PRKAG1

General Information

Gene Name       : PRKAG1
Gene ID             : ENSG00000181929.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PRKAG1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PRKAG1ENSG00000181929.1264.6755.0659.87ENCSR000AEF
HepG2PRKAG1ENSG00000181929.1217.4924.3320.91ENCSR985KAT
K562PRKAG1ENSG00000181929.1269.1872.8371.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PRKAG1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PRKAG1 RNA is bound by 8 proteins.  







eCLIP assay for PRKAG1 is not avaliable on ENCORE database.





8 proteins are bound to PRKAG1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr124939753949397628-3'-UTR,CDS,intron-Distal,intron-Proximal3.9899611.79269K562YBX3
chr124939634049396406-3'-UTR,intron-Distal,intron-Proximal3.589925.78947K562YBX3
chr124939610949396192-3'-UTR,intron-Distal3.567283.38753K562FAM120A
chr124939621749396277-3'-UTR,intron-Distal3.4829710.23390K562YBX3
chr124939609449396198-3'-UTR,intron-Distal,intron-Proximal6.2008815.67242K562UPF1
chr124939924049399310-3'-UTR,CDS,intron-Distal,intron-Proximal4.186953.47885K562LIN28B
chr124939946149399536-3'-UTR,CDS,intron-Distal,intron-Proximal3.760623.07287K562TIA1
chr124939638549396514-3'-UTR,intron-Distal,intron-Proximal3.393324.79181K562FAM120A
chr124941280349412886-3'-UTR,5'-UTR,intron-Distal5.4639029.34071K562PUM2
chr124941280549412872-3'-UTR,5'-UTR,intron-Distal3.598943.16048K562DDX6
chr124939841949398562-intron-Distal,intron-Proximal4.882736.53047K562AGGF1
chr124941299149413015-3'-UTR,intron-Distal,intron-Proximal4.693769.83426K562PUM2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PRKAG1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PRKAG1 is not available on ENCORE database.

  • 76 RBPs can affect the levels of PRKAG1.  








The Knockdown/knockout RNA-Seq assay for PRKAG1 is not available on ENCORE database.





