NEDD9

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NEDD9	ENSG00000111859.16	8.98	9.54	9.26	ENCSR000AEF
HepG2	NEDD9	ENSG00000111859.16	67.58	65.50	66.54	ENCSR985KAT
K562	NEDD9	ENSG00000111859.16	0.05	0.01	0.03	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NEDD9 is not avaliable on ENCORE database.

Proteins bound to RNA

NEDD9 RNA is bound by 37 proteins.

eCLIP assay for NEDD9 is not avaliable on ENCORE database.

37 proteins are bound to NEDD9 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	11199077	11199169	-	3'-UTR,intron-Distal	3.26850	5.17760	HepG2	QKI
chr6	11190937	11191040	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.27100	10.69327	HepG2	RPS3
chr6	11185223	11185272	-	3'-UTR,intron-Distal	3.70620	4.73068	HepG2	TIAL1
chr6	11188511	11188541	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.95326	11.13847	HepG2	G3BP1
chr6	11191197	11191275	-	3'-UTR,CDS,intron-Distal	3.40801	5.65591	HepG2	ZNF800
chr6	11190301	11190426	-	3'-UTR,CDS,intron-Distal	4.68131	7.98291	HepG2	UCHL5
chr6	11190529	11190577	-	3'-UTR,CDS,intron-Distal	3.79877	12.37809	HepG2	G3BP1
chr6	11191360	11191383	-	3'-UTR,CDS,intron-Distal	4.19740	8.03104	HepG2	G3BP1
chr6	11190822	11190862	-	3'-UTR,CDS,intron-Distal	3.30841	3.05161	HepG2	PPIG
chr6	11190296	11190369	-	3'-UTR,CDS,intron-Distal	3.96757	12.89946	HepG2	GRWD1
chr6	11185664	11185772	-	3'-UTR,CDS,intron-Distal	3.34090	10.05467	HepG2	RBM15
chr6	11190806	11190867	-	3'-UTR,CDS,intron-Distal	3.90266	7.18138	HepG2	RBM15
chr6	11185363	11185459	-	3'-UTR,CDS,intron-Distal	3.36541	10.26546	HepG2	G3BP1
chr6	11190886	11190981	-	3'-UTR,CDS,intron-Distal	3.45314	16.56019	HepG2	G3BP1
chr6	11190329	11190362	-	3'-UTR,CDS,intron-Distal	3.21196	4.18161	HepG2	RBM15
chr6	11185090	11185144	-	3'-UTR,intron-Distal	3.33229	7.49625	HepG2	DDX55
chr6	11185804	11185901	-	3'-UTR,CDS,intron-Distal	3.19344	8.47067	HepG2	ZNF800
chr6	11184166	11184256	-	3'-UTR,intron-Distal	4.18832	7.09011	HepG2	IGF2BP1
chr6	11190592	11190701	-	3'-UTR,CDS,intron-Distal	3.18955	5.12662	HepG2	RBM15
chr6	11193770	11193844	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.79784	6.65114	HepG2	PRPF8
chr6	11184991	11185046	-	3'-UTR,intron-Distal,intron-Proximal	4.22858	3.47315	HepG2	CSTF2
chr6	11190144	11190201	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.07744	6.78476	HepG2	AQR
chr6	11193810	11193871	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.96902	7.55042	HepG2	PPIG
chr6	11188486	11188542	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.02166	11.16251	HepG2	BCLAF1
chr6	11185760	11185801	-	3'-UTR,CDS,intron-Distal	4.04515	7.10432	HepG2	G3BP1
chr6	11213929	11213980	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.23148	16.84570	HepG2	U2AF2
chr6	11192546	11192589	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.06960	6.58230	HepG2	AQR
chr6	11193858	11193955	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.04875	9.17937	HepG2	AQR
chr6	11185812	11185869	-	3'-UTR,CDS,intron-Distal	3.27245	8.46727	HepG2	AQR
chr6	11213502	11213574	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.35272	4.38898	HepG2	BUD13
chr6	11192643	11192703	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.02297	7.99242	HepG2	AQR
chr6	11213881	11213960	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.67151	5.81065	HepG2	SDAD1
chr6	11191386	11191431	-	3'-UTR,CDS,intron-Distal	3.79092	5.26203	HepG2	FXR2
chr6	11191387	11191523	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.09021	10.26591	HepG2	BUD13
chr6	11191379	11191472	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.93700	24.59710	HepG2	AQR
chr6	11188504	11188542	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.50349	6.39233	HepG2	FXR2
