ARID1B

General Information

Gene Name       : ARID1B
Gene ID             : ENSG00000049618.23
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARID1B)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARID1BENSG00000049618.2344.1240.3242.22ENCSR000AEF
HepG2ARID1BENSG00000049618.2329.0628.6228.84ENCSR985KAT
K562ARID1BENSG00000049618.2318.9320.2319.58ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARID1B is not avaliable on ENCORE database.



Proteins bound to RNA

  • ARID1B RNA is bound by 57 proteins.  







eCLIP assay for ARID1B is not avaliable on ENCORE database.





57 proteins are bound to ARID1B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr6157530281157530332+3'-UTR4.385067.45604K562PUM2
chr6157530001157530051+3'-UTR6.0790110.22767K562PABPC4
chr6157431600157431697+CDS,intron-Distal,intron-Proximal3.010014.27347K562IGF2BP1
chr6157256603157256736+CDS,intron-Proximal3.212794.37145K562GRWD1
chr6157222572157222659+CDS4.112394.24775K562IGF2BP2
chr6157502038157502121+CDS,intron-Proximal4.179037.97066HepG2U2AF2
chr6157519944157520016+CDS,intron-Proximal3.086923.73997K562ZNF622
chr6157522271157522372+CDS3.362408.83002HepG2IGF2BP1
chr6157470084157470098+CDS,intron-Proximal4.577076.48405K562AQR
chr6157505535157505616+CDS,intron-Proximal6.3915517.69067HepG2PRPF8
chr6157256618157256684+CDS3.284738.41511K562ZNF622
chr6157150360157150386+CDS,intron-Proximal3.442173.95301K562ZNF622
chr6157256622157256706+CDS3.413637.36517K562DDX24
chr6157517392157517446+CDS3.012875.00751HepG2BCLAF1
chr6157528295157528381+CDS3.415513.79741HepG2GRWD1
chr6157469762157469844+CDS3.461595.79905HepG2BCLAF1
chr6157527788157527884+CDS3.079205.39172HepG2G3BP1
chr6157100573157100598+CDS3.427863.47312HepG2FXR2
chr6157150360157150382+CDS,intron-Proximal3.900533.32022K562UCHL5
chr6157469747157469808+CDS,intron-Proximal3.168326.24581HepG2U2AF2
chr6157100188157100212+CDS3.083134.76957K562LIN28B
chr6157517322157517450+CDS,intron-Proximal3.767296.42513K562YBX3
chr6157150382157150502+CDS3.213335.76422K562UCHL5
chr6157099889157099936+CDS4.899574.98895HepG2FXR2
chr6157100392157100464+CDS4.168754.85526K562PCBP1
chr6157469942157470016+CDS3.008884.87174HepG2PPIG
chr6157511205157511305+CDS3.780289.84695HepG2GRWD1
chr6157527489157527627+CDS3.7687912.47339HepG2FXR2
chr6157510733157510804+CDS,intron-Proximal3.895794.52312K562AQR
chr6157454222157454291+CDS4.291077.53358HepG2BCLAF1
chr6157527539157527640+CDS3.196404.07132HepG2GRWD1
chr6157511327157511389+CDS,intron-Proximal3.133356.82513HepG2PRPF8
chr6157527820157527944+CDS3.115235.74981HepG2GRWD1
chr6157495195157495316+CDS,intron-Proximal3.9433910.95071HepG2PRPF8
chr6157256597157256691+CDS,intron-Proximal5.0435716.98581HepG2GRWD1
chr6157502229157502282+CDS3.526864.27261HepG2GRWD1
chr6157527518157527648+CDS3.269934.11570HepG2AGGF1
chr6157527575157527606+CDS4.377103.71570HepG2BCLAF1
chr6157505569157505624+CDS,intron-Proximal4.888895.65342K562AQR
chr6157528753157528828+CDS4.730806.44474K562YBX3
chr6157522372157522454+CDS4.991566.67181HepG2IGF2BP1
chr6157505568157505611+CDS,intron-Proximal4.698956.03362HepG2AQR
chr6157488194157488271+CDS3.135433.47314HepG2G3BP1
chr6157528024157528066+CDS3.512415.10442K562YBX3
chr6157100036157100107+CDS3.443838.30456HepG2FTO
chr6157256684157256714+CDS,intron-Proximal3.663696.44455K562ZNF622
chr6157100572157100657+CDS,intron-Proximal3.337777.66017HepG2PRPF8
chr6157222509157222564+CDS,intron-Proximal4.373514.56106HepG2EIF3H
chr6157256669157256754+CDS,intron-Proximal3.9063811.21209HepG2BCLAF1
chr6157099417157099526+CDS3.208655.26494HepG2IGF2BP1
chr6157100043157100104+CDS4.394393.75546HepG2KHSRP
chr6157256684157256750+CDS,intron-Proximal3.4356010.59064K562KHSRP
chr6157150376157150473+CDS3.097503.18634K562MTPAP
chr6157256599157256622+CDS,intron-Proximal3.774443.04209K562DDX24
chr6157222509157222582+CDS,intron-Proximal4.613885.86954K562UCHL5
chr6157502106157502155+CDS4.104863.29312HepG2FXR2
chr6157099767157099807+CDS3.586474.36388HepG2EIF3H
chr6157454223157454268+CDS3.591934.41267HepG2PPIG
chr6157470081157470131+CDS,intron-Proximal3.315226.18341HepG2PRPF8
chr6157527903157527947+CDS3.889133.02250K562YBX3
chr6157502282157502313+CDS,intron-Proximal4.003953.80193HepG2GRWD1
chr6157495125157495195+CDS,intron-Proximal4.046198.36543HepG2U2AF2
chr6157100189157100272+CDS3.654887.43720HepG2LIN28B
chr6157099470157099528+CDS3.467593.63681K562RBM15
