AC013394.2

General Information

Gene Name       : AC013394.2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AC013394.2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AC013394.2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AC013394.2 RNA is bound by 31 proteins.  







eCLIP assay for AC013394.2 is not avaliable on ENCORE database.





31 proteins are bound to AC013394.2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr159342676693426813+5'-UTR,intron-Distal,intron-Proximal3.361686.06585K562SF3B4
chr159342655293426639+5'-UTR,intron-Distal3.184453.76643K562EWSR1
chr159342838493428479+intron-Distal3.613764.72143K562TIA1
chr159342655493426576+5'-UTR,intron-Distal4.858186.40474K562GEMIN5
chr159342671293426775+5'-UTR,intron-Distal,intron-Proximal4.161206.74777HepG2CDC40
chr159342683593426884+intron-Distal,intron-Proximal3.014154.38249K562RBM15
chr159342677593426876+intron-Distal,intron-Proximal3.447846.42818HepG2CDC40
chr159342679293426881+intron-Distal,intron-Proximal3.009208.47810K562GPKOW
chr159342678593426890+intron-Distal,intron-Proximal3.755515.97235K562FUS
chr159342654793426687+5'-UTR,intron-Distal3.192936.12023HepG2XRN2
chr159342650093426617+5'-UTR,intron-Distal,intron-Proximal3.334197.91464HepG2XPO5
chr159342655993426604+5'-UTR,intron-Distal5.183055.19274K562XRN2
chr159342696193427017+intron-Distal,intron-Proximal3.147136.58183K562EFTUD2
chr159342679193426874+intron-Distal,intron-Proximal4.3460317.43006K562EFTUD2
chr159342661593426678+5'-UTR,intron-Distal3.427825.00042K562XRN2
chr159342680693426871+intron-Distal,intron-Proximal4.093734.04666K562NOLC1
chr159342659793426653+5'-UTR,intron-Distal3.257594.46727K562AATF
chr159342665393426823+5'-UTR,intron-Distal,intron-Proximal3.1815910.54900K562AATF
chr159342666093426791+5'-UTR,intron-Distal,intron-Proximal5.0508135.48132K562EFTUD2
chr159342694593427024+intron-Distal,intron-Proximal3.3378316.84640K562CSTF2T
chr159343179993431849+intron-Distal3.162066.02054K562KHSRP
chr159342694393427016+intron-Distal,intron-Proximal4.893775.43661HepG2CSTF2
chr159343536593435430+intron-Distal,intron-Proximal3.291914.98422K562PRPF8
chr159342644593426600+5'-UTR,intron-Distal,intron-Proximal4.2252232.34360HepG2EFTUD2
chr159342694593427017+intron-Distal,intron-Proximal3.532998.40768K562FMR1
chr159342661393426653+5'-UTR,intron-Distal3.052724.29610K562CSTF2T
chr159343507593435113+intron-Distal3.116306.07637K562KHSRP
chr159342655193426608+5'-UTR,intron-Distal4.015659.92963K562CSTF2T
chr159342668793426761+5'-UTR,intron-Distal,intron-Proximal3.041334.54580HepG2XRN2
chr159342653793426597+5'-UTR,intron-Distal4.140368.54626K562AATF
chr159342643493426567+5'-UTR,intron-Distal,intron-Proximal4.4544927.06924K562EFTUD2
chr159342647393426533+5'-UTR,intron-Distal,intron-Proximal3.5567810.00268K562DROSHA
chr159342660493426721+5'-UTR,intron-Distal,intron-Proximal3.089984.33751HepG2GTF2F1
chr159342664093426687+5'-UTR,intron-Distal3.413377.39418HepG2EFTUD2
chr159342663293426836+5'-UTR,intron-Distal,intron-Proximal3.1028825.32025K562DROSHA
chr159342647793426526+intron-Distal,intron-Proximal3.727554.22073K562XRN2
chr159342644793426520+intron-Distal,intron-Proximal3.059599.61660K562CSTF2T
chr159343607393436142+intron-Distal3.227148.62899HepG2HNRNPC
