PDXK

General Information

Gene Name       : PDXK
Gene ID             : ENSG00000160209.18
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: PDXK)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PDXKENSG00000160209.1815.3636.1225.74ENCSR000AEF
HepG2PDXKENSG00000160209.18127.9581.30104.62ENCSR985KAT
K562PDXKENSG00000160209.1861.2954.2057.75ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PDXK is not avaliable on ENCORE database.



Proteins bound to RNA
  • PDXK RNA is bound by 48 proteins.  







eCLIP assay for PDXK is not avaliable on ENCORE database.





48 proteins are bound to PDXK RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr214517797045178034+3'-UTR6.1028949.64214K562UPF1
chr214518007945180126+3'-UTR3.8703879.86303K562UPF1
chr214517751645177581+3'-UTR4.3584013.16898HepG2UPF1
chr214517794345177970+3'-UTR4.4041227.47592K562UPF1
chr214517985545179917+3'-UTR4.6613823.14306HepG2XPO5
chr214517685745176904+3'-UTR4.2681121.16246K562UPF1
chr214517876745178786+3'-UTR3.462477.87801K562UPF1
chr214517694845176962+3'-UTR4.098873.08342HepG2AKAP1
chr214518170645181766+3'-UTR4.177373.10243K562SLTM
chr214517622745176278+3'-UTR3.418713.25727K562METAP2
chr214517710345177237+3'-UTR3.849919.90717HepG2AKAP1
chr214515711145157170+3'-UTR,intron-Distal3.031354.07062HepG2CSTF2T
chr214517621645176304+3'-UTR3.735016.16249HepG2RBM15
chr214517831445178352+3'-UTR3.7905312.47309K562UPF1
chr214517690545176979+3'-UTR5.7787113.08346HepG2UPF1
chr214518007145180079+3'-UTR3.8229657.64294K562UPF1
chr214517589445175999+3'-UTR,CDS3.201977.64948HepG2PPIG
chr214517698945177058+3'-UTR3.608006.21364HepG2AKAP1
chr214517634845176386+3'-UTR4.4628216.64138K562UPF1
chr214517713945177230+3'-UTR3.9832012.05023HepG2UPF1
chr214517789045177924+3'-UTR4.3340945.73035K562UPF1
chr214517690745176969+3'-UTR4.009186.09000K562AKAP1
chr214517805045178100+3'-UTR4.4341815.39446K562UPF1
chr214517752145177574+3'-UTR4.3678728.88928K562UPF1
chr214517889745178918+3'-UTR3.535698.16191K562UPF1
chr214517710545177273+3'-UTR5.0085650.90528K562UPF1
chr214517788045177890+3'-UTR4.2537027.15757K562UPF1
chr214517858445178651+3'-UTR3.300916.00087K562YBX3
chr214517635645176391+3'-UTR3.221354.76929K562FAM120A
chr214517649145176570+3'-UTR3.8088030.25344K562UPF1
chr214518074345180784+3'-UTR4.5378216.30024K562UPF1
chr214517605145176104+3'-UTR4.405444.94901HepG2HNRNPC
chr214517849145178538+3'-UTR5.8795626.99639K562UPF1
chr214517905245179112+3'-UTR3.220675.10305K562AKAP1
chr214517910445179147+3'-UTR4.8479615.52312K562UPF1
chr214517731245177369+3'-UTR5.028907.79013HepG2AKAP1
chr214517733145177346+3'-UTR4.565004.93188HepG2UPF1
chr214517624145176292+3'-UTR4.4247616.22320K562UPF1
chr214517751645177572+3'-UTR5.0767211.68253K562AKAP1
chr214517605345176100+3'-UTR3.856443.04397HepG2TIA1
chr214517622845176288+3'-UTR3.272626.01711K562CSTF2T
chr214517633945176400+3'-UTR5.015328.60994HepG2AKAP1
chr214517679545176848+3'-UTR5.0250527.89089K562UPF1
chr214517930045179340+3'-UTR5.6628321.16018K562UPF1
chr214517709745177145+3'-UTR3.504196.96027K562AKAP1
chr214518204145182103+3'-UTR3.029383.18660HepG2PABPN1
chr214517605845176111+3'-UTR4.2337913.34152K562TIA1
chr214517929245179344+3'-UTR3.768384.40370K562AKAP1
chr214517622745176287+3'-UTR3.604436.54247K562NONO
chr214517905345179126+3'-UTR3.586246.60798HepG2UPF1
chr214517760145177646+3'-UTR3.7532413.06694K562UPF1
chr214518053345180578+3'-UTR3.6077913.66940K562UPF1
chr214517673545176795+3'-UTR4.5351226.37805K562UPF1
chr214517673045176790+3'-UTR4.0539711.66255HepG2UPF1
chr214515745845157609+3'-UTR,intron-Distal,intron-Proximal5.9913913.02800K562SLTM
chr214518086745180995+3'-UTR3.6696316.39442K562PUM2
chr214517700145177039+3'-UTR4.607428.40136K562AKAP1
chr214518006945180132+3'-UTR4.343716.32738K562HNRNPC
