TBC1D4

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TBC1D4	ENSG00000136111.13	21.01	20.71	20.86	ENCSR000AEF
HepG2	TBC1D4	ENSG00000136111.13	27.95	26.65	27.30	ENCSR985KAT
K562	TBC1D4	ENSG00000136111.13	5.76	6.74	6.25	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TBC1D4 is not avaliable on ENCORE database.

Proteins bound to RNA

TBC1D4 RNA is bound by 41 proteins.

eCLIP assay for TBC1D4 is not avaliable on ENCORE database.

41 proteins are bound to TBC1D4 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	75930281	75930286	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.16530	5.60276	HepG2	BCLAF1
chr13	75930281	75930306	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.70054	3.64266	HepG2	PPIG
chr13	75936292	75936344	-	3'-UTR,CDS,intron-Distal	4.79505	3.80461	HepG2	RBM15
chr13	75900294	75900353	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.47122	19.05983	HepG2	PRPF8
chr13	75915271	75915334	-	3'-UTR,CDS,intron-Distal	3.04730	16.22534	HepG2	BCLAF1
chr13	75915662	75915723	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.28809	6.00907	HepG2	PPIG
chr13	75859781	75859862	-	3'-UTR,intron-Distal	3.38669	5.18546	HepG2	UPF1
chr13	75860858	75860936	-	3'-UTR,CDS,intron-Distal	3.87359	4.86632	HepG2	G3BP1
chr13	75900420	75900491	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.24547	8.63039	HepG2	GRWD1
chr13	75900549	75900560	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.17689	4.68592	HepG2	PPIG
chr13	75859541	75859593	-	3'-UTR,intron-Distal	4.92895	6.37354	HepG2	LIN28B
chr13	75915353	75915367	-	3'-UTR,CDS,intron-Distal	3.65376	5.97823	HepG2	BCLAF1
chr13	75915682	75915744	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.03716	3.88217	HepG2	U2AF2
chr13	75900491	75900561	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.57946	8.70156	HepG2	GRWD1
chr13	75930318	75930370	-	3'-UTR,CDS,intron-Distal	3.41742	14.59078	HepG2	BCLAF1
chr13	75923307	75923333	-	3'-UTR,CDS,intron-Distal	3.36143	3.41665	HepG2	GRWD1
chr13	75930225	75930308	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.22053	13.70516	HepG2	PRPF8
chr13	75936237	75936305	-	3'-UTR,CDS,intron-Distal	3.15796	3.97784	HepG2	FXR2
chr13	75930286	75930312	-	3'-UTR,CDS,intron-Distal	3.37701	8.71292	HepG2	BCLAF1
chr13	75930327	75930409	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.00486	9.12729	HepG2	U2AF2
chr13	75886937	75886994	-	3'-UTR,CDS,intron-Distal	3.42323	6.02862	HepG2	GRWD1
chr13	75894143	75894206	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.53282	6.86842	HepG2	U2AF2
chr13	75936421	75936474	-	3'-UTR,CDS,intron-Distal	3.04512	3.52281	HepG2	GRWD1
chr13	75936553	75936619	-	3'-UTR,CDS,intron-Distal	3.39692	7.91657	HepG2	PPIG
chr13	75923263	75923348	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.22379	11.80896	HepG2	PRPF8
chr13	75911074	75911165	-	3'-UTR,CDS,intron-Distal	3.70701	15.59767	HepG2	BCLAF1
chr13	75930212	75930306	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.39217	5.58907	HepG2	EFTUD2
chr13	75936121	75936195	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.73347	24.21084	HepG2	PRPF8
chr13	76055837	76055891	-	5'-UTR,CDS,intron-Distal	4.43993	9.28243	HepG2	PPIG
chr13	76055369	76055430	-	5'-UTR,CDS,intron-Distal	4.07335	3.15006	K562	RBM15
chr13	76055919	76055961	-	5'-UTR,intron-Distal	3.38787	6.88189	HepG2	DDX3X
chr13	76056138	76056203	-	5'-UTR,intron-Distal	3.56377	4.18161	HepG2	RBM15
chr13	76055860	76055956	-	5'-UTR,CDS,intron-Distal	3.54113	10.26348	HepG2	EIF3H
