SERPINA4

General Information

Gene Name       : SERPINA4
Gene ID             : ENSG00000100665.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SERPINA4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SERPINA4ENSG00000100665.110.000.000.00ENCSR000AEF
HepG2SERPINA4ENSG00000100665.1132.1629.3030.73ENCSR985KAT
K562SERPINA4ENSG00000100665.110.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SERPINA4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SERPINA4 RNA is bound by 5 proteins.  







eCLIP assay for SERPINA4 is not avaliable on ENCORE database.





5 proteins are bound to SERPINA4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr149503599995036077+3'-UTR,intron-Distal3.749267.13688HepG2UPF1
chr149503607795036162+3'-UTR,intron-Distal5.1954812.76496HepG2UPF1
chr149503606495036187+3'-UTR,intron-Distal4.3945418.42593HepG2LARP4
chr149503600795036064+3'-UTR,intron-Distal5.3655010.28790HepG2LARP4
chr149503606195036158+3'-UTR,intron-Distal5.019537.48708HepG2AKAP1
chr149503587095035932+3'-UTR,CDS,intron-Distal3.603465.56131HepG2SND1
chr149503337695033432+CDS,intron-Distal3.547175.82787HepG2SND1
chr149503040895030469+CDS,intron-Distal,intron-Proximal3.807313.23259HepG2LIN28B
chr149503014595030267+CDS,intron-Distal3.9039613.58233HepG2SND1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SERPINA4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SERPINA4 is not available on ENCORE database.

  • 138 RBPs can affect the levels of SERPINA4.  








The Knockdown/knockout RNA-Seq assay for SERPINA4 is not available on ENCORE database.





