PVRL3

General Information

Gene Name       : PVRL3
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PVRL3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PVRL3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PVRL3 RNA is bound by 8 proteins.  







eCLIP assay for PVRL3 is not avaliable on ENCORE database.





8 proteins are bound to PVRL3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3110853031110853084+3'-UTR,CDS,intron-Distal3.359823.57857HepG2BCLAF1
chr3110790843110790922+5'-UTR,CDS,intron-Distal5.5542521.22010HepG2DDX3X
chr3110790836110790907+5'-UTR,CDS,intron-Distal4.462684.55101HepG2PRPF4
chr3110790741110790787+5'-UTR,intron-Distal4.3267410.34792HepG2DDX3X
chr3110790844110790921+5'-UTR,CDS,intron-Distal4.359703.85108HepG2GTF2F1
chr3110790632110790741+5'-UTR,intron-Distal4.9385343.48166HepG2DDX3X
chr3110841036110841090+CDS,intron-Proximal4.567343.89826HepG2BCLAF1
chr3110845131110845180+CDS3.831444.62153HepG2LIN28B
chr3110863446110863496+intron-Distal4.995605.51162HepG2U2AF2
chr3110915972110916025+intron-Distal3.895843.57526HepG2IGF2BP1
chr3110917424110917599+intron-Distal4.102053.83024HepG2IGF2BP1
chr3110919951110920050+intron-Distal4.771575.29571HepG2FUBP3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PVRL3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PVRL3 is not available on ENCORE database.

  • 39 RBPs can affect the levels of PVRL3.  








The Knockdown/knockout RNA-Seq assay for PVRL3 is not available on ENCORE database.





39 RBPs can affect the gene expression of PVRL3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PVRL3ENSG00000177707.6223.59040397.86720-0.831404.161103.01480HepG2BCCIP
PVRL3ENSG00000177707.6239.16390515.99400-1.109409.142508.13250HepG2BOP1
PVRL3ENSG00000177707.6703.85420490.000000.522403.763302.87090HepG2CIRBP
PVRL3ENSG00000177707.61015.12020537.947100.916006.077404.65350HepG2DDX59
PVRL3ENSG00000177707.6289.63330398.30590-0.459602.637601.67820HepG2DHX30
PVRL3ENSG00000177707.6245.19400412.98010-0.752106.990005.91300HepG2DNAJC21
PVRL3ENSG00000177707.6705.77570550.173900.359202.748501.91400HepG2EIF4G1
PVRL3ENSG00000177707.6244.95490474.50390-0.953903.724002.54020HepG2FTO
PVRL3ENSG00000177707.6359.08550510.02600-0.506202.863602.18720HepG2G3BP1
PVRL3ENSG00000177707.6763.06550541.402000.495003.498102.49030HepG2G3BP2
PVRL3ENSG00000177707.6475.59780274.142700.794706.412105.05090HepG2GEMIN5
PVRL3ENSG00000177707.6656.71360516.347400.346801.932301.34320HepG2HNRNPK
PVRL3ENSG00000177707.6358.97150470.57350-0.390603.034902.26990HepG2ILF2
PVRL3ENSG00000177707.6765.60620467.367200.711903.675002.22810HepG2KRR1
PVRL3ENSG00000177707.6761.71930553.043000.461802.746902.11770HepG2MATR3
PVRL3ENSG00000177707.6298.18430439.47470-0.559602.288901.49600HepG2PABPC1
PVRL3ENSG00000177707.6588.86460456.018500.368702.872702.01050HepG2PARN
PVRL3ENSG00000177707.6479.71840381.226800.331402.209501.51140HepG2PRPF4
PVRL3ENSG00000177707.6770.90150536.839400.522002.688201.48470HepG2PRPF6
PVRL3ENSG00000177707.6171.11440301.90390-0.819104.007903.05860HepG2PRPF8
PVRL3ENSG00000177707.6323.48200488.93910-0.596003.410402.74460HepG2PUS1
PVRL3ENSG00000177707.6625.67100466.439800.423603.026602.32520HepG2RBM25
PVRL3ENSG00000177707.6751.03670491.900600.610407.543006.59880HepG2RECQL
PVRL3ENSG00000177707.6386.24720558.06090-0.530902.781202.09650HepG2RPLP0
PVRL3ENSG00000177707.6641.25040494.058300.376102.958902.35120HepG2SF3B4
PVRL3ENSG00000177707.6623.32350506.134600.300402.202201.56460HepG2SLBP
PVRL3ENSG00000177707.6312.92080478.46000-0.612604.771003.96430HepG2SMN1
PVRL3ENSG00000177707.6547.01850717.86000-0.392101.992001.54570HepG2SRFBP1
PVRL3ENSG00000177707.6540.90220372.610400.537603.687901.82820HepG2SRP68
PVRL3ENSG00000177707.6712.18140515.698600.465604.570604.00070HepG2SRSF1
PVRL3ENSG00000177707.6734.55470521.200800.494905.199304.38270HepG2SRSF5
PVRL3ENSG00000177707.6834.08230592.767800.492606.090405.23300HepG2SUCLG1
PVRL3ENSG00000177707.6573.21210463.554300.306201.956201.47050HepG2TAF15
PVRL3ENSG00000177707.6638.61220499.420000.354602.082401.44110HepG2TARDBP
PVRL3ENSG00000177707.6566.85580425.917500.412303.009102.14220HepG2TIA1
PVRL3ENSG00000177707.6249.97740447.70750-0.840808.373907.58950HepG2TIAL1
PVRL3ENSG00000177707.6151.09830230.08340-0.606702.399101.69190HepG2UCHL5
PVRL3ENSG00000177707.6483.03500591.39020-0.292002.081801.46130HepG2UPF1
PVRL3ENSG00000177707.6803.85490650.416800.305503.013102.44970HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PVRL3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of PVRL3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PVRL3 is not avaliable on ENCORE database.