CAPN1

General Information

Gene Name       : CAPN1
Gene ID             : ENSG00000014216.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CAPN1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CAPN1ENSG00000014216.1514.9052.1633.53ENCSR000AEF
HepG2CAPN1ENSG00000014216.1561.8530.1546.00ENCSR985KAT
K562CAPN1ENSG00000014216.15132.1696.49114.32ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CAPN1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CAPN1 RNA is bound by 32 proteins.  







eCLIP assay for CAPN1 is not avaliable on ENCORE database.





32 proteins are bound to CAPN1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr116497891164978993+3'-UTR3.104175.75907K562PABPC4
chr116495538064955432+3'-UTR,CDS,intron-Proximal4.4999511.57554HepG2SF3A3
chr116495543164955514+3'-UTR,CDS,intron-Proximal3.2180812.63903HepG2PPIG
chr116497903564979107+3'-UTR3.3868811.88356HepG2PCBP2
chr116497890664978996+3'-UTR3.418394.51787HepG2AKAP1
chr116497914164979271+3'-UTR4.9815012.57965HepG2UPF1
chr116497934864979422+3'-UTR3.622015.54091HepG2LARP4
chr116497935064979385+3'-UTR3.474758.86182K562TIA1
chr116497924764979305+3'-UTR3.6029710.06226HepG2PCBP2
chr116497923564979315+3'-UTR4.399779.31157K562PCBP1
chr116497930564979332+3'-UTR3.277173.15612HepG2PCBP2
chr116497934264979429+3'-UTR3.2661316.64518K562UPF1
chr116497901364979116+3'-UTR4.160826.36332HepG2UPF1
chr116497876564978816+3'-UTR3.487674.94367HepG2PCBP2
chr116497938564979402+3'-UTR3.220106.88539K562TIA1
chr116497890464978995+3'-UTR4.243075.64146HepG2UPF1
chr116495013364950242+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.186413.29499HepG2PRPF4
chr116497913464979207+3'-UTR3.8093313.72241K562YBX3
chr116497900564979064+3'-UTR3.266138.81237K562UPF1
chr116495546864955511+3'-UTR,CDS3.507606.28780K562DDX24
chr116497901464979104+3'-UTR4.3313315.50228K562PCBP1
chr116497901864979108+3'-UTR3.050223.65697HepG2PABPN1
chr116495469764954775+3'-UTR,CDS,intron-Proximal3.384419.94493HepG2PPIG
chr116497902364979123+3'-UTR4.317584.13758HepG2AKAP1
chr116497907364979127+3'-UTR3.618517.72939K562PABPC4
chr116497923664979261+3'-UTR4.417575.42839K562PABPC4
chr116497934464979428+3'-UTR3.3163416.34984K562PABPC4
chr116497875564978803+3'-UTR3.961236.95450K562PCBP1
chr116497914064979195+3'-UTR3.402354.51483HepG2PABPN1
chr116497936264979441+3'-UTR4.139663.61890HepG2G3BP1
chr116495017164950264+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.645157.35825K562DDX3X
chr116494939464949448+5'-UTR,intron-Distal,intron-Proximal3.191186.28230HepG2PPIG
chr116494937564949442+5'-UTR,intron-Distal,intron-Proximal3.097783.83168HepG2GTF2F1
chr116494940264949433+5'-UTR,intron-Distal,intron-Proximal3.127683.39477K562BUD13
chr116494937964949444+5'-UTR,intron-Distal,intron-Proximal4.797744.08666K562NCBP2
chr116494937564949464+5'-UTR,intron-Distal,intron-Proximal4.2996614.83799HepG2PRPF4