chr6157100212157100254+CDS3.850256.75520K562LIN28B
chr6157502125157502193+CDS3.698863.68471HepG2BCLAF1
chr6157264859157264919+intron-Distal4.453134.58794K562KHSRP
chr6157273945157274023+intron-Distal3.870354.29698HepG2SFPQ
chr6157351683157351750+intron-Distal4.036648.18864HepG2SFPQ
chr6157257141157257202+intron-Distal3.783295.50856K562EXOSC5
chr6157153427157153548+intron-Distal3.091995.07515K562KHSRP
chr6157160365157160453+intron-Distal3.143825.36060HepG2SUGP2
chr6157468737157468779+intron-Distal4.070184.70992HepG2DDX59
chr6157271569157271643+intron-Distal4.068563.00241HepG2SFPQ
chr6157143886157143984+intron-Distal4.151347.67565HepG2HNRNPM
chr6157468741157468782+intron-Distal5.602207.61882HepG2PCBP2
chr6157100759157100805+intron-Distal3.626123.15754HepG2DHX30
chr6157162031157162108+intron-Distal4.4633810.12287HepG2HNRNPM
chr6157350843157350929+intron-Distal3.502453.98493HepG2HNRNPUL1
chr6157161889157161946+intron-Distal4.4769610.25036HepG2HNRNPM
chr6157289991157290075+intron-Distal4.2849717.96218HepG2HNRNPM
chr6157259644157259688+intron-Distal3.648935.04794HepG2KHSRP
chr6157312062157312143+intron-Distal5.3166113.63371K562QKI
chr6157307524157307625+intron-Distal4.161365.19843HepG2CSTF2
chr6157256750157256812+intron-Distal,intron-Proximal4.1570218.17658K562KHSRP
chr6157176843157176907+intron-Distal4.436974.92524K562TARDBP
chr6157344094157344128+intron-Distal3.139863.10946HepG2SFPQ
chr6157239858157239943+intron-Distal3.616153.42785HepG2HNRNPM
chr6157357951157358011+intron-Distal3.9624211.25083HepG2U2AF2
chr6157342501157342557+intron-Distal3.491193.80158K562NONO
chr6157258798157258862+intron-Distal4.7905417.98935K562EXOSC5
chr6157161296157161407+intron-Distal4.593895.90588K562MATR3
chr6157298996157299063+intron-Distal3.415525.42643HepG2MATR3
chr6157104382157104454+intron-Distal5.062835.54528HepG2QKI
chr6157312154157312191+intron-Distal4.5992110.81726HepG2QKI
chr6157161462157161579+intron-Distal4.089487.57837HepG2MATR3
chr6157488698157488799+intron-Distal3.756005.82781HepG2KHSRP
chr6157273603157273699+intron-Distal4.714416.35761K562HNRNPM
chr6157342228157342301+intron-Distal3.638465.10104K562NONO
chr6157234840157234990+intron-Distal6.7877722.51953HepG2DDX59
chr6157259503157259557+intron-Distal3.6505711.59501K562KHSRP
chr6157273644157273697+intron-Distal3.442754.83226HepG2HNRNPM
chr6157143610157143726+intron-Distal4.133954.27460K562HNRNPM
chr6157342632157342712+intron-Distal3.354774.99588HepG2CSTF2
chr6157259431157259503+intron-Distal3.887537.71234K562KHSRP
chr6157432799157432876+intron-Distal3.578403.02234K562KHSRP
chr6157256967157257063+intron-Distal3.397333.51962K562RBFOX2
chr6157282926157282977+intron-Distal4.106593.92684K562KHSRP
chr6157369643157369811+intron-Distal4.199757.55138K562KHSRP
chr6157424984157425048+intron-Distal4.000513.82697HepG2HNRNPC
chr6157338093157338168+intron-Distal3.839736.89441K562KHSRP
chr6157361423157361518+intron-Distal5.8262112.01040K562PTBP1
chr6157406889157407016+intron-Distal3.006993.02891HepG2HNRNPL
chr6157329847157329967+intron-Distal4.043563.97974HepG2RBFOX2
chr6157318564157318626+intron-Distal3.975337.99418K562KHSRP
chr6157304759157304833+intron-Distal4.777076.61547K562HNRNPM
chr6157269542157269631+intron-Distal4.589153.37208HepG2ILF3
chr6157354248157354381+intron-Distal3.906573.90026K562KHSRP
chr6157194814157194889+intron-Distal3.809546.23177HepG2SUGP2
chr6157373052157373099+intron-Distal3.906573.90026K562KHSRP
chr6157284574157284711+intron-Distal5.7095515.62868K562KHSRP
chr6157204618157204729+intron-Distal3.737015.36899HepG2PTBP1
chr6157361094157361133+intron-Distal4.057076.57428HepG2PTBP1
chr6157468316157468363+intron-Distal5.459877.06641HepG2PCBP2
chr6157414556157414662+intron-Distal4.288774.30850HepG2QKI
chr6157110288157110375+intron-Distal4.064403.27946HepG2HNRNPM
chr6157373195157373281+intron-Distal3.459324.35650K562KHSRP
chr6157258490157258603+intron-Distal4.808989.05886K562RBFOX2
chr6157342929157342972+intron-Distal4.413134.96496K562NONO
chr6157259668157259723+intron-Distal4.535329.06934K562KHSRP
chr6157410067157410195+intron-Distal3.478643.80761K562PTBP1
chr6157342955157342999+intron-Distal4.150763.71735K562TIA1
chr6157234909157235018+intron-Distal3.997833.58835K562HNRNPK
chr6157196680157196747+intron-Distal3.238153.10640HepG2SUGP2
chr6157388913157388980+intron-Distal3.458624.59863HepG2PTBP1
