VCP

General Information

Gene Name       : VCP
Gene ID             : ENSG00000165280.15
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: VCP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878VCPENSG00000165280.15127.40164.09145.75ENCSR000AEF
HepG2VCPENSG00000165280.15295.97207.67251.82ENCSR985KAT
K562VCPENSG00000165280.15186.88140.42163.65ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for VCP is not avaliable on ENCORE database.



Proteins bound to RNA
  • VCP RNA is bound by 37 proteins.  







eCLIP assay for VCP is not avaliable on ENCORE database.





37 proteins are bound to VCP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr93505658035056698-3'-UTR,intron-Distal7.4138323.38887HepG2SUB1
chr93505660935056696-3'-UTR,intron-Distal4.761617.09454K562NOLC1
chr93506824735068271-3'-UTR,CDS,intron-Distal,intron-Proximal3.630236.57537HepG2G3BP1
chr93505701235057114-3'-UTR,intron-Distal,intron-Proximal3.7425223.79800HepG2SUB1
chr93505680235056845-3'-UTR,intron-Distal,intron-Proximal4.1969615.86474HepG2SUB1
chr93506822735068279-3'-UTR,CDS,intron-Distal,intron-Proximal4.332274.27476HepG2AQR
chr93505678735056893-3'-UTR,intron-Distal,intron-Proximal3.868455.90082HepG2AKAP1
chr93505664735056697-3'-UTR,intron-Distal4.053286.24385K562PUM2
chr93505699535057115-3'-UTR,intron-Distal,intron-Proximal5.4212420.95168HepG2UPF1
chr93506833835068357-3'-UTR,CDS,intron-Distal5.922498.17243K562RPS3
chr93505687235056927-3'-UTR,intron-Distal3.9707812.91015K562PABPC4
chr93505706535057120-3'-UTR,CDS,intron-Distal,intron-Proximal4.1423617.44235K562RPS3
chr93506820735068257-3'-UTR,CDS,intron-Distal,intron-Proximal5.7386611.80896HepG2PRPF8
chr93505705235057128-3'-UTR,CDS,intron-Distal,intron-Proximal3.7982010.11268HepG2DDX55
chr93506803035068091-3'-UTR,CDS,intron-Distal,intron-Proximal3.039794.20336HepG2AQR
chr93505707935057129-3'-UTR,CDS,intron-Distal,intron-Proximal3.108285.82813K562PABPC4
chr93505678135056831-3'-UTR,intron-Distal,intron-Proximal4.158926.14390K562PABPC4
chr93505696335057061-3'-UTR,intron-Distal5.2478425.52737HepG2G3BP1
chr93505660835056712-3'-UTR,intron-Distal3.112255.65964K562UPF1
chr93505686235056936-3'-UTR,intron-Distal,intron-Proximal3.337855.44101K562UPF1
chr93506833535068418-3'-UTR,CDS,intron-Distal,intron-Proximal4.0081011.39563HepG2SF3A3
chr93505700335057064-3'-UTR,intron-Distal3.264963.07461K562DROSHA
chr93505686235056897-3'-UTR,intron-Distal,intron-Proximal5.142437.36168HepG2SUB1
chr93506797935068061-3'-UTR,CDS,intron-Distal,intron-Proximal3.4779416.77366HepG2PPIG
chr93505703235057126-3'-UTR,CDS,intron-Distal,intron-Proximal3.3653222.58434HepG2RPS3
chr93506799135068058-3'-UTR,CDS,intron-Distal3.524368.51590HepG2GRWD1
chr93506802535068056-3'-UTR,CDS,intron-Distal4.492808.81535HepG2G3BP1
chr93505670235056901-3'-UTR,intron-Distal,intron-Proximal5.4009218.39943HepG2UPF1
chr93506829435068375-3'-UTR,CDS,intron-Distal,intron-Proximal3.186184.50819HepG2AQR
chr93507253835072613-5'-UTR,intron-Distal,intron-Proximal4.6873625.01777K562DDX3X
chr93507252735072589-5'-UTR,intron-Distal,intron-Proximal4.748756.99499K562DROSHA