chr13	76056184	76056216	-	5'-UTR,intron-Distal	4.39150	5.48415	HepG2	EIF3H
chr13	76056060	76056143	-	5'-UTR,intron-Distal	3.27170	11.32761	HepG2	DDX3X
chr13	76056002	76056065	-	5'-UTR,intron-Distal	3.46251	8.02027	HepG2	EIF3H
chr13	76055716	76055734	-	5'-UTR,CDS,intron-Distal	3.48271	4.38588	HepG2	DDX3X
chr13	75873424	75873493	-	CDS,intron-Distal,intron-Proximal	4.78419	15.79030	HepG2	PRPF8
chr13	75873611	75873700	-	CDS,intron-Distal	3.73902	10.54913	HepG2	GRWD1
chr13	75873552	75873576	-	CDS,intron-Distal	3.27772	5.79905	HepG2	BCLAF1
chr13	75884264	75884335	-	CDS,intron-Distal,intron-Proximal	4.70110	3.56713	HepG2	SF3B4
chr13	75876368	75876407	-	CDS,intron-Distal,intron-Proximal	4.81522	4.02817	HepG2	PRPF8
chr13	75876503	75876537	-	CDS,intron-Distal	3.59099	10.50604	HepG2	BCLAF1
chr13	75861003	75861056	-	CDS,intron-Distal	3.19252	3.24162	HepG2	G3BP1
chr13	75880497	75880576	-	CDS,intron-Distal,intron-Proximal	3.77865	21.19068	HepG2	BCLAF1
chr13	75884097	75884151	-	CDS,intron-Distal,intron-Proximal	3.07099	7.10982	HepG2	GRWD1
chr13	75884174	75884219	-	CDS,intron-Distal	3.11216	5.39266	HepG2	GRWD1
chr13	75868965	75869013	-	CDS,intron-Distal,intron-Proximal	3.41488	4.83899	HepG2	PRPF8
chr13	75880448	75880480	-	CDS,intron-Distal,intron-Proximal	5.14498	14.25738	HepG2	BCLAF1
chr13	75884131	75884181	-	CDS,intron-Distal,intron-Proximal	3.15043	8.01569	HepG2	BCLAF1
chr13	75884232	75884280	-	CDS,intron-Distal	3.75806	4.97737	HepG2	G3BP1
chr13	75876389	75876440	-	CDS,intron-Distal	3.57620	9.41803	HepG2	BCLAF1
chr13	75884061	75884131	-	CDS,intron-Distal,intron-Proximal	4.70582	24.40170	HepG2	BCLAF1
chr13	75884038	75884102	-	CDS,intron-Distal,intron-Proximal	5.08468	8.11807	HepG2	PRPF8
chr13	75866351	75866400	-	CDS,intron-Distal	3.98217	11.91109	HepG2	BCLAF1
chr13	75884262	75884372	-	CDS,intron-Distal,intron-Proximal	3.44358	18.38024	HepG2	SF3A3
chr13	75861055	75861087	-	CDS,intron-Distal	3.83762	6.81385	HepG2	BCLAF1
chr13	75968466	75968533	-	intron-Distal	4.02005	5.18845	HepG2	U2AF2
chr13	75878580	75878623	-	intron-Distal	3.03141	3.46866	HepG2	U2AF2
chr13	75988727	75988740	-	intron-Distal	3.51377	8.60857	HepG2	HNRNPL
chr13	76023608	76023686	-	intron-Distal	3.96483	3.21613	HepG2	DDX52
chr13	75928142	75928216	-	intron-Distal	4.45925	5.15027	HepG2	MATR3
chr13	75980444	75980478	-	intron-Distal	3.50864	4.28420	HepG2	HNRNPM
chr13	75944891	75944949	-	intron-Distal	4.23204	4.51735	HepG2	QKI
chr13	75964921	75964999	-	intron-Distal	6.62831	19.77775	HepG2	PCBP2
chr13	75916542	75916616	-	intron-Distal	3.59605	4.57751	HepG2	U2AF2
chr13	75879012	75879045	-	intron-Distal	3.51866	3.89405	HepG2	PTBP1
chr13	76047776	76047869	-	intron-Distal	3.50290	6.58367	HepG2	HNRNPM
chr13	76055141	76055208	-	intron-Distal	4.03868	3.37829	HepG2	DROSHA
chr13	75976848	75976906	-	intron-Distal	3.59261	3.94088	HepG2	QKI
chr13	76030936	76030986	-	intron-Distal	4.71213	11.18312	HepG2	HNRNPM
chr13	75881679	75881734	-	intron-Distal	3.55525	13.48311	HepG2	U2AF2
chr13	75968957	75968978	-	intron-Distal	4.06317	7.08613	HepG2	CSTF2
chr13	76052152	76052214	-	intron-Distal	4.18824	4.00239	HepG2	KHSRP
chr13	76002510	76002556	-	intron-Distal	3.10661	3.97172	HepG2	QKI
chr13	76055278	76055355	-	intron-Distal	5.65305	13.42410	HepG2	GTF2F1
chr13	76046181	76046241	-	intron-Distal	3.96975	4.02766	HepG2	HNRNPC
chr13	75945493	75945547	-	intron-Distal	3.72878	3.16028	HepG2	SUGP2
chr13	76006745	76006840	-	intron-Distal	3.08362	4.73159	HepG2	SFPQ