chr159343158693431628+intron-Distal,intron-Proximal4.077343.31110K562TIA1
chr159342683593426878+intron-Distal,intron-Proximal6.4914322.29197K562TIA1
chr159343039193430460+intron-Distal4.368015.25062HepG2CSTF2
chr159342951493429589+intron-Distal,intron-Proximal5.364586.13333K562RBM22
chr159342667893426761+5'-UTR,intron-Distal,intron-Proximal3.266645.61574K562XRN2
chr159342664393426714+5'-UTR,intron-Distal4.365065.10338HepG2KHSRP
chr159342653993426591+5'-UTR,intron-Distal3.170694.31701K562FUS
chr159342670593426743+5'-UTR,intron-Distal,intron-Proximal5.069598.79061HepG2EFTUD2
chr159342653293426650+5'-UTR,intron-Distal4.363369.83092K562NONO
chr159342680493426835+intron-Distal,intron-Proximal3.7995210.35156K562TIA1
chr159342655393426671+5'-UTR,intron-Distal3.318337.93684HepG2CSTF2T
chr159342645293426539+5'-UTR,intron-Distal,intron-Proximal3.435048.14127K562FUS
chr159342653893426603+5'-UTR,intron-Distal4.363953.70291HepG2FAM120A
chr159342641593426463+intron-Proximal3.6734011.70045K562AQR
chr159344093993441001+intron-Distal,intron-Proximal3.5824316.89133K562SF3B4
chr159342939793429448+5'-UTR,intron-Proximal3.3141612.80369HepG2BCLAF1
chr159342950293429556+intron-Proximal4.266594.97297K562TIA1
chr159343522093435281+5'-UTR,intron-Proximal3.076004.31505K562U2AF2
chr159342630393426419+intron-Proximal3.312114.41792K562AKAP1
chr159343521693435285+5'-UTR,intron-Proximal3.7015220.22617K562SF3B4
chr159342635993426434+intron-Proximal3.6950913.55722K562EFTUD2
chr159344094193440961+intron-Distal,intron-Proximal3.241705.47260HepG2AQR
chr159342939793429443+5'-UTR,intron-Proximal3.337525.03897K562PRPF8
chr159342879093428848+5'-UTR,intron-Proximal3.660706.00776K562PRPF8
chr159342880493428849+5'-UTR,intron-Proximal3.803683.71591HepG2PRPF8
chr159342944893429576+5'-UTR,intron-Proximal3.2120614.90710K562EFTUD2
chr159344090093440939+intron-Distal,intron-Proximal5.700718.42776K562SF3B4
chr159342934093429442+5'-UTR,intron-Proximal3.0194313.55034K562SF3B4
chr159342632693426438+intron-Proximal3.115635.14743K562XRN2
chr159344093693441029+intron-Distal,intron-Proximal3.2763012.65150HepG2BUD13
chr159342645493426472+intron-Proximal3.562886.20453K562TIA1
chr159344094393441026+intron-Distal,intron-Proximal3.0256116.63425K562BUD13
chr159342635793426440+intron-Proximal3.9820310.64371HepG2EFTUD2
chr159342645993426507+intron-Proximal3.198703.36616K562NONO
chr159342631093426430+intron-Proximal3.970877.48572HepG2SRSF1
chr159343530393435357+intron-Proximal3.556487.70675K562AQR
chr159342939693429453+5'-UTR,intron-Proximal3.116376.45317HepG2U2AF2
chr159344092193441037+intron-Distal,intron-Proximal3.8386725.13567K562GPKOW
chr159344092193440937+intron-Distal,intron-Proximal3.667363.52230K562AQR
chr159342645393426515+intron-Proximal3.341584.35063HepG2PRPF4
chr159342947593429523+5'-UTR,intron-Proximal3.413806.68812HepG2BUD13
chr159342645193426503+intron-Proximal3.402805.21923HepG2CDC40
chr159342947293429541+5'-UTR,intron-Proximal4.1446414.00166K562PRPF8
chr159342939293429503+5'-UTR,intron-Proximal4.275498.11971K562SRSF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AC013394.2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AC013394.2 is not available on ENCORE database.