chr93507229035072322-5'-UTR,intron-Distal4.337777.56654HepG2PRPF8
chr93507172635071783-5'-UTR,intron-Distal3.770425.12003HepG2HNRNPM
chr93507241635072475-5'-UTR,intron-Distal3.443758.08664K562FXR2
chr93507249435072600-5'-UTR,intron-Distal,intron-Proximal3.392357.07391K562FMR1
chr93507241235072476-5'-UTR,intron-Distal3.157677.42450HepG2EIF3D
chr93507236635072400-5'-UTR,intron-Distal3.649685.73494K562GEMIN5
chr93507251735072583-5'-UTR,intron-Distal,intron-Proximal3.2005611.68742HepG2RPS3
chr93507253735072599-5'-UTR,intron-Distal,intron-Proximal3.7048015.49371HepG2DDX3X
chr93507243535072444-5'-UTR,intron-Distal4.098514.13697K562RPS3
chr93507247935072538-5'-UTR,intron-Distal4.1334913.76551K562DDX3X
chr93507229235072337-5'-UTR,CDS,intron-Distal5.300005.68078HepG2AQR
chr93507181735071868-5'-UTR,intron-Distal3.219383.77382HepG2HNRNPM
chr93507249735072513-5'-UTR,intron-Distal3.975956.24810K562RPS3
chr93507248335072540-5'-UTR,intron-Distal3.832275.71420K562RBM15
chr93507236135072400-5'-UTR,intron-Distal4.8625210.22224K562RPS3
chr93507234635072434-5'-UTR,CDS,intron-Distal5.194596.30933K562EIF3G
chr93507243235072474-5'-UTR,intron-Distal5.065708.22413K562GEMIN5
chr93507242135072461-5'-UTR,intron-Distal4.436854.83945K562FMR1
chr93507234435072401-5'-UTR,CDS,intron-Distal3.225385.42592K562FXR2
chr93507242835072476-5'-UTR,intron-Distal3.615795.36986K562RBM15
chr93507235935072407-5'-UTR,intron-Distal3.396956.81726HepG2GRWD1
chr93507236535072401-5'-UTR,intron-Distal3.241139.69009HepG2RPS3
chr93507236035072412-5'-UTR,intron-Distal3.986984.69803HepG2NOL12
chr93507250435072593-5'-UTR,intron-Distal,intron-Proximal3.967745.70053K562GEMIN5
chr93507188735071963-5'-UTR,intron-Distal3.301123.39857HepG2HNRNPM
chr93507247535072565-5'-UTR,intron-Distal,intron-Proximal4.212159.96896K562FXR2
chr93507233835072404-5'-UTR,CDS,intron-Distal4.1816320.14506HepG2DDX3X
chr93507232235072342-5'-UTR,CDS,intron-Distal3.390086.34676HepG2PRPF8
chr93507243635072476-5'-UTR,intron-Distal3.1836612.01653HepG2DDX3X
chr93506101135061040-CDS,intron-Distal,intron-Proximal5.2391911.58552K562FXR2
chr93506030935060363-CDS,intron-Distal,intron-Proximal4.315376.22473K562FMR1
chr93506669235066786-CDS,intron-Distal3.543335.80788K562SND1
chr93506667335066727-CDS,intron-Distal3.963359.01769HepG2RPS3
chr93506109435061174-CDS,intron-Distal3.790028.59181K562FXR2
chr93506115335061190-CDS,intron-Distal,intron-Proximal3.895794.52312K562AQR
chr93506410735064154-CDS,intron-Distal,intron-Proximal3.518345.35619K562AQR
chr93506533935065385-CDS,intron-Distal,intron-Proximal4.644366.09320K562BUD13
chr93506411235064170-CDS,intron-Distal,intron-Proximal5.1240616.79021HepG2PRPF8
chr93506292535062986-CDS,intron-Distal,intron-Proximal5.429358.03507K562AQR
chr93506050735060534-CDS,intron-Distal,intron-Proximal4.238874.39669K562BUD13
chr93506087935060920-CDS,intron-Distal,intron-Proximal3.976165.28152K562SND1
chr93506031135060350-CDS,intron-Distal4.8243713.04923K562RPS3
chr93505953235059623-CDS,intron-Distal3.0923210.50311K562SND1
chr93505954035059583-CDS,intron-Distal3.905659.87480HepG2G3BP1