chr6157257001157257058+intron-Distal4.1040311.33090HepG2HNRNPM
chr6157187297157187399+intron-Distal5.050868.23608HepG2HNRNPM
chr6157343307157343375+intron-Distal3.7581814.38119HepG2FAM120A
chr6157301036157301097+intron-Distal5.4854513.35085HepG2HNRNPC
chr6157256936157257001+intron-Distal3.5264413.17354HepG2HNRNPM
chr6157258853157258977+intron-Distal4.1351618.15244K562KHSRP
chr6157187119157187213+intron-Distal3.974197.71515HepG2SUGP2
chr6157124548157124592+intron-Distal3.384324.19039HepG2PTBP1
chr6157235314157235373+intron-Distal5.314959.77805HepG2HNRNPK
chr6157273699157273755+intron-Distal4.694095.04680K562HNRNPM
chr6157337762157337836+intron-Distal3.808333.58352HepG2CSTF2
chr6157194628157194684+intron-Distal4.406535.11328HepG2SUGP2
chr6157258237157258280+intron-Distal5.218479.71076HepG2HNRNPM
chr6157258487157258577+intron-Distal5.4304631.38939K562EXOSC5
chr6157282982157283085+intron-Distal3.059134.89867HepG2SFPQ
chr6157234778157235010+intron-Distal5.3423228.98767HepG2HNRNPK
chr6157342484157342532+intron-Distal3.098056.23903HepG2CSTF2T
chr6157469067157469110+intron-Distal5.171428.19722HepG2PCBP2
chr6157329231157329297+intron-Distal3.391344.55951HepG2PCBP2
chr6157259727157259827+intron-Distal4.1357618.11241K562KHSRP
chr6157258239157258316+intron-Distal5.0942014.49653K562EXOSC5
chr6157341935157342040+intron-Distal4.4234512.72378HepG2CSTF2
chr6157256139157256218+intron-Distal4.251805.25174K562KHSRP
chr6157338174157338233+intron-Distal5.1229510.14166HepG2CSTF2
chr6157343421157343456+intron-Distal3.801933.30664K562NONO
chr6157235198157235364+intron-Distal5.9102137.40251HepG2DDX59
chr6157337969157338063+intron-Distal3.654684.03817HepG2KHSRP
chr6157185453157185515+intron-Distal3.189934.25236HepG2HNRNPM
chr6157143553157143606+intron-Distal3.277113.11000HepG2HNRNPM
chr6157302127157302227+intron-Distal3.308143.54181HepG2SFPQ
chr6157265068157265167+intron-Distal3.257094.36012HepG2SFPQ
chr6157288418157288439+intron-Distal3.857046.42130HepG2HNRNPL
chr6157304755157304846+intron-Distal3.458789.02812HepG2HNRNPM
chr6157186326157186405+intron-Distal3.499734.81844HepG2SUGP2
chr6157468458157468541+intron-Distal4.701696.66649HepG2HNRNPK
chr6157177793157177871+intron-Distal3.148233.77111HepG2HNRNPL
chr6157342618157342663+intron-Distal3.823407.80345HepG2CSTF2T
chr6157327104157327194+intron-Distal4.6933916.65444HepG2PTBP1
chr6157258318157258398+intron-Distal3.928313.98726HepG2RBFOX2
chr6157287539157287587+intron-Distal4.103234.25105HepG2HNRNPC
chr6157235010157235107+intron-Distal6.1602818.06888HepG2HNRNPK
chr6157161537157161602+intron-Distal3.328979.37556HepG2HNRNPM
chr6157204638157204726+intron-Distal3.851856.39777K562PTBP1
chr6157204813157204897+intron-Distal4.491315.37222HepG2MATR3
chr6157480166157480240+intron-Distal3.212055.18255HepG2HLTF
chr6157185822157185935+intron-Distal3.868963.68462HepG2MATR3
chr6157261802157261871+intron-Distal5.9620913.69859HepG2HNRNPM
chr6157372868157372917+intron-Distal4.043494.00239HepG2KHSRP
chr6157326876157326933+intron-Distal3.264805.01093HepG2QKI
chr6157187777157187896+intron-Distal4.445314.79379K562KHSRP
chr6157259349157259416+intron-Distal3.672595.08363HepG2KHSRP
chr6157289133157289225+intron-Distal3.631695.13840HepG2MATR3
chr6157258890157258951+intron-Distal3.135343.92782HepG2KHSRP
chr6157259557157259589+intron-Distal3.064476.21802K562KHSRP
chr6157393740157393826+intron-Distal3.855033.42844K562KHSRP
chr6157235115157235185+intron-Distal5.4492012.21867HepG2HNRNPK
chr6157318437157318564+intron-Distal4.1803914.45525K562KHSRP
chr6157184966157185021+intron-Distal4.332633.97018HepG2HNRNPM
chr6157290075157290145+intron-Distal3.9740114.96110HepG2HNRNPM
chr6157153722157153799+intron-Distal5.0118612.60500HepG2HNRNPM
chr6157509381157509503+intron-Distal4.713577.41617HepG2CSTF2
chr6157258316157258392+intron-Distal5.3797020.39817K562EXOSC5
chr6157369698157369756+intron-Distal3.870743.22073HepG2KHSRP
chr6157297818157297918+intron-Distal,intron-Proximal3.971885.79512K562LSM11
chr6157259609157259639+intron-Distal4.5026910.17772K562KHSRP
chr6157288369157288525+intron-Distal5.6446813.27457K562HNRNPL
chr6157119275157119332+intron-Distal3.910688.14424HepG2HNRNPM
chr6157343337157343388+intron-Distal4.564414.96496K562NONO
chr6157288396157288418+intron-Distal4.063908.93727HepG2HNRNPL
chr6157469053157469100+intron-Distal5.359446.42388HepG2DDX59
chr6157259639157259668+intron-Distal5.7330612.19503K562KHSRP