chr116494938564949465+5'-UTR,intron-Distal,intron-Proximal4.4262212.03105K562GTF2F1
chr116494940064949485+5'-UTR,intron-Distal,intron-Proximal4.967084.66602K562DDX3X
chr116494939264949477+5'-UTR,intron-Distal,intron-Proximal3.823975.01580HepG2DDX3X
chr116494939064949449+5'-UTR,intron-Distal,intron-Proximal5.107738.08662K562DDX24
chr116497788864977923+CDS4.446703.75233K562FXR2
chr116497567464975726+CDS,intron-Proximal4.495385.12780HepG2G3BP1
chr116497732164977388+CDS3.690594.93175HepG2GRWD1
chr116495377364953804+CDS,intron-Distal4.281183.82843HepG2PPIG
chr116495056264950623+CDS,intron-Distal,intron-Proximal4.623634.09264K562AQR
chr116495105464951113+CDS,intron-Proximal3.251765.78875K562PRPF8
chr116497866664978742+CDS,intron-Proximal4.8727315.11056K562SF3B4
chr116497679264976855+CDS,intron-Proximal3.658638.46997HepG2PPIG
chr116497424964974290+CDS,intron-Proximal3.317266.92518HepG2PPIG
chr116495380464953850+CDS,intron-Distal,intron-Proximal3.903994.75655HepG2PRPF8
chr116497748864977500+CDS,intron-Proximal3.127823.63043HepG2GRWD1
chr116495348064953518+CDS4.561455.80866K562BUD13
chr116495040964950442+CDS,intron-Proximal4.816385.56813HepG2PPIG
chr116497317864973232+CDS,intron-Proximal3.475047.83009HepG2PRPF8
chr116497782664977849+CDS4.1354915.85943K562YBX3
chr116495590964955957+CDS3.941907.83545HepG2PPIG
chr116495588464955909+CDS,intron-Proximal4.242728.40228HepG2PPIG
chr116495592764955987+CDS,intron-Proximal3.799797.56654HepG2PRPF8
chr116497732264977385+CDS4.462627.39346K562DDX24
chr116497387564973951+CDS,intron-Proximal5.4732033.44555K562SF3B4
chr116497386364973946+CDS,intron-Proximal3.504376.56588HepG2SF3B4
chr116497400664974126+CDS3.640903.10765HepG2YBX3
chr116497556064975591+CDS3.041145.11643K562ZNF622
chr116497567364975695+CDS,intron-Proximal4.885646.93329K562DDX24
chr116497386364973956+CDS,intron-Proximal4.1735211.31924HepG2SF3A3
chr116495621564956245+CDS,intron-Proximal4.2845912.40248K562AQR
chr116497555464975569+CDS4.308005.64870K562DDX24
chr116497216064972300+CDS3.034177.36020HepG2RPS3
chr116495104164951115+CDS,intron-Proximal4.4107414.40440HepG2PRPF8
chr116497731864977389+CDS,intron-Proximal4.0993314.66124HepG2PPIG
chr116497562964975700+CDS,intron-Proximal4.022649.48554K562SF3B4
chr116495063164950667+CDS,intron-Distal3.761505.24452HepG2PPIG
chr116497212764972170+CDS,intron-Proximal4.077075.63763K562AQR
chr116497312864973221+CDS,intron-Proximal4.0235412.98847K562SF3B4
chr116497781564977823+CDS3.8284310.17756K562YBX3
chr116497784964977856+CDS4.1058815.41209K562YBX3
chr116497786064977880+CDS3.472895.79072K562YBX3
chr116497748864977563+CDS,intron-Proximal4.7624518.05445HepG2PPIG
chr116497408364974144+CDS3.251153.96512K562FXR2
chr116497425164974289+CDS3.329537.29897K562DDX24
chr116495379164953802+CDS,intron-Distal3.210625.38711K562YBX3