chr93506784035067891-CDS,intron-Distal,intron-Proximal3.616388.72467K562AQR
chr93505976135059812-CDS,intron-Distal,intron-Proximal3.458238.44069K562U2AF2
chr93506304635063082-CDS,intron-Distal,intron-Proximal3.057228.76705HepG2BUD13
chr93505747735057513-CDS,intron-Distal4.6040015.54935HepG2G3BP1
chr93506075435060819-CDS,intron-Distal,intron-Proximal4.0778322.98657HepG2PRPF8
chr93506233235062347-CDS,intron-Distal3.298505.87824HepG2G3BP1
chr93506097735061027-CDS,intron-Distal,intron-Proximal4.1964711.57027HepG2PRPF8
chr93506209135062130-CDS,intron-Distal,intron-Proximal4.227025.37099K562FXR2
chr93506110135061166-CDS,intron-Distal4.0855813.00889HepG2RPS3
chr93506788635067935-CDS,intron-Distal,intron-Proximal4.627665.41332K562PUM1
chr93505959235059610-CDS,intron-Distal3.9005411.93078K562YBX3
chr93505966335059779-CDS,intron-Distal,intron-Proximal3.4307418.27751HepG2G3BP1
chr93506227635062346-CDS,intron-Distal3.144066.06412K562SND1
chr93506108535061144-CDS,intron-Distal4.6786713.83935HepG2G3BP1
chr93505911635059163-CDS,intron-Distal3.181758.20394K562YBX3
chr93506533735065396-CDS,intron-Distal,intron-Proximal3.492114.98672K562AQR
chr93505977735059798-CDS,intron-Distal4.265947.21729HepG2RPS3
chr93506678235066815-CDS,intron-Distal,intron-Proximal3.5250711.70030HepG2RPS3
chr93506297435062985-CDS,intron-Distal,intron-Proximal3.752895.40651HepG2PPIG
chr93506525535065303-CDS,intron-Distal,intron-Proximal3.076013.85371K562SND1
chr93505911635059178-CDS,intron-Distal4.614189.63229K562FMR1
chr93506788635067925-CDS,intron-Distal,intron-Proximal3.364116.83938HepG2RPS3
chr93506420635064244-CDS,intron-Distal,intron-Proximal3.674897.63447K562FMR1
chr93506110335061164-CDS,intron-Distal4.7332611.07433K562FMR1
chr93506115335061175-CDS,intron-Distal3.718195.23342HepG2G3BP1
chr93505733735057396-CDS,intron-Distal,intron-Proximal5.925508.38577HepG2PRPF8
chr93506415535064183-CDS,intron-Distal,intron-Proximal3.526885.97823HepG2BCLAF1
chr93506225235062299-CDS,intron-Distal4.475958.90122K562RPS3
chr93506201135062063-CDS,intron-Distal5.1885916.08390HepG2G3BP1
chr93505910335059155-CDS,intron-Distal3.180164.98411K562RBM15
chr93506533435065368-CDS,intron-Distal,intron-Proximal5.196718.42929K562FMR1
chr93505751335057526-CDS,intron-Distal4.524119.10244HepG2G3BP1
chr93506530735065359-CDS,intron-Distal,intron-Proximal4.1020511.79057HepG2G3BP1
chr93506533035065379-CDS,intron-Distal,intron-Proximal5.6866825.89014K562RPS3
chr93505961035059650-CDS,intron-Distal,intron-Proximal3.9340113.89964K562YBX3
chr93505738235057410-CDS,intron-Distal3.730924.09885HepG2BCLAF1
chr93506206335062102-CDS,intron-Distal4.8330112.57676HepG2G3BP1
chr93505949035059540-CDS,intron-Distal4.5800912.42029HepG2G3BP1
chr93506420635064251-CDS,intron-Distal,intron-Proximal4.317504.30948K562LIN28B
chr93506079635060834-CDS,intron-Distal,intron-Proximal3.647337.84167HepG2RPS3
chr93506087935060920-CDS,intron-Distal,intron-Proximal4.3814111.97604K562FXR2
chr93506101135061028-CDS,intron-Distal,intron-Proximal4.369663.92846K562SND1
chr93506080035060832-CDS,intron-Distal3.047453.13705K562BUD13
chr93505968235059738-CDS,intron-Distal,intron-Proximal3.460126.37586K562FMR1