chr6157343087157343174+intron-Distal3.022634.73159HepG2SFPQ
chr6157153744157153803+intron-Distal3.981523.28572K562HNRNPM
chr6157161904157161928+intron-Distal4.079753.78432HepG2MATR3
chr6157151757157151817+intron-Distal4.196293.49011K562KHSRP
chr6157282873157282926+intron-Distal3.110983.68839K562KHSRP
chr6157469044157469119+intron-Distal3.194375.68177HepG2CSTF2T
chr6157258342157258376+intron-Distal3.874558.59134HepG2HNRNPM
chr6157361614157361667+intron-Distal4.422344.07628HepG2PTBP1
chr6157304692157304755+intron-Distal4.319157.67565HepG2HNRNPM
chr6157143859157144002+intron-Distal4.372174.28571K562HNRNPM
chr6157361437157361503+intron-Distal3.733883.59803HepG2PTBP1
chr6157186754157186804+intron-Distal3.874823.30744K562PTBP1
chr6157258772157258854+intron-Distal4.2068614.32636HepG2HNRNPM
chr6157256939157257002+intron-Distal5.7031812.99096K562EXOSC5
chr6157258229157258318+intron-Distal3.759724.32378K562HNRNPM
chr6157183901157183963+intron-Distal6.2415719.22122HepG2HNRNPM
chr6157259589157259609+intron-Distal3.568027.29915K562KHSRP
chr6157258490157258567+intron-Distal5.486589.21000K562HNRNPM
chr6157261871157261895+intron-Distal4.184903.97018HepG2HNRNPM
chr6157195867157195919+intron-Distal3.381214.35402HepG2SUGP2
chr6157258760157258860+intron-Distal3.507495.10441K562HNRNPM
chr6157153425157153475+intron-Distal3.689934.38996HepG2HNRNPM
chr6157313367157313429+intron-Distal4.261183.87294K562TARDBP
chr6157258280157258329+intron-Distal4.232489.40568HepG2HNRNPM
chr6157161233157161296+intron-Distal3.806293.06015K562MATR3
chr6157354744157354798+intron-Distal3.462093.42785HepG2HNRNPM
chr6157342714157342739+intron-Distal4.499814.66110HepG2SFPQ
chr6157338233157338307+intron-Distal3.591924.06432HepG2KHSRP
chr6157173740157173813+intron-Distal3.330425.61622HepG2QKI
chr6157288368157288396+intron-Distal4.254876.22518HepG2HNRNPL
chr6157288627157288745+intron-Distal4.211268.49253K562TARDBP
chr6157338033157338093+intron-Distal3.450405.35459K562KHSRP
chr6157312191157312239+intron-Distal3.707586.91567HepG2QKI
chr6157468963157469034+intron-Distal6.2586812.91829HepG2PCBP2
chr6157261591157261674+intron-Distal3.973458.93039HepG2HNRNPM
chr6157476958157477126+intron-Distal3.955563.24593HepG2XPO5
chr6157300024157300089+intron-Distal5.1451014.71518HepG2U2AF2
chr6157318349157318411+intron-Distal3.124343.80334HepG2U2AF2
chr6157468895157468934+intron-Distal5.043356.79054HepG2PCBP2
chr6157304951157304992+intron-Distal4.121903.78162K562HNRNPM
chr6157281562157281659+intron-Distal3.357913.10946HepG2SFPQ
chr6157487448157487525+intron-Distal4.363554.55788HepG2QKI
chr6157196876157197037+intron-Distal3.911536.25598K562KHSRP
chr6157119385157119440+intron-Distal3.878373.40087HepG2RBFOX2
chr6157327113157327176+intron-Distal4.319629.62214HepG2PCBP2
chr6157342518157342561+intron-Distal3.432723.71918HepG2XRN2
chr6157373400157373511+intron-Distal4.782055.10338HepG2KHSRP
chr6157131518157131571+intron-Distal4.8191511.05298HepG2HNRNPM
chr6157161317157161406+intron-Distal4.8107515.32361K562PTBP1
chr6157300159157300246+intron-Distal3.387845.37079HepG2CSTF2
chr6157161555157161603+intron-Distal4.442673.78162K562HNRNPM
chr6157468140157468210+intron-Distal5.002155.92007HepG2DDX59
chr6157261710157261761+intron-Distal4.935865.72853HepG2HNRNPM
chr6157311323157311337+intron-Distal3.922975.42334HepG2QKI
chr6157337981157338033+intron-Distal3.166843.73266K562KHSRP
chr6157193096157193199+intron-Distal4.012783.92684K562KHSRP
chr6157472190157472287+intron-Distal4.5178010.88507HepG2RBFOX2
chr6157148911157148966+intron-Distal3.116173.85440HepG2HNRNPC
chr6157191411157191489+intron-Distal3.446353.90141HepG2SFPQ
chr6157153892157153940+intron-Distal3.406576.18434HepG2HNRNPM
chr6157282751157282822+intron-Distal3.356223.93303HepG2HNRNPM
chr6157119812157119885+intron-Distal3.247674.23271HepG2HNRNPM
chr6157288439157288458+intron-Distal3.095694.63384HepG2HNRNPL
chr6157183820157183962+intron-Distal5.5080112.60709K562HNRNPM
chr6157312064157312144+intron-Distal7.4856039.23516HepG2QKI
chr6157258456157258522+intron-Distal4.997965.43487HepG2EXOSC5
chr6157195377157195424+intron-Distal3.058864.88763HepG2SUGP2
chr6157160386157160476+intron-Distal3.8877611.24359HepG2HNRNPM
chr6157258321157258395+intron-Distal4.655865.97091K562TARDBP
chr6157292803157292847+intron-Distal4.584774.94096HepG2SFPQ
chr6157342947157343057+intron-Distal3.636038.60765HepG2CSTF2T