138 RBPs can affect the gene expression of SERPINA4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SERPINA4ENSG00000100665.7482.80480885.21690-0.874609.694307.85250HepG2AATF
SERPINA4ENSG00000100665.72084.211601305.627800.674707.646306.18860HepG2ABCF1
SERPINA4ENSG00000100665.7658.086701063.80560-0.6929013.5693012.43750HepG2ACO1
SERPINA4ENSG00000100665.71100.09590638.831300.784009.466407.77450HepG2ADAR
SERPINA4ENSG00000100665.7697.366502423.79380-1.7973039.4369037.75380HepG2AKAP1
SERPINA4ENSG00000100665.71819.887001346.551800.434503.126502.02070HepG2AKAP8
SERPINA4ENSG00000100665.71722.275201068.683900.6884015.9010014.27560HepG2AKAP8L
SERPINA4ENSG00000100665.7940.09770487.259700.948004.579302.34900HepG2APOBEC3C
SERPINA4ENSG00000100665.7914.16910682.012700.422602.158801.33520HepG2BCCIP
SERPINA4ENSG00000100665.71433.38490592.571601.2743019.5298017.49100HepG2BCLAF1
SERPINA4ENSG00000100665.7577.23620801.18110-0.473003.754903.06860HepG2BOP1
SERPINA4ENSG00000100665.71264.08830978.088100.370002.991701.71150HepG2BUD13
SERPINA4ENSG00000100665.71617.93810792.012201.0305023.7226021.88990HepG2CALR
SERPINA4ENSG00000100665.71569.612601173.577600.419402.543401.61400HepG2CCAR1
SERPINA4ENSG00000100665.73895.417001905.345701.0316020.3413018.47870HepG2CIRBP
SERPINA4ENSG00000100665.7862.857101063.43030-0.301503.432702.70680HepG2CKAP4
SERPINA4ENSG00000100665.7327.04520521.74860-0.673903.426702.56840HepG2CNOT7
SERPINA4ENSG00000100665.72035.19510735.503201.4683035.7991033.72390HepG2CPSF6
SERPINA4ENSG00000100665.71527.570601075.065000.506705.653504.11190HepG2CPSF7
SERPINA4ENSG00000100665.7685.20670421.211300.701906.214704.70190HepG2CSTF2
SERPINA4ENSG00000100665.7901.922001115.35270-0.306402.646502.01570HepG2CELF1
SERPINA4ENSG00000100665.71634.014101199.148200.446309.184207.95860HepG2DAZAP1
SERPINA4ENSG00000100665.71039.24100656.027700.663609.992308.01880HepG2DDX1
SERPINA4ENSG00000100665.72714.26640975.753801.4759044.0200041.80040HepG2DDX21
SERPINA4ENSG00000100665.71301.37300955.603700.445504.777203.56460HepG2DDX24
SERPINA4ENSG00000100665.71040.18220627.384100.729304.997303.32980HepG2DDX27
SERPINA4ENSG00000100665.7984.99770763.641400.367102.975301.56760HepG2DDX52
SERPINA4ENSG00000100665.71554.44210835.226100.896106.262304.82120HepG2DDX59
SERPINA4ENSG00000100665.72657.681501201.138801.1457024.6999022.23530HepG2DDX5
SERPINA4ENSG00000100665.71306.19920620.435801.0739019.9221017.72250HepG2DHX30
SERPINA4ENSG00000100665.71991.601301017.736500.9685030.8612029.23050HepG2DKC1
SERPINA4ENSG00000100665.7938.19080643.272700.544406.975605.89950HepG2DNAJC21
SERPINA4ENSG00000100665.71107.54450637.591200.7966019.4686017.89020HepG2DNAJC2
SERPINA4ENSG00000100665.72002.56070911.068201.1361020.8169018.70030HepG2EEF2
SERPINA4ENSG00000100665.73091.758301917.333700.689208.767107.75130HepG2EIF2S1
SERPINA4ENSG00000100665.7452.30380739.55560-0.709405.833404.55480HepG2EIF3D
SERPINA4ENSG00000100665.71499.76320921.944500.7019011.248809.37480HepG2EIF3G
SERPINA4ENSG00000100665.7691.191602063.04020-1.5776024.7500022.85290HepG2EIF4B
SERPINA4ENSG00000100665.71507.143701133.357200.411103.698402.76600HepG2EIF4G2
SERPINA4ENSG00000100665.71686.206501130.909100.576206.299204.72530HepG2ESF1
SERPINA4ENSG00000100665.71330.071701662.57590-0.321904.285403.56510HepG2ETF1
SERPINA4ENSG00000100665.7947.91630661.035900.519905.674903.95690HepG2FAM120A
SERPINA4ENSG00000100665.7509.662301318.33960-1.3711020.5441018.79470HepG2FIP1L1
SERPINA4ENSG00000100665.7846.15320558.132500.600204.053102.53860HepG2FKBP4
SERPINA4ENSG00000100665.71621.129701121.974400.530904.641702.50100HepG2FMR1
SERPINA4ENSG00000100665.71016.759001645.55040-0.6946010.428408.95180HepG2FUBP3
SERPINA4ENSG00000100665.71863.166601023.402900.864308.215006.40150HepG2FUS
SERPINA4ENSG00000100665.7901.840802137.89040-1.2452023.9966022.18440HepG2FXR1
SERPINA4ENSG00000100665.71356.486601983.18300-0.547905.045904.15970HepG2G3BP1