76 RBPs can affect the gene expression of PRKAG1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PRKAG1ENSG00000181929.7824.32750498.753900.724806.064004.72870HepG2ABCF1
PRKAG1ENSG00000181929.7581.88650331.523400.8115011.4025010.34620HepG2ACO1
PRKAG1ENSG00000181929.71030.52600643.044100.680305.549604.82710HepG2AKAP1
PRKAG1ENSG00000181929.7714.74750532.082700.425702.649701.88110HepG2ASCC1
PRKAG1ENSG00000181929.7615.39420450.144800.451003.068401.58840HepG2ATP5C1
PRKAG1ENSG00000181929.7522.30000388.831900.425602.565601.98660HepG2BOP1
PRKAG1ENSG00000181929.7636.00760438.780800.535404.354403.41140HepG2CALR
PRKAG1ENSG00000181929.7893.69380505.509500.821908.840407.52360HepG2CIRBP
PRKAG1ENSG00000181929.7479.52490331.441500.532805.023404.17620HepG2CKAP4
PRKAG1ENSG00000181929.7333.82430468.93970-0.490303.773703.04550HepG2CELF1
PRKAG1ENSG00000181929.7464.17250350.852700.403702.609201.48550HepG2DDX1
PRKAG1ENSG00000181929.7670.69120343.030300.9672011.4899010.22010HepG2DDX21
PRKAG1ENSG00000181929.7478.87970335.560700.513003.472202.44250HepG2DDX24
PRKAG1ENSG00000181929.7795.03760616.025600.367902.122001.56700HepG2DDX3X
PRKAG1ENSG00000181929.7534.88830360.162100.570503.630302.75830HepG2DDX55
PRKAG1ENSG00000181929.7268.90710405.36880-0.592102.246701.36900HepG2DDX59
PRKAG1ENSG00000181929.7564.72290399.177500.500403.402502.29050HepG2DDX5
PRKAG1ENSG00000181929.7558.77530317.175500.816909.907108.78690HepG2DKC1
PRKAG1ENSG00000181929.7453.10240341.032300.409803.305402.60420HepG2DNAJC2
PRKAG1ENSG00000181929.7515.66470332.442300.633204.157403.05060HepG2EEF2
PRKAG1ENSG00000181929.7387.39610508.71510-0.393001.886501.38610HepG2EIF2S1
PRKAG1ENSG00000181929.7879.39990562.233000.645305.178004.30540HepG2EIF4A3
PRKAG1ENSG00000181929.7377.00790547.33070-0.537802.583301.91690HepG2EIF4B
PRKAG1ENSG00000181929.7495.34460705.81480-0.510905.687704.87780HepG2ETF1
PRKAG1ENSG00000181929.7515.70630323.948800.670705.885104.66780HepG2EWSR1
PRKAG1ENSG00000181929.7470.21080326.832200.524703.552102.28050HepG2FASTKD2
PRKAG1ENSG00000181929.7720.00500503.631300.515503.202702.38050HepG2FIP1L1
PRKAG1ENSG00000181929.7493.03810347.317000.505303.136002.45430HepG2HNRNPA1
PRKAG1ENSG00000181929.7730.73900386.342400.9194010.574809.29470HepG2HNRNPC
PRKAG1ENSG00000181929.7504.11560640.29550-0.345002.871102.14210HepG2HNRNPF
PRKAG1ENSG00000181929.7507.65220386.185800.394402.031301.48300HepG2HNRNPLL
PRKAG1ENSG00000181929.7499.35870347.510500.522903.799102.70380HepG2HNRNPM
PRKAG1ENSG00000181929.7550.60060383.786900.520605.086604.28450HepG2HNRNPU
PRKAG1ENSG00000181929.7494.22010392.022800.334102.520201.81670HepG2ILF2
PRKAG1ENSG00000181929.7854.00460567.337000.589904.733403.88290HepG2MAGOH
PRKAG1ENSG00000181929.7410.77720570.53340-0.474002.503401.90060HepG2MATR3
PRKAG1ENSG00000181929.7430.41520282.448000.607602.396301.41440HepG2METAP2
PRKAG1ENSG00000181929.7721.62930407.648400.823809.446408.03470HepG2MSI2
PRKAG1ENSG00000181929.7745.00100379.862700.9717017.1237015.34590HepG2PARN
PRKAG1ENSG00000181929.7678.53510559.919900.277102.104701.56370HepG2PCBP1
PRKAG1ENSG00000181929.7319.91430223.177100.519403.024901.73620HepG2PKM
PRKAG1ENSG00000181929.7367.38040506.28830-0.462703.222602.49830HepG2PUM2
PRKAG1ENSG00000181929.7469.20830337.676600.474503.983803.26980HepG2PUS1