chr13	75988740	75988756	-	intron-Distal	3.10333	6.69784	HepG2	HNRNPL
chr13	75881743	75881791	-	intron-Distal	3.53489	9.32771	HepG2	KHSRP
chr13	75968978	75969009	-	intron-Distal	3.80881	5.37079	HepG2	CSTF2
chr13	75981496	75981510	-	intron-Distal	4.06440	3.27946	HepG2	HNRNPM
chr13	75971139	75971196	-	intron-Distal	3.66011	4.21358	HepG2	U2AF2
chr13	75885274	75885403	-	intron-Distal	3.22103	4.24070	HepG2	GRWD1
chr13	75968924	75968957	-	intron-Distal	4.60192	5.45333	HepG2	CSTF2
chr13	76030838	76030899	-	intron-Distal	3.12229	7.08259	HepG2	SUGP2
chr13	76004067	76004134	-	intron-Distal	3.27859	3.59771	HepG2	QKI
chr13	76039422	76039515	-	intron-Distal	3.33237	6.93753	HepG2	SFPQ
chr13	75988573	75988625	-	intron-Distal	4.49961	16.94347	HepG2	HNRNPL
chr13	75988675	75988701	-	intron-Distal	4.10439	19.46242	HepG2	HNRNPL
chr13	76037890	76037955	-	intron-Distal	3.05570	3.47308	HepG2	TAF15
chr13	76033835	76033958	-	intron-Distal	3.32439	4.79189	HepG2	SFPQ
chr13	76003608	76003692	-	intron-Distal	3.35506	4.41834	HepG2	HNRNPC
chr13	75929063	75929147	-	intron-Distal	4.00682	6.41317	HepG2	QKI
chr13	75868537	75868645	-	intron-Distal	3.58038	4.28919	HepG2	KHSRP
chr13	75980345	75980379	-	intron-Distal	3.25457	3.66782	HepG2	HNRNPM
chr13	75883337	75883386	-	intron-Distal	3.45852	6.92711	HepG2	KHSRP
chr13	76014894	76014956	-	intron-Distal	4.92205	4.38124	HepG2	ILF3
chr13	75870772	75870855	-	intron-Distal	5.58651	9.51434	HepG2	PTBP1
chr13	76023449	76023526	-	intron-Distal	3.32362	6.99408	HepG2	KHSRP
chr13	76054972	76055027	-	intron-Distal	3.88626	3.55542	HepG2	TIAL1
chr13	75994888	75994965	-	intron-Distal	3.06504	3.00914	HepG2	PTBP1
chr13	76055273	76055356	-	intron-Distal	3.57200	7.91169	HepG2	PRPF4
chr13	75883840	75883937	-	intron-Distal	4.08038	6.63605	HepG2	KHSRP
chr13	76052389	76052450	-	intron-Distal	3.12084	9.25077	HepG2	QKI
chr13	75881704	75881760	-	intron-Distal	5.87792	13.76582	HepG2	SF3B4
chr13	76017837	76017888	-	intron-Distal	4.10684	17.24610	HepG2	HNRNPM
chr13	75910477	75910537	-	intron-Distal	3.74322	3.38413	HepG2	HNRNPC
chr13	75980854	75980893	-	intron-Distal	4.85588	5.42395	HepG2	HNRNPM
chr13	76052231	76052359	-	intron-Distal	3.17483	5.54910	HepG2	SFPQ
chr13	75981558	75981633	-	intron-Distal	3.59361	8.43537	HepG2	HNRNPM
chr13	75883718	75883840	-	intron-Distal	3.72030	9.24892	HepG2	KHSRP
chr13	75968608	75968660	-	intron-Distal	4.54037	4.64001	HepG2	U2AF2
chr13	76039728	76039767	-	intron-Distal	3.51186	3.68481	HepG2	HNRNPM
chr13	76052365	76052418	-	intron-Distal	3.04126	3.04623	HepG2	KHSRP
chr13	76034594	76034690	-	intron-Distal	3.05885	4.89133	HepG2	PTBP1
chr13	75944974	75945064	-	intron-Distal	4.16903	8.52957	HepG2	PTBP1
chr13	76055172	76055230	-	intron-Distal	3.27908	6.99102	HepG2	XRN2
chr13	75999925	75999983	-	intron-Distal	4.05028	13.70448	HepG2	QKI
chr13	75971132	75971211	-	intron-Distal	6.22875	31.98766	HepG2	QKI
chr13	76001120	76001186	-	intron-Distal	4.62226	9.84223	HepG2	ILF3
chr13	75977157	75977225	-	intron-Distal	3.15685	5.84333	HepG2	RBFOX2
chr13	75867241	75867298	-	intron-Distal	3.82128	3.38413	HepG2	HNRNPC
chr13	76028790	76028882	-	intron-Distal	3.75696	10.10774	HepG2	QKI
chr13	76052254	76052324	-	intron-Distal	4.80327	9.10637	HepG2	QKI
chr13	76017965	76018007	-	intron-Distal	3.05952	3.23296	HepG2	SUGP2
chr13	75949214	75949259	-	intron-Distal	4.73366	5.72853	HepG2	HNRNPM
chr13	75932944	75933005	-	intron-Distal	4.49040	6.29797	HepG2	HNRNPC
chr13	75982127	75982275	-	intron-Distal	3.51826	4.35278	HepG2	TAF15