chr6157311973157312057+intron-Distal5.9770911.86079HepG2QKI
chr6157259456157259505+intron-Distal4.159233.62366HepG2HNRNPM
chr6157259337157259431+intron-Distal3.134216.10661K562KHSRP
chr6157235185157235314+intron-Distal6.4413525.05198HepG2HNRNPK
chr6157343325157343411+intron-Distal3.038454.95687K562CSTF2T
chr6157303654157303711+intron-Distal3.269585.37771HepG2PTBP1
chr6157300104157300240+intron-Distal4.320259.06199K562KHSRP
chr6157343308157343400+intron-Distal5.2142326.68942HepG2CSTF2T
chr6157393867157393946+intron-Distal4.311646.08171HepG2QKI
chr6157299092157299223+intron-Distal3.598773.98203K562MATR3
chr6157364266157364410+intron-Distal4.8027710.58655HepG2QKI
chr6157319126157319201+intron-Distal3.425893.14895K562NONO
chr6157183846157183901+intron-Distal5.9102513.96605HepG2HNRNPM
chr6157271706157271769+intron-Distal3.233064.35650K562KHSRP
chr6157489246157489323+intron-Distal3.001343.31456K562TIA1
chr6157258274157258323+intron-Distal3.987973.22073HepG2KHSRP
chr6157337768157337828+intron-Distal4.485565.34107HepG2KHSRP
chr6157161306157161415+intron-Distal3.8101012.96674HepG2PTBP1
chr6157187311157187366+intron-Distal4.263214.32882HepG2MATR3
chr6157343325157343407+intron-Distal4.357648.05260K562GTF2F1
chr6157342669157342718+intron-Distal3.257957.33857HepG2CSTF2T
chr6157342773157342852+intron-Distal4.861526.16396K562NONO
chr6157343339157343375+intron-Distal3.512583.64140HepG2SFPQ
chr6157303170157303236+intron-Distal3.070725.59193HepG2HNRNPC
chr6157468976157469036+intron-Distal4.302517.31982HepG2DDX59
chr6157343004157343040+intron-Distal3.760703.30664K562NONO
chr6157468445157468533+intron-Distal4.361096.61028HepG2CSTF2T
chr6157410078157410199+intron-Distal4.447659.21479HepG2PTBP1
chr6157299007157299073+intron-Distal3.599395.56133HepG2SUGP2
chr6157259505157259570+intron-Distal3.426665.64899HepG2KHSRP
chr6157437344157437443+intron-Distal3.103143.28644HepG2QKI
chr6157472175157472309+intron-Distal3.311218.44114K562RBFOX2
chr6157487329157487431+intron-Distal3.121716.09167HepG2QKI
chr6157372737157372827+intron-Distal4.3607910.17772K562KHSRP
chr6157327012157327058+intron-Distal3.370803.94088HepG2QKI
chr6157119278157119373+intron-Distal4.129454.02846K562HNRNPM
chr6157186746157186838+intron-Distal4.642625.75114HepG2PTBP1
chr6157259570157259644+intron-Distal3.139256.49920HepG2KHSRP
chr6157338233157338326+intron-Distal3.544375.28432HepG2CSTF2
chr6157195226157195272+intron-Distal3.233485.35016HepG2SUGP2
chr6157259921157259975+intron-Distal3.081885.36888K562KHSRP
chr6157215423157215511+intron-Distal3.835443.30889K562GTF2F1
chr6157292818157292905+intron-Distal3.803933.07008K562NONO
chr6157153569157153671+intron-Distal4.350899.06892HepG2HNRNPM
chr6157262146157262180+intron-Distal4.216973.97018HepG2HNRNPM
chr6157327119157327233+intron-Distal3.077813.47356HepG2HNRNPK
chr6157271664157271706+intron-Distal3.720303.02234K562KHSRP
chr6157321845157321918+intron-Distal3.617774.25372HepG2HNRNPC
chr6157329233157329289+intron-Distal4.007306.57428HepG2PTBP1
chr6157264298157264355+intron-Distal3.128873.73266K562KHSRP
chr6157440292157440392+intron-Distal3.214103.51804HepG2HNRNPL
chr6157258495157258604+intron-Distal4.8544922.14891HepG2HNRNPM
chr6157147191157147276+intron-Distal4.220093.72398HepG2SFPQ
chr6157290016157290084+intron-Distal4.272156.77280K562HNRNPM
chr6157342773157342836+intron-Distal4.3596617.17647HepG2CSTF2T
chr6157261500157261563+intron-Distal4.069607.32988HepG2HNRNPM
chr6157258655157258734+intron-Distal4.593619.77080HepG2HNRNPM
chr6157278724157278809+intron-Distal3.982083.06150K562KHSRP
chr6157256858157257012+intron-Distal5.542099.21000K562HNRNPM
chr6157194030157194130+intron-Distal3.270763.34056HepG2MATR3
chr6157162345157162430+intron-Distal3.828786.48659HepG2SUGP2
chr6157288458157288510+intron-Distal3.362324.33109HepG2HNRNPL
chr6157342369157342446+intron-Distal4.455595.25203HepG2CSTF2
chr6157285908157285960+intron-Distal3.827013.22073HepG2KHSRP
chr6157342368157342421+intron-Distal3.051143.18103HepG2FUS
chr6157343286157343395+intron-Distal5.2269310.55630HepG2PRPF4
chr6157319139157319188+intron-Distal3.361394.79189HepG2SFPQ
chr6157318281157318350+intron-Distal4.2689410.17772K562KHSRP
chr6157137846157137956+intron-Distal5.419647.23521HepG2HNRNPM
chr6157143646157143711+intron-Distal3.490714.14896HepG2HNRNPM
chr6157495018157495099+intron-Distal,intron-Proximal3.9429820.10147HepG2U2AF2