chr93506115635061238-CDS,intron-Distal,intron-Proximal3.215043.90373HepG2AQR
chr93506299835063074-CDS,intron-Distal4.7839418.72106HepG2G3BP1
chr93506532535065372-CDS,intron-Distal,intron-Proximal4.044107.02942K562FXR2
chr93506231035062347-CDS,intron-Distal3.809008.58713HepG2PPIG
chr93506085535060920-CDS,intron-Distal,intron-Proximal3.233298.63620HepG2G3BP1
chr93506532335065357-CDS,intron-Distal,intron-Proximal3.337624.74886HepG2BCLAF1
chr93506524835065297-CDS,intron-Distal,intron-Proximal3.809864.90615K562FXR2
chr93505949235059528-CDS,intron-Distal3.567598.97074HepG2RPS3
chr93506668135066703-CDS,intron-Distal4.131185.97760HepG2G3BP1
chr93506297635063041-CDS,intron-Distal7.0317015.60419K562RPS3
chr93506157635061613-CDS,intron-Distal3.639667.72032HepG2G3BP1
chr93506425935064281-CDS,intron-Distal5.5200710.45894HepG2G3BP1
chr93506678935066814-CDS,intron-Distal4.1213712.34182HepG2G3BP1
chr93506524835065307-CDS,intron-Distal,intron-Proximal5.9341225.86712HepG2G3BP1
chr93506416235064241-CDS,intron-Distal,intron-Proximal4.5984410.57277K562FXR2
chr93506101135061029-CDS,intron-Distal,intron-Proximal4.335038.46004K562FMR1
chr93505967235059754-CDS,intron-Distal,intron-Proximal5.2356430.52218K562RPS3
chr93506420235064233-CDS,intron-Distal,intron-Proximal4.287755.18795HepG2RPS3
chr93506030935060352-CDS,intron-Distal,intron-Proximal3.047844.55663K562FXR2
chr93506667035066698-CDS,intron-Distal,intron-Proximal4.877998.82884K562RPS3
chr93505747135057586-CDS,intron-Distal,intron-Proximal4.182496.78984HepG2AQR
chr93506680235066866-CDS,intron-Distal,intron-Proximal4.541638.25856K562SF3B4
chr93506080735060855-CDS,intron-Distal4.1155410.69298HepG2G3BP1
chr93506079735060810-CDS,intron-Distal,intron-Proximal4.975957.40172K562RPS3
chr93506410135064168-CDS,intron-Distal,intron-Proximal3.353735.54603K562PRPF8
chr93506205835062131-CDS,intron-Distal,intron-Proximal4.687669.34514K562FMR1
chr93505976435059813-CDS,intron-Distal,intron-Proximal3.629015.42523K562U2AF1
chr93506088935060920-CDS,intron-Distal,intron-Proximal3.167035.17196HepG2RPS3
chr93506533035065369-CDS,intron-Distal,intron-Proximal4.044149.53949HepG2RPS3
chr93505911135059166-CDS,intron-Distal4.5195711.21468HepG2RPS3
chr93505737135057415-CDS,intron-Distal,intron-Proximal3.797046.51082HepG2PPIG
chr93506532235065377-CDS,intron-Distal,intron-Proximal3.254364.12588K562SND1
chr93505975435059799-CDS,intron-Distal,intron-Proximal4.6422422.32117K562RPS3
chr93506678335066868-CDS,intron-Distal,intron-Proximal3.7832020.12166HepG2BUD13
chr93505740935057528-CDS,intron-Distal,intron-Proximal3.595707.17964K562ZNF800
chr93506079835060807-CDS,intron-Distal3.649445.23342HepG2G3BP1
chr93505737435057404-CDS,intron-Distal3.099813.27682HepG2LARP4
chr93505967135059751-CDS,intron-Distal,intron-Proximal3.7640910.04254HepG2RPS3
chr93506050035060569-CDS,intron-Distal,intron-Proximal4.3629617.47573K562SF3B4
chr93506104035061076-CDS,intron-Distal4.004778.21826HepG2G3BP1
chr93506679635066891-CDS,intron-Distal,intron-Proximal3.396916.68206HepG2AQR
chr93506232235062381-CDS,intron-Distal,intron-Proximal4.663765.90930HepG2AQR
