intron-Proximal	4.22522	32.34360	HepG2	EFTUD2
chr15	93426434	93426567	+	5'-UTR,intron-Distal,intron-Proximal	4.45449	27.06924	K562	EFTUD2
chr15	93426632	93426836	+	5'-UTR,intron-Distal,intron-Proximal	3.10288	25.32025	K562	DROSHA
chr15	93440921	93441037	+	intron-Distal,intron-Proximal	3.83867	25.13567	K562	GPKOW
chr15	93426835	93426878	+	intron-Distal,intron-Proximal	6.49143	22.29197	K562	TIA1
chr15	93435216	93435285	+	5'-UTR,intron-Proximal	3.70152	20.22617	K562	SF3B4
chr15	93426791	93426874	+	intron-Distal,intron-Proximal	4.34603	17.43006	K562	EFTUD2
chr15	93440939	93441001	+	intron-Distal,intron-Proximal	3.58243	16.89133	K562	SF3B4
chr15	93426945	93427024	+	intron-Distal,intron-Proximal	3.33783	16.84640	K562	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 82 entries

eCLIP assay for AC013394.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for AC013394.2 is not available on ENCORE database.
66 RBPs can affect the levels of AC013394.2.

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The Knockdown/knockout RNA-Seq assay for AC013394.2 is not available on ENCORE database.

66 RBPs can affect the gene expression of AC013394.2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AC013394.2	ENSG00000272888.1	3634.44280	818.87300	2.14990	82.00480	79.00230	K562	PUS1
AC013394.2	ENSG00000272888.1	1871.84120	797.88810	1.23010	38.45560	36.15640	K562	RBM15
AC013394.2	ENSG00000272888.1	1658.73130	793.55110	1.06360	33.65980	31.75150	K562	AGGF1
AC013394.2	ENSG00000272888.1	1548.96890	825.72920	0.90750	15.68210	13.90830	K562	AKAP8L
AC013394.2	ENSG00000272888.1	1821.70430	688.08170	1.40450	15.08740	12.48950	K562	NAA15
AC013394.2	ENSG00000272888.1	907.39970	525.37020	0.78830	12.47170	10.94940	HepG2	EIF4G1
AC013394.2	ENSG00000272888.1	300.22700	652.02480	-1.11890	10.74180	9.76030	HepG2	AKAP1
AC013394.2	ENSG00000272888.1	1773.28170	1070.86180	0.72750	9.63400	8.64320	K562	AQR
AC013394.2	ENSG00000272888.1	294.18940	592.16680	-1.00930	9.59560	8.45620	HepG2	NCBP2
AC013394.2	ENSG00000272888.1	848.89640	548.67870	0.62950	9.19400	7.97890	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 71 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for AC013394.2 is not available on ENCORE database.

10 RBPs can affect the splicing of AC013394.2 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	AC013394.2	ENSG00000272888.1	chr15	+	93426814	93427008			93426244	93426416	93428744	93428814	0.41200	0.00000	0.00000	included	K562	PRPF8
SE	AC013394.2	ENSG00000272888.1	chr15	+	93426814	93427008			93426244	93426416	93428744	93428814	0.27700	0.00000	0.00000	included	K562	AQR
SE	AC013394.2	ENSG00000272888.1	chr15	+	93426814	93427008			93426244	93426416	93428744	93428814	0.34500	0.00000	0.00015	included	K562	SUPV3L1
SE	AC013394.2	ENSG00000272888.1	chr15	+	93426814	93427008			93426244	93426416	93428744	93428814	0.45500	0.00000	0.00000	included	K562	EFTUD2
SE	AC013394.2	ENSG00000272888.1	chr15	+	93431414	93431544			93429398	93429484	93435233	93435302	0.05500	0.00000	0.00048	included	K562	TARDBP
A3SS	AC013394.2	ENSG00000272888.1	chr15	+	93429374	93429452			93429398	93429452	93428601	93428814	0.20800	0.00000	0.00000	longer	K562	AQR
SE	AC013394.2	ENSG00000272888.1	chr15	+	93426814	93427008			93426244	93426416	93428744	93428814	0.35800	0.00001	0.00276	included	HepG2	PCBP2
SE	AC013394.2	ENSG00000272888.1	chr15	+	93426814	93427008			93426244	93426416	93428744	93428814	0.22700	0.00004	0.00302	included	K562	TARDBP
SE	AC013394.2	ENSG00000272888.1	chr15	+	93426814	93427008			93426244	93426416	93428744	93428814	0.21400	0.00008	0.00222	included	K562	HNRNPC
MXE	AC013394.2	ENSG00000272888.1	chr15	+	93428744	93428814	93429398	93429484	93426973	93427008	93435233	93435264	0.10500	0.00019	0.00210	1included	K562	AQR

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AC013394.2

General Information

Functions

Localization

Domains (AlphaFold: AC013394.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AC013394.2 is not avaliable on ENCORE database.

31 proteins are bound to AC013394.2 RNA:

eCLIP assay for AC013394.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AC013394.2 is not available on ENCORE database.

66 RBPs can affect the gene expression of AC013394.2 :

The Knockdown/knockout RNA-Seq assay for AC013394.2 is not available on ENCORE database.

10 RBPs can affect the splicing of AC013394.2 :

The Knockdown/knockout RNA-Seq assay for AC013394.2 is not avaliable on ENCORE database.