chr214518148845181541+3'-UTR3.327425.28657K562RBM15
chr214518099745181045+3'-UTR4.318703.67707K562METAP2
chr214518210545182157+3'-UTR3.885065.35091K562PUM2
chr214517716945177222+3'-UTR3.5446510.05486K562AKAP1
chr214517701545177062+3'-UTR4.4025019.41819K562UPF1
chr214517959245179637+3'-UTR3.236833.48322HepG2UPF1
chr214517621745176302+3'-UTR3.623747.67822HepG2PRPF4
chr214518060645180645+3'-UTR4.125495.08521K562GEMIN5
chr214517592145176028+3'-UTR,CDS3.425349.59989HepG2LARP4
chr214517905645179104+3'-UTR4.7416722.76666K562UPF1
chr214517697945177049+3'-UTR3.598259.77656HepG2UPF1
chr214517792445177943+3'-UTR3.7058626.85158K562UPF1
chr214518059245180644+3'-UTR3.2661614.59169K562UPF1
chr214518140645181481+3'-UTR3.643814.21638K562SLTM
chr214517619745176341+3'-UTR3.8515021.21483HepG2UPF1
chr214516132745161393+5'-UTR,intron-Distal4.788873.99130HepG2FAM120A
chr214513901145139067+5'-UTR3.972556.98150K562DDX3X
chr214513912545139255+5'-UTR,CDS4.1079822.62814K562DDX3X
chr214516133545161385+5'-UTR,intron-Distal4.486855.16036HepG2CSTF2T
chr214513904245139127+5'-UTR3.8123434.48649HepG2DDX3X
chr214516142245161515+5'-UTR,CDS,intron-Distal,intron-Proximal3.907739.07337HepG2FAM120A
chr214513912745139196+5'-UTR,CDS4.8806438.14323HepG2DDX3X
chr214514881345148857+5'-UTR,intron-Distal4.638516.32277HepG2CSTF2T
chr214514881545148881+5'-UTR,intron-Distal4.361524.84226K562NONO
chr214517247345172512+CDS,intron-Proximal3.208454.94451K562FMR1
chr214517250345172560+CDS,intron-Proximal3.842687.87148HepG2PRPF8
chr214516362245163691+CDS,intron-Distal,intron-Proximal3.436023.54552HepG2LARP4
chr214516884045168913+CDS,intron-Proximal3.783367.87148HepG2PRPF8
chr214517248745172551+CDS,intron-Proximal4.314046.48405K562AQR
chr214516143345161538+CDS,intron-Distal,intron-Proximal4.1565416.22306HepG2CSTF2T
chr214516590445165971+CDS,intron-Proximal4.6522322.72113K562SF3B4
chr214516590745165970+CDS,intron-Proximal4.285725.56912HepG2AQR
chr214517038045170393+CDS,intron-Proximal3.153734.12887HepG2GRWD1
chr214516598445165999+CDS3.347654.63311K562AQR
chr214517036845170428+CDS,intron-Proximal4.414003.63055K562ZNF800
chr214516597045166038+CDS,intron-Proximal3.650995.99700HepG2AQR
chr214517234245172417+CDS,intron-Proximal3.002755.12902K562SF3B4
chr214516893745168962+CDS,intron-Proximal4.639045.85983HepG2GRWD1
chr214517247445172512+CDS,intron-Proximal3.514597.15529HepG2PPIG
chr214517357545173645+CDS,intron-Proximal4.379548.11807HepG2PRPF8
chr214513923345139299+CDS,intron-Proximal3.7770813.01942HepG2PRPF8
chr214517037945170412+CDS,intron-Proximal3.3932012.38664HepG2PPIG
chr214516887245168911+CDS,intron-Proximal4.147446.36347HepG2PPIG
chr214517339245173491+CDS,intron-Proximal3.652284.57180HepG2AQR
chr214516368245163732+CDS,intron-Distal,intron-Proximal3.867005.44908K562SF3B4
chr214516162045161652+CDS4.797644.97342HepG2PPIG
chr214515395345153971+CDS4.073673.20743HepG2PPIG
chr214516365945163731+CDS,intron-Distal,intron-Proximal4.4605619.01042HepG2PRPF8
chr214516151645161589+CDS,intron-Proximal3.408274.80460HepG2AQR
chr214516361345163716+CDS,intron-Distal,intron-Proximal3.703767.43070K562DDX24
chr214517552945175585+CDS,intron-Proximal5.8775310.98510K562SF3B4
chr214516885145168962+CDS,intron-Proximal3.199466.53290HepG2BUD13
chr214517042245170499+CDS,intron-Proximal4.077677.79506K562AQR
chr214516884045168931+CDS,intron-Proximal4.3782618.42530K562AQR
chr214516360245163756+CDS,intron-Distal,intron-Proximal3.4178520.05125HepG2PPIG
chr214513925045139256+CDS3.400596.80152K562YBX3
chr214516368745163691+CDS,intron-Distal,intron-Proximal5.0453317.18244K562AQR
chr214516592845165984+CDS,intron-Proximal3.382697.85418K562AQR
chr214516891145168962+CDS,intron-Proximal3.3916410.37782HepG2PPIG
chr214516594545166029+CDS,intron-Proximal4.7597415.51998HepG2PRPF8