chr13	76055103	76055233	-	intron-Distal	3.26614	13.84445	HepG2	PRPF4
chr13	75922641	75922706	-	intron-Distal	5.06006	6.23638	HepG2	QKI
chr13	75915390	75915450	-	intron-Distal,intron-Proximal	3.82701	3.22073	HepG2	KHSRP
chr13	75878797	75878940	-	intron-Distal	5.15918	26.05631	HepG2	PTBP1
chr13	76030874	76030936	-	intron-Distal	5.96338	11.13888	HepG2	HNRNPM
chr13	75907890	75907980	-	intron-Distal	4.53034	3.06595	HepG2	BCLAF1
chr13	76014956	76015018	-	intron-Distal	4.26141	5.31375	HepG2	ILF3
chr13	75971211	75971276	-	intron-Distal	6.01811	33.41898	HepG2	QKI
chr13	76054967	76055055	-	intron-Distal	3.03083	6.53547	HepG2	IGF2BP1
chr13	76017888	76017904	-	intron-Distal	3.98371	14.53055	HepG2	HNRNPM
chr13	75922584	75922641	-	intron-Distal	4.34323	3.16986	HepG2	QKI
chr13	76048213	76048301	-	intron-Distal	3.68994	6.47506	HepG2	SFPQ
chr13	75915155	75915203	-	intron-Distal,intron-Proximal	4.27734	10.75955	HepG2	U2AF2
chr13	75999070	75999117	-	intron-Distal	3.29625	3.35050	HepG2	SUGP2
chr13	76054972	76055023	-	intron-Distal	4.04126	3.57574	HepG2	SRSF7
chr13	76017964	76018014	-	intron-Distal	4.01718	8.25342	HepG2	HNRNPM
chr13	76027360	76027462	-	intron-Distal	4.83330	7.41617	HepG2	CSTF2
chr13	75883386	75883468	-	intron-Distal	3.38873	6.29887	HepG2	KHSRP
chr13	76052144	76052254	-	intron-Distal	4.48157	22.89514	HepG2	QKI
chr13	76055276	76055371	-	intron-Distal	3.35810	13.91332	HepG2	CSTF2T
chr13	75981703	75981729	-	intron-Distal	4.23836	4.31871	HepG2	HNRNPM
chr13	75988466	75988573	-	intron-Distal	4.51877	18.25194	HepG2	HNRNPL
chr13	75982942	75983028	-	intron-Distal	4.67777	7.78003	HepG2	CSTF2
chr13	75945069	75945123	-	intron-Distal	3.90440	4.78196	HepG2	PTBP1
chr13	76055126	76055232	-	intron-Distal	4.67746	11.68256	HepG2	GTF2F1
chr13	76055047	76055205	-	intron-Distal	3.43185	4.85269	HepG2	SRSF7
chr13	75981820	75981857	-	intron-Distal	3.60684	5.13070	HepG2	HNRNPM
chr13	76055071	76055126	-	intron-Distal	3.67494	5.01332	HepG2	GTF2F1
chr13	75889066	75889118	-	intron-Distal	3.01295	3.45912	HepG2	HNRNPC
chr13	75981746	75981790	-	intron-Distal	3.70098	7.58130	HepG2	HNRNPM
chr13	75988658	75988675	-	intron-Distal	4.38386	18.41427	HepG2	HNRNPL
chr13	75988701	75988727	-	intron-Distal	4.32103	16.41550	HepG2	HNRNPL
chr13	75926815	75926864	-	intron-Distal	3.41068	5.42728	HepG2	HNRNPM
chr13	76017612	76017691	-	intron-Distal	4.11925	15.23465	HepG2	HNRNPM
chr13	76030843	76030866	-	intron-Distal	4.73248	3.97018	HepG2	HNRNPM
chr13	75981262	75981339	-	intron-Distal	3.81903	6.58367	HepG2	HNRNPM
chr13	75928737	75928849	-	intron-Distal	3.97009	3.06084	HepG2	HNRNPK
chr13	75884887	75884951	-	intron-Distal	3.37876	6.02476	HepG2	HLTF
chr13	75988772	75988811	-	intron-Distal	3.14248	8.03445	HepG2	HNRNPL
chr13	76049134	76049192	-	intron-Distal	4.43234	3.82670	HepG2	SFPQ
chr13	76054959	76055034	-	intron-Distal	4.19119	4.66266	K562	TARDBP
chr13	75972821	75972999	-	intron-Distal	3.63353	8.31127	HepG2	QKI
chr13	75988628	75988644	-	intron-Distal	5.56737	22.39828	HepG2	HNRNPL
chr13	75988581	75988680	-	intron-Distal	4.99812	5.25929	HepG2	GTF2F1
chr13	75988644	75988658	-	intron-Distal	4.92489	22.15546	HepG2	HNRNPL
chr13	75881696	75881743	-	intron-Distal	3.66510	10.26213	HepG2	KHSRP
chr13	75944905	75944941	-	intron-Distal	4.21482	4.07628	HepG2	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for TBC1D4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TBC1D4 is not available on ENCORE database.
123 RBPs can affect the levels of TBC1D4.