chr6157343320157343376+intron-Distal4.034866.19111HepG2XRN2
chr6157326286157326383+intron-Distal3.293455.42728HepG2HNRNPM
chr6157258163157258349+intron-Distal4.5641812.58987HepG2EXOSC5
chr6157309078157309184+intron-Distal3.225113.93901K562KHSRP
chr6157319215157319268+intron-Distal3.382583.12686HepG2SFPQ
chr6157337914157337967+intron-Distal4.149293.90026K562KHSRP
chr6157372633157372730+intron-Distal3.803356.89441K562KHSRP
chr6157342370157342440+intron-Distal3.144149.49360HepG2CSTF2T
chr6157351676157351753+intron-Distal3.170413.58549K562NONO
chr6157235092157235198+intron-Distal6.3978517.24230HepG2DDX59
chr6157468469157468552+intron-Distal6.0139010.66887HepG2PCBP2
chr6157160368157160448+intron-Distal3.118923.48816HepG2MATR3
chr6157446205157446282+intron-Distal4.102143.34098HepG2HNRNPM
chr6157364333157364469+intron-Distal4.401458.48623HepG2PCBP2
chr6157284478157284624+intron-Distal3.257095.87019HepG2SFPQ
chr6157258318157258399+intron-Distal4.790425.04680K562HNRNPM
chr6157161315157161394+intron-Distal4.677658.01961HepG2MATR3
chr6157282558157282689+intron-Distal3.8239512.57380HepG2HNRNPM
chr6157165054157165114+intron-Distal6.0340118.32669HepG2RBFOX2
chr6157289993157290129+intron-Distal3.685147.19103K562TARDBP
chr6157261803157261874+intron-Distal5.118218.36716K562EXOSC5
chr6157258324157258393+intron-Distal4.394054.45763HepG2BCCIP
chr6157282767157282862+intron-Distal4.413134.33692K562NONO
chr6157261607157261672+intron-Distal3.951865.80877K562EXOSC5
chr6157311337157311366+intron-Distal4.191586.74598HepG2QKI
chr6157354228157354340+intron-Distal3.177523.73766HepG2SFPQ
chr6157472183157472294+intron-Distal5.7808117.43395K562DROSHA
chr6157360662157360732+intron-Distal4.220765.39628K562PTBP1
chr6157300136157300237+intron-Distal3.010073.90086HepG2KHSRP
chr6157162186157162260+intron-Distal3.903766.98738HepG2SUGP2
chr6157259261157259296+intron-Distal3.164774.46778K562EXOSC5
chr6157187327157187487+intron-Distal5.3939811.08939HepG2SUGP2
chr6157372744157372792+intron-Distal4.595035.64557HepG2KHSRP
chr6157276641157276700+intron-Distal3.001243.46531K562KHSRP
chr6157259515157259568+intron-Distal3.482414.28420HepG2HNRNPM
chr6157289896157289954+intron-Distal3.511738.73473HepG2HNRNPM
chr6157269888157269946+intron-Distal3.190575.58362HepG2U2AF2
chr6157257002157257064+intron-Distal3.783298.17180K562EXOSC5
chr6157276077157276174+intron-Distal5.274276.29945HepG2XPO5
chr6157288840157289001+intron-Distal3.5531310.21331K562KHSRP
chr6157306806157306860+intron-Distal3.165434.40876HepG2CSTF2
chr6157313234157313292+intron-Distal3.398154.65797K562TARDBP
chr6157472226157472291+intron-Distal4.226498.34313K562DDX6
chr6157285874157285991+intron-Distal5.4861710.61662K562KHSRP
chr6157360817157360883+intron-Distal4.333343.53723HepG2PTBP1
chr6157256799157256926+intron-Distal,intron-Proximal4.9290713.51953K562EXOSC5
chr6157228632157228759+intron-Distal3.753575.42334HepG2QKI
chr6157321321157321389+intron-Distal4.015454.04612HepG2HNRNPU
chr6157282520157282673+intron-Distal3.553454.08493K562HNRNPM
chr6157295884157295958+intron-Distal4.044745.29549HepG2HNRNPL
chr6157327111157327191+intron-Distal3.457734.93942K562PTBP1
chr6157131104157131195+intron-Distal4.700305.52571HepG2RBFOX2
chr6157258577157258603+intron-Distal3.575776.13018K562EXOSC5
chr6157124550157124669+intron-Distal4.428287.59321K562PTBP1
chr6157303742157303805+intron-Distal4.254728.82644HepG2PTBP1
chr6157256841157256896+intron-Distal4.168327.67565HepG2HNRNPM
chr6157290084157290144+intron-Distal3.432104.86246K562HNRNPM
chr6157343311157343382+intron-Distal4.2655812.40838HepG2GTF2F1
chr6157131096157131197+intron-Distal4.508534.14162K562RBFOX2
chr6157329231157329290+intron-Distal4.746994.67693K562PTBP1
chr6157304949157305009+intron-Distal4.7415710.12287HepG2HNRNPM
chr6157361095157361140+intron-Distal5.5394717.10652K562PTBP1
chr6157303745157303798+intron-Distal5.397587.34317K562PTBP1
chr6157470098157470127+intron-Proximal4.747598.01338K562AQR
chr6157495251157495294+intron-Proximal4.549854.48002K562AQR
chr6157488332157488408+intron-Proximal3.361837.06578HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARID1B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARID1B is not available on ENCORE database.

  • 64 RBPs can affect the levels of ARID1B.  








The Knockdown/knockout RNA-Seq assay for ARID1B is not available on ENCORE database.