chr214517347445173596+CDS3.050014.05119HepG2UCHL5
chr214517241245172474+CDS3.668659.47710HepG2PPIG
chr214516366945163757+CDS,intron-Distal,intron-Proximal4.2087819.28690HepG2EFTUD2
chr214517558245175616+CDS3.069034.68592HepG2PPIG
chr214516163945161702+CDS,intron-Proximal3.7205310.86331HepG2PRPF8
chr214517583045175894+CDS,intron-Proximal3.273217.38162HepG2PPIG
chr214516366545163733+CDS,intron-Distal,intron-Proximal3.6978911.02804K562BUD13
chr214517561645175645+CDS4.047298.40792HepG2PPIG
chr214517340745173465+CDS,intron-Proximal3.231237.38503K562SF3B4
chr214517035545170475+CDS,intron-Proximal3.5621719.99555HepG2PRPF8
chr214516591445166028+CDS,intron-Proximal3.013668.81110K562BUD13
chr214517039345170417+CDS3.146593.92610HepG2GRWD1
chr214517558245175644+CDS5.578286.53290K562DDX24
chr214513921445139224+CDS3.511697.86995K562YBX3
chr214516599945166022+CDS,intron-Proximal5.3713313.23057K562AQR
chr214513922445139250+CDS3.139387.42778K562YBX3
chr214516591245165975+CDS,intron-Proximal3.305698.20183HepG2EFTUD2
chr214516413445164195+intron-Distal3.565978.98803K562SAFB
chr214516035545160401+intron-Distal3.937416.85787HepG2CSTF2T
chr214516390045163947+intron-Distal3.306515.59104K562BUD13
chr214515456145154609+intron-Distal3.008454.51156HepG2CSTF2T
chr214514856745148713+intron-Distal3.624219.48128HepG2FAM120A
chr214514697045147047+intron-Distal4.5567416.34221K562EIF4G2
chr214516439645164457+intron-Distal3.131703.47308HepG2TAF15
chr214514828045148348+intron-Distal3.100053.90966K562CSTF2T
chr214516373145163761+intron-Distal,intron-Proximal4.317885.47926K562AQR
chr214516411545164127+intron-Distal4.927286.02367K562GTF2F1
chr214513999245140077+intron-Distal4.930515.80843K562CSTF2T
chr214515447045154549+intron-Distal4.705616.40665K562NONO
chr214515449145154538+intron-Distal3.951663.48722HepG2PRPF4
chr214516410845164172+intron-Distal3.9851736.16694HepG2EFTUD2
chr214513984845139929+intron-Distal3.611383.23171K562FUS
chr214513959545139640+intron-Distal3.389743.74491K562CSTF2T
chr214517075545170818+intron-Distal3.214553.13437HepG2IGF2BP1
chr214514853645148687+intron-Distal3.977484.14602K562FUS
chr214514828045148342+intron-Distal4.538174.72743K562NONO
chr214514803645148050+intron-Distal4.551924.19739K562EIF4G2
chr214516034745160395+intron-Distal4.301644.83789HepG2FAM120A
chr214515410445154156+intron-Distal4.553146.80961HepG2EFTUD2
chr214517330445173364+intron-Distal4.323283.97974HepG2RBFOX2
chr214516410945164178+intron-Distal3.3021112.96309K562EFTUD2
chr214515977745159850+intron-Distal4.048856.99039HepG2CSTF2T
chr214515531445155444+intron-Distal4.197147.19956K562EWSR1
chr214517062745170726+intron-Distal7.1027715.34311K562AATF
chr214517198945172030+intron-Distal5.9771931.83983K562EIF4G2
chr214516083945160926+intron-Distal,intron-Proximal5.9433715.90230HepG2CSTF2T
chr214516871945168810+intron-Distal,intron-Proximal6.156427.02785HepG2SF3A3
chr214514002445140063+intron-Distal3.582193.68836HepG2FKBP4
chr214514827745148369+intron-Distal3.466334.72468HepG2FAM120A
chr214516411345164174+intron-Distal4.855677.26158K562TAF15
chr214514698545147041+intron-Distal3.322546.36668HepG2CSTF2T
chr214517066945170719+intron-Distal5.639218.89307HepG2DKC1
chr214516369145163730+intron-Distal,intron-Proximal5.2947920.81366K562AQR
chr214514828645148363+intron-Distal3.890686.29987K562EWSR1
chr214516854945168656+intron-Distal4.6633213.53114HepG2PCBP2
chr214515411045154169+intron-Distal4.383324.48497K562NONO
chr214515489045154939+intron-Distal4.205614.33692K562NONO
chr214514756445147663+intron-Distal3.200693.90917HepG2PRPF4
chr214513948345139526+intron-Distal3.909566.96229HepG2CSTF2T
chr214516874545168832+intron-Distal,intron-Proximal4.3924225.32882K562SF3B4
chr214514058345140663+intron-Distal3.535223.04470K562FUS
