ZNRF2

General Information

Gene Name       : ZNRF2
Gene ID             : ENSG00000180233.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNRF2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNRF2ENSG00000180233.108.137.157.64ENCSR000AEF
HepG2ZNRF2ENSG00000180233.101.915.223.56ENCSR985KAT
K562ZNRF2ENSG00000180233.103.373.703.54ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNRF2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNRF2 RNA is bound by 15 proteins.  







eCLIP assay for ZNRF2 is not avaliable on ENCORE database.





15 proteins are bound to ZNRF2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr73040721130407264+3'-UTR,intron-Distal4.823166.56329K562U2AF2
chr73040564830405737+3'-UTR,5'-UTR,intron-Proximal3.482385.15776HepG2BCLAF1
chr73040720930407267+3'-UTR,intron-Distal5.6275615.60330HepG2U2AF2
chr73040717630407209+3'-UTR,intron-Distal4.961969.44509HepG2U2AF2
chr73040718030407211+3'-UTR,intron-Distal4.066023.06676K562U2AF2
chr73040716930407263+3'-UTR,intron-Distal4.197003.02097K562U2AF1
chr73040679330406882+3'-UTR,intron-Distal3.628574.13343HepG2FUBP3
chr73040730330407378+3'-UTR,intron-Distal,polyA_site4.543495.60990HepG2KHSRP
chr73040202830402073+3'-UTR,5'-UTR,CDS,intron-Proximal4.319363.38968HepG2BCLAF1
chr73040718330407263+3'-UTR,intron-Distal3.378364.23616K562TIA1
chr73040730430407356+3'-UTR,intron-Distal,polyA_site3.834623.31110K562TIA1
chr73032476030324794+5'-UTR5.266235.29846HepG2DDX3X
chr73032452930324586+5'-UTR4.134713.88836HepG2DDX3X
chr73032541130325485+CDS,intron-Proximal3.967234.54206HepG2PRPF8
chr73038008330380168+intron-Distal4.007023.01445K562EXOSC5
chr73033458230334697+intron-Distal5.8217310.00047K562EIF4G2
chr73033590730335994+intron-Distal4.131303.42844K562KHSRP
chr73042979930429915+intron-Distal4.296324.77518HepG2U2AF2
chr73032971430329824+intron-Distal3.765045.32884K562KHSRP
chr73044144130441550+intron-Distal4.0023610.00855HepG2PCBP2
chr73040905830409149+intron-Distal3.723513.25538K562KHSRP
chr73041105130411117+intron-Distal4.005576.66613K562PUM2
chr73044792930448114+intron-Distal4.319193.27829HepG2MATR3
chr73043442330434524+intron-Distal4.135154.62831HepG2PCBP2
chr73044144130441540+intron-Distal3.667128.26814HepG2PTBP1
chr73036536830365536+intron-Distal3.125203.48890K562KHSRP
chr73043451130434591+intron-Distal5.8560013.19203HepG2QKI
chr73038236630382456+intron-Distal4.304824.48623K562EXOSC5
chr73041104930411113+intron-Distal4.131917.69621K562KHSRP
chr73041094630411060+intron-Distal4.700886.18899HepG2KHSRP
chr73045036730450452+intron-Distal5.6924411.11632HepG2QKI
chr73041099730411049+intron-Distal4.531156.58261K562KHSRP
chr73033469730334772+intron-Distal4.8444110.02297K562EIF4G2
chr73043442030434519+intron-Distal4.2987211.97743HepG2PTBP1
chr73042555630425676+intron-Distal3.259313.56114HepG2KHSRP
chr73044145130441550+intron-Distal5.720768.42544K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNRF2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNRF2 is not available on ENCORE database.

  • 39 RBPs can affect the levels of ZNRF2.  








The Knockdown/knockout RNA-Seq assay for ZNRF2 is not available on ENCORE database.





