PLTP

General Information

Gene Name       : PLTP
Gene ID             : ENSG00000100979.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PLTP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PLTPENSG00000100979.141.664.162.91ENCSR000AEF
HepG2PLTPENSG00000100979.1429.0415.3122.18ENCSR985KAT
K562PLTPENSG00000100979.1419.1217.3618.24ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PLTP is not avaliable on ENCORE database.



Proteins bound to RNA
  • PLTP RNA is bound by 4 proteins.  







eCLIP assay for PLTP is not avaliable on ENCORE database.





4 proteins are bound to PLTP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr204452745944527504-3'-UTR,intron-Distal4.7138711.56505HepG2PCBP2
chr204452745344527581-3'-UTR,intron-Distal3.436025.55036HepG2LARP4
chr204452750444527549-3'-UTR,intron-Distal5.2988312.47085HepG2PCBP2
chr204453117544531219-CDS,intron-Distal4.850685.87535K562SND1
chr204453108744531137-CDS,intron-Distal4.581105.29565HepG2SND1
chr204453345244533498-CDS,intron-Distal,intron-Proximal5.371713.48040HepG2SND1
chr204453370144533752-CDS,intron-Distal5.728456.43734HepG2SND1
chr204453108644531142-CDS,intron-Distal3.028754.36317K562SND1
chr204453115244531225-CDS,intron-Distal6.306097.63354HepG2SND1
chr204453358244533632-CDS,intron-Distal,intron-Proximal5.039376.07295HepG2SND1
chr204453823644538262-CDS,intron-Distal3.935973.30795HepG2SND1
chr204453979644539847-CDS,intron-Distal3.842143.19539K562YBX3
chr204453090844530955-CDS,intron-Distal3.987804.50521HepG2SND1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PLTP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PLTP is not available on ENCORE database.

  • 124 RBPs can affect the levels of PLTP.  








The Knockdown/knockout RNA-Seq assay for PLTP is not available on ENCORE database.