chr6	11191090	11191134	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.15217	6.01733	HepG2	RBM15
chr6	11191199	11191274	-	3'-UTR,CDS,intron-Distal	3.52323	7.78789	HepG2	FXR2
chr6	11188449	11188549	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.31964	16.07111	HepG2	AQR
chr6	11188339	11188479	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.91029	5.93840	HepG2	PRPF8
chr6	11213670	11213726	-	3'-UTR,CDS,intron-Distal	4.10973	5.55488	HepG2	RBM15
chr6	11188445	11188486	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.36255	13.12590	HepG2	BCLAF1
chr6	11184111	11184178	-	3'-UTR,intron-Distal	3.92208	3.45687	HepG2	IGF2BP3
chr6	11185055	11185146	-	3'-UTR,intron-Distal	3.94088	13.39709	HepG2	FUBP3
chr6	11185798	11185906	-	3'-UTR,CDS,intron-Distal	3.11355	26.21502	HepG2	BCLAF1
chr6	11190945	11191043	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.08581	7.08213	HepG2	FXR2
chr6	11190198	11190236	-	3'-UTR,CDS,intron-Distal	3.89039	6.05315	HepG2	FXR2
chr6	11213809	11213861	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.01200	3.55955	HepG2	SDAD1
chr6	11213935	11214040	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37127	3.30959	HepG2	AQR
chr6	11193889	11194015	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.47208	10.28301	HepG2	BUD13
chr6	11185869	11185887	-	3'-UTR,CDS,intron-Distal	3.56011	12.76536	HepG2	AQR
chr6	11198880	11198979	-	3'-UTR,intron-Distal	3.45736	5.04671	HepG2	SFPQ
chr6	11191270	11191317	-	3'-UTR,CDS,intron-Distal	3.20290	7.86141	HepG2	G3BP1
chr6	11185801	11185906	-	3'-UTR,CDS,intron-Distal	3.65474	23.17638	HepG2	G3BP1
chr6	11190586	11190644	-	3'-UTR,CDS,intron-Distal	3.41028	7.91353	HepG2	GRWD1
chr6	11185887	11185917	-	3'-UTR,CDS,intron-Distal	3.86583	16.84025	HepG2	AQR
chr6	11190543	11190586	-	3'-UTR,CDS,intron-Distal	3.15373	7.88565	HepG2	GRWD1
chr6	11188474	11188511	-	3'-UTR,CDS,intron-Distal	3.17754	10.05568	HepG2	G3BP1
chr6	11190935	11190962	-	3'-UTR,CDS,intron-Distal	3.49754	4.18161	HepG2	RBM15
chr6	11213726	11213789	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.84757	12.34423	HepG2	RBM15
chr6	11190748	11190779	-	3'-UTR,CDS,intron-Distal	3.32128	4.67014	HepG2	RBM15
chr6	11188450	11188474	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.32795	7.45446	HepG2	G3BP1
chr6	11213603	11213658	-	3'-UTR,CDS,intron-Distal	3.00167	5.27559	HepG2	RBM15
chr6	11190197	11190250	-	3'-UTR,CDS,intron-Distal	4.68000	15.04885	HepG2	G3BP1
chr6	11232673	11232770	-	5'-UTR,CDS,intron-Distal	3.23880	6.34676	HepG2	PRPF8
chr6	11227298	11227345	-	intron-Distal	5.50382	8.32953	HepG2	QKI
chr6	11194348	11194402	-	intron-Distal	3.63883	4.65924	HepG2	QKI
chr6	11207605	11207608	-	intron-Distal	3.99365	68.87644	HepG2	HNRNPL
chr6	11230581	11230649	-	intron-Distal	3.55356	7.26798	HepG2	TIAL1
chr6	11207478	11207509	-	intron-Distal	4.92446	25.43341	HepG2	HNRNPL
chr6	11188565	11188614	-	intron-Distal,intron-Proximal	3.55098	3.09957	HepG2	AQR
chr6	11207278	11207320	-	intron-Distal	4.66539	51.02028	HepG2	HNRNPL
chr6	11214634	11214705	-	intron-Distal	3.41256	5.91268	HepG2	KHSRP
chr6	11228389	11228419	-	intron-Distal	3.89345	23.06620	HepG2	PTBP1
chr6	11185917	11185938	-	intron-Distal	3.85155	8.59245	HepG2	AQR
chr6	11227374	11227439	-	intron-Distal	3.76480	7.55263	HepG2	QKI
chr6	11227345	11227374	-	intron-Distal	5.54251	11.50595	HepG2	QKI
chr6	11232700	11232736	-	intron-Distal	4.52153	3.93614	HepG2	AQR
chr6	11207487	11207526	-	intron-Distal	3.64036	6.59818	HepG2	AGGF1
chr6	11207343	11207385	-	intron-Distal	4.56461	55.39874	HepG2	HNRNPL
chr6	11210986	11211057	-	intron-Distal	3.48565	26.16803	HepG2	PTBP1