PRKAG1ENSG00000181929.7756.56590352.423001.102107.773706.62710HepG2RAVER1
PRKAG1ENSG00000181929.7759.98890589.926200.365303.111202.57010HepG2RBM22
PRKAG1ENSG00000181929.7432.39010560.00100-0.373102.229601.61850HepG2RBM25
PRKAG1ENSG00000181929.7508.52970634.07330-0.318302.077601.59460HepG2NELFE
PRKAG1ENSG00000181929.7903.92230689.784400.390002.724902.04520HepG2RPLP0
PRKAG1ENSG00000181929.7493.83930346.186800.512402.326701.45980HepG2RPS10
PRKAG1ENSG00000181929.7375.85290262.595500.517203.075602.43220HepG2RPS19
PRKAG1ENSG00000181929.7462.71550263.558900.811906.494805.07120HepG2SERBP1
PRKAG1ENSG00000181929.7619.63410424.927200.544103.062602.35310HepG2SF3A3
PRKAG1ENSG00000181929.7571.16950359.337900.668504.216703.01540HepG2SMNDC1
PRKAG1ENSG00000181929.7922.36650619.141900.575007.826307.12500HepG2SRSF1
PRKAG1ENSG00000181929.7368.67520503.72290-0.450303.633503.01990HepG2SRSF9
PRKAG1ENSG00000181929.7717.89910535.939700.421604.248103.50690HepG2SUCLG1
PRKAG1ENSG00000181929.7790.60770522.245400.598103.827502.25040HepG2SUGP2
PRKAG1ENSG00000181929.7675.16660358.569700.912908.450507.37310HepG2SUPV3L1
PRKAG1ENSG00000181929.7643.72950376.371600.774207.400506.29060HepG2TARDBP
PRKAG1ENSG00000181929.7505.94660376.258300.427203.487402.87030HepG2TRIM56
PRKAG1ENSG00000181929.7322.62200214.447200.589102.922101.31280HepG2TROVE2
PRKAG1ENSG00000181929.7469.60010376.844800.317402.011301.39910HepG2UPF1
PRKAG1ENSG00000181929.7941.83170363.829801.3721035.6811033.89610HepG2UTP3
PRKAG1ENSG00000181929.7656.27620387.572100.759705.174403.75150HepG2XRCC6
PRKAG1ENSG00000181929.7492.16060352.971500.479502.949302.20060HepG2XRN2
PRKAG1ENSG00000181929.7743.21720463.342000.681607.795406.76170HepG2ZC3H8
PRKAG1ENSG00000181929.7713.61740414.458000.7838013.4242012.44620HepG2ZNF622
PRKAG1ENSG00000181929.72476.859402007.437400.303104.729404.02150K562AGGF1
PRKAG1ENSG00000181929.72530.076002191.741500.207002.137001.34140K562ATP5C1
PRKAG1ENSG00000181929.72150.227302726.56470-0.342603.854402.69280K562CELF1
PRKAG1ENSG00000181929.72412.128101684.231300.5181011.3209010.10010K562DDX47
PRKAG1ENSG00000181929.71336.10140956.562000.482003.274501.87150K562EEF2
PRKAG1ENSG00000181929.71930.386701520.208600.344502.925502.05250K562FIP1L1
PRKAG1ENSG00000181929.72062.488001250.382000.721908.381306.62000K562HNRNPM
PRKAG1ENSG00000181929.73287.098402061.095800.6733010.085408.59350K562HSPD1
PRKAG1ENSG00000181929.72607.175402122.004300.297002.674601.62120K562MAK16
PRKAG1ENSG00000181929.7957.721601189.56780-0.312802.296701.40980K562PCBP2
PRKAG1ENSG00000181929.72214.885201725.721200.359903.065302.19550K562PPIG
PRKAG1ENSG00000181929.72728.885002071.427600.397603.972803.33920K562PUS1
PRKAG1ENSG00000181929.71788.067101228.003900.542003.056601.55910K562RAVER1
PRKAG1ENSG00000181929.7961.007701310.70690-0.447703.851802.53570K562NELFE
PRKAG1ENSG00000181929.71182.754401527.56690-0.369102.700001.70900K562RPS3
PRKAG1ENSG00000181929.71667.507901273.439000.388904.040003.19180K562SRSF1
PRKAG1ENSG00000181929.71268.262601030.475700.299402.772901.49610K562SSB
PRKAG1ENSG00000181929.71529.844701183.717000.370003.918102.94050K562SYNCRIP
PRKAG1ENSG00000181929.71888.552401541.260900.293103.911903.06950K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PRKAG1 is not available on ENCORE database.