chr214516411845164164+intron-Distal3.541285.77496K562DDX24
chr214516410045164160+intron-Distal3.395798.99043HepG2CSTF2T
chr214517227945172331+intron-Distal,intron-Proximal3.700714.01646K562SF3B4
chr214516408245164167+intron-Distal3.980708.06836K562SLTM
chr214516410545164176+intron-Distal4.374594.52383K562FUS
chr214514801345148068+intron-Distal3.156405.59719HepG2CSTF2T
chr214515463445154663+intron-Distal3.040313.00221HepG2CSTF2T
chr214514782845147951+intron-Distal4.4928618.11929HepG2XPO5
chr214516955345169687+intron-Distal3.137503.30948HepG2PRPF4
chr214516876545168872+intron-Distal,intron-Proximal5.557258.63731HepG2SF3B4
chr214516412745164180+intron-Distal4.441518.27103K562GTF2F1
chr214514698045147051+intron-Distal4.181093.27582HepG2SFPQ
chr214514666445146811+intron-Distal5.5728913.42527K562TARDBP
chr214515327545153351+intron-Distal4.300574.48935K562CSTF2T
chr214515409645154170+intron-Distal,intron-Proximal4.803924.70436K562EWSR1
chr214515488345154955+intron-Distal3.008094.53878K562CSTF2T
chr214515409345154164+intron-Distal,intron-Proximal3.836676.88653K562CSTF2T
chr214516437945164459+intron-Distal3.266524.87953K562FUS
chr214514188345141966+intron-Distal,intron-Proximal4.054054.04290K562CSTF2T
chr214513945745139535+intron-Distal4.442574.23759K562NONO
chr214514865245148703+intron-Distal3.739165.16186K562NONO
chr214515089745151015+intron-Distal3.226144.00440HepG2ILF3
chr214513995845140036+intron-Distal3.631543.04470K562FUS
chr214514035445140439+intron-Distal4.354519.79356K562CSTF2T
chr214516375745163853+intron-Distal,intron-Proximal3.3044318.97989HepG2EFTUD2
chr214515193545152007+intron-Distal,intron-Proximal4.834496.27794HepG2SF3A3
chr214516072445160781+intron-Distal4.1053512.22722HepG2CSTF2T
chr214516411745164124+intron-Distal3.6076810.34631HepG2PRPF4
chr214514059845140706+intron-Distal3.692469.03756K562CSTF2T
chr214514686445146951+intron-Distal3.938755.96179HepG2DKC1
chr214513982045139872+intron-Distal3.544597.93684HepG2CSTF2T
chr214513976245139820+intron-Distal4.5199910.62681HepG2CSTF2T
chr214514763845147680+intron-Distal4.095583.80314K562CSTF2T
chr214514681745146931+intron-Distal3.474974.88492HepG2IGF2BP1
chr214516505045165072+intron-Distal4.330104.10529HepG2SRSF9
chr214515408845154171+intron-Distal,intron-Proximal5.9775416.92618HepG2CSTF2T
chr214517075545170817+intron-Distal4.496008.30477K562EIF4G2
chr214514829445148361+intron-Distal3.423813.89652HepG2SFPQ
chr214517200045172047+intron-Distal3.155843.61506K562NONO
chr214517074745170819+intron-Distal4.902387.88729K562TARDBP
chr214514763145147683+intron-Distal3.359025.36249HepG2CSTF2T
chr214515408945154185+intron-Distal,intron-Proximal4.181827.20259K562GTF2F1
chr214517203045172056+intron-Distal6.1794024.64208K562EIF4G2
chr214513943645139514+intron-Distal4.200694.79286HepG2PRPF4
chr214514860645148671+intron-Distal3.879353.86417HepG2PRPF4
chr214516449245164531+intron-Distal4.552155.02679K562BUD13
chr214516389845163972+intron-Distal3.313223.66704K562TAF15
chr214517300945173213+intron-Distal5.190457.26171HepG2GTF2F1
chr214514188845142010+intron-Distal4.3097911.27213HepG2RBFOX2
chr214515406745154164+intron-Distal,intron-Proximal5.271268.41677HepG2GTF2F1
chr214516411745164165+intron-Distal3.023297.37580K562DROSHA
chr214516073745160814+intron-Distal4.300404.36078K562GTF2F1
chr214514057645140673+intron-Distal3.522106.71630HepG2PRPF4
chr214516072145160782+intron-Distal3.144343.01436K562CSTF2T
chr214515406145154171+intron-Distal,intron-Proximal3.998714.12910K562DROSHA
chr214516372445163779+intron-Distal,intron-Proximal3.190866.49379K562EFTUD2
chr214514037845140432+intron-Distal4.112493.58113K562EWSR1
chr214517228845172306+intron-Distal,intron-Proximal4.790955.59072K562EIF4G2
chr214516371345163780+intron-Distal,intron-Proximal3.1969810.90434HepG2BUD13
