DDX18

General Information

Gene Name       : DDX18
Gene ID             : ENSG00000088205.12
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: DDX18)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DDX18ENSG00000088205.1274.9069.1272.01ENCSR000AEF
HepG2DDX18ENSG00000088205.1266.84113.1890.01ENCSR985KAT
K562DDX18ENSG00000088205.1290.48104.6297.55ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq DDX18-BGKcLV28-K562ENCSR300LXODDX18K562ReleasedENCSR220DTX   CRISPRKD% = 83.6,83.8
knockdown followed by RNA-seq DDX18-BGHcLV29-HepG2ENCSR992YRLDDX18HepG2ReleasedENCSR462MFN   CRISPRKD% = 77.0,84.5






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
DDX18ENCAB781GEVA300-636A1Released, ENCODE4BGHcLV29-71, Released, ENCODE4BGKcLV28-71, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
DDX18K562CRISPRENCSR300LXOENCSR220DTXDDX18-BGKcLV28-71,DDX18-BGKcLV28-72NT-BGKcLV28-1,NT-BGKcLV28-283.6,83.8ReleasedENCODE4
DDX18HepG2CRISPRENCSR992YRLENCSR462MFNDDX18-BGHcLV29-71,DDX18-BGHcLV29-72NT-BGHcLV29-1,NT-BGHcLV29-277.0,84.5ReleasedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
DDX18Product_ID: A300-636A
Lot_ID: 1
Source: Bethyl Labs
Target Name: DDX18-human		 DDX18-HEPG2CRISPR-A300-636A.png<br>Caption: Western blot following CRISPR against DDX18 in HepG2 whole cell lysate using DDX18 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against DDX18. DDX18 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
 Bethyl_A300-636A_1_DDX18.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the DDX18 specific antibody, A300-636A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the DDX18-specific antibody, A300-636A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 DDX18-K562-CRISPR-A300-636A.png<br>Caption: Western blot following CRISPR against DDX18 in K562 whole cell lysate using DDX18 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against DDX18. DDX18 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for DDX18 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DDX18 RNA is bound by 28 proteins.  







eCLIP assay for DDX18 is not avaliable on ENCORE database.





28 proteins are bound to DDX18 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2118589571118589648+3'-UTR3.247365.58482K562YBX3
chr2118588482118588495+3'-UTR3.021734.51177K562YBX3
chr2118588449118588463+3'-UTR3.804554.74241K562YBX3
chr2118588620118588689+3'-UTR4.420983.84520HepG2TIA1
chr2118588463118588477+3'-UTR3.977938.70833K562YBX3
chr2118588498118588557+3'-UTR5.501967.22380HepG2SUB1
chr2118588354118588434+3'-UTR3.530784.48983K562TIA1
chr2118572278118572332+5'-UTR3.388955.17928K562YBX3
chr2118572300118572398+5'-UTR,CDS3.4822112.27023HepG2GRWD1
chr2118572329118572439+5'-UTR,CDS,intron-Proximal3.4913725.42358K562ZNF622
chr2118572332118572383+5'-UTR,CDS3.9269116.39160K562YBX3
chr2118572267118572432+5'-UTR,CDS3.128948.72545K562DDX3X
chr2118572338118572437+5'-UTR,CDS3.5030814.75988HepG2BCLAF1
chr2118579237118579292+CDS3.799813.60954K562PUM1