64 RBPs can affect the gene expression of ARID1B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARID1BENSG00000049618.171083.961502327.60990-1.1025016.3472015.16260HepG2AKAP1
ARID1BENSG00000049618.171177.913501610.73310-0.451503.567802.50510HepG2BCCIP
ARID1BENSG00000049618.171104.793901399.48550-0.341102.285801.47060HepG2BCLAF1
ARID1BENSG00000049618.171222.396001730.95390-0.501906.577905.45550HepG2CALR
ARID1BENSG00000049618.171219.494701634.02480-0.422104.074803.26630HepG2DDX21
ARID1BENSG00000049618.17926.243301199.53940-0.373002.769401.37830HepG2DDX28
ARID1BENSG00000049618.171815.767902229.61240-0.296201.913101.38320HepG2DDX3X
ARID1BENSG00000049618.171016.601201583.74540-0.639606.342205.22920HepG2DDX55
ARID1BENSG00000049618.171159.678501426.67200-0.298902.241701.36060HepG2DHX30
ARID1BENSG00000049618.171564.857902034.67660-0.378802.517201.90630HepG2EIF4A3
ARID1BENSG00000049618.173053.150101981.176600.623805.074104.16100HepG2EIF4B
ARID1BENSG00000049618.172748.408903159.03330-0.200902.401601.83400HepG2ETF1
ARID1BENSG00000049618.171443.327401952.76720-0.436102.525301.45590HepG2FUS
ARID1BENSG00000049618.171752.738902299.68400-0.391802.930602.27360HepG2GPKOW
ARID1BENSG00000049618.171621.498302034.08200-0.327104.314603.19130HepG2HNRNPA2B1
ARID1BENSG00000049618.171753.912502016.05090-0.201002.427001.79160HepG2HNRNPL
ARID1BENSG00000049618.171654.713502194.63310-0.407403.578202.87220HepG2HNRNPLL
ARID1BENSG00000049618.171543.459001852.10200-0.263002.215501.36350HepG2HNRNPM
ARID1BENSG00000049618.171381.000501685.52160-0.287504.365203.46390HepG2ILF2
ARID1BENSG00000049618.17975.370001401.25030-0.522703.196301.76400HepG2ILF3
ARID1BENSG00000049618.171634.793302053.83260-0.329202.226801.63610HepG2MAGOH
ARID1BENSG00000049618.171543.557702172.50450-0.493106.385705.20440HepG2MSI2
ARID1BENSG00000049618.17943.321801313.76950-0.477902.222501.44210HepG2PABPC1
ARID1BENSG00000049618.17938.826301221.40990-0.379602.823002.00550HepG2PRPF8
ARID1BENSG00000049618.171636.828002095.01270-0.356103.357902.71000HepG2PUF60
ARID1BENSG00000049618.171541.127501975.63800-0.358306.052905.20480HepG2PUS1
ARID1BENSG00000049618.172378.054302047.570100.215802.571501.97380HepG2RECQL
ARID1BENSG00000049618.171104.081801469.48250-0.412506.744705.80460HepG2SAFB2
ARID1BENSG00000049618.173322.143102982.201600.155601.882701.44540HepG2SRFBP1
ARID1BENSG00000049618.171868.076302146.60640-0.200502.100201.67230HepG2SRSF1
ARID1BENSG00000049618.172357.802502068.565500.188702.092201.53860HepG2SRSF5
ARID1BENSG00000049618.172059.201201746.418100.237603.058102.48330HepG2SRSF9
ARID1BENSG00000049618.172181.300902589.26120-0.247403.348402.79610HepG2SSB
ARID1BENSG00000049618.171255.640701576.50080-0.328302.333501.70560HepG2SUPV3L1
ARID1BENSG00000049618.171780.319702139.15640-0.264901.933901.31320HepG2TARDBP
ARID1BENSG00000049618.171013.312901603.34960-0.6620010.9810010.09890HepG2TIAL1
ARID1BENSG00000049618.17721.26870931.22380-0.368602.556201.82740HepG2UCHL5
ARID1BENSG00000049618.171887.230202439.44490-0.370306.930805.90830HepG2UPF1
ARID1BENSG00000049618.17888.338001443.34610-0.700205.785804.29500HepG2UPF2
ARID1BENSG00000049618.171095.418201551.89500-0.502504.894803.93860HepG2XRN2
ARID1BENSG00000049618.171598.430401919.94540-0.264403.798503.03360HepG2ZC3H8
ARID1BENSG00000049618.171613.048602682.92260-0.7340029.6155028.31720HepG2ZNF622
ARID1BENSG00000049618.171816.153002140.49980-0.237102.249401.43370K562ATP5C1
ARID1BENSG00000049618.171594.489601315.932900.276902.843101.50870K562BCCIP
ARID1BENSG00000049618.173348.073502471.683000.437704.957504.12120K562DDX47
ARID1BENSG00000049618.171738.761801049.981200.727605.054103.65700K562EIF3A
ARID1BENSG00000049618.172274.870601418.756800.681104.839603.42270K562EIF3D
ARID1BENSG00000049618.171370.70300827.058100.7288013.3292011.54990K562EIF3G
ARID1BENSG00000049618.171678.251701243.533900.432404.422203.38460K562EIF4A3
ARID1BENSG00000049618.173676.691602731.518200.428608.888707.24090K562EIF4G2
ARID1BENSG00000049618.171370.327201845.19170-0.429303.814402.80920K562FIP1L1
ARID1BENSG00000049618.171645.843601293.229200.347704.426803.68570K562FXR1
ARID1BENSG00000049618.17589.89850811.03060-0.459302.565001.88910K562G3BP2
ARID1BENSG00000049618.171717.538702485.29250-0.533107.531806.27090K562GRSF1
ARID1BENSG00000049618.171082.235301517.62810-0.487803.985902.85430K562HNRNPM
ARID1BENSG00000049618.171815.795502501.78430-0.462405.080604.01510K562HSPD1
ARID1BENSG00000049618.171519.777201202.642000.337602.818601.61300K562IGF2BP3
ARID1BENSG00000049618.171516.147501242.459900.287102.307601.53640K562MAGOH
ARID1BENSG00000049618.171630.458601899.49850-0.220302.533601.75860K562MTPAP
ARID1BENSG00000049618.171368.349501105.426300.307702.318601.42740K562PCBP2
ARID1BENSG00000049618.171464.701602094.55890-0.516005.766204.50790K562PPIG
ARID1BENSG00000049618.171029.195401289.65800-0.325502.329501.63910K562PRPF8
ARID1BENSG00000049618.171547.931001217.961700.345802.575201.52550K562NELFE
ARID1BENSG00000049618.171584.883301143.286100.471104.058502.81590K562RPS3
ARID1BENSG00000049618.172071.657501624.790300.350403.377102.17940K562SAFB
ARID1BENSG00000049618.171060.31850843.134900.330602.813001.95020K562SF3B4
ARID1BENSG00000049618.172424.815202133.563400.184502.204801.36120K562SRPK2
ARID1BENSG00000049618.171382.742301103.676800.325102.662901.63620K562SRSF4
ARID1BENSG00000049618.171474.758201197.648900.300202.050001.43490K562TARDBP
ARID1BENSG00000049618.172449.754401991.212600.298904.929403.82880K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARID1B is not available on ENCORE database.