124 RBPs can affect the gene expression of PLTP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PLTPENSG00000100979.10278.40740432.26960-0.634706.073905.24330HepG2ACO1
PLTPENSG00000100979.10568.11310756.62920-0.413402.199301.71860HepG2AKAP1
PLTPENSG00000100979.10675.90700345.614200.967609.417407.62560HepG2AKAP8
PLTPENSG00000100979.10717.23580434.255100.7238010.250208.88790HepG2AKAP8L
PLTPENSG00000100979.10828.54430626.015600.404302.507101.75580HepG2ASCC1
PLTPENSG00000100979.10493.50340644.32360-0.384703.356302.61290HepG2AUH
PLTPENSG00000100979.10234.30850353.72600-0.594203.273802.29650HepG2BCLAF1
PLTPENSG00000100979.10558.80430367.785600.603404.643403.89180HepG2BOP1
PLTPENSG00000100979.10502.93400322.863900.639303.691002.81860HepG2CALR
PLTPENSG00000100979.10310.35910432.12110-0.477503.894503.13120HepG2CKAP4
PLTPENSG00000100979.101109.59480337.646901.7163037.0699034.95360HepG2CPSF6
PLTPENSG00000100979.10654.14250251.425201.3794019.4224017.07410HepG2CSTF2
PLTPENSG00000100979.10545.61700266.454501.0339011.6320010.35240HepG2DDX21
PLTPENSG00000100979.10214.31970374.50970-0.805204.709503.08860HepG2DDX27
PLTPENSG00000100979.10141.08980303.18090-1.103608.361706.15500HepG2DDX28
PLTPENSG00000100979.10339.84760724.72580-1.0925012.4179011.18260HepG2DDX3X
PLTPENSG00000100979.10893.94770622.713800.521503.535802.84530HepG2DDX6
PLTPENSG00000100979.10473.08420306.484600.626203.220202.16590HepG2DHX30
PLTPENSG00000100979.10871.60570317.740501.4557022.9898021.18090HepG2DNAJC21
PLTPENSG00000100979.10519.63660348.390900.576703.470802.44560HepG2EEF2
PLTPENSG00000100979.10291.05760598.47180-1.0400010.339109.23810HepG2EIF2S1
PLTPENSG00000100979.10345.87000251.819500.457702.568601.52890HepG2EIF3G
PLTPENSG00000100979.10239.26790392.92880-0.715604.528702.20690HepG2EIF3H
PLTPENSG00000100979.10432.96440644.01940-0.572903.085202.36190HepG2EIF4B
PLTPENSG00000100979.10696.48250507.538600.456504.536403.50780HepG2EIF4G1
PLTPENSG00000100979.10449.21160739.81000-0.7198010.701209.64470HepG2ETF1
PLTPENSG00000100979.10729.99720481.294400.600904.633802.49560HepG2FMR1
PLTPENSG00000100979.10318.15100527.51640-0.729506.563905.38220HepG2FUBP3
PLTPENSG00000100979.10440.71490251.774700.807605.986604.66560HepG2GEMIN5
PLTPENSG00000100979.10438.54450309.120100.504502.931201.88180HepG2GNB2L1
PLTPENSG00000100979.101625.35410382.748202.0862049.4884047.19670HepG2GPKOW
PLTPENSG00000100979.10323.66700627.12430-0.954209.920708.66700HepG2HNRNPK
PLTPENSG00000100979.10921.88720365.263701.3356020.7320019.26090HepG2HNRNPLL
PLTPENSG00000100979.10483.73170362.167200.417502.165701.32440HepG2HNRNPM
PLTPENSG00000100979.10845.96150376.160001.169103.829902.38070HepG2HSPD1
PLTPENSG00000100979.10807.71320466.033500.7933010.602809.27530HepG2IGF2BP1
PLTPENSG00000100979.10959.95240629.203300.609305.352604.44060HepG2IGF2BP2
PLTPENSG00000100979.10319.54650590.65460-0.886302.793601.80720HepG2IGF2BP3
PLTPENSG00000100979.10371.27000210.415700.819104.536602.82220HepG2ILF3
PLTPENSG00000100979.10321.57980205.733200.644303.266201.94740HepG2KHDRBS1
PLTPENSG00000100979.10565.79780395.114600.517905.587204.15300HepG2KIF1C
PLTPENSG00000100979.101325.30790550.193301.2682017.0111014.98720HepG2LARP4
PLTPENSG00000100979.10443.47340318.012300.479703.072501.79440HepG2LIN28B
PLTPENSG00000100979.101083.24960671.394100.690003.641802.92680HepG2MATR3
PLTPENSG00000100979.10647.52400372.523500.797505.176703.82400HepG2MTPAP
PLTPENSG00000100979.10519.04860687.17860-0.404802.256801.68220HepG2NCBP2
PLTPENSG00000100979.10366.44160510.01520-0.477002.772102.00710HepG2NOL12
PLTPENSG00000100979.10632.55280367.700800.782603.581302.32750HepG2NONO
PLTPENSG00000100979.10551.65490323.876800.768206.403605.29420HepG2NSUN2
PLTPENSG00000100979.10256.31230660.17960-1.3650027.7270026.14270HepG2PCBP1
PLTPENSG00000100979.10163.09010287.53850-0.818102.474401.49130HepG2PCBP2
PLTPENSG00000100979.10442.52630330.266400.422003.018302.21530HepG2PRPF4