The Knockdown/knockout RNA-Seq assay for TBC1D4 is not available on ENCORE database.

123 RBPs can affect the gene expression of TBC1D4 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TBC1D4	ENSG00000136111.8	1934.32870	3379.40680	-0.80490	11.49280	9.79270	HepG2	ABCF1
TBC1D4	ENSG00000136111.8	3018.82630	3408.58280	-0.17520	2.24630	1.68750	HepG2	ACO1
TBC1D4	ENSG00000136111.8	1550.17180	2634.23350	-0.76500	11.48520	9.63730	HepG2	ADAR
TBC1D4	ENSG00000136111.8	2707.84930	4585.12520	-0.75980	9.33150	8.41790	HepG2	AKAP1
TBC1D4	ENSG00000136111.8	2267.79740	2963.81890	-0.38620	2.83140	1.78140	HepG2	AKAP8
TBC1D4	ENSG00000136111.8	2968.87990	3424.77770	-0.20610	2.53950	1.80140	HepG2	AKAP8L
TBC1D4	ENSG00000136111.8	4675.29810	3793.74790	0.30130	2.25620	1.54320	HepG2	ASCC1
TBC1D4	ENSG00000136111.8	972.88720	2161.94750	-1.15200	17.29770	14.78610	HepG2	BCCIP
TBC1D4	ENSG00000136111.8	1353.81950	1666.49130	-0.29980	2.32890	1.77430	HepG2	BOP1
TBC1D4	ENSG00000136111.8	2211.34200	2637.85070	-0.25440	2.54430	1.80340	HepG2	CALR
TBC1D4	ENSG00000136111.8	2725.15540	4015.51330	-0.55920	4.69580	3.41190	HepG2	CCAR1
TBC1D4	ENSG00000136111.8	1808.16840	3604.34050	-0.99520	18.68020	16.87830	HepG2	CIRBP
TBC1D4	ENSG00000136111.8	2895.08460	3408.05900	-0.23530	4.07990	3.30170	HepG2	CKAP4
TBC1D4	ENSG00000136111.8	2000.95770	3152.55050	-0.65580	18.26170	16.55580	HepG2	DDX19B
TBC1D4	ENSG00000136111.8	1038.14390	2838.56210	-1.45120	43.79080	41.58040	HepG2	DDX21
TBC1D4	ENSG00000136111.8	2038.24720	2777.65200	-0.44650	6.04490	4.70010	HepG2	DDX24
TBC1D4	ENSG00000136111.8	1430.16840	1988.94930	-0.47580	3.24600	1.85880	HepG2	DDX27
TBC1D4	ENSG00000136111.8	1935.07510	4392.07810	-1.18250	24.30290	22.64010	HepG2	DDX3X
TBC1D4	ENSG00000136111.8	1358.10860	2125.61070	-0.64630	6.15350	5.05530	HepG2	DDX55
TBC1D4	ENSG00000136111.8	2796.65360	1737.30640	0.68670	4.10060	2.92250	HepG2	DDX59
TBC1D4	ENSG00000136111.8	1817.84730	2849.39830	-0.64840	8.89650	7.20290	HepG2	DDX5
TBC1D4	ENSG00000136111.8	2980.04160	3773.18030	-0.34040	2.31590	1.74650	HepG2	DDX6
TBC1D4	ENSG00000136111.8	1391.92800	3261.14620	-1.22830	60.07570	58.02060	HepG2	DKC1
TBC1D4	ENSG00000136111.8	2004.92270	2652.58070	-0.40390	6.54280	5.49560	HepG2	DNAJC21
TBC1D4	ENSG00000136111.8	1817.65350	2756.95880	-0.60100	7.21480	5.79960	HepG2	EEF2
TBC1D4	ENSG00000136111.8	1330.23630	2298.38510	-0.78890	11.58060	9.36350	HepG2	EFTUD2
TBC1D4	ENSG00000136111.8	1709.84970	2238.06490	-0.38840	3.09860	2.14620	HepG2	EIF3D
TBC1D4	ENSG00000136111.8	1916.06800	2680.49730	-0.48440	6.97700	5.38820	HepG2	EIF3G
TBC1D4	ENSG00000136111.8	1968.60820	4008.07310	-1.02570	15.95330	14.43290	HepG2	EIF4A3
TBC1D4	ENSG00000136111.8	2565.81130	3851.50320	-0.58600	8.38850	7.00290	HepG2	EIF4G2
TBC1D4	ENSG00000136111.8	2246.55540	2927.22260	-0.38180	3.82370	2.55260	HepG2	ESF1
TBC1D4	ENSG00000136111.8	3529.99530	5225.48380	-0.56590	17.08130	15.79490	HepG2	ETF1
TBC1D4	ENSG00000136111.8	2221.69550	3330.98700	-0.58430	9.57190	8.04100	HepG2	EWSR1
TBC1D4	ENSG00000136111.8	3440.04680	2704.99660	0.34670	3.70370	2.40820	HepG2	FASTKD2
TBC1D4	ENSG00000136111.8	2745.77770	3412.32440	-0.31350	2.17730	1.49050	HepG2	FIP1L1
TBC1D4	ENSG00000136111.8	3133.01950	2001.29930	0.64650	10.76750	9.26400	HepG2	FUBP3
TBC1D4	ENSG00000136111.8	3207.66140	4044.40550	-0.33440	2.67690	1.99640	HepG2	FXR1
TBC1D4	ENSG00000136111.8	2939.79400	3751.55420	-0.35180	2.60130	1.95620	HepG2	G3BP1
TBC1D4	ENSG00000136111.8	3189.63250	3983.04970	-0.32050	2.54900	1.69620	HepG2	G3BP2
TBC1D4	ENSG00000136111.8	1021.54070	1992.71630	-0.96400	16.51820	14.52420	HepG2	GEMIN5
TBC1D4	ENSG00000136111.8	1962.17580	2864.60410	-0.54590	4.94740	3.58070	HepG2	GNB2L1
TBC1D4	ENSG00000136111.8	1156.60800	1734.09640	-0.58430	5.54800	4.66330	HepG2	GPKOW
TBC1D4	ENSG00000136111.8	1003.24060	2677.99220	-1.41650	41.62940	39.71820	HepG2	HNRNPA1
TBC1D4	ENSG00000136111.8	1619.76030	2978.74460	-0.87890	17.61000	16.01410	HepG2	HNRNPC
TBC1D4	ENSG00000136111.8	2391.07520	1964.46310	0.28340	2.37910	1.71050	HepG2	HNRNPF