24 RBPs can affect the splicing of ARID1B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARID1BENSG00000049618.17chr6+157495980157496139157495141157495251157502102157502312-0.324000.000030.00091excludedHepG2U2AF1
SEARID1BENSG00000049618.17chr6+157454161157454341157431605157431695157469757157470085-0.163000.002980.05020excludedHepG2U2AF1
SEARID1BENSG00000049618.17chr6+1574718581574719871574699231574700851574881731574883190.241000.000430.05080includedK562FMR1
SEARID1BENSG00000049618.17chr6+157192747157192786157150360157150555157222509157222659-0.060000.000770.07927excludedK562FMR1
SEARID1BENSG00000049618.17chr6+157495980157496139157495159157495251157502102157502312-0.250000.000500.09451excludedHepG2DKC1
SEARID1BENSG00000049618.17chr6+1574959801574961391574951411574952511575021021575023120.350000.000000.00003includedHepG2HNRNPK
SEARID1BENSG00000049618.17chr6+1574718581574719871574699231574700851574881731574883190.157000.000080.01123includedHepG2QKI
SEARID1BENSG00000049618.17chr6+157192747157192786157150360157150555157222509157222659-0.060000.000380.07568excludedK562METAP2
SEARID1BENSG00000049618.17chr6+1573579681573580101572565991572567101574057951574060390.258000.003480.09878includedK562FXR1
SEARID1BENSG00000049618.17chr6+157357968157358010157256599157256710157405795157406039-0.240000.000000.00000excludedK562PUS1
SEARID1BENSG00000049618.17chr6+157495980157496139157495141157495251157502102157502312-0.266000.000110.01214excludedHepG2HNRNPL
SEARID1BENSG00000049618.17chr6+1574718581574719871574699231574700851574881731574883190.112000.000650.08984includedHepG2RBM15
SEARID1BENSG00000049618.17chr6+1574959801574961391574951411574952511575021021575023120.219000.002000.07776includedHepG2SF3B4
SEARID1BENSG00000049618.17chr6+157357968157358010157256599157256710157405795157406039-0.209000.000240.01142excludedK562UTP18
SEARID1BENSG00000049618.17chr6+157431605157431695157405795157406039157454161157454341-0.080000.003960.09399excludedK562UTP18
SEARID1BENSG00000049618.17chr6+1574718581574719871574699231574700851574881731574883190.132000.000980.08542includedHepG2TAF15
SEARID1BENSG00000049618.17chr6+157495980157496139157495159157495251157502102157502312-0.303000.001120.02204excludedK562U2AF2
SEARID1BENSG00000049618.17chr6+157495980157496139157495141157495251157502102157502312-0.162000.001910.06175excludedK562HNRNPU
SEARID1BENSG00000049618.17chr6+157357968157358010157256599157256710157405795157406039-0.184000.000970.02712excludedK562AGGF1
SEARID1BENSG00000049618.17chr6+1574718581574719871574699231574700851574881731574883190.185000.001050.09200includedK562CPSF6
SEARID1BENSG00000049618.17chr6+157192747157192786157150360157150555157222509157222659-0.060000.000200.02961excludedK562CPSF6
SEARID1BENSG00000049618.17chr6+157495980157496139157495141157495251157502102157502312-0.301000.000150.05605excludedHepG2XRN2
SEARID1BENSG00000049618.17chr6+1574959801574961391574951411574952511575021021575023120.239000.000660.02793includedHepG2HNRNPC
SEARID1BENSG00000049618.17chr6+157471858157471987157469923157470085157488173157488319-0.357000.000090.02458excludedK562NPM1
SEARID1BENSG00000049618.17chr6+1574718581574719871574699231574700851574881731574883190.200000.001150.02172includedK562HNRNPC
SEARID1BENSG00000049618.17chr6+1574959801574961391574951411574952511575021021575023120.096000.001940.03312includedK562HNRNPC
MXEARID1BENSG00000049618.17chr6+157454161157454341157469757157470085157431605157431695157488173157488319-0.262000.001080.019352includedK562DROSHA
MXEARID1BENSG00000049618.17chr6+1574057951574060391574316051574316951572565991572567101574541611574543410.238000.000030.001191includedK562PUS1
MXEARID1BENSG00000049618.17chr6+157454161157454341157469757157470085157431605157431695157488173157488319-0.292000.000110.012892includedHepG2NOLC1
MXEARID1BENSG00000049618.17chr6+1574541611574543411574697571574700851574316051574316951574881731574883190.199000.005780.091311includedHepG2DDX55
MXEARID1BENSG00000049618.17chr6+1574316051574316951574541611574543411574057951574060391574697571574700850.111000.001010.008181includedHepG2U2AF2
MXEARID1BENSG00000049618.17chr6+1574316051574316951574541611574543411574057951574060391574697571574700850.199000.001850.054101includedHepG2PCBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARID1B is not avaliable on ENCORE database.