TBCEL

General Information

Gene Name       : TBCEL
Gene ID             : ENSG00000154114.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TBCEL)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TBCELENSG00000154114.125.845.805.82ENCSR000AEF
HepG2TBCELENSG00000154114.124.087.075.58ENCSR985KAT
K562TBCELENSG00000154114.121.210.951.08ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TBCEL is not avaliable on ENCORE database.



Proteins bound to RNA
  • TBCEL RNA is bound by 10 proteins.  







eCLIP assay for TBCEL is not avaliable on ENCORE database.





10 proteins are bound to TBCEL RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11120894920120895001+5'-UTR,intron-Distal,intron-Proximal5.128768.56618HepG2CSTF2T
chr11120894812120895010+5'-UTR,intron-Distal,intron-Proximal5.3373610.29539HepG2NCBP2
chr11120894859120894977+5'-UTR,intron-Distal,intron-Proximal5.046918.56484HepG2PRPF4
chr11120925751120925797+5'-UTR,CDS,intron-Distal,intron-Proximal4.098113.35169HepG2U2AF2
chr11120894830120894918+5'-UTR,intron-Proximal3.793074.37279HepG2CSTF2T
chr11120894984120895017+5'-UTR,intron-Distal,intron-Proximal4.632105.01842HepG2PRPF8
chr11120894921120894985+5'-UTR,intron-Distal,intron-Proximal3.866603.30705HepG2GTF2F1
chr11120895265120895382+intron-Distal4.096447.17209K562DROSHA
chr11120895238120895353+intron-Distal4.168235.23323K562GTF2F1
chr11120895080120895143+intron-Distal,intron-Proximal4.090083.16310HepG2CSTF2T
chr11120895247120895355+intron-Distal4.222617.45939HepG2GTF2F1
chr11120914589120914641+intron-Distal3.761063.04224HepG2SUGP2
chr11120895253120895327+intron-Distal4.025856.85787HepG2CSTF2T
chr11120895349120895420+intron-Distal4.289095.01722K562CSTF2T
chr11120895017120895046+intron-Distal,intron-Proximal3.509743.56873HepG2PRPF8
chr11120895228120895355+intron-Distal4.8298514.08721HepG2PRPF4
chr11120900592120900641+intron-Distal3.622363.55754HepG2U2AF2
chr11120895236120895328+intron-Distal4.3934013.51657HepG2FAM120A
chr11120895025120895118+intron-Distal,intron-Proximal3.109974.32662HepG2RBM22
chr11120895142120895207+intron-Distal4.244154.61288HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TBCEL is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TBCEL is not available on ENCORE database.

  • 68 RBPs can affect the levels of TBCEL.  








The Knockdown/knockout RNA-Seq assay for TBCEL is not available on ENCORE database.