chr116497408464974146+CDS,intron-Proximal3.397863.77473HepG2PABPN1
chr116497226064972308+CDS3.455836.26235K562FMR1
chr116497749864977542+CDS3.861817.46470K562YBX3
chr116497572564975731+CDS3.774443.04209K562DDX24
chr116497424964974289+CDS,intron-Proximal3.166186.45164K562BUD13
chr116497678764976843+CDS,intron-Proximal4.278256.83823K562DDX24
chr116497830464978392+CDS,intron-Proximal3.4529610.35976K562PRPF8
chr116497679464976857+CDS4.605385.03717HepG2PABPN1
chr116495029064950320+CDS,intron-Proximal3.393963.93645HepG2PPIG
chr116495338764953437+CDS,intron-Proximal4.363075.42152HepG2GRWD1
chr116497556964975591+CDS4.813446.93329K562DDX24
chr116497748764977565+CDS,intron-Proximal4.9264413.49179K562DDX24
chr116497833764978391+CDS,intron-Proximal4.6633913.80141HepG2PRPF8
chr116497216964972248+CDS3.6217612.80490HepG2PPIG
chr116495364064953749+CDS,intron-Distal,intron-Proximal3.703197.63569K562FXR2
chr116497567764975734+CDS,intron-Proximal4.219793.61671HepG2PABPN1
chr116495369064953807+CDS,intron-Distal3.639664.04629HepG2G3BP1
chr116497208864972162+CDS,intron-Proximal6.1931614.59522K562SF3B4
chr116495587364955958+CDS,intron-Proximal4.6514612.73172K562DDX24
chr116497567564975725+CDS,intron-Proximal3.544829.00464K562ZNF622
chr116495340164953517+CDS4.3661518.18568HepG2PPIG
chr116495380764953865+CDS,intron-Distal,intron-Proximal3.442344.41130K562AQR
chr116497405764974097+CDS3.391103.95937K562UCHL5
chr116495018164950253+CDS,intron-Distal4.796155.31712K562METAP2
chr116495591764955958+CDS3.835343.14999HepG2GRWD1
chr116496706564967176+intron-Distal3.647165.93532K562PTBP1
chr116495414764954269+intron-Distal3.743833.06084HepG2HNRNPK
chr116497815764978213+intron-Distal,intron-Proximal4.232095.42080K562EFTUD2
chr116495045664950587+intron-Distal,intron-Proximal6.4541419.97156K562AKAP8L
chr116497852564978566+intron-Distal5.351835.43043K562EFTUD2
chr116497380164973843+intron-Distal,intron-Proximal5.612936.91748K562SF3B4
chr116497852164978560+intron-Distal4.502465.29191K562BUD13
chr116497851464978574+intron-Distal3.200264.86973K562UCHL5
chr116497851264978579+intron-Distal4.8546310.03191K562SF3B4
chr116497429664974336+intron-Proximal4.353343.70761K562AQR
chr116497420364974250+intron-Proximal4.143395.63851K562SF3B4
chr116497867164978713+intron-Proximal4.232095.42080K562EFTUD2
chr116497573364975759+intron-Proximal3.413133.94787K562AQR
chr116497839264978438+intron-Proximal3.559684.35635K562PRPF8
chr116497575964975775+intron-Proximal4.284596.48405K562AQR
chr116495624564956291+intron-Proximal5.6323419.39840K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CAPN1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CAPN1 is not available on ENCORE database.

  • 105 RBPs can affect the levels of CAPN1.  








The Knockdown/knockout RNA-Seq assay for CAPN1 is not available on ENCORE database.