SERPINA4ENSG00000100665.71160.95510852.731500.445003.006801.94280HepG2GNB2L1
SERPINA4ENSG00000100665.71478.55240833.682500.826508.902307.79710HepG2GPKOW
SERPINA4ENSG00000100665.7727.12310483.002000.590103.372902.13980HepG2GRSF1
SERPINA4ENSG00000100665.71869.02520649.435501.5249041.6085039.69890HepG2HNRNPA1
SERPINA4ENSG00000100665.71414.054401102.114100.359504.712403.54410HepG2HNRNPA2B1
SERPINA4ENSG00000100665.71346.86890722.376500.8987013.8427012.40600HepG2HNRNPC
SERPINA4ENSG00000100665.7678.29840451.942100.585703.569601.83010HepG2HNRNPD
SERPINA4ENSG00000100665.71824.364801099.194800.7308018.6125016.96660HepG2HNRNPF
SERPINA4ENSG00000100665.7580.827202008.20810-1.7897049.9291047.31560HepG2HNRNPK
SERPINA4ENSG00000100665.73369.64820795.604702.0824062.5028060.16090HepG2HNRNPLL
SERPINA4ENSG00000100665.7737.62300909.51150-0.302202.166501.32510HepG2HNRNPM
SERPINA4ENSG00000100665.7875.10420717.600600.286202.525701.94640HepG2HNRNPU
SERPINA4ENSG00000100665.72220.724901082.397601.0367018.7451017.05040HepG2IGF2BP1
SERPINA4ENSG00000100665.71396.147902015.85370-0.529905.091804.20090HepG2IGF2BP2
SERPINA4ENSG00000100665.71150.548801891.82580-0.717502.531801.59560HepG2IGF2BP3
SERPINA4ENSG00000100665.7734.07250508.660800.529102.841001.49830HepG2ILF3
SERPINA4ENSG00000100665.71011.575601464.83390-0.534103.662802.21840HepG2KRR1
SERPINA4ENSG00000100665.71873.922301239.349000.596404.915703.79870HepG2LARP4
SERPINA4ENSG00000100665.7652.37620835.48810-0.356902.546701.46030HepG2LARP7
SERPINA4ENSG00000100665.71069.064502138.63700-1.0003015.6962014.19730HepG2MAGOH
SERPINA4ENSG00000100665.71761.803801066.840800.7236011.084209.57560HepG2MSI2
SERPINA4ENSG00000100665.71730.60010811.561401.0924011.447009.46580HepG2MTPAP
SERPINA4ENSG00000100665.71316.29430895.863000.555006.310404.49280HepG2NAA15
SERPINA4ENSG00000100665.71056.75290755.435300.484204.161502.40760HepG2NIP7
SERPINA4ENSG00000100665.7990.873001189.07980-0.263101.982701.33430HepG2NOL12
SERPINA4ENSG00000100665.7951.22870615.885600.627002.788601.69020HepG2NONO
SERPINA4ENSG00000100665.71680.73650705.504801.2523014.1341012.58360HepG2NSUN2
SERPINA4ENSG00000100665.71769.39770833.668501.085603.618101.52490HepG2NUFIP2
SERPINA4ENSG00000100665.72636.392001960.331000.427403.645302.82420HepG2PABPC4
SERPINA4ENSG00000100665.71287.645102066.88550-0.6827017.7419016.42010HepG2PCBP1
SERPINA4ENSG00000100665.71338.149601011.589000.403503.173401.32790HepG2PES1
SERPINA4ENSG00000100665.71162.04480801.536600.535703.787801.83020HepG2PHF6
SERPINA4ENSG00000100665.7924.02660640.042400.529703.072902.29950HepG2PPIL4
SERPINA4ENSG00000100665.72115.00330970.310401.1240041.7553039.50850HepG2PRPF4
SERPINA4ENSG00000100665.71593.654901018.326300.646004.406702.88810HepG2PRPF6
SERPINA4ENSG00000100665.7799.32490517.177900.628004.757803.73000HepG2PRPF8
SERPINA4ENSG00000100665.71406.511502103.09340-0.5804012.4177011.42370HepG2PTBP1
SERPINA4ENSG00000100665.71696.432401135.116700.579607.811406.87750HepG2PUF60
SERPINA4ENSG00000100665.7788.340101205.01860-0.6122012.2598011.19870HepG2PUM1
SERPINA4ENSG00000100665.72545.147401083.534001.2319055.2486053.22300HepG2PUS1
SERPINA4ENSG00000100665.7187.80760934.67070-2.3152028.7716026.73950HepG2RAVER1
SERPINA4ENSG00000100665.7717.668901389.60640-0.9533021.9302020.75290HepG2RBM22
SERPINA4ENSG00000100665.72848.154202067.206000.462206.070605.10770HepG2RBM25
SERPINA4ENSG00000100665.71714.994102179.86660-0.346005.407404.58170HepG2RECQL
SERPINA4ENSG00000100665.71539.083001184.034900.378303.299902.56390HepG2RPLP0
SERPINA4ENSG00000100665.71368.49620918.468300.575203.582102.50820HepG2RPS10
SERPINA4ENSG00000100665.71332.78480929.139000.520404.675903.65070HepG2RPS2
SERPINA4ENSG00000100665.71582.54530523.989601.5945024.9054022.61250HepG2RPS3A
SERPINA4ENSG00000100665.7299.15060511.58400-0.774105.616204.53290HepG2RRP9
SERPINA4ENSG00000100665.7763.76870639.055300.257102.072301.50180HepG2SAFB2