PLTPENSG00000100979.10264.83360671.75510-1.3428027.3342025.96040HepG2PTBP1
PLTPENSG00000100979.10928.07420486.893200.9305014.3164013.10270HepG2PUF60
PLTPENSG00000100979.10652.87730516.904400.336802.853502.25360HepG2PUM1
PLTPENSG00000100979.101352.85440516.498401.3891038.2885036.04410HepG2PUM2
PLTPENSG00000100979.10205.12550440.28660-1.1019015.1735013.93460HepG2PUS1
PLTPENSG00000100979.10415.28330727.53220-0.8089010.425409.32290HepG2QKI
PLTPENSG00000100979.1055.31140277.34840-2.3261010.463509.15920HepG2RAVER1
PLTPENSG00000100979.10331.42970660.28040-0.9944012.8910011.49620HepG2RBM25
PLTPENSG00000100979.10446.91590696.28520-0.639707.720106.76680HepG2RECQL
PLTPENSG00000100979.101638.58460509.860901.684207.649006.59970HepG2RPLP0
PLTPENSG00000100979.102504.88120275.193403.18610161.08430157.76040HepG2RPS19
PLTPENSG00000100979.10760.03820336.724801.1744015.9958014.19430HepG2RPS2
PLTPENSG00000100979.10574.90940216.799701.4069014.3320012.56980HepG2RPS3A
PLTPENSG00000100979.10517.16560343.698600.589404.219102.87700HepG2RPS5
PLTPENSG00000100979.10113.64800305.35680-1.4259011.243009.82570HepG2RRP9
PLTPENSG00000100979.10654.95560466.049900.490802.545501.89900HepG2SF3A3
PLTPENSG00000100979.10129.45660361.53840-1.4817014.5500013.06570HepG2SF3B1
PLTPENSG00000100979.10354.95720699.38780-0.9784015.7189014.48630HepG2SF3B4
PLTPENSG00000100979.10569.58190466.948600.286502.377401.72040HepG2SLBP
PLTPENSG00000100979.10576.41930402.275000.518802.336701.62110HepG2SNRNP70
PLTPENSG00000100979.10113.33950698.37270-2.6233076.2143074.50940HepG2SRFBP1
PLTPENSG00000100979.10866.18230480.790900.8492016.4128015.06650HepG2SRSF5
PLTPENSG00000100979.10642.46850464.979700.466404.373703.53000HepG2SRSF7
PLTPENSG00000100979.10433.13010593.89880-0.455404.340003.67790HepG2SRSF9
PLTPENSG00000100979.10862.78090546.744800.658008.797107.79320HepG2SUCLG1
PLTPENSG00000100979.101780.40740398.476602.1595048.7897046.65230HepG2SUPV3L1
PLTPENSG00000100979.10616.06150356.021400.791007.440506.32820HepG2TARDBP
PLTPENSG00000100979.10409.79340602.92180-0.557105.070103.94960HepG2TIA1
PLTPENSG00000100979.103625.93620344.322003.39640242.43980239.14110HepG2TIAL1
PLTPENSG00000100979.10886.19740475.748800.8973012.2476010.21660HepG2TUFM
PLTPENSG00000100979.10258.74730449.08340-0.795403.526502.82220HepG2U2AF1
PLTPENSG00000100979.10314.42130503.62170-0.679602.377501.60640HepG2UBE2L3
PLTPENSG00000100979.10921.72380413.315401.1570013.3497012.03100HepG2UPF1
PLTPENSG00000100979.10679.04620424.827400.676508.510406.78870HepG2UTP18
PLTPENSG00000100979.10157.10260272.96200-0.797002.517001.32130HepG2XRCC5
PLTPENSG00000100979.10582.81300305.139300.933507.141505.50820HepG2XRCC6
PLTPENSG00000100979.10419.60910325.944600.364302.339301.71480HepG2ZC3H8
PLTPENSG00000100979.10741.24710454.567200.7054011.5894010.66010HepG2ZNF622
PLTPENSG00000100979.10214.46540327.35640-0.610103.440902.10890K562AARS
PLTPENSG00000100979.10194.82720429.93700-1.1419010.507909.47430K562AQR
PLTPENSG00000100979.10605.59270436.399500.472603.989502.64960K562CPEB4
PLTPENSG00000100979.10385.76730271.723200.505503.113502.28010K562CPSF6
PLTPENSG00000100979.10336.45520451.64850-0.424803.121902.43550K562DDX47
PLTPENSG00000100979.10510.01400388.528200.392402.727601.43460K562DDX6
PLTPENSG00000100979.10157.48670291.56940-0.888605.136003.36370K562EEF2
PLTPENSG00000100979.10165.45080281.66560-0.767604.661803.46170K562EFTUD2
PLTPENSG00000100979.10291.24490420.89430-0.531204.319502.78130K562EIF2S1
PLTPENSG00000100979.10564.39970324.132000.800003.726702.91420K562EIF2S2
PLTPENSG00000100979.10192.54230301.49790-0.647003.422502.26190K562EIF3D
PLTPENSG00000100979.10280.53400400.35800-0.513102.663101.85860K562EIF4A3
PLTPENSG00000100979.10387.60590624.03730-0.687008.320706.71340K562EIF4G2
PLTPENSG00000100979.10211.49000416.35270-0.9772010.689009.58490K562FXR1