chr2118579437118579555+CDS,intron-Proximal3.8103110.86716K562ZNF622
chr2118582601118582677+CDS3.274328.81470HepG2GRWD1
chr2118577222118577292+CDS,intron-Proximal3.266207.55782K562ZNF622
chr2118579618118579629+CDS4.799319.61639HepG2PRPF8
chr2118579719118579744+CDS,intron-Proximal3.875688.08603HepG2BCLAF1
chr2118582562118582579+CDS,intron-Proximal3.673844.17155HepG2BCLAF1
chr2118583950118584069+CDS,intron-Distal,intron-Proximal4.054959.79046K562PRPF8
chr2118579289118579326+CDS3.793479.50935HepG2BCLAF1
chr2118577289118577369+CDS,intron-Proximal3.023787.67344K562PUM1
chr2118583158118583226+CDS,intron-Proximal4.107184.69071HepG2GRWD1
chr2118577310118577371+CDS,intron-Proximal3.9633014.13437K562UCHL5
chr2118582152118582197+CDS3.169416.59678HepG2BCLAF1
chr2118572384118572479+CDS,intron-Proximal4.7579012.79935HepG2PRPF8
chr2118575264118575304+CDS3.343144.89070K562UCHL5
chr2118579477118579574+CDS3.9577814.30125HepG2BCLAF1
chr2118583850118583905+CDS3.309687.66871HepG2BCLAF1
chr2118579524118579640+CDS,intron-Proximal3.186273.47697K562MTPAP
chr2118572391118572448+CDS,intron-Proximal3.167303.06445HepG2EIF3D
chr2118582197118582286+CDS,intron-Proximal4.1380816.85893HepG2BCLAF1
chr2118577223118577310+CDS,intron-Proximal3.8214011.49349K562UCHL5
chr2118583021118583052+CDS,intron-Proximal3.365275.79905HepG2BCLAF1
chr2118579659118579767+CDS,intron-Proximal3.865835.34520K562EFTUD2
chr2118579581118579638+CDS,intron-Proximal3.710289.41377HepG2GRWD1
chr2118579591118579641+CDS,intron-Proximal3.314885.11643K562ZNF622
chr2118577298118577371+CDS,intron-Proximal4.3949716.95425HepG2BCLAF1
chr2118579759118579850+CDS,intron-Proximal3.4714914.17599HepG2BCLAF1
chr2118579776118579808+CDS4.764314.78571K562UCHL5
chr2118575018118575080+CDS,intron-Proximal3.786197.35414K562ZNF622
chr2118582654118582678+CDS,intron-Proximal3.198864.61799HepG2BCLAF1
chr2118575004118575084+CDS,intron-Proximal3.007155.68089HepG2BUD13
chr2118575285118575304+CDS3.457365.56491HepG2BCLAF1
chr2118579529118579634+CDS3.621374.28265HepG2FXR2
chr2118579829118579876+CDS,intron-Proximal3.911553.71591HepG2PRPF8
chr2118579495118579580+CDS4.469153.68241HepG2G3BP1
chr2118575182118575248+CDS3.591528.50755HepG2BCLAF1
chr2118578736118578869+CDS,intron-Proximal3.854418.93855HepG2ZNF800
chr2118575016118575043+CDS,intron-Proximal4.028924.40383K562UCHL5
chr2118578736118578816+CDS,intron-Proximal3.636395.36496K562ZNF800
chr2118578755118578808+CDS3.802386.39499HepG2GRWD1
chr2118578865118578934+CDS,intron-Proximal3.916114.98250K562AQR
chr2118572398118572440+CDS,intron-Proximal3.9872011.31198HepG2GRWD1
chr2118579574118579639+CDS,intron-Proximal3.9499513.10875HepG2BCLAF1
chr2118582145118582263+CDS4.6090711.10249K562UCHL5
chr2118578735118578797+CDS,intron-Proximal3.095057.04888K562UCHL5
chr2118572391118572440+CDS,intron-Proximal3.482364.49816K562UCHL5
chr2118583034118583143+CDS3.602518.85042HepG2GRWD1
chr2118575080118575152+CDS3.887075.80935K562ZNF622
chr2118575103118575182+CDS4.9433311.13876HepG2BCLAF1
chr2118575029118575103+CDS4.7765016.44959HepG2BCLAF1