SERPINA4ENSG00000100665.7761.98410497.726900.614303.331901.62680HepG2SBDS
SERPINA4ENSG00000100665.7918.30570722.233100.346402.266701.41230HepG2SERBP1
SERPINA4ENSG00000100665.7951.582001597.06350-0.747006.431205.37810HepG2SF3A3
SERPINA4ENSG00000100665.71274.638602189.66320-0.7806022.2890020.87770HepG2SF3B4
SERPINA4ENSG00000100665.72269.006601088.486401.0596049.5167047.33350HepG2SLBP
SERPINA4ENSG00000100665.71733.30000912.269200.925904.082302.15540HepG2SLTM
SERPINA4ENSG00000100665.7937.66600745.246900.331303.660002.93750HepG2SMN1
SERPINA4ENSG00000100665.71361.84470876.192800.636103.838502.91170HepG2SNRNP70
SERPINA4ENSG00000100665.7848.012801569.51040-0.8882025.2684024.15220HepG2SRFBP1
SERPINA4ENSG00000100665.71744.996102285.50510-0.389306.995206.32620HepG2SRSF1
SERPINA4ENSG00000100665.7474.59810847.41260-0.836406.292504.72530HepG2SRSF3
SERPINA4ENSG00000100665.71919.974401079.907100.8301024.0575022.40030HepG2SRSF7
SERPINA4ENSG00000100665.71439.930301859.35500-0.368806.082705.32110HepG2SRSF9
SERPINA4ENSG00000100665.72434.670201362.708500.8371029.0081027.74550HepG2SSB
SERPINA4ENSG00000100665.71086.715901460.85410-0.426803.022801.68470HepG2SSRP1
SERPINA4ENSG00000100665.71045.777801274.62980-0.285503.034602.38840HepG2SUCLG1
SERPINA4ENSG00000100665.71100.044801478.65300-0.426702.644401.34990HepG2SUGP2
SERPINA4ENSG00000100665.71581.85060890.088500.8295014.0827012.08340HepG2SUPT6H
SERPINA4ENSG00000100665.71240.46020667.519600.893909.357908.23830HepG2SUPV3L1
SERPINA4ENSG00000100665.71098.496802054.22010-0.9031024.4315022.99210HepG2TAF15
SERPINA4ENSG00000100665.71845.71590775.647801.2506026.8665025.06210HepG2TARDBP
SERPINA4ENSG00000100665.72910.578601434.875601.020306.376404.83120HepG2TBRG4
SERPINA4ENSG00000100665.71350.506601887.63440-0.483106.327905.06980HepG2TIA1
SERPINA4ENSG00000100665.71010.83650697.284600.535606.184205.48990HepG2TIAL1
SERPINA4ENSG00000100665.71618.326201109.029700.545107.374605.83480HepG2TUFM
SERPINA4ENSG00000100665.7889.154501127.67580-0.342802.407701.81810HepG2U2AF1
SERPINA4ENSG00000100665.7240.91480394.30000-0.710805.052404.02110HepG2UCHL5
SERPINA4ENSG00000100665.71229.248501416.35250-0.204401.905801.30800HepG2UPF1
SERPINA4ENSG00000100665.71158.84010611.149700.923007.631605.90900HepG2UPF2
SERPINA4ENSG00000100665.71036.204501367.43060-0.400205.522204.72400HepG2UTP3
SERPINA4ENSG00000100665.7908.18860469.342900.952208.650406.72920HepG2XPO5
SERPINA4ENSG00000100665.7639.71020919.43020-0.523302.887101.59850HepG2XRCC5
SERPINA4ENSG00000100665.71878.62460657.100901.5154029.5714027.35650HepG2XRN2
SERPINA4ENSG00000100665.71140.43040957.576500.252002.576001.92410HepG2ZC3H8
SERPINA4ENSG00000100665.72130.031501557.714700.4513010.886309.97840HepG2ZNF622
SERPINA4ENSG00000100665.71361.20970934.144300.543103.739002.21810HepG2ZRANB2
SERPINA4ENSG00000100665.70.000007.63750-99999.999992.159901.44030K562MTPAP
SERPINA4ENSG00000100665.70.000008.48490-99999.999992.543501.82460K562NSUN2
SERPINA4ENSG00000100665.70.000008.37400-99999.999992.560301.77400K562SF3A3
SERPINA4ENSG00000100665.70.000008.57950-99999.999992.580901.67140K562SRPK2
SERPINA4ENSG00000100665.70.390308.99680-4.526702.227501.57850K562UPF1
SERPINA4ENSG00000100665.70.000007.69820-99999.999992.295201.49730K562WDR3
SERPINA4ENSG00000100665.70.000008.00610-99999.999992.499401.69320K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SERPINA4 is not available on ENCORE database.





2 RBPs can affect the splicing of SERPINA4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESERPINA4ENSG00000100665.7chr14+950279359502814695027427950278319502980295030468-0.051000.004140.07674excludedHepG2SRSF1
SESERPINA4ENSG00000100665.7chr14+950279359502799195027427950278319502980295030468-0.073000.000160.03969excludedHepG2DDX55

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SERPINA4 is not avaliable on ENCORE database.