105 RBPs can affect the gene expression of CAPN1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CAPN1ENSG00000014216.113139.862201835.251000.7746029.9076028.41560HepG2ACO1
CAPN1ENSG00000014216.113071.519402111.032500.540903.587502.99230HepG2AKAP1
CAPN1ENSG00000014216.112363.640501559.887800.599505.884004.39720HepG2AKAP8
CAPN1ENSG00000014216.112214.647701843.670800.264403.351402.51730HepG2AKAP8L
CAPN1ENSG00000014216.112244.610502786.46590-0.312004.670103.81880HepG2AUH
CAPN1ENSG00000014216.111339.782801787.18320-0.415703.992903.28820HepG2BOP1
CAPN1ENSG00000014216.112415.923801834.608300.397008.735207.68270HepG2CKAP4
CAPN1ENSG00000014216.111228.642801640.71170-0.417303.620102.84450HepG2CPSF6
CAPN1ENSG00000014216.112903.629601665.060900.8022025.0912023.55720HepG2CELF1
CAPN1ENSG00000014216.112047.236901697.232200.270404.025903.04220HepG2DDX19B
CAPN1ENSG00000014216.111636.941101183.281400.468104.979204.09640HepG2DDX21
CAPN1ENSG00000014216.11843.913001158.89560-0.457603.858602.76800HepG2DDX24
CAPN1ENSG00000014216.113058.930002021.962700.597206.580905.65820HepG2DDX3X
CAPN1ENSG00000014216.113530.648801473.081201.261009.029207.72460HepG2DDX55
CAPN1ENSG00000014216.112388.207801737.488800.458803.579902.88500HepG2DDX6
CAPN1ENSG00000014216.111406.109801092.867600.363502.652101.96000HepG2DNAJC21
CAPN1ENSG00000014216.111434.603901083.296300.405105.892104.99360HepG2DNAJC2
CAPN1ENSG00000014216.112544.376401669.713500.607606.776405.87550HepG2EIF2S1
CAPN1ENSG00000014216.111283.762301844.95080-0.523204.377203.57700HepG2EIF4A3
CAPN1ENSG00000014216.112377.659201796.850900.404001.941401.35840HepG2EIF4B
CAPN1ENSG00000014216.112465.400003199.36450-0.376005.057704.28860HepG2ETF1
CAPN1ENSG00000014216.112141.321601793.151700.255902.073501.35190HepG2EWSR1
CAPN1ENSG00000014216.113309.574302269.034500.544503.200202.37820HepG2FIP1L1
CAPN1ENSG00000014216.11529.466201225.94030-1.211305.834904.06300HepG2FKBP4
CAPN1ENSG00000014216.112943.158301862.322100.660208.184107.04120HepG2FXR1
CAPN1ENSG00000014216.111337.66450942.269900.505403.178802.21020HepG2GEMIN5
CAPN1ENSG00000014216.111520.574901103.338400.462602.035601.47140HepG2HNRNPA1
CAPN1ENSG00000014216.112851.775401749.915000.7045010.467409.18670HepG2HNRNPK
CAPN1ENSG00000014216.111930.142501630.604500.243203.762802.98410HepG2HNRNPL
CAPN1ENSG00000014216.111213.667001774.86540-0.548305.680504.81280HepG2HNRNPLL
CAPN1ENSG00000014216.112102.881301219.170200.7864016.2469014.87320HepG2HNRNPU
CAPN1ENSG00000014216.112327.110701755.434800.406602.378201.74630HepG2IGF2BP2
CAPN1ENSG00000014216.111562.195501245.337500.326905.378104.38270HepG2ILF2
CAPN1ENSG00000014216.112294.931901836.170900.321702.988202.14830HepG2MSI2
CAPN1ENSG00000014216.111259.030401810.25120-0.523903.032802.01500HepG2MTPAP
CAPN1ENSG00000014216.112956.981201917.279800.625006.753605.78270HepG2NCBP2
CAPN1ENSG00000014216.112430.895001775.100700.453507.244306.02270HepG2NOL12
CAPN1ENSG00000014216.111165.15300792.138500.556603.157201.60760HepG2NOLC1
CAPN1ENSG00000014216.112630.765001353.417100.958806.160204.48880HepG2NONO
CAPN1ENSG00000014216.111171.751601573.79720-0.425603.569602.72030HepG2NSUN2