chr6	11207326	11207343	-	intron-Distal	4.03861	46.37980	HepG2	HNRNPL
chr6	11229959	11229990	-	intron-Distal	3.13235	5.74012	HepG2	U2AF1
chr6	11225447	11225500	-	intron-Distal	3.33633	3.97172	HepG2	QKI
chr6	11218057	11218114	-	intron-Distal	3.63979	3.30829	HepG2	CSTF2
chr6	11187709	11187809	-	intron-Distal	3.29403	9.22967	HepG2	PTBP1
chr6	11197668	11197740	-	intron-Distal	4.55477	13.43087	HepG2	QKI
chr6	11207593	11207598	-	intron-Distal	3.95259	70.76789	HepG2	HNRNPL
chr6	11204326	11204394	-	intron-Distal	3.23396	5.60502	HepG2	QKI
chr6	11206353	11206464	-	intron-Distal	3.08054	3.38311	HepG2	ILF3
chr6	11213427	11213490	-	intron-Distal,intron-Proximal	3.42354	3.07748	HepG2	U2AF1
chr6	11229934	11230004	-	intron-Distal	3.54278	19.88071	HepG2	U2AF2
chr6	11210924	11211039	-	intron-Distal	5.15871	35.21097	HepG2	PCBP2
chr6	11209843	11209915	-	intron-Distal	4.66740	26.21094	HepG2	QKI
chr6	11207545	11207566	-	intron-Distal	4.04767	50.02606	HepG2	HNRNPL
chr6	11213989	11214043	-	intron-Distal,intron-Proximal	6.16335	18.91683	HepG2	RBM5
chr6	11188392	11188449	-	intron-Distal,intron-Proximal	4.18455	11.57272	HepG2	AQR
chr6	11207486	11207529	-	intron-Distal	4.38190	3.01994	HepG2	GTF2F1
chr6	11213424	11213466	-	intron-Distal,intron-Proximal	3.47162	3.84494	HepG2	QKI
chr6	11213416	11213490	-	intron-Distal,intron-Proximal	4.27324	32.70263	HepG2	U2AF2
chr6	11207509	11207517	-	intron-Distal	4.48161	15.85418	HepG2	HNRNPL
chr6	11213433	11213489	-	intron-Distal,intron-Proximal	3.59244	5.15168	HepG2	EFTUD2
chr6	11204441	11204492	-	intron-Distal	3.65360	6.09178	HepG2	QKI
chr6	11207566	11207571	-	intron-Distal	4.15142	56.43831	HepG2	HNRNPL
chr6	11187929	11187967	-	intron-Distal	5.11972	5.75114	HepG2	PTBP1
chr6	11204908	11204956	-	intron-Distal	3.76092	3.43813	HepG2	HNRNPC
chr6	11228954	11229022	-	intron-Distal	3.97357	5.75967	HepG2	SFPQ
chr6	11209529	11209571	-	intron-Distal	3.55300	5.61197	HepG2	HNRNPL
chr6	11219991	11220085	-	intron-Distal	4.98084	12.32881	HepG2	CSTF2
chr6	11207598	11207605	-	intron-Distal	4.18541	85.48641	HepG2	HNRNPL
chr6	11207524	11207545	-	intron-Distal	4.56631	34.85755	HepG2	HNRNPL
chr6	11210962	11210986	-	intron-Distal	4.43649	40.36542	HepG2	PTBP1
chr6	11232668	11232721	-	intron-Distal	3.50881	5.49379	HepG2	TIAL1
chr6	11210935	11210962	-	intron-Distal	4.28028	29.40232	HepG2	PTBP1
chr6	11215042	11215101	-	intron-Distal	3.05893	3.51804	HepG2	HNRNPL
chr6	11210901	11210935	-	intron-Distal	3.15000	6.87018	HepG2	PTBP1
chr6	11207586	11207593	-	intron-Distal	3.92154	72.86896	HepG2	HNRNPL
chr6	11207608	11207656	-	intron-Distal	4.23368	400.00000	HepG2	HNRNPL
chr6	11197843	11197908	-	intron-Distal	3.62205	6.35990	HepG2	QKI
chr6	11207582	11207586	-	intron-Distal	3.59517	58.97588	HepG2	HNRNPL
chr6	11215992	11216065	-	intron-Distal	3.11686	6.19910	HepG2	PTBP1
chr6	11232659	11232712	-	intron-Distal	3.22116	7.86729	HepG2	RBM22
chr6	11228325	11228389	-	intron-Distal	4.38613	35.16034	HepG2	PTBP1
chr6	11207573	11207580	-	intron-Distal	3.58289	55.77055	HepG2	HNRNPL
chr6	11214636	11214742	-	intron-Distal	3.74301	4.61268	HepG2	FUS
chr6	11221769	11221828	-	intron-Distal	3.29355	7.20776	HepG2	XPO5
chr6	11213996	11214081	-	intron-Distal,intron-Proximal	4.18178	18.94504	HepG2	U2AF2
chr6	11222452	11222526	-	intron-Distal	3.85023	3.43967	HepG2	TAF15
chr6	11223233	11223389	-	intron-Distal	3.00469	27.32392	HepG2	HNRNPL
chr6	11229121	11229163	-	intron-Distal	3.54126	3.53952	HepG2	KHSRP
chr6	11225622	11225717	-	intron-Distal	3.07098	13.39649	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for NEDD9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NEDD9 is not available on ENCORE database.
140 RBPs can affect the levels of NEDD9.