chr214513928545139392+intron-Distal,intron-Proximal3.827199.56233HepG2EFTUD2
chr214514681145146921+intron-Distal5.3653810.51183K562TARDBP
chr214514757445147629+intron-Distal5.636899.50986K562EIF4G2
chr214514697745147075+intron-Distal3.249533.77853HepG2IGF2BP1
chr214515407945154192+intron-Distal,intron-Proximal6.3754619.53414HepG2FAM120A
chr214517081945170909+intron-Distal5.3128910.51183K562TARDBP
chr214514826945148360+intron-Distal3.601333.15856K562FUS
chr214515446945154543+intron-Distal3.396433.67595K562EWSR1
chr214516411445164154+intron-Distal3.011483.90817K562AGGF1
chr214514673545146847+intron-Distal5.234917.70656HepG2DKC1
chr214514868445148745+intron-Distal4.462814.38204HepG2SFPQ
chr214514813245148189+intron-Distal4.229723.58113K562EWSR1
chr214514861545148715+intron-Distal4.4421418.65154HepG2CSTF2T
chr214516083645160930+intron-Distal,intron-Proximal3.658354.50953K562CSTF2T
chr214514022045140331+intron-Distal4.099678.45389K562CSTF2T
chr214515406345154175+intron-Distal,intron-Proximal5.0092317.55099HepG2PRPF4
chr214514200745142091+intron-Distal3.252114.14880HepG2CSTF2T
chr214515484545154943+intron-Distal3.688915.10737K562EWSR1
chr214516412045164166+intron-Distal3.922067.25346K562UCHL5
chr214517064545170725+intron-Distal6.5210017.42881K562EIF4G2
chr214516411645164134+intron-Distal3.200826.56315K562SAFB
chr214514685445146935+intron-Distal6.5697419.42400K562EIF4G2
chr214517181745171913+intron-Distal4.7170013.42605K562EIF4G2
chr214516412445164164+intron-Distal3.5301711.25850HepG2PRPF4
chr214515534545155435+intron-Distal3.273695.06168K562SLTM
chr214517304545173168+intron-Distal4.964625.23961K562GTF2F1
chr214516390345163999+intron-Distal3.745626.16126K562TARDBP
chr214514024445140296+intron-Distal5.129087.60000HepG2CSTF2T
chr214515410945154170+intron-Distal4.092634.23094K562TIA1
chr214517084945170993+intron-Distal4.8115225.85155K562EIF4G2
chr214517191645171989+intron-Distal4.9956911.93667K562EIF4G2
chr214514212845142203+intron-Distal3.973583.37414K562CSTF2T
chr214517058645170745+intron-Distal5.9563117.20349K562TARDBP
chr214514853045148575+intron-Distal4.741367.09999HepG2CSTF2T
chr214516085945160916+intron-Distal3.095924.90312HepG2FAM120A
chr214516372245163768+intron-Distal,intron-Proximal3.337694.55636HepG2PRPF4
chr214515370645153745+intron-Distal4.181153.53896K562NONO
chr214514056945140683+intron-Distal4.705646.11395HepG2GTF2F1
chr214514770445147759+intron-Distal3.256375.43093HepG2CSTF2T
chr214514000145140072+intron-Distal3.601959.32095HepG2CSTF2T
chr214516411645164158+intron-Distal4.425934.70962HepG2GTF2F1
chr214516085445160930+intron-Distal,intron-Proximal4.637515.55667K562EWSR1
chr214514913045149176+intron-Distal3.240154.88713HepG2CSTF2T
chr214517199145172063+intron-Distal5.299889.98081K562TARDBP
chr214513934445139395+intron-Distal,intron-Proximal3.968116.48652HepG2CSTF2T
chr214516540645165468+intron-Distal4.246474.39671K562TAF15
chr214513943345139483+intron-Distal4.7215910.15405HepG2CSTF2T
chr214514011045140156+intron-Distal3.553556.73713HepG2CSTF2T
chr214516166245161706+intron-Proximal3.860594.00320K562AQR
chr214515386945153933+intron-Proximal4.709709.18646HepG2SF3A3
chr214516602845166095+intron-Proximal5.050976.92353K562BUD13
chr214516881045168873+intron-Proximal5.238168.73870HepG2SF3A3
chr214516602245166068+intron-Proximal4.9971012.86643K562AQR
chr214516603045166104+intron-Proximal4.485298.11807HepG2PRPF8
chr214517046445170519+intron-Proximal4.967838.79061HepG2EFTUD2
chr214515387645153949+intron-Proximal4.8267113.31927HepG2SF3B4
chr214516165245161662+intron-Proximal3.603314.00320K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PDXK is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PDXK is not available on ENCORE database.