chr2118583855118583948+CDS3.203675.80517HepG2GRWD1
chr2118578735118578819+CDS,intron-Proximal4.2914515.85384HepG2BCLAF1
chr2118575098118575186+CDS3.457336.39282HepG2GRWD1
chr2118572430118572495+CDS,intron-Proximal4.056136.35873K562PRPF8
chr2118577304118577373+CDS,intron-Proximal3.130356.85184K562GRWD1
chr2118579574118579637+CDS4.7325110.01989K562UCHL5
chr2118575225118575316+CDS,intron-Proximal3.239763.96619HepG2AQR
chr2118579629118579676+CDS,intron-Proximal4.3116416.17387HepG2PRPF8
chr2118579592118579638+CDS,intron-Proximal4.266954.25741HepG2G3BP1
chr2118578736118578776+CDS,intron-Proximal3.335675.23038K562ZNF622
chr2118582204118582284+CDS3.105246.27353HepG2GRWD1
chr2118578819118578875+CDS,intron-Proximal3.924377.28307HepG2BCLAF1
chr2118577251118577301+CDS4.348783.56019HepG2GRWD1
chr2118577210118577376+CDS,intron-Proximal3.119739.82443HepG2AQR
chr2118577224118577298+CDS,intron-Proximal4.0527712.56108HepG2BCLAF1
chr2118575019118575098+CDS,intron-Proximal3.174834.87903HepG2GRWD1
chr2118577224118577289+CDS,intron-Proximal3.644595.93018K562PUM1
chr2118579435118579477+CDS,intron-Proximal3.600669.83277HepG2BCLAF1
chr2118577275118577369+CDS,intron-Proximal3.288414.84290HepG2HLTF
chr2118577292118577372+CDS,intron-Proximal5.1398416.43851K562ZNF622
chr2118579850118579960+intron-Distal,intron-Proximal3.362206.27473HepG2KHSRP
chr2118584458118584521+intron-Distal4.504283.18981K562PTBP1
chr2118580775118580808+intron-Distal3.892643.91876HepG2U2AF2
chr2118580355118580430+intron-Distal4.693937.70131HepG2PCBP2
chr2118580373118580426+intron-Distal3.401626.92010HepG2U2AF2
chr2118580216118580322+intron-Distal3.988778.17387K562KHSRP
chr2118579094118579181+intron-Distal,intron-Proximal3.168894.79074K562KHSRP
chr2118580399118580496+intron-Distal4.917297.82495HepG2KHSRP
chr2118583632118583752+intron-Distal,intron-Proximal3.214066.46423HepG2HNRNPC
chr2118584326118584384+intron-Distal3.565455.44142HepG2PCBP2
chr2118584230118584365+intron-Distal3.895737.32475HepG2PTBP1
chr2118579907118579994+intron-Distal,intron-Proximal5.3328510.31535HepG2QKI
chr2118580432118580485+intron-Distal3.970643.97489K562TIA1
chr2118580989118581110+intron-Distal3.111634.30735HepG2HNRNPL
chr2118582030118582102+intron-Distal,intron-Proximal3.431834.13620K562KHSRP
chr2118584170118584255+intron-Distal5.203496.97910HepG2PCBP2
chr2118580407118580508+intron-Distal3.327469.37731K562KHSRP
chr2118584446118584507+intron-Distal4.071617.28796HepG2PTBP1
chr2118584338118584381+intron-Distal3.524603.27944K562PTBP1
chr2118580359118580443+intron-Distal5.256258.66262HepG2U2AF1
chr2118584498118584577+intron-Distal3.097584.40773HepG2SUGP2
chr2118579842118579971+intron-Distal,intron-Proximal4.347989.70733K562KHSRP
chr2118586088118586152+intron-Distal3.414774.08528HepG2SUGP2
chr2118587042118587132+intron-Proximal3.888894.89208K562AQR
chr2118582294118582354+intron-Proximal3.189043.93901K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DDX18 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DDX18 is not available on ENCORE database.