68 RBPs can affect the gene expression of TBCEL :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TBCELENSG00000154114.8941.02370659.963500.511703.343402.76670HepG2AKAP1
TBCELENSG00000154114.8703.72290546.082300.365802.046801.36730HepG2ASCC1
TBCELENSG00000154114.8698.05280391.218600.835309.106108.09810HepG2BOP1
TBCELENSG00000154114.8707.28490461.443200.616006.282205.18110HepG2CALR
TBCELENSG00000154114.8779.16010398.901900.965806.416905.25100HepG2CNOT7
TBCELENSG00000154114.8533.54030651.28680-0.287702.557601.83960HepG2DAZAP1
TBCELENSG00000154114.8583.69720397.892700.552704.396503.23460HepG2DDX24
TBCELENSG00000154114.8848.65650632.233400.424602.688602.07070HepG2DDX3X
TBCELENSG00000154114.8224.02630418.54370-0.9017011.151009.94030HepG2DNAJC2
TBCELENSG00000154114.8785.47560577.024700.444802.748302.11140HepG2EIF4A3
TBCELENSG00000154114.8527.30080642.46370-0.285002.175301.41830HepG2EIF4G1
TBCELENSG00000154114.8947.06380793.864400.254502.238001.68780HepG2ETF1
TBCELENSG00000154114.8309.45960418.10240-0.434102.560301.75720HepG2EWSR1
TBCELENSG00000154114.8201.60690294.76170-0.548002.690401.80630HepG2GEMIN5
TBCELENSG00000154114.8729.55900407.159600.841307.654606.62370HepG2GPKOW
TBCELENSG00000154114.8247.06610426.32130-0.787005.916705.02150HepG2HNRNPA1
TBCELENSG00000154114.8381.62680546.65550-0.518503.292002.53180HepG2HNRNPK
TBCELENSG00000154114.8321.41090471.06750-0.551504.912004.12410HepG2HNRNPU
TBCELENSG00000154114.8704.29150548.940500.359401.939001.36480HepG2IGF2BP2
TBCELENSG00000154114.8751.66460582.265300.368302.089301.51660HepG2MAGOH
TBCELENSG00000154114.8402.93200585.54550-0.539203.137002.46860HepG2MATR3
TBCELENSG00000154114.8561.12780396.242300.501802.199201.34170HepG2MTPAP
TBCELENSG00000154114.8729.18140552.609400.399903.701503.02100HepG2PCBP1
TBCELENSG00000154114.8209.10560310.04280-0.568202.521401.74930HepG2PRPF8
TBCELENSG00000154114.8792.21200609.013200.379302.918302.27950HepG2QKI
TBCELENSG00000154114.8263.36370422.15580-0.680704.026402.74510HepG2RCC2
TBCELENSG00000154114.8480.85940625.77940-0.380002.993802.43530HepG2NELFE
TBCELENSG00000154114.8614.38020400.358200.617703.679302.75690HepG2RPS3A
TBCELENSG00000154114.8464.63400306.699500.599203.464702.59890HepG2RRP9
TBCELENSG00000154114.8305.82400419.50710-0.456003.402702.70130HepG2SAFB2
TBCELENSG00000154114.8232.37790463.44510-0.995903.012301.63240HepG2SNRNP200
TBCELENSG00000154114.8801.74680427.937800.905606.334505.13900HepG2SNRNP70
TBCELENSG00000154114.8918.92960749.422600.294102.700402.20250HepG2SRFBP1
TBCELENSG00000154114.8392.48440608.63210-0.632907.435606.47670HepG2SRSF5
TBCELENSG00000154114.8460.75400650.67300-0.497905.251804.58920HepG2SSB
TBCELENSG00000154114.8583.65370692.20980-0.246101.965101.42380HepG2SUCLG1
TBCELENSG00000154114.8531.43440400.067100.409501.989401.40200HepG2SUPV3L1
TBCELENSG00000154114.8680.31470549.192200.308802.075701.57700HepG2TAF15
TBCELENSG00000154114.8252.22270457.73410-0.859808.584807.79260HepG2TIAL1
TBCELENSG00000154114.8335.58200461.82160-0.460703.781703.14470HepG2TRIM56
TBCELENSG00000154114.8780.71590602.211400.374402.615201.76720HepG2TUFM
TBCELENSG00000154114.8532.88390382.969300.476502.894902.25300HepG2U2AF1
TBCELENSG00000154114.8260.07170393.82200-0.598603.084202.31910HepG2XRN2
TBCELENSG00000154114.8249.57670144.061000.792704.260702.72040K562ABCF1
TBCELENSG00000154114.8144.09730206.92460-0.522102.234201.71520K562AGGF1
TBCELENSG00000154114.8152.23950215.31100-0.500102.053201.48800K562AKAP8L
TBCELENSG00000154114.8343.91190174.306700.980306.890006.03140K562AQR
TBCELENSG00000154114.8229.77790133.896400.779002.979201.87040K562CNOT7
TBCELENSG00000154114.8234.58400140.297400.741504.612203.79890K562DDX47
TBCELENSG00000154114.871.70000116.07030-0.695002.118001.41450K562EIF3G
TBCELENSG00000154114.8306.79210193.604800.664004.410403.23700K562EIF4G2
TBCELENSG00000154114.8186.78810118.554700.655702.478501.81570K562G3BP2
TBCELENSG00000154114.8155.6487094.334700.722303.050801.92120K562HNRNPA1
TBCELENSG00000154114.8149.9824072.570801.047204.433403.69610K562HNRNPC
TBCELENSG00000154114.823.0988085.19610-1.883006.202504.73310K562HNRNPM
TBCELENSG00000154114.8211.00020104.458201.014206.539505.15630K562HNRNPU
TBCELENSG00000154114.865.3116029.236201.159502.844201.32760K562ILF3
TBCELENSG00000154114.8306.45430206.360900.570402.891401.73150K562MSI2
TBCELENSG00000154114.8291.05700133.168501.127907.639606.25770K562PCBP3
TBCELENSG00000154114.8197.39290102.151200.950304.715103.66930K562POLR2G
TBCELENSG00000154114.846.87620125.93610-1.425807.585906.52180K562PTBP1
TBCELENSG00000154114.8323.87720224.696500.527402.915101.81700K562PUM1
TBCELENSG00000154114.877.50980213.55400-1.462208.730607.81470K562PUS1
TBCELENSG00000154114.8129.68570208.05590-0.682003.321402.68100K562RBM15
TBCELENSG00000154114.8163.0391072.944901.160205.384504.24120K562RPS19
TBCELENSG00000154114.868.09300123.45240-0.858403.113002.36630K562SRSF1
TBCELENSG00000154114.880.48890124.95690-0.634602.030401.41820K562TARDBP
TBCELENSG00000154114.8195.25060121.112900.688902.928001.49370K562TRIP6
TBCELENSG00000154114.8188.42910115.107700.710903.006101.85590K562U2AF1
TBCELENSG00000154114.8200.94120118.819200.757903.620002.69950K562U2AF2
TBCELENSG00000154114.8294.98490206.575600.513902.698601.42600K562WRN
TBCELENSG00000154114.8358.53950196.335500.868707.189505.68400K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TBCEL is not available on ENCORE database.





2 RBPs can affect the splicing of TBCEL :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETBCELENSG00000154114.8chr11+1209436931209437491209306771209307941209574861209576480.276000.000000.00012includedHepG2U2AF2
MXETBCELENSG00000154114.8chr11+1209243381209244411209257601209260171209182361209183761209290531209291800.385000.000860.045261includedHepG2SRSF9

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TBCEL is not avaliable on ENCORE database.