chr93505906135059130-CDS,intron-Distal4.2656215.45288HepG2G3BP1
chr93506086435060921-CDS,intron-Distal,intron-Proximal4.7246611.81724K562FMR1
chr93506030935060320-CDS,intron-Distal,intron-Proximal4.296647.21729HepG2RPS3
chr93506415035064188-CDS,intron-Distal,intron-Proximal4.4136311.85463HepG2G3BP1
chr93506788735067943-CDS,intron-Distal,intron-Proximal3.2765110.56905HepG2G3BP1
chr93506229935062348-CDS,intron-Distal,intron-Proximal5.8572012.41696K562RPS3
chr93506048035060538-CDS,intron-Distal,intron-Proximal3.5630210.39508HepG2U2AF2
chr93506222235062305-CDS,intron-Distal,intron-Proximal4.0019716.04067HepG2G3BP1
chr93506416735064206-CDS,intron-Distal,intron-Proximal4.147857.34999K562FMR1
chr93505716535057215-CDS,intron-Distal,intron-Proximal3.906389.33213HepG2G3BP1
chr93506050835060521-CDS,intron-Distal3.969155.41973HepG2G3BP1
chr93506209335062146-CDS,intron-Distal,intron-Proximal3.616247.83009HepG2PRPF8
chr93505744035057477-CDS,intron-Distal3.8573910.96671HepG2G3BP1
chr93506793235067985-CDS,intron-Distal3.269996.36993K562SND1
chr93506050235060573-CDS,intron-Distal,intron-Proximal4.232513.25089HepG2AQR
chr93506087135060948-CDS,intron-Distal,intron-Proximal3.577798.36543HepG2U2AF2
chr93506083435060871-CDS,intron-Distal4.422837.73437HepG2RPS3
chr93506419635064259-CDS,intron-Distal,intron-Proximal4.4350415.98694HepG2G3BP1
chr93505904335059062-CDS,intron-Distal,intron-Proximal3.913136.42898K562AQR
chr93506187235061946-intron-Distal,intron-Proximal3.616373.95921HepG2U2AF2
chr93506008935060142-intron-Distal3.038145.25094K562PRPF8
chr93506074535060797-intron-Distal,intron-Proximal4.464546.77156K562AQR
chr93506820535068226-intron-Distal,intron-Proximal4.492117.92018K562AQR
chr93506052735060560-intron-Distal,intron-Proximal3.222746.43421HepG2BUD13
chr93506071635060798-intron-Distal,intron-Proximal3.305217.65809K562PRPF8
chr93506026135060295-intron-Distal,intron-Proximal5.148516.01989HepG2PRPF8
chr93506215435062211-intron-Distal,intron-Proximal4.603889.10443HepG2PRPF8
chr93505827535058352-intron-Distal3.878363.21228K562TIA1
chr93506071035060791-intron-Distal,intron-Proximal3.189603.11628K562KHSRP
chr93506151035061574-intron-Distal,intron-Proximal5.8226411.56697K562AQR
chr93506783035067871-intron-Distal,intron-Proximal3.716535.43815HepG2PRPF8
chr93506811035068175-intron-Distal,intron-Proximal3.674114.36528HepG2U2AF2
chr93506822635068248-intron-Distal,intron-Proximal5.464548.03507K562AQR
chr93506194335061991-intron-Distal,intron-Proximal4.477364.22101K562PRPF8
chr93505900335059043-intron-Distal,intron-Proximal3.814048.67867K562AQR
chr93506151935061564-intron-Distal,intron-Proximal4.463794.97857HepG2AQR
chr93506019435060235-intron-Distal,intron-Proximal3.554954.58287K562PRPF8
chr93506520735065248-intron-Distal,intron-Proximal4.623634.09264K562AQR
chr93506026235060310-intron-Distal,intron-Proximal5.153075.26064K562AQR
chr93506214035062187-intron-Distal,intron-Proximal4.107254.22551K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for VCP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for VCP is not available on ENCORE database.

