WASF3

General Information

Gene Name       : WASF3
Gene ID             : ENSG00000132970.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: WASF3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878WASF3ENSG00000132970.120.000.000.00ENCSR000AEF
HepG2WASF3ENSG00000132970.128.9713.7111.34ENCSR985KAT
K562WASF3ENSG00000132970.120.060.080.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WASF3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • WASF3 RNA is bound by 6 proteins.  







eCLIP assay for WASF3 is not avaliable on ENCORE database.





6 proteins are bound to WASF3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr132726155227261647+3'-UTR5.5905312.06635HepG2LIN28B
chr132726082227260882+3'-UTR4.807316.37354HepG2LIN28B
chr132713186227131959+5'-UTR,intron-Proximal3.894547.12467HepG2DDX3X
chr132725064327250715+CDS,intron-Distal,intron-Proximal3.492833.80334HepG2U2AF2
chr132723063727230739+intron-Distal4.613525.85495HepG2QKI
chr132715278427152861+intron-Distal4.579525.41525HepG2PCBP2
chr132725317627253260+intron-Distal5.518189.83211HepG2PCBP2
chr132725310627253176+intron-Distal3.856158.47057HepG2PCBP2
chr132725342027253497+intron-Distal4.073324.07750HepG2HNRNPK
chr132725338827253494+intron-Distal5.079525.77028HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WASF3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WASF3 is not available on ENCORE database.

  • 73 RBPs can affect the levels of WASF3.  








The Knockdown/knockout RNA-Seq assay for WASF3 is not available on ENCORE database.





73 RBPs can affect the gene expression of WASF3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WASF3ENSG00000132970.8663.30080890.57620-0.425102.840601.88740HepG2ABCF1
WASF3ENSG00000132970.8516.672101005.73600-0.960909.975809.03200HepG2AKAP1
WASF3ENSG00000132970.8427.37460638.48940-0.579203.690502.49850HepG2AKAP8
WASF3ENSG00000132970.8921.856001099.49890-0.254202.153201.53410HepG2AUH
WASF3ENSG00000132970.8416.53050734.62350-0.818606.315704.87320HepG2BCCIP
WASF3ENSG00000132970.8543.87650714.29970-0.393302.565501.98660HepG2BOP1
WASF3ENSG00000132970.8881.525201220.26300-0.469102.903501.90420HepG2CCAR1
WASF3ENSG00000132970.81142.82370790.600700.531504.571103.59040HepG2CIRBP
WASF3ENSG00000132970.8466.51920655.77110-0.491303.254202.51430HepG2CPSF6
WASF3ENSG00000132970.8566.27050742.58420-0.391103.360802.23950HepG2YBX3
WASF3ENSG00000132970.8742.88860980.07940-0.399804.271903.50500HepG2CELF1
WASF3ENSG00000132970.8371.65230675.85550-0.862806.307404.45290HepG2DDX27
WASF3ENSG00000132970.8650.85300963.38300-0.565804.544203.75680HepG2DDX3X
WASF3ENSG00000132970.8393.49890722.26630-0.876207.168705.99230HepG2DDX55
WASF3ENSG00000132970.8452.21540810.93460-0.842609.601107.85920HepG2DDX5
WASF3ENSG00000132970.8377.41610827.65060-1.1329012.6833011.47490HepG2DDX6
WASF3ENSG00000132970.8489.23050703.26570-0.523604.340103.12270HepG2DHX30
WASF3ENSG00000132970.8444.13290681.75500-0.618307.243006.24400HepG2DKC1
WASF3ENSG00000132970.8454.32870729.14520-0.682508.737707.54360HepG2DNAJC21
WASF3ENSG00000132970.8550.92280722.73110-0.391604.283903.50570HepG2DNAJC2
WASF3ENSG00000132970.8498.36950646.79990-0.376102.655701.59690HepG2EIF3G
WASF3ENSG00000132970.8819.117901039.66530-0.344003.213202.32510HepG2EIF4G1
WASF3ENSG00000132970.8758.83210995.93450-0.392302.865302.03720HepG2EIF4G2
WASF3ENSG00000132970.8903.29440696.303500.375402.986902.12180HepG2EWSR1
WASF3ENSG00000132970.8491.35480652.71170-0.409702.825101.66960HepG2FASTKD2
WASF3ENSG00000132970.8359.49360738.37900-1.0384011.640209.53210HepG2GNB2L1
WASF3ENSG00000132970.8393.78130680.30570-0.7888012.0480010.23180HepG2HDGF
WASF3ENSG00000132970.8522.50140818.81760-0.648106.186905.18150HepG2HNRNPC
WASF3ENSG00000132970.8651.74720833.40070-0.354702.207601.57860HepG2HNRNPK
WASF3ENSG00000132970.8825.15780959.96770-0.218301.962301.38300HepG2HNRNPL
WASF3ENSG00000132970.8538.11440709.42140-0.398702.351401.76610HepG2HNRNPLL
WASF3ENSG00000132970.8563.28600813.40350-0.530106.949906.02570HepG2HNRNPU
WASF3ENSG00000132970.8512.21590742.96740-0.536505.234904.27200HepG2IGF2BP1
WASF3ENSG00000132970.8593.24090836.42560-0.495603.534302.78090HepG2IGF2BP2
WASF3ENSG00000132970.8466.92670892.39850-0.934509.514408.40310HepG2MATR3
WASF3ENSG00000132970.8867.698201044.98160-0.268202.102901.43620HepG2NOL12
WASF3ENSG00000132970.8331.74100619.73670-0.901605.517304.23330HepG2PABPC1
WASF3ENSG00000132970.8628.95490805.12000-0.356203.315502.39610HepG2PARN
WASF3ENSG00000132970.8432.36030654.64410-0.598507.108405.93740HepG2PRPF4
WASF3ENSG00000132970.8401.39070557.28540-0.473402.459301.69590HepG2PRPF8
WASF3ENSG00000132970.81090.94640835.343900.385004.516803.85490HepG2PTBP1
WASF3ENSG00000132970.8498.70390997.52340-1.0002015.7751014.50800HepG2PUF60
WASF3ENSG00000132970.8798.445201058.14030-0.406303.894803.10200HepG2PUM2
WASF3ENSG00000132970.8727.92510979.32730-0.428004.103503.08340HepG2RBM15
WASF3ENSG00000132970.81240.219701055.093200.233101.962601.50660HepG2RBM22
WASF3ENSG00000132970.8447.64860812.75420-0.8605010.174009.00570HepG2RPLP0
WASF3ENSG00000132970.8455.24120747.88760-0.716204.541403.33970HepG2RPS10
WASF3ENSG00000132970.8520.36260724.36700-0.477205.452804.60160HepG2SAFB2
WASF3ENSG00000132970.8458.55500600.03880-0.388002.286301.42860HepG2SERBP1
WASF3ENSG00000132970.8281.63720742.84060-1.399208.603406.00640HepG2SLTM
WASF3ENSG00000132970.8712.95960844.72620-0.244702.224801.63800HepG2SMN1
WASF3ENSG00000132970.8571.49910776.17650-0.441602.341601.46940HepG2SMNDC1
WASF3ENSG00000132970.8461.87180781.31230-0.758404.666003.64040HepG2SNRNP70
WASF3ENSG00000132970.8649.371801191.69840-0.8759020.3136019.28220HepG2SRFBP1
WASF3ENSG00000132970.81115.12390907.787400.296702.878202.39840HepG2SRSF1
WASF3ENSG00000132970.8747.64470984.90490-0.397604.503203.73880HepG2SRSF5
WASF3ENSG00000132970.8537.14140741.26400-0.464704.915504.02870HepG2SRSF7
WASF3ENSG00000132970.8618.93660738.52890-0.254902.020701.53460HepG2SRSF9
WASF3ENSG00000132970.8808.082001034.69290-0.356603.933703.34590HepG2SSB
WASF3ENSG00000132970.8436.74640607.18620-0.475303.760902.67790HepG2SUPT6H
WASF3ENSG00000132970.8356.45320719.03840-1.012409.444808.32040HepG2SUPV3L1
WASF3ENSG00000132970.8634.83180815.94030-0.362103.208702.61080HepG2TAF15
WASF3ENSG00000132970.8389.87470790.34290-1.0195016.4966015.45940HepG2TIAL1
WASF3ENSG00000132970.8521.25010797.44080-0.613408.970008.04460HepG2TRIM56
WASF3ENSG00000132970.8966.41160769.233200.329101.913701.38070HepG2U2AF1
WASF3ENSG00000132970.8645.70660779.72810-0.272102.255501.61430HepG2UPF1
WASF3ENSG00000132970.8320.70650658.50720-1.037907.544205.82750HepG2UPF2
WASF3ENSG00000132970.8913.92490752.799000.279702.367001.80370HepG2UTP3
WASF3ENSG00000132970.8466.34240707.81350-0.602004.064603.19330HepG2XRN2
WASF3ENSG00000132970.8311.07470646.04340-1.0544019.1186017.63360HepG2ZC3H8
WASF3ENSG00000132970.8676.79710857.55360-0.341503.796703.18350HepG2ZNF622
WASF3ENSG00000132970.858.9175024.501501.265702.417101.86240K562AQR
WASF3ENSG00000132970.855.2640016.245501.766203.313502.48960K562GRSF1
WASF3ENSG00000132970.849.9124021.554101.211302.619801.75020K562HNRNPU
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WASF3 is not available on ENCORE database.