  • 109 RBPs can affect the levels of PDXK.  








The Knockdown/knockout RNA-Seq assay for PDXK is not available on ENCORE database.





109 RBPs can affect the gene expression of PDXK :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PDXKENSG00000160209.141347.937801723.36970-0.354502.991801.88310HepG2AATF
PDXKENSG00000160209.142210.553203130.31130-0.5019013.6616012.52730HepG2ACO1
PDXKENSG00000160209.142145.837804220.48340-0.9759014.6153013.49200HepG2AKAP1
PDXKENSG00000160209.142591.947203144.78730-0.278904.161203.23380HepG2AKAP8L
PDXKENSG00000160209.142084.925503491.92960-0.7440010.520109.06060HepG2ASCC1
PDXKENSG00000160209.144162.252603591.410200.212702.993402.28370HepG2AUH
PDXKENSG00000160209.141619.926001193.838200.440202.659202.07150HepG2BOP1
PDXKENSG00000160209.141207.170001500.52730-0.313802.709201.94550HepG2CALR
PDXKENSG00000160209.142094.959003129.35310-0.5789014.8171013.53260HepG2CKAP4
PDXKENSG00000160209.141990.978901539.989700.370504.969803.60730HepG2YBX3
PDXKENSG00000160209.141153.304301765.22360-0.614103.954702.22140HepG2CSTF2T
PDXKENSG00000160209.143267.849302913.961300.165302.239901.56270HepG2DAZAP1
PDXKENSG00000160209.142462.943102894.96170-0.233203.557902.62750HepG2DDX19B
PDXKENSG00000160209.141503.509701899.77030-0.337502.890302.19830HepG2DDX21
PDXKENSG00000160209.141430.383201860.42190-0.379203.845502.75700HepG2DDX24
PDXKENSG00000160209.141385.442701887.66190-0.446303.816502.92340HepG2DDX55
PDXKENSG00000160209.144605.788603473.471200.407003.121302.46840HepG2DDX6
PDXKENSG00000160209.141879.184401458.475700.365503.388202.30880HepG2DHX30
PDXKENSG00000160209.142359.774802994.78780-0.343805.941605.01950HepG2DKC1
PDXKENSG00000160209.141336.903101822.75390-0.447202.981402.02660HepG2EEF2
PDXKENSG00000160209.141020.152201519.21470-0.574504.990903.50280HepG2EFTUD2
PDXKENSG00000160209.141198.080001750.54980-0.547104.118502.75400HepG2AGO1
PDXKENSG00000160209.144251.448603338.299000.348702.809002.21070HepG2EIF2S1
PDXKENSG00000160209.141584.407302005.60060-0.340103.523602.20370HepG2EIF2S2
PDXKENSG00000160209.141138.450101479.47480-0.378002.495401.63240HepG2EIF3D
PDXKENSG00000160209.141302.937101794.92720-0.462205.119003.70630HepG2EIF3G
PDXKENSG00000160209.142782.815303592.34330-0.368402.145901.53760HepG2EIF4B
PDXKENSG00000160209.143923.577502753.886200.510606.329705.12100HepG2EIF4G2
PDXKENSG00000160209.141769.888402290.42810-0.372003.766202.50330HepG2ESF1
PDXKENSG00000160209.143013.287604123.47500-0.4525011.1647010.08790HepG2ETF1
PDXKENSG00000160209.141731.130502670.28900-0.625306.428805.30270HepG2FIP1L1
PDXKENSG00000160209.141547.748402119.49320-0.453502.699001.59560HepG2FUS
PDXKENSG00000160209.142587.477203453.05560-0.416303.469402.72820HepG2G3BP1
PDXKENSG00000160209.141004.992101317.22330-0.390302.834601.92480HepG2GEMIN5
PDXKENSG00000160209.141292.218302034.10330-0.654503.753702.12290HepG2HLTF
PDXKENSG00000160209.142271.231902678.02120-0.237702.827301.88490HepG2HNRNPA2B1
PDXKENSG00000160209.141340.680201698.11010-0.341002.831102.13070HepG2HNRNPC
PDXKENSG00000160209.142314.280501757.839400.396706.455705.42280HepG2HNRNPF
PDXKENSG00000160209.142821.979703498.02940-0.309802.665801.97980HepG2HNRNPK
PDXKENSG00000160209.141212.193201841.93490-0.603609.145107.58480HepG2HNRNPM
PDXKENSG00000160209.141469.458601686.88340-0.199101.923501.40920HepG2HNRNPU
PDXKENSG00000160209.142532.679501730.958900.549008.568507.36400HepG2IGF2BP1
PDXKENSG00000160209.142017.116003294.64680-0.707802.484201.55880HepG2IGF2BP3
PDXKENSG00000160209.142052.233002681.34800-0.385802.438001.66180HepG2LARP4
PDXKENSG00000160209.141434.395501913.29200-0.415603.953402.50410HepG2LIN28B
PDXKENSG00000160209.142806.571703724.37930-0.408203.575002.82880HepG2MAGOH