  • 96 RBPs can affect the levels of VCP.  








The Knockdown/knockout RNA-Seq assay for VCP is not available on ENCORE database.





96 RBPs can affect the gene expression of VCP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
VCPENSG00000165280.117966.557406895.128900.208303.702903.01900HepG2ACO1
VCPENSG00000165280.119950.869207861.317700.340002.449901.94620HepG2AKAP1
VCPENSG00000165280.118275.800906504.550200.347303.007602.18980HepG2ASCC1
VCPENSG00000165280.114829.004806143.28820-0.347302.799301.89670HepG2BCLAF1
VCPENSG00000165280.113183.893004046.90440-0.346003.513202.84820HepG2BOP1
VCPENSG00000165280.119683.067506179.780200.647809.545608.18350HepG2CIRBP
VCPENSG00000165280.117723.084406893.317700.163902.819102.14890HepG2CKAP4
VCPENSG00000165280.114025.244704912.46980-0.287404.166902.91400HepG2YBX3
VCPENSG00000165280.114392.265405762.84800-0.391804.720703.86100HepG2DDX21
VCPENSG00000165280.119184.521007530.482900.286402.126301.57080HepG2DDX3X
VCPENSG00000165280.115183.509306468.99300-0.319602.129901.58050HepG2DDX6
VCPENSG00000165280.117609.108606596.689000.205903.077502.36840HepG2DKC1
VCPENSG00000165280.113891.103004823.87280-0.310004.833003.92610HepG2DNAJC21
VCPENSG00000165280.115187.243903730.297500.475605.465104.20550HepG2EEF2
VCPENSG00000165280.114451.121606218.64870-0.482405.024604.23800HepG2EIF2S1
VCPENSG00000165280.117426.788909359.68660-0.333704.117603.13470HepG2EIF4G1
VCPENSG00000165280.116156.429008965.77320-0.542307.367106.06630HepG2EIF4G2
VCPENSG00000165280.119354.3173011622.24740-0.313207.012706.12960HepG2ETF1
VCPENSG00000165280.119100.690506737.495300.433706.411405.14020HepG2EWSR1
VCPENSG00000165280.115033.038206582.68450-0.387209.123407.48330HepG2HDGF
VCPENSG00000165280.115412.633107300.53410-0.4317011.251709.93510HepG2HNRNPF
VCPENSG00000165280.113183.763604018.82250-0.336002.895402.25360HepG2HNRNPLL
VCPENSG00000165280.114596.667605381.16660-0.227302.554701.97210HepG2HNRNPU
VCPENSG00000165280.115320.762604022.150200.403602.851601.59870HepG2HSPD1
VCPENSG00000165280.116049.179407188.92680-0.249002.688001.97390HepG2IGF2BP1
VCPENSG00000165280.119101.336406538.179900.477105.352704.44060HepG2IGF2BP2
VCPENSG00000165280.114902.832905496.69970-0.165002.801202.06480HepG2ILF2
VCPENSG00000165280.115432.032106302.81780-0.214504.314803.05230HepG2KIF1C
VCPENSG00000165280.118109.327506439.825900.332502.066701.35750HepG2LARP4
VCPENSG00000165280.118403.822006936.470200.276702.008901.44610HepG2MAGOH
VCPENSG00000165280.112934.842404099.27540-0.482102.949401.94560HepG2MTPAP
VCPENSG00000165280.119206.574807139.533800.366703.088202.42140HepG2NCBP2
VCPENSG00000165280.116934.053509406.37910-0.439907.984506.70980HepG2NOL12
VCPENSG00000165280.119231.334606973.634400.4045010.752709.68300HepG2PCBP1
VCPENSG00000165280.113664.442504799.58710-0.389306.923005.79800HepG2PPIL4
VCPENSG00000165280.113294.864004599.54140-0.4813011.8919010.45190HepG2PRPF4
VCPENSG00000165280.114391.638705362.08660-0.288002.210501.48590HepG2PRPF8
VCPENSG00000165280.1110749.540509525.426500.174301.906201.34360HepG2PUM2