CAPN1ENSG00000014216.111735.012101177.020800.559702.355701.54870HepG2PABPC1
CAPN1ENSG00000014216.111347.860701087.397800.309703.193502.40710HepG2PPIL4
CAPN1ENSG00000014216.111093.924401639.84000-0.5840011.5918010.16650HepG2PRPF4
CAPN1ENSG00000014216.111986.288301135.567900.806608.467007.13810HepG2PRPF8
CAPN1ENSG00000014216.112764.261401896.774500.5432012.8075011.80230HepG2PTBP1
CAPN1ENSG00000014216.112643.437701694.549800.6414010.663709.59560HepG2PUF60
CAPN1ENSG00000014216.112511.921701798.910600.4816014.1049012.98300HepG2PUM1
CAPN1ENSG00000014216.112250.295601797.552400.324002.451901.82090HepG2PUM2
CAPN1ENSG00000014216.112126.263901869.286500.185702.073801.52240HepG2PUS1
CAPN1ENSG00000014216.111763.048902054.19600-0.220501.912801.37850HepG2QKI
CAPN1ENSG00000014216.111073.95500756.875300.504703.673101.65430HepG2RBM14
CAPN1ENSG00000014216.112107.591702674.04980-0.343404.692004.06300HepG2RBM22
CAPN1ENSG00000014216.112236.389601864.336700.262402.249501.63640HepG2RBM25
CAPN1ENSG00000014216.112724.540102110.905500.368106.270605.51150HepG2NELFE
CAPN1ENSG00000014216.111773.270501030.031900.783608.325407.32580HepG2RPS19
CAPN1ENSG00000014216.111886.970701306.699900.530002.216401.49620HepG2RPS2
CAPN1ENSG00000014216.111457.554801085.709500.424805.766204.88920HepG2SAFB2
CAPN1ENSG00000014216.113213.358801943.340500.725406.889805.79280HepG2SF3A3
CAPN1ENSG00000014216.111097.472801756.73460-0.678709.064907.85870HepG2SF3B1
CAPN1ENSG00000014216.112618.554801974.738600.407007.592606.69150HepG2SF3B4
CAPN1ENSG00000014216.111939.287601624.955200.255003.935803.12230HepG2SLBP
CAPN1ENSG00000014216.112294.710601266.094700.8578035.6754033.81530HepG2SMN1
CAPN1ENSG00000014216.111642.779801115.465600.558402.177801.33930HepG2SMNDC1
CAPN1ENSG00000014216.111423.59490745.892000.932402.695001.40780HepG2SNRNP200
CAPN1ENSG00000014216.111224.435201954.68660-0.674804.875703.82470HepG2SNRNP70
CAPN1ENSG00000014216.113936.147803020.193400.382008.630207.87980HepG2SRFBP1
CAPN1ENSG00000014216.112309.020701673.206400.464609.656808.58200HepG2SRSF5
CAPN1ENSG00000014216.111873.721701126.225500.734303.868702.54610HepG2STIP1
CAPN1ENSG00000014216.113150.424201902.823600.7273013.0892011.90210HepG2SUCLG1
CAPN1ENSG00000014216.111045.352301852.75930-0.8257019.1146017.83170HepG2TAF15
CAPN1ENSG00000014216.111384.66480982.601200.494802.370401.44190HepG2TFIP11
CAPN1ENSG00000014216.111414.769901702.37510-0.267002.275301.51520HepG2TIA1
CAPN1ENSG00000014216.111564.060001184.553200.400904.566603.95820HepG2TIAL1
CAPN1ENSG00000014216.111911.405501195.248000.6772017.2434015.99510HepG2TRIM56
CAPN1ENSG00000014216.112168.647901655.619600.389304.592603.43310HepG2TUFM
CAPN1ENSG00000014216.112462.964001940.876400.343602.891302.25000HepG2U2AF1
CAPN1ENSG00000014216.112263.41260866.058801.385905.607804.15590HepG2U2AF2
CAPN1ENSG00000014216.112645.096501752.523800.593803.917902.91270HepG2UBE2L3
CAPN1ENSG00000014216.111441.155601663.91870-0.207401.935901.41670HepG2UTP3
CAPN1ENSG00000014216.111844.553901200.156900.619902.949901.85370HepG2XRCC6
CAPN1ENSG00000014216.113290.948401895.460200.7959038.0778036.65640HepG2ZNF622
CAPN1ENSG00000014216.113708.058102883.693500.362607.306906.44890K562AGGF1