The Knockdown/knockout RNA-Seq assay for NEDD9 is not available on ENCORE database.

140 RBPs can affect the gene expression of NEDD9 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NEDD9	ENSG00000111859.12	3142.43060	4609.55420	-0.55270	4.15950	2.09150	HepG2	AARS
NEDD9	ENSG00000111859.12	4465.83220	8958.18960	-1.00430	11.67740	9.96460	HepG2	ABCF1
NEDD9	ENSG00000111859.12	4594.32930	12679.28450	-1.46450	33.97240	32.38060	HepG2	AKAP1
NEDD9	ENSG00000111859.12	6594.80220	12444.78760	-0.91610	15.32220	13.09560	HepG2	AKAP8
NEDD9	ENSG00000111859.12	4536.10880	5775.47620	-0.34850	6.77370	5.62900	HepG2	AKAP8L
NEDD9	ENSG00000111859.12	5446.71420	9703.77160	-0.83320	4.16050	2.09160	HepG2	APOBEC3C
NEDD9	ENSG00000111859.12	5709.74900	10490.90040	-0.87760	15.81920	14.10710	HepG2	ASCC1
NEDD9	ENSG00000111859.12	6519.12750	8080.20570	-0.30970	3.62400	2.02570	HepG2	ATP5C1
NEDD9	ENSG00000111859.12	4872.07900	8033.80190	-0.72150	29.39670	27.58160	HepG2	AUH
NEDD9	ENSG00000111859.12	2479.66030	4702.98020	-0.92340	13.27450	11.14510	HepG2	BCCIP
NEDD9	ENSG00000111859.12	2481.35720	3897.45220	-0.65140	2.94370	2.32880	HepG2	BOP1
NEDD9	ENSG00000111859.12	5152.95080	7780.60430	-0.59450	12.96630	11.50560	HepG2	CALR
NEDD9	ENSG00000111859.12	3482.86210	5747.11450	-0.72260	37.20760	35.41270	HepG2	CKAP4
NEDD9	ENSG00000111859.12	2584.04540	10390.00110	-2.00750	28.73440	26.36690	HepG2	CNOT7
NEDD9	ENSG00000111859.12	9893.25290	7374.68060	0.42380	5.57550	4.04550	HepG2	CPSF7
NEDD9	ENSG00000111859.12	7599.59250	6012.34710	0.33790	5.88270	4.40060	HepG2	YBX3
NEDD9	ENSG00000111859.12	2006.90410	2905.12740	-0.53360	6.38890	4.85510	HepG2	CSTF2
NEDD9	ENSG00000111859.12	7320.99380	9021.28470	-0.30130	8.48910	7.29920	HepG2	DAZAP1
NEDD9	ENSG00000111859.12	3919.13650	5316.69470	-0.44000	12.06090	10.57100	HepG2	DDX19B
NEDD9	ENSG00000111859.12	4435.38870	7438.65370	-0.74600	15.18470	13.74530	HepG2	DDX21
NEDD9	ENSG00000111859.12	5129.24040	7282.57470	-0.50570	8.82060	7.21440	HepG2	DDX24
NEDD9	ENSG00000111859.12	4676.05760	12145.48850	-1.37710	35.57340	33.60960	HepG2	DDX3X
NEDD9	ENSG00000111859.12	15552.83620	10433.94830	0.57580	6.14980	5.25780	HepG2	DDX6
NEDD9	ENSG00000111859.12	3485.60200	5500.04930	-0.65800	12.28260	11.06900	HepG2	DKC1
NEDD9	ENSG00000111859.12	2312.59390	8079.99910	-1.80480	65.54780	62.55850	HepG2	EEF2
NEDD9	ENSG00000111859.12	3910.81870	6735.75550	-0.78440	13.58520	11.19690	HepG2	EFTUD2
NEDD9	ENSG00000111859.12	7371.46960	10029.69070	-0.44430	4.56480	3.81400	HepG2	EIF2S1
NEDD9	ENSG00000111859.12	3826.66910	6559.07900	-0.77740	12.11510	10.37100	HepG2	EIF3D
NEDD9	ENSG00000111859.12	5594.00430	7026.79510	-0.32900	4.06460	2.78300	HepG2	EIF3G
NEDD9	ENSG00000111859.12	7802.47980	11083.64030	-0.50640	4.78940	3.95170	HepG2	EIF4A3