VCPENSG00000165280.118249.194307023.090300.232004.475203.72820HepG2PUS1
VCPENSG00000165280.116741.453507684.96750-0.189001.990401.44700HepG2QKI
VCPENSG00000165280.114528.781205877.88530-0.376205.881704.68910HepG2RBM15
VCPENSG00000165280.116169.221407355.24450-0.253704.524903.76190HepG2RECQL
VCPENSG00000165280.114649.547907864.69020-0.7583015.4909014.12720HepG2RPLP0
VCPENSG00000165280.118667.358206645.926400.383002.512601.87100HepG2SF3A3
VCPENSG00000165280.115713.733307387.70830-0.370708.969707.99760HepG2SF3B4
VCPENSG00000165280.116726.138008610.91480-0.356405.324104.40430HepG2SLBP
VCPENSG00000165280.116271.214605588.634700.166102.980102.31600HepG2SMN1
VCPENSG00000165280.117198.567605482.323700.392802.475901.57340HepG2SMNDC1
VCPENSG00000165280.1111833.769407711.240700.6178028.6610027.49240HepG2SRSF1
VCPENSG00000165280.115728.665807172.58580-0.324306.912805.89360HepG2SRSF7
VCPENSG00000165280.115464.551906273.56760-0.199203.086002.50900HepG2SRSF9
VCPENSG00000165280.1113840.216809525.616300.5389020.8465019.72380HepG2SSB
VCPENSG00000165280.113369.866405021.02710-0.575304.134302.64820HepG2SUB1
VCPENSG00000165280.114551.614503584.102500.344703.554202.49800HepG2SUPT6H
VCPENSG00000165280.113965.844206931.36530-0.8055028.5221026.96720HepG2TAF15
VCPENSG00000165280.113129.599503917.83400-0.324102.986502.23710HepG2TARDBP
VCPENSG00000165280.115006.412506368.76660-0.347204.518203.45720HepG2TIA1
VCPENSG00000165280.113616.191905229.16240-0.5321010.715409.84220HepG2TIAL1
VCPENSG00000165280.115767.814104541.145800.344903.089702.42790HepG2U2AF1
VCPENSG00000165280.116498.426009286.95630-0.515105.194004.02570HepG2UBE2L3
VCPENSG00000165280.112872.523204087.79210-0.509005.612604.52380HepG2UCHL5
VCPENSG00000165280.116915.445105893.929200.230504.177903.34760HepG2UPF1
VCPENSG00000165280.1110696.776706482.181700.7225049.1148047.55380HepG2ZNF622
VCPENSG00000165280.113957.319905369.10400-0.440202.989901.63990HepG2ZRANB2
VCPENSG00000165280.117393.100605263.798900.4900010.686009.66530K562AGGF1
VCPENSG00000165280.117015.547005784.261300.278302.717801.74740K562AKAP8
VCPENSG00000165280.117744.120405477.256300.499507.442706.32660K562AKAP8L
VCPENSG00000165280.117789.8321010304.99510-0.403704.704103.97590K562AQR
VCPENSG00000165280.116771.333305747.026400.236503.119802.14650K562ATP5C1
VCPENSG00000165280.112179.200102701.50680-0.310002.389201.58490K562BOP1
VCPENSG00000165280.111791.289402601.62300-0.538405.582203.95210K562CCAR1
VCPENSG00000165280.118445.085306363.252300.408204.813603.12200K562CIRBP
VCPENSG00000165280.117145.671306133.708800.220203.203102.00570K562CPEB4
VCPENSG00000165280.115260.280606347.41830-0.271004.545803.73780K562DDX47
VCPENSG00000165280.112191.218602912.30910-0.410403.856502.23860K562DHX30
VCPENSG00000165280.111442.104002646.38320-0.875807.484805.78710K562EIF3A
VCPENSG00000165280.113289.889605267.11080-0.6790011.8699010.13570K562EIF4A3
VCPENSG00000165280.1110126.2426011516.92640-0.185702.484701.59060K562EIF4G2
VCPENSG00000165280.113771.747905061.95010-0.424503.035801.70750K562EXOSC5
VCPENSG00000165280.112677.661503502.60170-0.387503.301502.05060K562FKBP4