  • 100 RBPs can affect the levels of DDX18.  








The Knockdown/knockout RNA-Seq assay for DDX18 is not available on ENCORE database.





100 RBPs can affect the gene expression of DDX18 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DDX18ENSG00000088205.85282.494903234.339600.707608.404507.53280HepG2AKAP1
DDX18ENSG00000088205.83316.080604012.49390-0.275004.185503.37410HepG2AUH
DDX18ENSG00000088205.82228.180603047.02790-0.451502.961901.98860HepG2BCCIP
DDX18ENSG00000088205.81671.983802647.91290-0.663305.953304.69060HepG2BCLAF1
DDX18ENSG00000088205.82132.682603659.89660-0.779102.969901.95800HepG2CCAR1
DDX18ENSG00000088205.81680.203802292.30580-0.448204.568503.70390HepG2CPSF6
DDX18ENSG00000088205.81975.760902427.07530-0.296802.078301.48100HepG2DDX21
DDX18ENSG00000088205.81849.534202803.37130-0.600004.468302.88650HepG2DDX27
DDX18ENSG00000088205.82230.950103098.47820-0.473903.277802.60430HepG2DDX3X
DDX18ENSG00000088205.82066.854702661.12570-0.364602.392601.81460HepG2DDX6
DDX18ENSG00000088205.82027.990402455.60740-0.276003.706302.94410HepG2DKC1
DDX18ENSG00000088205.81756.526402487.79800-0.502109.456108.21750HepG2DNAJC21
DDX18ENSG00000088205.81564.277102465.75200-0.6565022.4647020.76860HepG2DNAJC2
DDX18ENSG00000088205.81545.440602558.73190-0.727406.567005.67700HepG2EIF2S1
DDX18ENSG00000088205.81934.449502752.92390-0.509003.502302.73260HepG2EIF4B
DDX18ENSG00000088205.84315.871303767.297300.196002.230801.46480HepG2EIF4G1
DDX18ENSG00000088205.82616.608703608.78440-0.463805.139104.04900HepG2EIF4G2
DDX18ENSG00000088205.81895.069301319.059600.522604.929303.89480HepG2FUBP3
DDX18ENSG00000088205.81920.668502646.53270-0.462503.136702.42980HepG2G3BP1
DDX18ENSG00000088205.81845.365002652.28750-0.523304.802903.45700HepG2GNB2L1
DDX18ENSG00000088205.81567.234502598.52110-0.729508.794007.69570HepG2GPKOW
DDX18ENSG00000088205.81717.232502511.63100-0.548507.694006.69880HepG2HNRNPA1
DDX18ENSG00000088205.82236.270302793.69920-0.321102.964602.25000HepG2HNRNPC
DDX18ENSG00000088205.82016.329303007.08860-0.5766014.4885013.02150HepG2HNRNPF
DDX18ENSG00000088205.83103.883003478.14390-0.164202.190101.58010HepG2HNRNPL
DDX18ENSG00000088205.82371.947502775.23080-0.226502.922602.30120HepG2HNRNPU
DDX18ENSG00000088205.81962.784602961.13340-0.5932010.452509.13110HepG2IGF2BP1
DDX18ENSG00000088205.81958.834702834.81090-0.5333017.7713016.09730HepG2ILF2
DDX18ENSG00000088205.82074.820402346.24750-0.177402.224501.30780HepG2KIF1C
DDX18ENSG00000088205.84860.035702869.604700.760009.887708.75170HepG2MATR3
DDX18ENSG00000088205.81808.199502937.30190-0.699906.572705.61560HepG2NCBP2
DDX18ENSG00000088205.82649.190903786.29240-0.515209.482408.09650HepG2NOL12
DDX18ENSG00000088205.81822.940802198.82040-0.270502.049601.40150HepG2NSUN2
DDX18ENSG00000088205.83372.674602549.022000.403808.287507.33060HepG2PCBP1
DDX18ENSG00000088205.81773.815802475.28870-0.480708.503707.25960HepG2PPIL4
DDX18ENSG00000088205.82713.110403614.42840-0.413804.899004.13290HepG2PUF60
DDX18ENSG00000088205.84416.393103836.970100.202803.915003.23630HepG2PUM1
DDX18ENSG00000088205.82030.582902614.32320-0.364507.039006.13390HepG2PUS1