PDXKENSG00000160209.14938.704101548.26570-0.721905.151803.74540HepG2METAP2
PDXKENSG00000160209.141688.419402160.44290-0.355703.951402.98870HepG2MSI2
PDXKENSG00000160209.143776.649402135.457500.822503.209102.24880HepG2PABPC1
PDXKENSG00000160209.141202.600901669.72950-0.473508.038606.71490HepG2PARN
PDXKENSG00000160209.14813.646901223.52410-0.588604.692503.10510HepG2PKM
PDXKENSG00000160209.141412.716302108.80650-0.578003.683002.28580HepG2PRPF6
PDXKENSG00000160209.14679.163901455.56650-1.0997016.3347014.60100HepG2PRPF8
PDXKENSG00000160209.142484.372603482.09400-0.4871011.3630010.40240HepG2PTBP1
PDXKENSG00000160209.141948.677602928.02440-0.5874020.1557018.85310HepG2PUM1
PDXKENSG00000160209.142500.525902925.88270-0.226602.098101.50920HepG2PUM2
PDXKENSG00000160209.142410.644103188.38440-0.403409.288708.27110HepG2PUS1
PDXKENSG00000160209.142951.226203770.88230-0.353604.914204.11740HepG2QKI
PDXKENSG00000160209.141086.416101935.38480-0.833005.851204.85200HepG2RAVER1
PDXKENSG00000160209.142440.496303020.47700-0.307603.269902.34550HepG2RBM15
PDXKENSG00000160209.142132.659103446.45050-0.6925018.2519017.15660HepG2RBM22
PDXKENSG00000160209.141760.618402197.27910-0.319602.483301.54860HepG2RBM27
PDXKENSG00000160209.142565.964803875.11490-0.5947016.7297015.61490HepG2NELFE
PDXKENSG00000160209.142450.946403609.36310-0.5584013.8954012.67830HepG2RECQL
PDXKENSG00000160209.14808.452401439.79040-0.832608.173207.18290HepG2RPS19
PDXKENSG00000160209.141483.028802026.47350-0.450404.330003.33830HepG2RPS2
PDXKENSG00000160209.141613.764802068.58980-0.358202.946601.83690HepG2RPS5
PDXKENSG00000160209.14980.649001439.79640-0.554105.160604.11960HepG2RRP9
PDXKENSG00000160209.142141.899401502.246000.5117012.1851010.97940HepG2SAFB2
PDXKENSG00000160209.142207.983503162.13160-0.518203.788002.99390HepG2SF3A3
PDXKENSG00000160209.141554.210201173.277000.405502.163601.53460HepG2SF3B1
PDXKENSG00000160209.142806.596503625.04720-0.369206.949406.07900HepG2SF3B4
PDXKENSG00000160209.143421.809402644.755500.371509.151807.99250HepG2SLBP
PDXKENSG00000160209.141370.335501751.87570-0.354406.376105.46360HepG2SMN1
PDXKENSG00000160209.142138.431103783.87150-0.8233033.5126032.26590HepG2SRSF1
PDXKENSG00000160209.142350.775702723.39020-0.212302.453701.85970HepG2SRSF5
PDXKENSG00000160209.142215.512101727.057300.359205.346304.43190HepG2SRSF7
PDXKENSG00000160209.144117.124303379.678800.284705.098404.44380HepG2SSB
PDXKENSG00000160209.142232.324803097.24000-0.4724012.6388011.47410HepG2SUCLG1
PDXKENSG00000160209.141367.323301878.96080-0.458604.278503.46360HepG2SUPV3L1
PDXKENSG00000160209.141633.820503401.38800-1.0579036.4406034.70370HepG2TAF15
PDXKENSG00000160209.141813.120402891.07290-0.673102.533501.50890HepG2TBRG4
PDXKENSG00000160209.141907.048001639.133600.218301.747701.33090HepG2TIAL1
PDXKENSG00000160209.141951.906801653.774300.239002.878402.30640HepG2TRIM56
PDXKENSG00000160209.141577.735802283.85180-0.533603.297202.61670HepG2U2AF1
PDXKENSG00000160209.14885.631901558.73480-0.815602.246501.36770HepG2U2AF2
PDXKENSG00000160209.142345.810402882.41920-0.297204.213402.95350HepG2UTP18
PDXKENSG00000160209.141811.571802707.46450-0.5797015.3270014.08750HepG2UTP3
PDXKENSG00000160209.141388.017601904.27520-0.456202.612201.39180HepG2XRCC5
PDXKENSG00000160209.141371.778002129.03430-0.634204.454403.12470HepG2XRCC6
PDXKENSG00000160209.142580.582803084.22130-0.257204.834204.16250HepG2ZNF622
PDXKENSG00000160209.141569.557001082.119800.536405.367304.14050K562BOP1
PDXKENSG00000160209.142944.363502447.450100.266602.475201.49260K562DDX3X
PDXKENSG00000160209.142276.123602746.30150-0.270903.728702.98740K562DDX47
PDXKENSG00000160209.143024.552102481.373000.285503.509801.98840K562DDX6