VCPENSG00000165280.111944.294202477.15570-0.349402.627501.73920K562FTO
VCPENSG00000165280.116725.193805477.581500.295905.008604.22900K562FXR1
VCPENSG00000165280.113189.345004342.41050-0.445203.195102.42670K562G3BP2
VCPENSG00000165280.114446.488105656.70640-0.347302.838301.39800K562GEMIN5
VCPENSG00000165280.117715.8158010453.73030-0.438106.023604.90330K562GRSF1
VCPENSG00000165280.112474.915404033.27570-0.7046014.2398012.96840K562HNRNPC
VCPENSG00000165280.116882.633408397.14580-0.286904.127403.02860K562HNRNPU
VCPENSG00000165280.114470.760106337.35810-0.503403.000402.17340K562HSPD1
VCPENSG00000165280.117120.098405812.615400.292603.100302.22330K562KIF1C
VCPENSG00000165280.111721.612902341.73190-0.443803.059902.07290K562KRR1
VCPENSG00000165280.115067.068506239.82060-0.300402.836501.98530K562MAGOH
VCPENSG00000165280.116777.089105564.202600.284402.918601.80750K562MAK16
VCPENSG00000165280.114464.715805726.89790-0.359208.356907.02260K562MTPAP
VCPENSG00000165280.116048.505904564.181000.406102.734501.85830K562NAA15
VCPENSG00000165280.115597.563906362.80380-0.184904.025703.14360K562NSUN2
VCPENSG00000165280.113295.604305294.46610-0.683905.212503.49540K562PABPC1
VCPENSG00000165280.114287.129206438.79960-0.586807.089505.75530K562PCBP3
VCPENSG00000165280.113757.969004938.97650-0.394303.702502.76930K562POLR2G
VCPENSG00000165280.117066.490006062.561400.221002.070901.48070K562PTBP1
VCPENSG00000165280.1110555.4154013095.67310-0.311105.776604.37200K562PUM2
VCPENSG00000165280.118860.154205431.685900.7058012.7427011.62420K562PUS1
VCPENSG00000165280.117239.823405292.566300.451909.461108.38740K562RBM15
VCPENSG00000165280.113777.685605592.85760-0.566105.885204.68900K562RPS19
VCPENSG00000165280.113359.230104549.49720-0.437604.851202.92300K562SDAD1
VCPENSG00000165280.115536.137904513.518000.294503.466002.50520K562SF3B4
VCPENSG00000165280.112215.161702865.79850-0.371503.398601.98710K562SLBP
VCPENSG00000165280.117460.583505943.609100.327804.142103.28440K562SRSF1
VCPENSG00000165280.114422.926305621.98180-0.346103.911402.09740K562SRSF9
VCPENSG00000165280.113755.803005316.24780-0.501304.972503.57650K562SUPV3L1
VCPENSG00000165280.112560.130403478.26120-0.442104.163802.99450K562TIAL1
VCPENSG00000165280.113496.747904681.08470-0.420803.520801.49950K562TRNAU1AP
VCPENSG00000165280.114503.513506003.35310-0.4147011.9530010.33670K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for VCP is not available on ENCORE database.





3 RBPs can affect the splicing of VCP :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RIVCPENSG00000165280.11chr9-3506030935060920350603093506052235060797350609200.065000.000000.00000includedK562PUS1
RIVCPENSG00000165280.11chr9-3506199935062347350619993506213535062213350623470.055000.000000.00000includedHepG2FTO
RIVCPENSG00000165280.11chr9-3506199935062347350619993506213535062213350623470.124000.000000.00000includedK562AQR
RIVCPENSG00000165280.11chr9-3506030935060920350603093506052235060797350609200.053000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for VCP is not avaliable on ENCORE database.