TTN-AS1

General Information

Gene Name       : TTN-AS1
Gene ID             : ENSG00000237298.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TTN-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TTN-AS1ENSG00000237298.922.5725.5024.04ENCSR000AEF
HepG2TTN-AS1ENSG00000237298.95.957.616.78ENCSR985KAT
K562TTN-AS1ENSG00000237298.925.8127.6526.73ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TTN-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TTN-AS1 RNA is bound by 12 proteins.  







eCLIP assay for TTN-AS1 is not avaliable on ENCORE database.





12 proteins are bound to TTN-AS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2179482908179483026+intron-Distal3.457296.75956HepG2U2AF2
chr2179417492179417539+intron-Distal3.957213.86809HepG2SUGP2
chr2179428907179428990+intron-Distal3.676666.72722HepG2SUGP2
chr2179432254179432321+intron-Distal5.120589.48778HepG2SUGP2
chr2179426368179426428+intron-Distal3.664735.06177HepG2SUGP2
chr2179429309179429358+intron-Distal3.898196.77642HepG2SUGP2
chr2179465972179466042+intron-Distal3.240735.12506HepG2SUGP2
chr2179436610179436656+intron-Distal3.746256.26907HepG2SUGP2
chr2179432373179432394+intron-Distal4.243954.61447HepG2SUGP2
chr2179422781179422854+intron-Distal3.369674.08528HepG2SUGP2
chr2179478499179478562+intron-Distal4.871865.81672HepG2U2AF2
chr2179406668179406764+intron-Distal3.426539.71858HepG2PTBP1
chr2179434371179434407+intron-Distal4.283254.53347HepG2SUGP2
chr2179406696179406770+intron-Distal3.598113.03452HepG2U2AF2
chr2179438644179438717+intron-Distal3.400983.35050HepG2SUGP2
chr2179439059179439118+intron-Distal4.572815.59955HepG2SUGP2
chr2179427541179427569+intron-Distal4.243954.61447HepG2SUGP2
chr2179403639179403698+intron-Distal3.536474.05280K562CSTF2T
chr2179424883179424926+intron-Distal3.748556.23177HepG2SUGP2
chr2179462420179462492+intron-Distal,intron-Proximal4.238204.47532K562U2AF2
chr2179428586179428630+intron-Distal4.599396.07481HepG2SUGP2
chr2179424428179424451+intron-Distal4.088733.86809HepG2SUGP2
chr2179413710179413815+intron-Distal4.002903.59673K562HNRNPL
chr2179427140179427197+intron-Distal3.863836.77642HepG2SUGP2
chr2179428351179428394+intron-Distal3.562504.81844HepG2SUGP2
chr2179425662179425712+intron-Distal4.169238.91693HepG2SUGP2
chr2179396909179397015+intron-Distal4.374823.91475K562PTBP1
chr2179462422179462468+intron-Distal,intron-Proximal3.166303.17814K562U2AF1
chr2179406731179406770+intron-Distal5.1521220.16068K562PTBP1
chr2179462419179462508+intron-Distal,intron-Proximal4.007643.47425HepG2U2AF1
chr2179431365179431426+intron-Distal4.170197.03506HepG2SUGP2
chr2179427245179427321+intron-Distal4.972097.65425HepG2SUGP2
chr2179417191179417232+intron-Distal3.881213.54208HepG2SUGP2
chr2179477923179477966+intron-Distal3.950387.40091HepG2U2AF2
chr2179432151179432207+intron-Distal4.900988.16055HepG2SUGP2
chr2179429551179429598+intron-Distal4.325704.03915HepG2SUGP2
chr2179428074179428176+intron-Distal5.4503111.84639HepG2SUGP2
chr2179430936179430998+intron-Distal5.3930412.10180HepG2SUGP2
chr2179434027179434065+intron-Distal4.454635.58061HepG2SUGP2
chr2179428426179428464+intron-Distal3.457214.35402HepG2SUGP2
chr2179431266179431320+intron-Distal3.988727.54890HepG2SUGP2
chr2179429769179429832+intron-Distal3.713169.00162HepG2SUGP2
chr2179416941179417000+intron-Distal3.432764.35402HepG2SUGP2
chr2179439836179439911+intron-Distal3.892344.49024K562AQR
chr2179432451179432490+intron-Distal4.622296.05753HepG2SUGP2
chr2179409078179409149+intron-Distal3.885023.63454HepG2SUGP2
chr2179433000179433052+intron-Distal3.653055.30446HepG2SUGP2
chr2179435203179435257+intron-Distal4.671785.59955HepG2SUGP2
chr2179454484179454590+intron-Distal4.506984.61447HepG2SUGP2
chr2179431834179431842+intron-Distal3.846023.54208HepG2SUGP2
chr2179428729179428767+intron-Distal3.553544.84410HepG2SUGP2
chr2179439842179439889+intron-Distal4.185054.36036HepG2SUGP2
chr2179470996179471075+intron-Distal3.490714.14896HepG2HNRNPM
chr2179427960179428074+intron-Distal4.7962512.35442HepG2SUGP2
chr2179434628179434715+intron-Distal5.4924112.60653HepG2SUGP2
chr2179478397179478517+intron-Distal4.0402410.06143K562KHSRP
chr2179462421179462466+intron-Distal,intron-Proximal5.5070510.40229HepG2U2AF2
chr2179432576179432661+intron-Distal4.5647212.59187HepG2SUGP2
chr2179474159179474246+intron-Distal4.628813.83958HepG2QKI
chr2179420217179420274+intron-Distal3.519574.08204K562PTBP1
chr2179392404179392472+intron-Distal4.364373.81597K562RBM15
chr2179392615179392753+intron-Distal3.896203.37631K562HNRNPL
chr2179477763179477818+intron-Distal3.631256.51722HepG2U2AF2
chr2179395527179395592+intron-Distal4.068324.27460K562HNRNPM
chr2179474119179474216+intron-Distal4.498817.30165K562QKI
chr2179433068179433109+intron-Distal3.620925.08575HepG2SUGP2
chr2179406688179406731+intron-Distal4.5325717.05717K562PTBP1
chr2179467193179467251+intron-Distal3.685053.04224HepG2SUGP2
chr2179400514179400584+intron-Distal,intron-Proximal4.045393.12843K562PRPF8
chr2179437009179437083+intron-Distal5.2145010.33470HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TTN-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TTN-AS1 is not available on ENCORE database.

