RWDD2A

General Information

Gene Name       : RWDD2A
Gene ID             : ENSG00000013392.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RWDD2A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RWDD2AENSG00000013392.72.451.972.21ENCSR000AEF
HepG2RWDD2AENSG00000013392.73.194.974.08ENCSR985KAT
K562RWDD2AENSG00000013392.71.421.441.43ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RWDD2A is not avaliable on ENCORE database.



Proteins bound to RNA
  • RWDD2A RNA is bound by 1 proteins.  







eCLIP assay for RWDD2A is not avaliable on ENCORE database.





1 proteins are bound to RWDD2A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr68390318083903228+intron-Proximal4.458763.93614HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RWDD2A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RWDD2A is not available on ENCORE database.

  • 47 RBPs can affect the levels of RWDD2A.  








The Knockdown/knockout RNA-Seq assay for RWDD2A is not available on ENCORE database.





47 RBPs can affect the gene expression of RWDD2A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RWDD2AENSG00000013392.6230.71840305.72610-0.406102.211601.51770HepG2AKAP8L
RWDD2AENSG00000013392.6313.54640220.311300.509002.296801.48000HepG2BCLAF1
RWDD2AENSG00000013392.6463.60100343.489000.432502.755601.98540HepG2CALR
RWDD2AENSG00000013392.6197.62790319.10600-0.691204.474503.09080HepG2CPSF7
RWDD2AENSG00000013392.6416.70600252.299400.723805.430204.51280HepG2DDX21
RWDD2AENSG00000013392.6349.15250247.062300.498902.797101.87770HepG2DDX24
RWDD2AENSG00000013392.6331.99520240.520500.464902.480301.39420HepG2FASTKD2
RWDD2AENSG00000013392.6234.97320391.36300-0.736004.147903.22070HepG2FIP1L1
RWDD2AENSG00000013392.6347.47710241.895000.522402.705502.06590HepG2HNRNPA1
RWDD2AENSG00000013392.6344.17910273.018700.334102.116901.46610HepG2ILF2
RWDD2AENSG00000013392.6171.47780354.52120-1.047907.143806.16500HepG2MATR3
RWDD2AENSG00000013392.6355.67210457.41860-0.363002.415301.70530HepG2NOL12
RWDD2AENSG00000013392.6467.05760322.594800.533804.416403.67930HepG2PCBP1
RWDD2AENSG00000013392.6321.10140436.62240-0.443402.761802.16560HepG2PUF60
RWDD2AENSG00000013392.6340.29480463.46620-0.445703.988703.30450HepG2PUM1
RWDD2AENSG00000013392.6288.61920365.30830-0.339901.814001.35600HepG2NELFE
RWDD2AENSG00000013392.6215.13590342.79540-0.672104.684303.82640HepG2RPLP0
RWDD2AENSG00000013392.6391.29460238.027600.717006.769905.82830HepG2SAFB2
RWDD2AENSG00000013392.6445.77910341.766100.383202.256101.71530HepG2SF3B4
RWDD2AENSG00000013392.6504.64750356.717100.500403.839103.30510HepG2SRSF1
RWDD2AENSG00000013392.6300.56100431.06780-0.520304.269503.52150HepG2SRSF5
RWDD2AENSG00000013392.6586.20990418.582700.485804.614903.98620HepG2SSB
RWDD2AENSG00000013392.6397.04300490.27130-0.304302.135901.57620HepG2SUCLG1
RWDD2AENSG00000013392.6347.51300258.548000.426501.996801.36860HepG2TARDBP
RWDD2AENSG00000013392.6200.73240347.97720-0.793706.433305.58330HepG2UTP3
RWDD2AENSG00000013392.683.31580251.85290-1.5959014.4347013.24230K562AGGF1
RWDD2AENSG00000013392.6107.82610262.05650-1.2812010.135508.78240K562AKAP8L
RWDD2AENSG00000013392.6196.65850274.94540-0.483502.693301.79270K562ATP5C1
RWDD2AENSG00000013392.6183.21710112.287800.706302.743001.87390K562BOP1
RWDD2AENSG00000013392.6206.30560282.04090-0.451102.539501.70480K562DKC1
RWDD2AENSG00000013392.691.69780143.44190-0.645502.197501.48250K562EIF3G
RWDD2AENSG00000013392.6202.2876097.743601.049206.144104.93010K562EIF4A3
RWDD2AENSG00000013392.6188.96040121.215800.640402.375901.72790K562G3BP2
RWDD2AENSG00000013392.6209.51290133.522800.649902.471301.75480K562GRSF1
RWDD2AENSG00000013392.690.84100187.66770-1.046803.581802.13360K562HNRNPA2B1
RWDD2AENSG00000013392.677.80420137.78230-0.824502.982202.36590K562HNRNPC
RWDD2AENSG00000013392.6321.07860141.051801.186609.570408.11550K562HSPD1
RWDD2AENSG00000013392.6144.60020278.13500-0.943704.684703.56060K562KIF1C
RWDD2AENSG00000013392.6181.86400266.22130-0.549802.266801.32500K562MAK16
RWDD2AENSG00000013392.6200.65670311.57760-0.634903.973602.85100K562MBNL1
RWDD2AENSG00000013392.6107.39910218.39090-1.023904.766303.50890K562NAA15
RWDD2AENSG00000013392.6159.6457097.617700.709602.667901.46140K562NCBP2
RWDD2AENSG00000013392.664.22510164.16480-1.353904.680803.30060K562PABPN1
RWDD2AENSG00000013392.661.69030259.94440-2.0751018.6734017.29380K562PUS1
RWDD2AENSG00000013392.692.27760253.23000-1.4564012.5307011.27280K562RBM15
RWDD2AENSG00000013392.6202.5005093.164901.120005.795804.60810K562RPS19
RWDD2AENSG00000013392.6205.50290121.416500.759104.209403.22230K562U2AF2
RWDD2AENSG00000013392.6258.85360150.446600.782805.301804.34170K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RWDD2A is not available on ENCORE database.





5 RBPs can affect the splicing of RWDD2A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERWDD2AENSG00000013392.6chr6+8390489883904990839040308390437183905313839086510.327000.001240.03208includedHepG2HNRNPK
SERWDD2AENSG00000013392.6chr6+8390489883904990839040308390437183905313839086510.393000.000030.00438includedHepG2HNRNPL
SERWDD2AENSG00000013392.6chr6+8390491383904990839040308390437183905313839086510.283000.001750.09528includedHepG2IGF2BP3
SERWDD2AENSG00000013392.6chr6+8390491383904990839040308390437183905313839086510.188000.000440.02511includedHepG2PCBP1
SERWDD2AENSG00000013392.6chr6+8390491383904990839040308390437183905313839086510.421000.000510.09714includedHepG2EIF3D

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RWDD2A is not avaliable on ENCORE database.