39 RBPs can affect the gene expression of ZNRF2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNRF2ENSG00000180233.9183.48430313.80720-0.774203.881003.26680HepG2AKAP1
ZNRF2ENSG00000180233.9101.32920213.91500-1.078005.944604.45090HepG2AKAP8
ZNRF2ENSG00000180233.9340.13620255.037100.415301.977501.31680HepG2CALR
ZNRF2ENSG00000180233.9100.51500173.48820-0.787403.504002.74850HepG2DDX21
ZNRF2ENSG00000180233.9107.66950183.04730-0.765602.661701.90030HepG2DDX55
ZNRF2ENSG00000180233.9160.26660258.20500-0.688003.003102.36180HepG2DDX6
ZNRF2ENSG00000180233.9149.76040211.67490-0.499202.514101.88660HepG2DNAJC2
ZNRF2ENSG00000180233.9493.43620357.996800.462803.602802.93100HepG2ETF1
ZNRF2ENSG00000180233.9186.57840304.05360-0.704503.666502.78840HepG2FIP1L1
ZNRF2ENSG00000180233.9431.43180278.292300.632403.643202.91710HepG2GPKOW
ZNRF2ENSG00000180233.9165.99510239.81620-0.530802.098001.48410HepG2HNRNPC
ZNRF2ENSG00000180233.9373.49380265.579800.491802.444301.84750HepG2HNRNPLL
ZNRF2ENSG00000180233.9104.47830238.23050-1.1892010.282809.17620HepG2HNRNPU
ZNRF2ENSG00000180233.9146.16600261.46720-0.839005.964905.12710HepG2PCBP1
ZNRF2ENSG00000180233.9263.54680182.981300.526302.667501.90600HepG2PRPF4
ZNRF2ENSG00000180233.9356.21060263.022200.437402.285301.67360HepG2PUM2
ZNRF2ENSG00000180233.9229.08960299.21990-0.385301.812601.37000HepG2RBM22
ZNRF2ENSG00000180233.9183.76450247.40380-0.429002.194401.61090HepG2SMN1
ZNRF2ENSG00000180233.9236.34200337.95930-0.516003.343902.80940HepG2SRFBP1
ZNRF2ENSG00000180233.9473.46520289.122600.711506.645505.98950HepG2SRSF1
ZNRF2ENSG00000180233.9151.66230210.65130-0.474002.021301.41570HepG2SRSF7
ZNRF2ENSG00000180233.9397.63770278.426800.514103.799603.09180HepG2SUCLG1
ZNRF2ENSG00000180233.9142.07930233.55540-0.717104.684503.98960HepG2TRIM56
ZNRF2ENSG00000180233.9385.77630260.097000.568602.924202.27940HepG2U2AF1
ZNRF2ENSG00000180233.963.38400107.64720-0.764102.290801.59950HepG2UCHL5
ZNRF2ENSG00000180233.9208.44540308.92010-0.567603.612302.97950K562AGGF1
ZNRF2ENSG00000180233.9168.34360339.41570-1.011608.893206.85620K562AKAP8
ZNRF2ENSG00000180233.9239.05290321.43540-0.427202.163601.58310K562AKAP8L
ZNRF2ENSG00000180233.9218.31490129.624000.752003.167702.05520K562EIF3D
ZNRF2ENSG00000180233.999.10520185.09790-0.901304.505602.79090K562EWSR1
ZNRF2ENSG00000180233.9170.74810278.11910-0.703804.029302.99260K562FIP1L1
ZNRF2ENSG00000180233.9305.80970219.546100.478001.916501.33980K562G3BP2
ZNRF2ENSG00000180233.9220.60240311.80590-0.499202.696501.65690K562HNRNPL
ZNRF2ENSG00000180233.9130.42280193.52570-0.569302.521001.66710K562HNRNPU
ZNRF2ENSG00000180233.999.55900209.01950-1.070005.587603.29280K562NUSAP1
ZNRF2ENSG00000180233.9130.55530207.22610-0.666502.993001.50150K562PHF6
ZNRF2ENSG00000180233.9228.13630315.71120-0.468702.421701.65710K562PPIG
ZNRF2ENSG00000180233.9102.76780190.28860-0.888804.346803.17380K562PSIP1
ZNRF2ENSG00000180233.9233.82100318.84760-0.447501.960501.48860K562PUS1
ZNRF2ENSG00000180233.9226.25440310.60940-0.457202.510801.94150K562RBM15
ZNRF2ENSG00000180233.9184.60020120.010100.621102.127201.41540K562RPS19
ZNRF2ENSG00000180233.9129.94190194.50180-0.581902.207301.37620K562TRIM56
ZNRF2ENSG00000180233.9148.55050269.65310-0.860206.695805.63150K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNRF2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ZNRF2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ZNRF2 is not avaliable on ENCORE database.