DDX18ENSG00000088205.83400.218702809.096200.275402.385701.79860HepG2QKI
DDX18ENSG00000088205.84541.760402798.749100.698404.671503.76870HepG2RAVER1
DDX18ENSG00000088205.84619.525403850.401200.262603.502402.93850HepG2RBM22
DDX18ENSG00000088205.81550.362302544.08180-0.714508.412706.57360HepG2RCC2
DDX18ENSG00000088205.82382.501803239.22790-0.443205.229704.32920HepG2RPLP0
DDX18ENSG00000088205.82765.165202286.881800.273902.026401.34340HepG2RRP9
DDX18ENSG00000088205.82083.045102471.48100-0.246703.644402.92320HepG2SAFB2
DDX18ENSG00000088205.82681.604002030.451800.401202.614701.34010HepG2SART3
DDX18ENSG00000088205.83851.815702754.963700.483403.276002.54090HepG2SF3A3
DDX18ENSG00000088205.82192.407602882.19030-0.3946010.316709.20330HepG2SMN1
DDX18ENSG00000088205.84813.324004348.944000.146302.003201.55610HepG2SRFBP1
DDX18ENSG00000088205.85239.050602818.637200.8942044.4406043.04660HepG2SRSF1
DDX18ENSG00000088205.82035.581402954.33210-0.5374012.6783011.37630HepG2SRSF7
DDX18ENSG00000088205.82876.816002293.094800.327105.784905.03820HepG2SRSF9
DDX18ENSG00000088205.83153.838803776.01360-0.259803.818203.23720HepG2SSB
DDX18ENSG00000088205.82314.575702982.41940-0.365702.129201.52550HepG2SUPV3L1
DDX18ENSG00000088205.82018.604002533.44730-0.327704.489303.80140HepG2TAF15
DDX18ENSG00000088205.81411.099202417.01520-0.7764012.3295010.96430HepG2TARDBP
DDX18ENSG00000088205.81657.772802696.75240-0.7020015.0758014.07350HepG2TIAL1
DDX18ENSG00000088205.81981.588402720.75520-0.4573010.046509.07450HepG2TRIM56
DDX18ENSG00000088205.82002.364302443.22900-0.287104.414803.56760HepG2UPF1
DDX18ENSG00000088205.81709.791202731.59650-0.675904.790403.45360HepG2UPF2
DDX18ENSG00000088205.82966.565002358.845500.330605.876105.05820HepG2UTP3
DDX18ENSG00000088205.81860.861202935.85780-0.657805.683304.65690HepG2XRN2
DDX18ENSG00000088205.83403.698204059.09990-0.254103.049601.65840K562BCCIP
DDX18ENSG00000088205.82823.386603922.63050-0.4744012.4172010.36200K562BCLAF1
DDX18ENSG00000088205.82383.968203056.28990-0.358403.074002.15190K562BOP1
DDX18ENSG00000088205.8938.595801461.82240-0.639207.426705.47870K562CCAR1
DDX18ENSG00000088205.83097.618403793.98120-0.292602.527001.30560K562CIRBP
DDX18ENSG00000088205.83846.810704799.84970-0.319302.310401.30850K562CPEB4
DDX18ENSG00000088205.82311.944203249.77590-0.491207.404506.11600K562CPSF6
DDX18ENSG00000088205.82513.461102975.90000-0.243702.828201.76000K562CSTF2
DDX18ENSG00000088205.83177.909803737.89200-0.234103.093201.80770K562DDX21
DDX18ENSG00000088205.82961.446303439.30930-0.215802.710701.40230K562DDX27
DDX18ENSG00000088205.81852.433902401.86660-0.374704.170402.85330K562DDX3X
DDX18ENSG00000088205.87014.398104967.468800.4977014.2797012.91370K562DDX47
DDX18ENSG00000088205.82068.775102638.16490-0.350805.688803.92790K562EIF2S1
DDX18ENSG00000088205.83584.236705384.20760-0.5871015.3887013.89900K562EIF2S2
DDX18ENSG00000088205.84488.731503127.077800.521403.839602.91170K562EIF3G
DDX18ENSG00000088205.81664.810202259.75860-0.440805.380703.69350K562EIF4B
DDX18ENSG00000088205.82255.403702786.95730-0.305303.047101.71580K562EXOSC5