NEDD9	ENSG00000111859.12	6238.84490	10792.14140	-0.79060	8.55070	7.37450	HepG2	EIF4B
NEDD9	ENSG00000111859.12	5800.04140	7758.40590	-0.41970	4.87210	3.46460	HepG2	ESF1
NEDD9	ENSG00000111859.12	3291.92230	9224.00500	-1.48650	121.33140	118.48170	HepG2	ETF1
NEDD9	ENSG00000111859.12	5098.36670	6656.92920	-0.38480	3.56240	1.60390	HepG2	EXOSC9
NEDD9	ENSG00000111859.12	3166.42260	5862.34520	-0.88860	26.38540	23.21190	HepG2	FAM120A
NEDD9	ENSG00000111859.12	5322.85620	7090.49460	-0.41370	5.50780	3.97840	HepG2	FASTKD2
NEDD9	ENSG00000111859.12	6373.08580	9045.08400	-0.50510	5.48830	4.43800	HepG2	FIP1L1
NEDD9	ENSG00000111859.12	6208.07670	8439.84680	-0.44310	3.96560	1.98300	HepG2	FMR1
NEDD9	ENSG00000111859.12	5418.44930	8799.21400	-0.69950	6.39670	4.74890	HepG2	FUS
NEDD9	ENSG00000111859.12	6656.24860	11183.97820	-0.74870	11.96710	10.63050	HepG2	FXR1
NEDD9	ENSG00000111859.12	2507.96020	10374.22750	-2.04840	67.39310	64.29410	HepG2	G3BP1
NEDD9	ENSG00000111859.12	7127.42340	11014.29390	-0.62790	9.02590	7.40400	HepG2	G3BP2
NEDD9	ENSG00000111859.12	3371.81350	5839.98900	-0.79240	14.09620	12.21100	HepG2	GEMIN5
NEDD9	ENSG00000111859.12	5213.42190	6708.92130	-0.36390	3.08510	2.00690	HepG2	GNB2L1
NEDD9	ENSG00000111859.12	2106.57720	4055.25460	-0.94490	4.33530	3.54560	HepG2	GPKOW
NEDD9	ENSG00000111859.12	5190.75940	9619.07630	-0.89000	8.87560	6.90580	HepG2	GRSF1
NEDD9	ENSG00000111859.12	5029.47410	8292.72930	-0.72140	6.04480	3.89280	HepG2	GTF2F1
NEDD9	ENSG00000111859.12	6882.04520	5488.25280	0.32640	6.70510	5.26850	HepG2	HDGF
NEDD9	ENSG00000111859.12	5281.95770	8434.77680	-0.67530	4.56120	2.74800	HepG2	HLTF
NEDD9	ENSG00000111859.12	6222.39710	8790.90810	-0.49850	3.61820	2.03680	HepG2	HNRNPA0
NEDD9	ENSG00000111859.12	1689.09550	5959.89280	-1.81900	79.22330	76.81960	HepG2	HNRNPA1
NEDD9	ENSG00000111859.12	9460.99070	8217.73740	0.20320	4.35800	3.52560	HepG2	HNRNPL
NEDD9	ENSG00000111859.12	3610.35670	6239.22920	-0.78920	13.45620	11.61920	HepG2	HNRNPM
NEDD9	ENSG00000111859.12	3276.54810	6585.60210	-1.00710	40.47350	38.37930	HepG2	HNRNPU
NEDD9	ENSG00000111859.12	4753.24580	13551.47470	-1.51150	32.47320	29.09000	HepG2	HSPD1
NEDD9	ENSG00000111859.12	5790.43740	10544.97910	-0.86480	15.75280	14.30070	HepG2	IGF2BP2
NEDD9	ENSG00000111859.12	3459.68280	9896.79890	-1.51630	10.99090	9.14540	HepG2	IGF2BP3
NEDD9	ENSG00000111859.12	9017.54740	6726.94630	0.42270	11.62410	10.23620	HepG2	ILF2
NEDD9	ENSG00000111859.12	6330.47360	10130.00500	-0.67820	5.91590	3.92450	HepG2	ILF3
NEDD9	ENSG00000111859.12	5681.17270	9905.34370	-0.80200	9.28350	6.95540	HepG2	KHDRBS1
NEDD9	ENSG00000111859.12	8169.77830	5254.90230	0.63650	27.64350	24.91720	HepG2	KIF1C
NEDD9	ENSG00000111859.12	5009.12740	13540.31550	-1.43460	15.95200	13.14940	HepG2	KRR1