PLTPENSG00000100979.1047.15030153.10190-1.699209.126907.69090K562G3BP2
PLTPENSG00000100979.10253.66960395.66310-0.641305.100003.57780K562GLRX3
PLTPENSG00000100979.10356.95750519.73840-0.542004.268202.93610K562HNRNPA1
PLTPENSG00000100979.10245.75320357.96620-0.542603.139002.50870K562HNRNPC
PLTPENSG00000100979.10219.85530319.76450-0.540502.898201.72940K562HNRNPF
PLTPENSG00000100979.10537.36910408.145000.396702.533901.52710K562HNRNPL
PLTPENSG00000100979.10344.83690575.59720-0.739108.406106.86260K562HNRNPU
PLTPENSG00000100979.10767.18350324.460901.2414017.8391015.94500K562HSPD1
PLTPENSG00000100979.10612.31880815.00810-0.412503.395702.37110K562MBNL1
PLTPENSG00000100979.10347.46870253.239100.456302.387501.57680K562METAP2
PLTPENSG00000100979.10269.78430415.98940-0.624705.195104.11050K562MTPAP
PLTPENSG00000100979.10439.77730682.64780-0.634405.978003.74320K562NOL12
PLTPENSG00000100979.10455.67370277.729500.714204.777602.94030K562NONO
PLTPENSG00000100979.10567.96190462.194300.297202.015201.36670K562NSUN2
PLTPENSG00000100979.10501.11710317.539800.658102.271601.39210K562PABPN1
PLTPENSG00000100979.10119.32160248.24760-1.056904.057602.86680K562PCBP2
PLTPENSG00000100979.10233.33170413.28130-0.824705.837404.62350K562PCBP3
PLTPENSG00000100979.10192.92900316.98800-0.716404.211603.22050K562POLR2G
PLTPENSG00000100979.10391.06780271.725400.525203.169102.28240K562PPIG
PLTPENSG00000100979.10235.95580410.76730-0.799803.666201.49910K562PRPF6
PLTPENSG00000100979.1093.68810274.09510-1.5487012.3912010.79540K562PRPF8
PLTPENSG00000100979.10477.21010320.982100.572003.529902.49000K562PSIP1
PLTPENSG00000100979.10431.47030680.85240-0.658106.033104.83060K562PUF60
PLTPENSG00000100979.10918.74310709.560500.372603.027802.02620K562PUM2
PLTPENSG00000100979.10454.25990679.87510-0.581803.933103.30200K562PUS1
PLTPENSG00000100979.1052.98670146.06640-1.462905.145403.12070K562RAVER1
PLTPENSG00000100979.10401.55370292.988900.454602.553901.60570K562RCC2
PLTPENSG00000100979.10189.37690279.13820-0.559702.564901.77980K562RPS19
PLTPENSG00000100979.10190.30240292.03800-0.617903.320101.71850K562SDAD1
PLTPENSG00000100979.10134.44000234.49610-0.802603.447301.68340K562SERBP1
PLTPENSG00000100979.10613.17670353.894300.792903.028901.63700K562SFPQ
PLTPENSG00000100979.10287.94450467.26340-0.698407.216105.78020K562SRPK2
PLTPENSG00000100979.10403.27890251.144900.683204.037102.72710K562SRSF5
PLTPENSG00000100979.10236.82840317.96500-0.425002.150601.42610K562SYNCRIP
PLTPENSG00000100979.1064.65980148.34750-1.198005.438003.80100K562U2AF1
PLTPENSG00000100979.1051.35940153.22970-1.577009.807508.29440K562U2AF2
PLTPENSG00000100979.101103.59200767.760600.523404.289702.54110K562UBE2L3
PLTPENSG00000100979.10842.93120490.075000.7823013.2498011.81890K562UPF1
PLTPENSG00000100979.10267.56780436.07220-0.704707.342406.02670K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PLTP is not available on ENCORE database.





6 RBPs can affect the splicing of PLTP :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPLTPENSG00000100979.10chr20-445381544453831044536479445365434453858044538801-0.231000.001180.02402excludedK562SRSF1
SEPLTPENSG00000100979.10chr20-445381544453831044536479445365434453858044538801-0.150000.007330.06352excludedK562AQR
SEPLTPENSG00000100979.10chr20-445385804453870944536479445365434453979044539890-0.337000.004910.06146excludedK562PUS1
SEPLTPENSG00000100979.10chr20-4453815444538310445364794453654344538580445387090.055000.001180.07573includedHepG2TIAL1
SEPLTPENSG00000100979.10chr20-4453815444538310445364794453654344538580445387090.149000.000070.02409includedHepG2XRCC6
A3SSPLTPENSG00000100979.10chr20-445385804453880144538580445387094453950944539576-0.520000.002030.08367shorterK562PUS1
RIPLTPENSG00000100979.10chr20-445363304453653944536330445363944453647944536539-0.055000.011710.09740excludedHepG2HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PLTP is not avaliable on ENCORE database.