DDX18ENSG00000088205.83610.251204469.69740-0.308102.826801.96830K562FIP1L1
DDX18ENSG00000088205.82249.174103306.44820-0.555907.093205.69420K562FMR1
DDX18ENSG00000088205.82183.933902802.46030-0.359802.928401.98670K562FTO
DDX18ENSG00000088205.84307.555202609.591100.7229022.4002020.79600K562FXR1
DDX18ENSG00000088205.83858.954402906.532500.408802.719802.02010K562G3BP2
DDX18ENSG00000088205.82347.356403102.78650-0.402504.479703.47450K562GPKOW
DDX18ENSG00000088205.86005.800507175.42050-0.256702.503401.78180K562GRSF1
DDX18ENSG00000088205.81950.039402859.30810-0.552202.968002.35310K562HNRNPC
DDX18ENSG00000088205.85492.141403535.622400.635308.110105.92230K562HNRNPK
DDX18ENSG00000088205.84166.622206059.85310-0.540407.393406.10920K562HSPD1
DDX18ENSG00000088205.82193.454302779.42470-0.341603.450602.20810K562MAK16
DDX18ENSG00000088205.84368.759503712.831600.234602.112501.31570K562MATR3
DDX18ENSG00000088205.82324.565903028.64470-0.381704.348003.23280K562METAP2
DDX18ENSG00000088205.83303.414104095.76410-0.310208.715907.49540K562NSUN2
DDX18ENSG00000088205.82867.690903545.00390-0.305902.224001.47880K562PCBP3
DDX18ENSG00000088205.84104.027505074.10140-0.306102.712501.90160K562PPIG
DDX18ENSG00000088205.82027.129203292.36780-0.699703.065501.50820K562PPP1R8
DDX18ENSG00000088205.84074.302303159.511100.366802.239601.56100K562PRPF8
DDX18ENSG00000088205.81605.009502563.48020-0.675503.911402.80800K562PSIP1
DDX18ENSG00000088205.86973.061808408.67460-0.270102.555001.63080K562PUM2
DDX18ENSG00000088205.81174.876802337.93260-0.992707.655006.00130K562RCC2
DDX18ENSG00000088205.82940.086802422.694100.279102.526001.49290K562SAFB
DDX18ENSG00000088205.82334.822702950.67700-0.337702.399801.49900K562SF3B1
DDX18ENSG00000088205.82754.065304140.47640-0.5882022.0962019.85300K562SRPK2
DDX18ENSG00000088205.84272.043703543.394100.269702.775202.06770K562SRSF1
DDX18ENSG00000088205.81442.266201949.37700-0.434704.889003.42490K562SRSF4
DDX18ENSG00000088205.82473.033003346.38410-0.436304.790103.34050K562SRSF5
DDX18ENSG00000088205.82587.394903335.75410-0.366506.197104.43460K562SRSF7
DDX18ENSG00000088205.84282.146505363.69180-0.324902.609801.40140K562STAU1
DDX18ENSG00000088205.84194.856902727.346200.6210012.8885011.12620K562SYNCRIP
DDX18ENSG00000088205.82756.571503586.21960-0.379603.524702.72290K562TARDBP
DDX18ENSG00000088205.82698.968003459.29440-0.358104.267303.21830K562TIA1
DDX18ENSG00000088205.81730.759702465.74970-0.510602.685101.76490K562TIAL1
DDX18ENSG00000088205.82683.181903394.42230-0.339203.253502.05230K562TRA2A
DDX18ENSG00000088205.81910.051102618.52360-0.455102.391101.52120K562TRIM56
DDX18ENSG00000088205.83560.027102910.650800.290403.294502.41960K562U2AF2
DDX18ENSG00000088205.82980.798404342.82070-0.5429015.7777014.22790K562UPF1
DDX18ENSG00000088205.82889.469803716.02240-0.363004.273503.17610K562WDR3
DDX18ENSG00000088205.84630.073003864.178100.260804.881903.78680K562WDR43
DDX18ENSG00000088205.85067.998107403.32820-0.546805.139203.37960K562WRN
DDX18ENSG00000088205.84149.549302701.909900.618903.243201.49750K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DDX18 is not available on ENCORE database.