16 RBPs can affect the splicing of PRKAG1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPRKAG1ENSG00000181929.7chr12-493975394939770549396926493970734939828949398416-0.063000.002200.03925excludedK562SF3B4
SEPRKAG1ENSG00000181929.7chr12-493982894939841649397539493977054939874649398801-0.071000.002470.04318excludedHepG2U2AF1
SEPRKAG1ENSG00000181929.7chr12-493995254939963549399244493993264940684449406893-0.096000.000040.01680excludedK562PCBP1
SEPRKAG1ENSG00000181929.7chr12-4939952549399635493992444939932649406844494068930.117000.000770.07963includedK562FMR1
SEPRKAG1ENSG00000181929.7chr12-494022084940238249399525493996354940684449406893-0.192000.005020.05328excludedHepG2U2AF2
SEPRKAG1ENSG00000181929.7chr12-493973144939737849396926493970734939753949397764-0.054000.010770.08609excludedK562AQR
SEPRKAG1ENSG00000181929.7chr12-4939952549399635493992444939932649406844494068930.077000.001190.04550includedK562FXR1
SEPRKAG1ENSG00000181929.7chr12-4939952549399635493992444939932649406844494068930.131000.000170.04504includedK562GPKOW
SEPRKAG1ENSG00000181929.7chr12-493995254939963549399244493993264940684449406893-0.308000.000320.02624excludedHepG2FTO
SEPRKAG1ENSG00000181929.7chr12-493982894939841649397539493977054939874649398801-0.073000.000240.02196excludedHepG2FTO
SEPRKAG1ENSG00000181929.7chr12-493973404939737849396926493970734939753949397705-0.069000.000880.02020excludedK562U2AF1
SEPRKAG1ENSG00000181929.7chr12-493995254939963549399244493993264940684449406893-0.126000.000030.00387excludedK562HNRNPL
SEPRKAG1ENSG00000181929.7chr12-493975394939770549396926493970734939828949398416-0.071000.000840.01726excludedK562U2AF2
SEPRKAG1ENSG00000181929.7chr12-493995254939963549399244493993264940684449406893-0.079000.000510.02238excludedK562TARDBP
SEPRKAG1ENSG00000181929.7chr12-4939952549399635493992444939932649406844494068930.057000.001620.05438includedK562HNRNPU
SEPRKAG1ENSG00000181929.7chr12-4940220849402382493995254939963549406844494068930.067000.000010.00024includedK562HNRNPC
SEPRKAG1ENSG00000181929.7chr12-493995254939963549399244493993264940684449406893-0.275000.000000.00000excludedK562HNRNPC
A3SSPRKAG1ENSG00000181929.7chr12-4939924449399375493992444939932649399525493996350.298000.000370.01159longerHepG2U2AF2
A3SSPRKAG1ENSG00000181929.7chr12-4939924449399375493992444939932649399525493996350.134000.000000.00000longerK562AQR
A3SSPRKAG1ENSG00000181929.7chr12-4939828949398457493982894939841649398746493988010.051000.000000.00002longerK562AQR
A3SSPRKAG1ENSG00000181929.7chr12-4939692649397094493969264939707349397340493973780.101000.000000.00000longerK562AQR
A3SSPRKAG1ENSG00000181929.7chr12-4939924449399375493992444939932649399525493996350.128000.000000.00015longerK562U2AF1
A3SSPRKAG1ENSG00000181929.7chr12-4939952549399678493995254939963549406844494068930.066000.000000.00000longerK562U2AF1
RIPRKAG1ENSG00000181929.7chr12-4939828949398801493982894939841649398746493988010.082000.001960.03835includedHepG2PCBP2
RIPRKAG1ENSG00000181929.7chr12-4939828949398801493982894939841649398746493988010.060000.000000.00000includedK562AQR
RIPRKAG1ENSG00000181929.7chr12-4939908849399326493990884939914749399244493993260.148000.000000.00000includedK562AQR
MXEPRKAG1ENSG00000181929.7chr12-49397340493973784939753949397705493969264939707349398746493988010.262000.001370.027201includedHepG2U2AF1
MXEPRKAG1ENSG00000181929.7chr12-4939753949397705493982894939841649396926493970734939874649398801-0.077000.003560.056562includedHepG2U2AF1
MXEPRKAG1ENSG00000181929.7chr12-49397539493977054939828949398416493973404939737849398746493988010.108000.006750.078371includedK562U2AF1
MXEPRKAG1ENSG00000181929.7chr12-49397340493973784939828949398416493969264939707349398746493988010.113000.008140.089441includedK562U2AF1
MXEPRKAG1ENSG00000181929.7chr12-49397340493973784939753949397705493969264939707349398746493988010.074000.000040.001521includedK562U2AF1
MXEPRKAG1ENSG00000181929.7chr12-4939753949397705493982894939841649396926493970734939874649398801-0.051000.001630.028812includedK562U2AF1
MXEPRKAG1ENSG00000181929.7chr12-49397539493977054939828949398416493973404939737849398746493988010.111000.004890.054421includedK562U2AF2
MXEPRKAG1ENSG00000181929.7chr12-49397539493977054939828949398416493973404939737849398746493988010.105000.001870.099301includedK562RBFOX2
MXEPRKAG1ENSG00000181929.7chr12-49397539493977054939828949398416493973404939737849398746493988010.137000.000000.000191includedK562DHX30

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PRKAG1 is not avaliable on ENCORE database.