  • 52 RBPs can affect the levels of TTN-AS1.  








The Knockdown/knockout RNA-Seq assay for TTN-AS1 is not available on ENCORE database.





52 RBPs can affect the gene expression of TTN-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TTN-AS1ENSG00000237298.4114.83200172.52770-0.587302.629801.97730HepG2CKAP4
TTN-AS1ENSG00000237298.4231.30210128.435400.848602.488201.76700HepG2CNOT7
TTN-AS1ENSG00000237298.4165.72440112.090700.564001.977801.31260HepG2DDX55
TTN-AS1ENSG00000237298.4199.10960114.676300.795902.888602.18660HepG2EIF4B
TTN-AS1ENSG00000237298.4315.17950218.530300.528203.320702.67100HepG2ETF1
TTN-AS1ENSG00000237298.481.45620168.62430-1.049705.588104.39690HepG2EWSR1
TTN-AS1ENSG00000237298.4184.0000073.893201.316104.221802.96900HepG2FTO
TTN-AS1ENSG00000237298.4211.92430110.239200.942804.880204.00790HepG2G3BP1
TTN-AS1ENSG00000237298.4238.05590169.998600.485702.370501.49690HepG2HNRNPA2B1
TTN-AS1ENSG00000237298.4279.38990168.500500.729405.415104.49850HepG2HNRNPL
TTN-AS1ENSG00000237298.4174.04070112.056900.635102.225901.61230HepG2IGF2BP2
TTN-AS1ENSG00000237298.4174.34190109.095400.676202.499401.72890HepG2MSI2
TTN-AS1ENSG00000237298.499.67830175.09280-0.812803.605302.93640HepG2PUF60
TTN-AS1ENSG00000237298.4260.61480185.868300.487502.744902.15380HepG2PUM1
TTN-AS1ENSG00000237298.4168.45060110.647100.606302.150901.58830HepG2QKI
TTN-AS1ENSG00000237298.4263.76610182.651200.530102.634302.12600HepG2RBM22
TTN-AS1ENSG00000237298.4176.59660100.412500.814403.592502.83120HepG2RBM25
TTN-AS1ENSG00000237298.471.31680208.70210-1.5491010.697809.30900HepG2SF3A3
TTN-AS1ENSG00000237298.4247.35750167.885700.559003.145602.40500HepG2SLBP
TTN-AS1ENSG00000237298.4290.36370206.298300.493002.856102.34930HepG2SRFBP1
TTN-AS1ENSG00000237298.4179.4659090.311600.990604.124703.47570HepG2SRSF9
TTN-AS1ENSG00000237298.491.34980137.80510-0.593202.292301.76920HepG2TRIM56
TTN-AS1ENSG00000237298.4107.1324065.941500.700002.403801.69560HepG2UCHL5
TTN-AS1ENSG00000237298.4128.45520203.56040-0.664203.687203.08040HepG2ZNF622
TTN-AS1ENSG00000237298.4269.46980628.97580-1.2229010.816009.78700K562AGGF1
TTN-AS1ENSG00000237298.4380.37270691.06240-0.861407.576205.73920K562AKAP8
TTN-AS1ENSG00000237298.4319.59070654.45640-1.034109.938408.59990K562AKAP8L
TTN-AS1ENSG00000237298.4390.36150686.64190-0.814706.947405.40720K562ATP5C1
TTN-AS1ENSG00000237298.4528.31860751.73000-0.508804.149402.66680K562CCDC124
TTN-AS1ENSG00000237298.4482.14540737.95910-0.614104.627102.71320K562DDX19B
TTN-AS1ENSG00000237298.4392.04630704.37610-0.845308.360706.68650K562DKC1
TTN-AS1ENSG00000237298.4333.21740485.21010-0.542103.648002.66390K562FIP1L1
TTN-AS1ENSG00000237298.4264.91290481.11110-0.860903.654602.18620K562HNRNPA2B1
TTN-AS1ENSG00000237298.4657.99320363.142500.857406.011705.16500K562HNRNPC
TTN-AS1ENSG00000237298.4861.37290588.266200.550105.524803.97380K562HNRNPL