CAPN1ENSG00000014216.114104.366903168.789500.373104.150002.89270K562AKAP8
CAPN1ENSG00000014216.113704.079103000.625200.303802.883702.21670K562AKAP8L
CAPN1ENSG00000014216.112453.324404200.36870-0.7758014.1052012.92400K562AQR
CAPN1ENSG00000014216.111952.889201560.457100.323503.724102.47330K562CSTF2
CAPN1ENSG00000014216.114815.873705967.05830-0.309204.228603.01470K562CELF1
CAPN1ENSG00000014216.113162.425601840.789200.780603.578402.10200K562EEF2
CAPN1ENSG00000014216.112793.668001778.020300.651803.508202.47350K562EFTUD2
CAPN1ENSG00000014216.114269.845503401.177400.328005.159104.22070K562EIF2S2
CAPN1ENSG00000014216.111499.12910930.641300.6877011.7136010.05530K562EIF3G
CAPN1ENSG00000014216.112884.507202303.344300.324502.943102.06780K562FIP1L1
CAPN1ENSG00000014216.112775.262302281.227000.282703.636602.95740K562FXR1
CAPN1ENSG00000014216.11168.58410655.32550-1.9587012.3871010.66470K562G3BP2
CAPN1ENSG00000014216.111425.909401894.64460-0.410003.056502.07230K562HNRNPM
CAPN1ENSG00000014216.112561.579801525.196700.747902.841501.79900K562IGF2BP2
CAPN1ENSG00000014216.112376.190801885.140500.333903.186601.51350K562LSM11
CAPN1ENSG00000014216.114180.863603567.308000.228902.238701.43520K562MBNL1
CAPN1ENSG00000014216.112532.514303346.00790-0.401908.658107.30370K562MTPAP
CAPN1ENSG00000014216.113414.273602122.316600.685803.484402.33670K562PABPN1
CAPN1ENSG00000014216.112601.171401556.121200.741108.202307.10040K562PTBP1
CAPN1ENSG00000014216.114445.860805294.51590-0.252002.192601.46720K562PUF60
CAPN1ENSG00000014216.114355.335705631.92600-0.370805.668804.09830K562PUM1
CAPN1ENSG00000014216.114505.948902975.715600.598504.495803.82680K562PUS1
CAPN1ENSG00000014216.113676.942802899.453900.342605.057004.27740K562RBM15
CAPN1ENSG00000014216.112433.862401454.391000.742704.367402.48580K562RBM34
CAPN1ENSG00000014216.111778.981201253.038000.505504.666603.32190K562RPS3
CAPN1ENSG00000014216.113242.849902554.873200.343903.265102.08820K562SAFB
CAPN1ENSG00000014216.111010.50270680.894100.569506.908105.52130K562SF3B4
CAPN1ENSG00000014216.112041.943401639.222900.316802.648101.65110K562SRFBP1
CAPN1ENSG00000014216.113189.645603758.40940-0.236704.208203.07940K562SRPK2
CAPN1ENSG00000014216.112185.171301525.670000.518202.492701.81500K562SRSF1
CAPN1ENSG00000014216.111747.766601209.609600.530906.650504.89410K562SRSF4
CAPN1ENSG00000014216.112115.735101441.257600.553703.301902.13650K562SRSF5
CAPN1ENSG00000014216.112323.901603021.97000-0.378903.537001.97890K562SSRP1
CAPN1ENSG00000014216.11329.45070643.23500-0.965303.859702.01710K562TAF15
CAPN1ENSG00000014216.112930.137201543.749200.924405.179304.19570K562TARDBP
CAPN1ENSG00000014216.112600.523701489.206700.804208.584607.02990K562TIA1
CAPN1ENSG00000014216.112503.333801462.132100.775704.802403.28840K562TRA2A
CAPN1ENSG00000014216.112647.840601936.623300.451205.232203.83080K562TRIM56
CAPN1ENSG00000014216.11457.67850655.62760-0.518503.510602.60630K562U2AF2
CAPN1ENSG00000014216.112889.082203507.54740-0.279905.074603.95890K562WDR43
CAPN1ENSG00000014216.113722.983204731.84980-0.345903.632502.61840K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CAPN1 is not available on ENCORE database.