NEDD9	ENSG00000111859.12	9380.55640	12551.31390	-0.42010	3.10430	2.22150	HepG2	LARP4
NEDD9	ENSG00000111859.12	3376.73930	6572.28630	-0.96080	23.41660	20.56990	HepG2	LARP7
NEDD9	ENSG00000111859.12	2476.54300	6901.51070	-1.47860	50.15330	46.08280	HepG2	LIN28B
NEDD9	ENSG00000111859.12	2632.99190	6593.98970	-1.32440	31.22620	27.46310	HepG2	LSM11
NEDD9	ENSG00000111859.12	2551.18770	11187.88740	-2.13270	78.48830	75.34020	HepG2	MAGOH
NEDD9	ENSG00000111859.12	3361.50020	5565.90690	-0.72750	11.04230	8.16110	HepG2	MARK2
NEDD9	ENSG00000111859.12	3785.17600	11250.33390	-1.57150	40.16870	37.99130	HepG2	MATR3
NEDD9	ENSG00000111859.12	3556.79770	6864.61160	-0.94860	10.45250	8.53200	HepG2	METAP2
NEDD9	ENSG00000111859.12	4742.83250	7318.13240	-0.62570	7.93330	6.62880	HepG2	MSI2
NEDD9	ENSG00000111859.12	9197.38860	6145.62890	0.58160	9.47920	7.28600	HepG2	NAA15
NEDD9	ENSG00000111859.12	7878.48940	11515.20350	-0.54750	6.26970	5.33240	HepG2	NCBP2
NEDD9	ENSG00000111859.12	4112.74200	5942.77960	-0.53100	7.01680	4.73240	HepG2	NIP7
NEDD9	ENSG00000111859.12	7161.71060	12841.30070	-0.84240	5.95480	3.84850	HepG2	NKRF
NEDD9	ENSG00000111859.12	7679.60940	8945.48070	-0.22010	2.55220	1.81980	HepG2	NOL12
NEDD9	ENSG00000111859.12	6361.61550	3431.93820	0.89030	12.99830	11.49810	HepG2	NSUN2
NEDD9	ENSG00000111859.12	2466.01360	4903.28200	-0.99160	9.03150	6.34620	HepG2	PA2G4
NEDD9	ENSG00000111859.12	4520.12830	6518.41170	-0.52820	7.77880	6.47400	HepG2	PARN
NEDD9	ENSG00000111859.12	6294.13510	10643.73970	-0.75790	35.80130	34.04160	HepG2	PCBP1
NEDD9	ENSG00000111859.12	6297.55120	8329.64650	-0.40350	2.32280	1.36870	HepG2	PCBP2
NEDD9	ENSG00000111859.12	8753.20800	5873.80200	0.57540	9.12020	7.82930	HepG2	PPIL4
NEDD9	ENSG00000111859.12	8478.94330	6920.11680	0.29300	5.62440	4.56170	HepG2	PRPF4
NEDD9	ENSG00000111859.12	4766.44050	8756.43350	-0.87740	8.71390	6.66020	HepG2	PRPF6
NEDD9	ENSG00000111859.12	1578.34480	3567.27330	-1.17640	24.19920	22.19180	HepG2	PRPF8
NEDD9	ENSG00000111859.12	4531.77610	10830.32440	-1.25690	75.24190	73.31220	HepG2	PTBP1
NEDD9	ENSG00000111859.12	5080.90660	8539.20960	-0.74900	12.42360	11.27990	HepG2	PUF60
NEDD9	ENSG00000111859.12	5408.31530	9064.70740	-0.74510	49.71060	47.83120	HepG2	PUM1
NEDD9	ENSG00000111859.12	4006.55460	9058.11140	-1.17680	50.03350	47.51200	HepG2	PUM2
NEDD9	ENSG00000111859.12	2701.59460	5855.60970	-1.11600	34.57420	32.85070	HepG2	PUS1
NEDD9	ENSG00000111859.12	10898.58770	8038.01100	0.43910	2.19090	1.55740	HepG2	RAVER1
NEDD9	ENSG00000111859.12	2219.90940	7709.53520	-1.79610	127.34200	124.92430	HepG2	RBM22
NEDD9	ENSG00000111859.12	12283.35190	10645.37200	0.20640	1.86680	1.30400	HepG2	RBM25
NEDD9	ENSG00000111859.12	3898.08420	7925.02730	-1.02370	22.38230	19.64160	HepG2	RBM27