TBC1D4	ENSG00000136111.8	3063.42460	3712.87920	-0.27740	5.55750	4.63160	HepG2	HNRNPL
TBC1D4	ENSG00000136111.8	1568.76650	2354.17610	-0.58560	9.12770	7.57080	HepG2	HNRNPM
TBC1D4	ENSG00000136111.8	1849.20610	2959.05290	-0.67820	20.96160	19.39940	HepG2	HNRNPU
TBC1D4	ENSG00000136111.8	2250.15770	3813.29280	-0.76100	11.12680	9.86860	HepG2	IGF2BP2
TBC1D4	ENSG00000136111.8	2307.77000	3022.57910	-0.38930	10.21770	8.89950	HepG2	ILF2
TBC1D4	ENSG00000136111.8	2365.72730	3407.67390	-0.52650	3.59730	2.06210	HepG2	ILF3
TBC1D4	ENSG00000136111.8	3766.85130	3116.00700	0.27360	5.63050	4.19120	HepG2	KIF1C
TBC1D4	ENSG00000136111.8	2483.58820	4239.33790	-0.77140	8.46950	7.01080	HepG2	LARP4
TBC1D4	ENSG00000136111.8	1649.90550	2946.94620	-0.83680	12.08290	9.70710	HepG2	LIN28B
TBC1D4	ENSG00000136111.8	2258.19020	4045.81940	-0.84130	12.91810	11.54000	HepG2	MAGOH
TBC1D4	ENSG00000136111.8	2790.33320	4068.39380	-0.54400	5.30500	4.45600	HepG2	MATR3
TBC1D4	ENSG00000136111.8	1497.38970	2761.42430	-0.88300	19.49130	17.59790	HepG2	MSI2
TBC1D4	ENSG00000136111.8	2008.01790	4164.17070	-1.05230	18.67280	17.12250	HepG2	NCBP2
TBC1D4	ENSG00000136111.8	3113.12810	4041.49970	-0.37650	5.17450	4.13700	HepG2	NOL12
TBC1D4	ENSG00000136111.8	1987.81490	1467.48080	0.43770	4.17320	3.25940	HepG2	NSUN2
TBC1D4	ENSG00000136111.8	1415.53500	3194.67750	-1.17430	11.48910	9.65110	HepG2	PABPC1
TBC1D4	ENSG00000136111.8	2378.73610	3708.20570	-0.64050	7.71920	6.52920	HepG2	PABPC4
TBC1D4	ENSG00000136111.8	2471.61410	2928.98910	-0.24490	3.23530	2.32630	HepG2	PARN
TBC1D4	ENSG00000136111.8	1503.34630	1850.81880	-0.30000	2.93450	1.66450	HepG2	PKM
TBC1D4	ENSG00000136111.8	2170.27970	3134.58100	-0.53040	3.08950	1.48230	HepG2	PNPT1
TBC1D4	ENSG00000136111.8	2104.39820	3436.93900	-0.70770	5.66230	3.96910	HepG2	PRPF6
TBC1D4	ENSG00000136111.8	2253.68030	3857.81700	-0.77550	16.36260	15.07790	HepG2	PUF60
TBC1D4	ENSG00000136111.8	3064.68990	4092.18620	-0.41710	5.11200	4.21390	HepG2	PUM2
TBC1D4	ENSG00000136111.8	2823.70250	3471.89450	-0.29810	5.54610	4.72950	HepG2	PUS1
TBC1D4	ENSG00000136111.8	4268.99720	3155.21820	0.43610	2.10930	1.48770	HepG2	RAVER1
TBC1D4	ENSG00000136111.8	1861.74990	4367.56560	-1.23020	56.62490	54.87580	HepG2	RBM22
TBC1D4	ENSG00000136111.8	1460.56060	2747.49370	-0.91160	13.12460	10.89010	HepG2	RCC2
TBC1D4	ENSG00000136111.8	1874.24060	4131.85950	-1.14050	56.81690	55.11340	HepG2	NELFE
TBC1D4	ENSG00000136111.8	3348.83940	3848.41070	-0.20060	2.52550	1.93300	HepG2	RECQL
TBC1D4	ENSG00000136111.8	1705.31410	2116.62620	-0.31170	2.54470	1.88530	HepG2	RPLP0
TBC1D4	ENSG00000136111.8	861.44930	2177.71620	-1.33800	38.41350	36.58720	HepG2	RPS19
TBC1D4	ENSG00000136111.8	1682.47310	3120.58420	-0.89120	13.82960	12.13880	HepG2	RPS2
TBC1D4	ENSG00000136111.8	2432.43360	3509.10180	-0.52870	3.99120	3.02910	HepG2	RPS3A
TBC1D4	ENSG00000136111.8	2301.23690	2635.18320	-0.19550	2.54870	1.92580	HepG2	SAFB2
TBC1D4	ENSG00000136111.8	1362.21520	2185.70830	-0.68210	8.81530	7.15760	HepG2	SERBP1
TBC1D4	ENSG00000136111.8	2675.72000	3392.64080	-0.34250	2.02170	1.44370	HepG2	SF3A3
TBC1D4	ENSG00000136111.8	4707.30770	3698.68890	0.34780	4.76210	3.88040	HepG2	SLBP
TBC1D4	ENSG00000136111.8	1766.57490	3073.09540	-0.79870	37.62690	35.73760	HepG2	SMN1
TBC1D4	ENSG00000136111.8	3155.85360	1822.52010	0.79200	2.93200	2.12610	HepG2	SNRNP70
TBC1D4	ENSG00000136111.8	2878.70320	4933.05440	-0.77710	35.25130	33.99220	HepG2	SRFBP1
TBC1D4	ENSG00000136111.8	2830.24550	2024.59640	0.48320	4.62710	2.61590	HepG2	SRP68
TBC1D4	ENSG00000136111.8	2858.89940	4034.59030	-0.49700	13.74200	12.86050	HepG2	SRSF1
TBC1D4	ENSG00000136111.8	4617.59980	3282.41480	0.49230	14.50630	13.42220	HepG2	SRSF9
TBC1D4	ENSG00000136111.8	1850.95060	4283.14600	-1.21040	70.25920	68.56000	HepG2	SSB
TBC1D4	ENSG00000136111.8	1579.32760	2278.94250	-0.52910	3.91360	2.46310	HepG2	STAU1
TBC1D4	ENSG00000136111.8	2774.07550	4331.86070	-0.64300	22.13300	20.64640	HepG2	SUCLG1
TBC1D4	ENSG00000136111.8	1788.36370	2303.91800	-0.36540	3.84760	2.75010	HepG2	SUPT6H
TBC1D4	ENSG00000136111.8	1177.16800	2116.06510	-0.84610	10.31240	9.14330	HepG2	SUPV3L1