  • 66 RBPs can affect the levels of AC013394.2.  








The Knockdown/knockout RNA-Seq assay for AC013394.2 is not available on ENCORE database.





66 RBPs can affect the gene expression of AC013394.2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AC013394.2ENSG00000272888.1300.22700652.02480-1.1189010.741809.76030HepG2AKAP1
AC013394.2ENSG00000272888.1433.51380603.13130-0.476402.056501.40280HepG2CNOT7
AC013394.2ENSG00000272888.1373.52350532.63680-0.512005.602704.59860HepG2DAZAP1
AC013394.2ENSG00000272888.1368.40960624.56130-0.761506.309005.40250HepG2DDX3X
AC013394.2ENSG00000272888.1529.10550328.618100.687002.214101.59700HepG2DKC1
AC013394.2ENSG00000272888.1372.48820515.75900-0.469502.564301.99370HepG2EIF2S1
AC013394.2ENSG00000272888.1391.00800282.869700.467002.700601.63040HepG2EIF3G
AC013394.2ENSG00000272888.1402.20400554.98080-0.464502.089901.48790HepG2EIF4B
AC013394.2ENSG00000272888.1907.39970525.370200.7883012.4717010.94940HepG2EIF4G1
AC013394.2ENSG00000272888.1837.92100709.344600.240202.059601.52480HepG2ETF1
AC013394.2ENSG00000272888.1380.84700575.14670-0.594704.112403.28010HepG2FXR1
AC013394.2ENSG00000272888.1775.91170575.347900.431402.681202.03540HepG2MAGOH
AC013394.2ENSG00000272888.1292.73490578.55180-0.982908.535807.47830HepG2MATR3
AC013394.2ENSG00000272888.1294.18940592.16680-1.009309.595608.45620HepG2NCBP2
AC013394.2ENSG00000272888.1388.00110527.30250-0.442602.458701.77440HepG2PABPC4
AC013394.2ENSG00000272888.1285.10190205.883500.469502.600901.84930HepG2PRPF4
AC013394.2ENSG00000272888.1372.93050526.32500-0.497004.403903.74840HepG2PTBP1
AC013394.2ENSG00000272888.1335.63600504.13490-0.586903.752603.07000HepG2PUF60
AC013394.2ENSG00000272888.1404.46990535.12050-0.403803.887203.21000HepG2PUM1
AC013394.2ENSG00000272888.1462.01970570.04770-0.303101.831801.30760HepG2QKI
AC013394.2ENSG00000272888.1458.81910307.666800.576502.261401.61920HepG2RAVER1
AC013394.2ENSG00000272888.1370.38140266.344800.475602.202501.58360HepG2RPLP0
AC013394.2ENSG00000272888.1640.17730325.038300.977808.431407.20230HepG2SF3A3
AC013394.2ENSG00000272888.1820.15200669.649100.292402.636202.14260HepG2SRFBP1
AC013394.2ENSG00000272888.1355.63300240.274600.565602.598001.63170HepG2SRSF3
AC013394.2ENSG00000272888.1813.93760581.426700.485205.937905.24070HepG2SSB
AC013394.2ENSG00000272888.1460.64240287.501700.680003.297401.97860HepG2SUB1
AC013394.2ENSG00000272888.1491.66980326.659200.589803.473902.72650HepG2SUPV3L1
AC013394.2ENSG00000272888.1601.68550472.405700.348902.297001.53320HepG2TIA1
AC013394.2ENSG00000272888.1184.48620408.61020-1.147203.330402.24620HepG2U2AF2
AC013394.2ENSG00000272888.1550.67370299.150700.880206.094004.55830HepG2UPF2
AC013394.2ENSG00000272888.1373.88480278.302300.425802.642902.05710HepG2UTP3
AC013394.2ENSG00000272888.1334.34440203.174800.718506.031005.09950HepG2ZC3H8
AC013394.2ENSG00000272888.11658.73130793.551101.0636033.6598031.75150K562AGGF1
AC013394.2ENSG00000272888.11387.10940872.006200.669608.898606.85840K562AKAP8
AC013394.2ENSG00000272888.11548.96890825.729200.9075015.6821013.90830K562AKAP8L
AC013394.2ENSG00000272888.11773.281701070.861800.727509.634008.64320K562AQR
AC013394.2ENSG00000272888.11190.88830866.395000.458804.979203.71560K562ATP5C1
AC013394.2ENSG00000272888.11288.60050948.326300.442205.039803.40270K562CCDC124
AC013394.2ENSG00000272888.1846.31200609.635700.473105.501304.62830K562DDX47
AC013394.2ENSG00000272888.1438.55620714.60560-0.704405.110104.32240K562FXR1
AC013394.2ENSG00000272888.11088.49340763.355600.511804.361902.52930K562G3BP1
AC013394.2ENSG00000272888.1939.71140745.338500.334202.392501.68740K562GRSF1
AC013394.2ENSG00000272888.11811.57270894.721701.017606.494404.36210K562HNRNPA2B1
AC013394.2ENSG00000272888.1687.56940423.309600.699706.960906.05400K562HNRNPC
AC013394.2ENSG00000272888.1777.70400544.329300.514603.938702.99330K562HSPD1
AC013394.2ENSG00000272888.11592.44900876.293400.861709.633407.83720K562KIF1C
AC013394.2ENSG00000272888.11316.59390838.837900.650207.806105.62650K562MAK16
AC013394.2ENSG00000272888.1566.85080837.54930-0.563202.616001.72030K562MATR3
AC013394.2ENSG00000272888.11821.70430688.081701.4045015.0874012.48950K562NAA15
AC013394.2ENSG00000272888.11162.08360812.703900.515803.989601.78800K562PABPC4
AC013394.2ENSG00000272888.11293.49620782.935900.724203.546702.38700K562PABPN1
AC013394.2ENSG00000272888.1275.41040373.68390-0.440202.054901.33870K562PCBP3
AC013394.2ENSG00000272888.1983.911601188.40870-0.272402.331101.44830K562PUM2
AC013394.2ENSG00000272888.13634.44280818.873002.1499082.0048079.00230K562PUS1
AC013394.2ENSG00000272888.11871.84120797.888101.2301038.4556036.15640K562RBM15
AC013394.2ENSG00000272888.1979.75360729.264800.425903.783402.19160K562RBM25
AC013394.2ENSG00000272888.1228.80280346.32370-0.598003.672402.53130K562RCC2
AC013394.2ENSG00000272888.1375.33880669.68510-0.835304.204302.94250K562RPS3
AC013394.2ENSG00000272888.1516.44410799.14830-0.629903.178602.42540K562SRSF1
AC013394.2ENSG00000272888.1352.75670646.64480-0.874303.939002.65160K562SRSF4
AC013394.2ENSG00000272888.1890.36590567.242000.650308.617406.26430K562SSB
AC013394.2ENSG00000272888.1265.99990387.86580-0.544103.229902.18900K562TRIM56
AC013394.2ENSG00000272888.1726.32840524.366700.469904.700603.03870K562TROVE2
AC013394.2ENSG00000272888.11431.14110745.252500.941302.646901.58100K562U2AF1
AC013394.2ENSG00000272888.11124.83810769.849000.547006.679005.43860K562U2AF2
AC013394.2ENSG00000272888.11003.806801285.71140-0.357103.105501.61340K562UBE2L3
AC013394.2ENSG00000272888.1848.89640548.678700.629509.194007.97890K562UPF1
AC013394.2ENSG00000272888.1592.62750469.487800.335902.072801.31660K562WDR3
AC013394.2ENSG00000272888.1604.64560488.207700.308502.359801.57370K562WDR43
AC013394.2ENSG00000272888.1646.41050409.003900.660203.011701.35100K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AC013394.2 is not available on ENCORE database.