9 RBPs can affect the splicing of WASF3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEWASF3ENSG00000132970.8chr13+2725068527250727272460082724612627254171272543380.332000.000000.00001includedHepG2U2AF2
MXEWASF3ENSG00000132970.8chr13+27250685272508612725417127254338272460082724612627255190272554570.136000.004160.064251includedHepG2FTO
MXEWASF3ENSG00000132970.8chr13+2725068527250861272541712725433827246008272461262725519027255457-0.388000.000000.000002includedHepG2SRSF1
MXEWASF3ENSG00000132970.8chr13+27250685272508612725417127254338272460082724612627255190272554570.089000.001250.042981includedHepG2SF3A3
MXEWASF3ENSG00000132970.8chr13+27250630272508612725417127254338272460082724612627255190272554570.201000.005290.031851includedHepG2U2AF2
MXEWASF3ENSG00000132970.8chr13+27250685272508612725417127254338272460082724612627255190272554570.070000.011610.060931includedHepG2U2AF2
MXEWASF3ENSG00000132970.8chr13+2725068527250861272541712725433827246008272461262725519027255457-0.175000.000080.004392includedHepG2PCBP1
MXEWASF3ENSG00000132970.8chr13+27250685272508612725417127254338272460082724612627255190272554570.169000.000010.003851includedHepG2HNRNPM
MXEWASF3ENSG00000132970.8chr13+2725068527250861272541712725433827246008272461262725519027255457-0.218000.001700.049482includedHepG2HNRNPU
MXEWASF3ENSG00000132970.8chr13+2725068527250861272541712725433827246008272461262725519027255457-0.150000.000170.016502includedHepG2LARP4
MXEWASF3ENSG00000132970.8chr13+27250685272508612725417127254338272460082724612627255190272554570.126000.000040.002431includedHepG2NCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for WASF3 is not avaliable on ENCORE database.