TBC1D4	ENSG00000136111.8	3119.03590	3626.64260	-0.21750	2.39240	1.86480	HepG2	TAF15
TBC1D4	ENSG00000136111.8	2274.00850	1613.37980	0.49510	3.68720	2.86570	HepG2	TARDBP
TBC1D4	ENSG00000136111.8	4183.19490	3332.18300	0.32800	4.03300	3.02930	HepG2	TIA1
TBC1D4	ENSG00000136111.8	1239.63140	2875.37280	-1.21380	41.28030	39.76930	HepG2	TIAL1
TBC1D4	ENSG00000136111.8	4721.65290	3768.64040	0.32510	3.55900	2.55510	HepG2	TUFM
TBC1D4	ENSG00000136111.8	2388.64690	2918.85780	-0.28920	2.23150	1.66180	HepG2	U2AF1
TBC1D4	ENSG00000136111.8	1578.15980	1250.06060	0.33610	2.47850	1.75970	HepG2	UCHL5
TBC1D4	ENSG00000136111.8	2033.42830	3008.76020	-0.56530	15.99780	14.58780	HepG2	UPF1
TBC1D4	ENSG00000136111.8	1225.95810	1937.80570	-0.66050	4.57630	3.26730	HepG2	UPF2
TBC1D4	ENSG00000136111.8	1766.75560	2904.82980	-0.71740	23.08330	21.60210	HepG2	UTP3
TBC1D4	ENSG00000136111.8	2030.41100	3469.65640	-0.77300	7.26880	5.61820	HepG2	XRCC6
TBC1D4	ENSG00000136111.8	1141.93750	2083.03240	-0.86720	12.19430	10.69580	HepG2	XRN2
TBC1D4	ENSG00000136111.8	1975.34690	2320.84790	-0.23250	3.25790	2.53930	HepG2	ZC3H8
TBC1D4	ENSG00000136111.8	564.99180	460.70610	0.29430	1.88890	1.40280	K562	AGGF1
TBC1D4	ENSG00000136111.8	378.43970	790.71910	-1.06310	13.97610	12.80090	K562	AQR
TBC1D4	ENSG00000136111.8	222.58020	338.36090	-0.60420	3.19890	2.25990	K562	BOP1
TBC1D4	ENSG00000136111.8	431.35080	598.73630	-0.47310	2.79070	1.35200	K562	CKAP4
TBC1D4	ENSG00000136111.8	389.37670	590.69310	-0.60120	2.76880	1.70630	K562	CNOT7
TBC1D4	ENSG00000136111.8	258.23010	359.77180	-0.47840	2.64420	1.87600	K562	CPSF6
TBC1D4	ENSG00000136111.8	278.71210	395.61700	-0.50530	2.24850	1.42620	K562	EFTUD2
TBC1D4	ENSG00000136111.8	443.87810	621.35690	-0.48530	4.45140	3.56660	K562	EIF2S2
TBC1D4	ENSG00000136111.8	364.22140	515.02060	-0.49980	3.29440	2.36470	K562	FIP1L1
TBC1D4	ENSG00000136111.8	183.59660	366.06480	-0.99560	8.12240	6.60820	K562	FMR1
TBC1D4	ENSG00000136111.8	179.48300	310.27540	-0.78970	4.72530	3.50030	K562	FTO
TBC1D4	ENSG00000136111.8	583.44070	429.20970	0.44280	3.50710	2.83790	K562	FXR1
TBC1D4	ENSG00000136111.8	356.90960	512.70060	-0.52260	4.38930	2.95630	K562	GLRX3
TBC1D4	ENSG00000136111.8	177.03200	343.49130	-0.95630	7.49150	6.18290	K562	GPKOW
TBC1D4	ENSG00000136111.8	472.54350	828.05960	-0.80930	9.69090	8.25260	K562	GRSF1
TBC1D4	ENSG00000136111.8	168.14250	399.72620	-1.24930	12.45130	11.25990	K562	HNRNPC
TBC1D4	ENSG00000136111.8	243.01970	356.88620	-0.55440	3.10990	1.89450	K562	HNRNPF
TBC1D4	ENSG00000136111.8	433.99960	698.24230	-0.68600	6.35780	5.16590	K562	HSPD1
TBC1D4	ENSG00000136111.8	235.78390	335.28680	-0.50790	2.64730	1.79480	K562	METAP2
TBC1D4	ENSG00000136111.8	749.33550	1039.04740	-0.47160	3.78450	2.46710	K562	MSI2
TBC1D4	ENSG00000136111.8	357.61570	539.03390	-0.59200	6.04290	4.88530	K562	MTPAP
TBC1D4	ENSG00000136111.8	421.69750	598.93710	-0.50620	5.00120	4.03860	K562	NSUN2
TBC1D4	ENSG00000136111.8	327.21560	567.48390	-0.79430	4.72050	3.07300	K562	PABPC1
TBC1D4	ENSG00000136111.8	385.74490	584.66690	-0.60000	4.72760	3.61310	K562	PPIG
TBC1D4	ENSG00000136111.8	247.09260	358.37700	-0.53640	2.55550	1.69200	K562	PSIP1
TBC1D4	ENSG00000136111.8	867.08550	1108.44300	-0.35430	3.41470	2.34670	K562	PUM2
TBC1D4	ENSG00000136111.8	319.25630	514.50030	-0.68850	5.89990	4.61380	K562	RBM22
TBC1D4	ENSG00000136111.8	434.15940	590.96530	-0.44480	3.78980	2.84390	K562	SF3A3
TBC1D4	ENSG00000136111.8	495.43270	345.37430	0.52040	3.91990	2.94150	K562	SYNCRIP
TBC1D4	ENSG00000136111.8	339.90700	532.26390	-0.64700	5.04940	4.07850	K562	TARDBP
TBC1D4	ENSG00000136111.8	241.62610	366.10540	-0.59950	3.67180	2.55240	K562	TRIM56
TBC1D4	ENSG00000136111.8	453.58880	635.06400	-0.48550	4.98040	4.04720	K562	UPF1
TBC1D4	ENSG00000136111.8	347.22910	525.69960	-0.59840	3.88250	2.44890	K562	UTP3
TBC1D4	ENSG00000136111.8	365.34720	543.40700	-0.57280	4.82910	3.65530	K562	WDR3
TBC1D4	ENSG00000136111.8	586.19320	890.80240	-0.60370	6.29650	4.90790	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TBC1D4 is not available on ENCORE database.