NEDD9	ENSG00000111859.12	4384.40940	12053.17660	-1.45900	124.11300	121.93430	HepG2	NELFE
NEDD9	ENSG00000111859.12	5237.26470	11225.77730	-1.09990	75.14640	72.89360	HepG2	RECQL
NEDD9	ENSG00000111859.12	2877.38340	4517.60010	-0.65080	11.49010	10.26370	HepG2	RPLP0
NEDD9	ENSG00000111859.12	1636.75810	6382.37570	-1.96330	100.90610	98.22210	HepG2	RPS19
NEDD9	ENSG00000111859.12	2812.48660	7309.12220	-1.37790	30.76850	28.34740	HepG2	RPS2
NEDD9	ENSG00000111859.12	4476.09110	10438.06870	-1.22150	16.76380	14.87030	HepG2	RPS3A
NEDD9	ENSG00000111859.12	5122.39040	7460.86930	-0.54250	6.90480	5.21950	HepG2	RPS5
NEDD9	ENSG00000111859.12	2053.73890	3528.79740	-0.78090	10.02330	8.66370	HepG2	RRP9
NEDD9	ENSG00000111859.12	7888.01530	5864.67250	0.42750	10.67000	9.53230	HepG2	SAFB2
NEDD9	ENSG00000111859.12	4702.27600	6405.54530	-0.44600	4.82050	3.59380	HepG2	SERBP1
NEDD9	ENSG00000111859.12	6291.79590	8928.17740	-0.50490	2.72490	2.05610	HepG2	SF3A3
NEDD9	ENSG00000111859.12	11733.41570	3830.27390	1.61500	61.66780	59.04190	HepG2	SF3B1
NEDD9	ENSG00000111859.12	7675.65890	11275.90680	-0.55490	20.45500	19.09120	HepG2	SF3B4
NEDD9	ENSG00000111859.12	12104.76950	8187.68730	0.56390	29.07460	27.27530	HepG2	SLBP
NEDD9	ENSG00000111859.12	4731.73650	6839.03490	-0.53140	16.01960	14.66490	HepG2	SMN1
NEDD9	ENSG00000111859.12	5366.85320	8197.28880	-0.61110	5.25340	3.90820	HepG2	SMNDC1
NEDD9	ENSG00000111859.12	4879.30500	8707.59000	-0.83560	49.90790	48.47460	HepG2	SRFBP1
NEDD9	ENSG00000111859.12	1441.21090	11769.54780	-3.02970	99999.99999	99999.99999	HepG2	SRSF1
NEDD9	ENSG00000111859.12	6003.59420	8431.17680	-0.48990	5.45990	4.62430	HepG2	SRSF5
NEDD9	ENSG00000111859.12	1458.11000	7560.16900	-2.37430	278.57720	275.96620	HepG2	SSB
NEDD9	ENSG00000111859.12	4262.72270	9588.61260	-1.16950	101.56410	98.88730	HepG2	SUCLG1
NEDD9	ENSG00000111859.12	9234.35300	6105.64390	0.59680	10.66800	8.93430	HepG2	SUPT6H
NEDD9	ENSG00000111859.12	1216.72230	4603.15630	-1.91960	55.52140	53.29460	HepG2	SUPV3L1
NEDD9	ENSG00000111859.12	8114.83050	10578.76860	-0.38250	7.68290	6.82500	HepG2	TAF15
NEDD9	ENSG00000111859.12	2309.41710	13260.71830	-2.52160	34.52840	31.53030	HepG2	TBRG4
NEDD9	ENSG00000111859.12	8063.02250	9720.61690	-0.26970	2.83900	1.99210	HepG2	TIA1
NEDD9	ENSG00000111859.12	1656.59020	6398.52280	-1.94950	76.10480	74.16310	HepG2	TIAL1
NEDD9	ENSG00000111859.12	8964.55290	6456.38670	0.47340	14.50610	13.35760	HepG2	TRIM56
NEDD9	ENSG00000111859.12	6193.19980	8342.37970	-0.42980	6.70320	5.25400	HepG2	TUFM
NEDD9	ENSG00000111859.12	5890.12710	7736.13330	-0.39330	3.87750	3.13850	HepG2	U2AF1
NEDD9	ENSG00000111859.12	1512.94950	2719.27810	-0.84590	12.77680	11.17130	HepG2	UCHL5