10 RBPs can affect the splicing of AC013394.2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAC013394.2ENSG00000272888.1chr15+9342681493427008934262449342641693428744934288140.412000.000000.00000includedK562PRPF8
SEAC013394.2ENSG00000272888.1chr15+9342681493427008934262449342641693428744934288140.192000.000380.04662includedK562FMR1
SEAC013394.2ENSG00000272888.1chr15+9342681493427008934262449342641693428744934288140.277000.000000.00000includedK562AQR
SEAC013394.2ENSG00000272888.1chr15+9342681493427008934262449342641693428744934288140.345000.000000.00015includedK562SUPV3L1
SEAC013394.2ENSG00000272888.1chr15+9343141493431544934293989342948493435233934353020.088000.000350.02824includedHepG2FTO
SEAC013394.2ENSG00000272888.1chr15+9342681493427008934262449342641693428744934288140.455000.000000.00000includedK562EFTUD2
SEAC013394.2ENSG00000272888.1chr15+9342681493427008934262449342641693428744934288140.358000.000010.00276includedHepG2PCBP2
SEAC013394.2ENSG00000272888.1chr15+9343141493431544934293989342948493435233934353020.055000.000000.00048includedK562TARDBP
SEAC013394.2ENSG00000272888.1chr15+9342681493427008934262449342641693428744934288140.227000.000040.00302includedK562TARDBP
SEAC013394.2ENSG00000272888.1chr15+934268149342700893426244934264169342874493428814-0.121000.002450.05500excludedK562AGGF1
SEAC013394.2ENSG00000272888.1chr15+9342681493427008934262449342641693428744934288140.214000.000080.00222includedK562HNRNPC
A3SSAC013394.2ENSG00000272888.1chr15+9342937493429452934293989342945293428601934288140.208000.000000.00000longerK562AQR
A5SSAC013394.2ENSG00000272888.1chr15+934259369342641693425936934259919342874493428814-0.157000.003150.04924shorterK562AQR
MXEAC013394.2ENSG00000272888.1chr15+93428744934288149342939893429484934269739342700893435233934352640.105000.000190.002101includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AC013394.2 is not avaliable on ENCORE database.