TTN-AS1ENSG00000237298.4235.76080399.10750-0.759504.837203.56770K562HNRNPM
TTN-AS1ENSG00000237298.4507.60860657.82050-0.374002.157201.45200K562HSPD1
TTN-AS1ENSG00000237298.4364.61750694.61680-0.9298010.042308.19880K562KIF1C
TTN-AS1ENSG00000237298.4338.75860664.85840-0.9728010.736408.17810K562MAK16
TTN-AS1ENSG00000237298.4376.35960778.13580-1.047908.387106.62290K562MBNL1
TTN-AS1ENSG00000237298.4278.82200545.41020-0.968007.140405.47270K562NAA15
TTN-AS1ENSG00000237298.4192.85540420.98000-1.126205.376603.86340K562PABPN1
TTN-AS1ENSG00000237298.4423.24230550.83140-0.380102.134801.41870K562PPIG
TTN-AS1ENSG00000237298.4250.74770404.19320-0.688804.135603.21880K562PRPF8
TTN-AS1ENSG00000237298.4839.830801113.52780-0.407003.159102.28850K562PUF60
TTN-AS1ENSG00000237298.4302.53200649.19420-1.1016011.3584010.30620K562PUS1
TTN-AS1ENSG00000237298.4281.77440632.41510-1.1663013.0935011.79940K562RBM15
TTN-AS1ENSG00000237298.4296.82960517.93830-0.803102.980701.37070K562RBM39
TTN-AS1ENSG00000237298.4222.00260385.08000-0.794602.566601.42490K562SF1
TTN-AS1ENSG00000237298.4255.26830408.53820-0.678505.628204.38190K562SF3B4
TTN-AS1ENSG00000237298.4239.31550442.11180-0.885503.462202.03050K562SNRNP200
TTN-AS1ENSG00000237298.4326.77910431.36610-0.400602.244901.59990K562SRSF1
TTN-AS1ENSG00000237298.4257.83580380.86020-0.562802.981001.83940K562U2AF1
TTN-AS1ENSG00000237298.4283.85290393.30650-0.470502.932502.10550K562U2AF2
TTN-AS1ENSG00000237298.4345.00450658.06050-0.931605.456103.45020K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TTN-AS1 is not available on ENCORE database.





8 RBPs can affect the splicing of TTN-AS1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETTN-AS1ENSG00000237298.4chr2+179402330179402418179388018179388363179403424179403649-0.279000.004510.06818excludedK562SF3B4
SETTN-AS1ENSG00000237298.4chr2+179400458179400555179388018179388363179462322179462408-0.182000.001550.05162excludedK562PRPF8
SETTN-AS1ENSG00000237298.4chr2+179464320179464477179462322179462408179465284179465394-0.543000.000930.08765excludedHepG2RBFOX2
MXETTN-AS1ENSG00000237298.4chr2+179465284179465394179477938179478038179462322179462408179478761179479002-0.565000.000320.033572includedK562HNRNPL
MXETTN-AS1ENSG00000237298.4chr2+1794623221794624081794624341794625351794558651794560411794652021794653940.068000.002500.061871includedK562UCHL5
MXETTN-AS1ENSG00000237298.4chr2+179465284179465394179478761179479000179462322179462408179480049179480101-0.391000.001150.090962includedK562FMR1
MXETTN-AS1ENSG00000237298.4chr2+179462322179462408179462434179462535179455884179456041179465202179465394-0.136000.003150.058152includedK562SUPV3L1
MXETTN-AS1ENSG00000237298.4chr2+179474987179475073179478761179479000179472893179472993179480049179480101-0.447000.004590.060052includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TTN-AS1 is not avaliable on ENCORE database.