NEDD9	ENSG00000111859.12	6367.65430	7917.93200	-0.31440	2.33270	1.68350	HepG2	UPF1
NEDD9	ENSG00000111859.12	5557.85370	8138.49950	-0.55020	9.83110	8.00120	HepG2	UTP18
NEDD9	ENSG00000111859.12	5843.09760	7644.44660	-0.38770	5.64200	4.83600	HepG2	UTP3
NEDD9	ENSG00000111859.12	6388.00380	9349.67830	-0.54960	4.12970	2.78240	HepG2	XPO5
NEDD9	ENSG00000111859.12	4647.29910	8839.97050	-0.92760	10.58680	8.66560	HepG2	XRCC6
NEDD9	ENSG00000111859.12	3624.11000	4531.30030	-0.32230	2.43520	1.75150	HepG2	XRN2
NEDD9	ENSG00000111859.12	2520.09730	6829.28890	-1.43830	137.20510	134.14090	HepG2	ZC3H8
NEDD9	ENSG00000111859.12	9515.96370	8708.20430	0.12790	2.11660	1.62000	HepG2	ZNF622
NEDD9	ENSG00000111859.12	20.29310	4.20500	2.27070	2.39250	1.65820	K562	CPSF6
NEDD9	ENSG00000111859.12	15.13340	0.00000	99999.99990	4.49520	3.60500	K562	EIF2S2
NEDD9	ENSG00000111859.12	19.79130	4.27550	2.21060	2.16900	1.40850	K562	FMR1
NEDD9	ENSG00000111859.12	9.13540	0.00000	99999.99990	1.99130	1.34430	K562	GRSF1
NEDD9	ENSG00000111859.12	5.24550	26.07360	-2.31340	3.20890	2.33820	K562	MTPAP
NEDD9	ENSG00000111859.12	6.44140	28.97070	-2.16920	3.26610	2.46100	K562	NSUN2
NEDD9	ENSG00000111859.12	3.59960	26.72640	-2.89240	4.28600	1.83360	K562	NUFIP2
NEDD9	ENSG00000111859.12	5.55270	29.28670	-2.39900	3.76270	2.68930	K562	SRPK2
NEDD9	ENSG00000111859.12	11.30530	30.71820	-1.44210	2.23930	1.58830	K562	UPF1
NEDD9	ENSG00000111859.12	3.10650	26.28460	-3.08080	4.60820	3.46270	K562	WDR3
NEDD9	ENSG00000111859.12	0.51560	27.33250	-5.72820	7.98200	6.61490	K562	WDR43
NEDD9	ENSG00000111859.12	16.01310	2.82460	2.50300	2.39620	1.60210	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NEDD9 is not available on ENCORE database.

2 RBPs can affect the splicing of NEDD9 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
MXE	NEDD9	ENSG00000111859.12	chr6	-	11190196	11191438	11193823	11193925	11188450	11188540	11213513	11213960	-0.11200	0.00043	0.02630	2included	HepG2	XPO5
MXE	NEDD9	ENSG00000111859.12	chr6	-	11190196	11191438	11192577	11192679	11188450	11188540	11193823	11193925	-0.12300	0.00048	0.01982	2included	HepG2	XRN2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NEDD9

General Information

Functions

Localization

Domains (AlphaFold: NEDD9)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NEDD9 is not avaliable on ENCORE database.

37 proteins are bound to NEDD9 RNA:

eCLIP assay for NEDD9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NEDD9 is not available on ENCORE database.

140 RBPs can affect the gene expression of NEDD9 :

The Knockdown/knockout RNA-Seq assay for NEDD9 is not available on ENCORE database.

2 RBPs can affect the splicing of NEDD9 :

The Knockdown/knockout RNA-Seq assay for NEDD9 is not avaliable on ENCORE database.