6 RBPs can affect the splicing of TBC1D4 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TBC1D4	ENSG00000136111.8	chr13	-	75915260	75915371			75911056	75911176	75915631	75915723	-0.52200	0.00000	0.00000	excluded	K562	SF3B4
SE	TBC1D4	ENSG00000136111.8	chr13	-	75901887	75901962			75900332	75900559	75911056	75911176	-0.05400	0.00012	0.00227	excluded	HepG2	U2AF2
SE	TBC1D4	ENSG00000136111.8	chr13	-	75880448	75880607			75876378	75876537	75884077	75884287	-0.07900	0.00001	0.00016	excluded	HepG2	U2AF2
SE	TBC1D4	ENSG00000136111.8	chr13	-	75898372	75898537			75886873	75887034	75900332	75900559	0.29000	0.00246	0.03565	included	K562	PUS1
SE	TBC1D4	ENSG00000136111.8	chr13	-	75915260	75915371			75911056	75911176	75915631	75915723	-0.12200	0.00277	0.06722	excluded	HepG2	SF3A3
SE	TBC1D4	ENSG00000136111.8	chr13	-	75915260	75915371			75911056	75911176	75915631	75915723	-0.25700	0.00000	0.00000	excluded	HepG2	SF3B4
MXE	TBC1D4	ENSG00000136111.8	chr13	-	75876378	75876537	75880448	75880607	75873465	75873710	75884077	75884287	-0.17000	0.00009	0.06421	2included	HepG2	GRSF1
MXE	TBC1D4	ENSG00000136111.8	chr13	-	75876378	75876537	75880448	75880607	75873465	75873710	75884077	75884287	-0.13400	0.00112	0.06777	2included	HepG2	G3BP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TBC1D4

General Information

Functions

Localization

Domains (AlphaFold: TBC1D4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TBC1D4 is not avaliable on ENCORE database.

41 proteins are bound to TBC1D4 RNA:

eCLIP assay for TBC1D4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TBC1D4 is not available on ENCORE database.

123 RBPs can affect the gene expression of TBC1D4 :

The Knockdown/knockout RNA-Seq assay for TBC1D4 is not available on ENCORE database.

6 RBPs can affect the splicing of TBC1D4 :

The Knockdown/knockout RNA-Seq assay for TBC1D4 is not avaliable on ENCORE database.