11 RBPs can affect the splicing of DDX18 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDDX18ENSG00000088205.8chr2+118586524118586581118583844118583958118586864118587042-0.062000.000180.00503excludedK562SF3B4
SEDDX18ENSG00000088205.8chr2+1185803281185804211185797221185798371185821441185822840.634000.000000.00000includedHepG2U2AF1
SEDDX18ENSG00000088205.8chr2+1185803281185804211185797221185798371185821441185822840.073000.000020.00413includedHepG2TBRG4
SEDDX18ENSG00000088205.8chr2+1185803281185804211185797221185798371185821441185822840.083000.000000.00000includedHepG2U2AF2
SEDDX18ENSG00000088205.8chr2+1185803281185804211185797221185798371185821441185822840.155000.000000.00000includedHepG2SFPQ
SEDDX18ENSG00000088205.8chr2+1185803281185804211185797221185798371185821441185822840.055000.000000.00000includedK562U2AF1
SEDDX18ENSG00000088205.8chr2+1185803281185804211185797221185798371185821441185822840.060000.000020.00535includedHepG2PCBP2
SEDDX18ENSG00000088205.8chr2+1185803281185804211185797221185798371185821441185822840.058000.000250.00995includedHepG2SF3A3
SEDDX18ENSG00000088205.8chr2+118586524118586581118583844118583958118586864118587020-0.055000.000400.01833excludedK562TARDBP
SEDDX18ENSG00000088205.8chr2+118586524118586581118583844118583958118586864118587042-0.194000.000030.00211excludedK562SF3B1
SEDDX18ENSG00000088205.8chr2+1185803281185804211185797221185798371185821441185822840.101000.000000.00065includedK562SAFB
A3SSDDX18ENSG00000088205.8chr2+118582515118582677118582572118582677118582189118582284-0.190000.000090.00371shorterHepG2U2AF2
A3SSDDX18ENSG00000088205.8chr2+1185824321185826771185825721185826771185821001185822840.271000.000090.00079longerK562AQR
A3SSDDX18ENSG00000088205.8chr2+1185794131185796371185794371185796371185791561185793260.152000.000000.00000longerK562AQR
A3SSDDX18ENSG00000088205.8chr2+118582515118582677118582572118582677118582189118582284-0.248000.000190.01006shorterHepG2U2AF1
A3SSDDX18ENSG00000088205.8chr2+118582515118582612118582572118582612118582189118582284-0.169000.000260.01565shorterK562U2AF1
A5SSDDX18ENSG00000088205.8chr2+1185830641185832711185830641185831751185838441185870420.131000.000000.00000longerK562AQR
RIDDX18ENSG00000088205.8chr2+118579722118580356118579722118579837118580328118580356-0.438000.000010.00013excludedHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DDX18 is not avaliable on ENCORE database.