PDXKENSG00000160209.143234.038102688.236800.266603.661302.25050K562EIF2S1
PDXKENSG00000160209.142965.553502040.125100.539504.562003.19480K562EIF3D
PDXKENSG00000160209.143375.688302556.952900.400704.394603.36040K562EIF4A3
PDXKENSG00000160209.142710.086302302.647700.234902.406501.35160K562EIF4B
PDXKENSG00000160209.14655.657901244.24670-0.924309.434707.97580K562G3BP2
PDXKENSG00000160209.141416.980301098.493800.367203.139502.29650K562GPKOW
PDXKENSG00000160209.142943.012901983.804100.568904.835003.31520K562IGF2BP2
PDXKENSG00000160209.142952.599402083.660700.502805.841904.60500K562MAGOH
PDXKENSG00000160209.142716.704302079.245200.385703.768302.67770K562MATR3
PDXKENSG00000160209.141328.852701072.262100.309402.476301.65190K562METAP2
PDXKENSG00000160209.143180.924002462.331600.369307.370506.10560K562MTPAP
PDXKENSG00000160209.142696.398902037.357100.404204.352302.62540K562PCBP1
PDXKENSG00000160209.143063.906104273.97780-0.480206.572804.51030K562PNPT1
PDXKENSG00000160209.142394.327801971.212000.280402.158001.43820K562PPIG
PDXKENSG00000160209.143074.077002024.499500.6025010.493909.25890K562PTBP1
PDXKENSG00000160209.144052.062504827.51390-0.252602.852401.76800K562PUM1
PDXKENSG00000160209.142703.569501940.576300.478303.542402.58490K562RBM22
PDXKENSG00000160209.142531.438301892.209800.419803.802102.08330K562RBM34
PDXKENSG00000160209.143519.267102699.608000.382406.443105.24080K562SF3A3
PDXKENSG00000160209.141867.697401293.421600.530007.876506.39090K562SF3B4
PDXKENSG00000160209.14874.478401228.00510-0.489804.770902.52390K562SND1
PDXKENSG00000160209.143199.176702765.807000.209902.870401.91990K562SRPK2
PDXKENSG00000160209.142756.595001984.823600.473804.677403.76250K562SRSF1
PDXKENSG00000160209.142423.580301874.860800.370302.799101.74320K562SRSF5
PDXKENSG00000160209.14814.915901221.34350-0.583702.821001.34410K562TAF15
PDXKENSG00000160209.142625.570702008.471200.386402.883602.16200K562TARDBP
PDXKENSG00000160209.142747.722701937.476100.504007.051405.64890K562TIA1
PDXKENSG00000160209.142571.532701901.949900.435004.251202.84910K562TRA2A
PDXKENSG00000160209.143488.594502900.900600.266004.249603.37790K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PDXK is not available on ENCORE database.





10 RBPs can affect the splicing of PDXK :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPDXKENSG00000160209.14chr21+451520194515232345148797451488914515394945154004-0.557000.000480.01479excludedHepG2HNRNPK
SEPDXKENSG00000160209.14chr21+451520194515232345148797451488914515394945154004-0.463000.000080.00840excludedHepG2AKAP1
SEPDXKENSG00000160209.14chr21+4515201945152528451390574513926245153949451540040.051000.000340.00487includedK562AQR
SEPDXKENSG00000160209.14chr21+451659594516600645163604451636884516887545168961-0.097000.000190.00581excludedK562U2AF1
SEPDXKENSG00000160209.14chr21+451635494516368845161547451616524516595945166006-0.071000.000340.01051excludedHepG2SRSF1
SEPDXKENSG00000160209.14chr21+4515201945152323451487974514889145153949451540040.632000.000060.01225includedHepG2SSB
SEPDXKENSG00000160209.14chr21+451520194515252845148780451488914515394945154004-0.528000.000860.05858excludedHepG2IGF2BP3
SEPDXKENSG00000160209.14chr21+451659594516600645163604451636884516887545168961-0.135000.000010.00033excludedK562U2AF2
SEPDXKENSG00000160209.14chr21+451659594516600645163604451636884516887545168961-0.051000.000380.06548excludedK562NPM1
MXEPDXKENSG00000160209.14chr21+45163549451636884516595945166006451615474516165245168875451689610.127000.004290.049361includedK562U2AF2
MXEPDXKENSG00000160209.14chr21+45163549451636884516595945166006451615474516165245168875451689610.110000.007520.089191includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PDXK is not avaliable on ENCORE database.