19 RBPs can affect the splicing of CAPN1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECAPN1ENSG00000014216.11chr11+6495488864955042649546666495476964955425649555110.062000.000190.00671includedHepG2HNRNPK
SECAPN1ENSG00000014216.11chr11+6496320264963339649560566495621764972153649723290.053000.000120.00799includedHepG2MATR3
RICAPN1ENSG00000014216.11chr11+6497731964977567649773196497738864977488649775670.243000.000170.00416includedK562SF3B4
RICAPN1ENSG00000014216.11chr11+6497828464979476649782846497834364978730649794760.163000.000000.00000includedK562PUS1
RICAPN1ENSG00000014216.11chr11+6497731964977567649773196497738864977488649775670.066000.003100.02053includedK562PUS1
RICAPN1ENSG00000014216.11chr11+649782846497947664978284649783436497873064979476-0.051000.000000.00000excludedK562HNRNPC
RICAPN1ENSG00000014216.11chr11+6497828464979476649782846497834364978730649794760.072000.000080.01302includedK562SMNDC1
RICAPN1ENSG00000014216.11chr11+6497731964977567649773196497738864977488649775670.068000.005200.05341includedK562AGGF1
RICAPN1ENSG00000014216.11chr11+6497828464979476649782846497834364978730649794760.103000.000000.00000includedK562AGGF1
RICAPN1ENSG00000014216.11chr11+6497731964977567649773196497738864977488649775670.118000.000000.00002includedK562PRPF8
RICAPN1ENSG00000014216.11chr11+6497828464979476649782846497834364978730649794760.119000.000000.00003includedHepG2QKI
RICAPN1ENSG00000014216.11chr11+6497828464979476649782846497834364978730649794760.164000.000000.00000includedK562AKAP8L
RICAPN1ENSG00000014216.11chr11+6497828464979476649782846497834364978730649794760.077000.000970.01160includedHepG2TAF15
RICAPN1ENSG00000014216.11chr11+649782846497947664978284649783436497873064979476-0.111000.000300.02692excludedK562KHSRP
RICAPN1ENSG00000014216.11chr11+6497828464979476649782846497834364978730649794760.127000.000000.00000includedK562RBM15
RICAPN1ENSG00000014216.11chr11+6497731964977567649773196497738864977488649775670.083000.001670.01969includedK562RBM15
RICAPN1ENSG00000014216.11chr11+6497828464979476649782846497834364978730649794760.401000.000000.00012includedK562U2AF2
RICAPN1ENSG00000014216.11chr11+6497731964977567649773196497738864977488649775670.108000.002030.02605includedK562UTP18
RICAPN1ENSG00000014216.11chr11+6497828464979476649782846497834364978730649794760.120000.000000.00000includedK562UTP18
RICAPN1ENSG00000014216.11chr11+6497731964977567649773196497738864977488649775670.129000.000000.00000includedK562EFTUD2
RICAPN1ENSG00000014216.11chr11+6497828464979476649782846497834364978730649794760.100000.000000.00002includedK562AQR
RICAPN1ENSG00000014216.11chr11+6497731964977567649773196497738864977488649775670.059000.000000.00000includedK562AQR
RICAPN1ENSG00000014216.11chr11+649782846497947664978284649783436497873064979476-0.126000.000000.00003excludedK562PTBP1
RICAPN1ENSG00000014216.11chr11+649782846497947664978284649783436497873064979476-0.111000.000000.00000excludedK562FXR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CAPN1 is not avaliable on ENCORE database.