FAR1

General Information

Gene Name       : FAR1
Gene ID             : ENSG00000197601.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAR1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FAR1ENSG00000197601.1234.5628.0031.28ENCSR000AEF
HepG2FAR1ENSG00000197601.120.550.290.42ENCSR985KAT
K562FAR1ENSG00000197601.1244.5445.5045.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAR1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAR1 RNA is bound by 27 proteins.  







eCLIP assay for FAR1 is not avaliable on ENCORE database.





27 proteins are bound to FAR1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr111375295013753019+3'-UTR3.9092710.18902K562ZC3H11A
chr111375047913750542+3'-UTR3.346533.84340K562CSTF2T
chr111375278513752845+3'-UTR3.049928.60998K562ZC3H11A
chr111375033013750417+3'-UTR3.9561314.37096K562PUM2
chr111375272613752785+3'-UTR4.1525412.01948K562ZC3H11A
chr111371630313716373+3'-UTR,5'-UTR,CDS,intron-Proximal3.442057.21479K562UCHL5
chr111375038313750453+3'-UTR4.231004.11729K562CPSF6
chr111375290013752950+3'-UTR4.030586.67285K562ZC3H11A
chr111375040213750452+3'-UTR3.959514.10408K562KHSRP
chr111371630513716376+3'-UTR,5'-UTR,CDS,intron-Proximal3.079419.44659K562ZNF622
chr111375094313751024+3'-UTR4.537975.20509K562YBX3
chr111374170913741774+5'-UTR,intron-Distal3.661184.41411K562TARDBP
chr111369027913690354+5'-UTR,intron-Proximal3.083276.50677K562UCHL5
chr111374183013741908+5'-UTR,intron-Distal4.958367.52645K562TARDBP
chr111369025813690353+5'-UTR3.1698010.59917K562DDX3X
chr111374317013743231+5'-UTR,intron-Distal,intron-Proximal3.849668.26817K562KHSRP
chr111374321913743317+5'-UTR,CDS,intron-Proximal4.148805.37841K562SF3B4
chr111374221913742269+5'-UTR,intron-Distal3.905377.42414K562U2AF2
chr111374332013743407+CDS,intron-Proximal4.297084.48994K562RBM15
chr111371637013716439+CDS3.938373.66349K562LIN28B
chr111375011513750187+CDS,intron-Proximal3.999115.02403K562SF3B4
chr111373461213734643+CDS,intron-Proximal,polyA_site3.270073.57533K562KHSRP
chr111374916413749231+CDS,intron-Proximal3.063415.98642K562DDX24
chr111373241013732487+CDS,intron-Proximal4.308248.27931K562AQR
chr111373621613736310+CDS,intron-Proximal3.9518314.86179K562KHSRP
chr111373622513736293+CDS,intron-Proximal4.395796.48405K562AQR
chr111372942413729523+CDS,intron-Proximal5.035498.32289K562U2AF2
chr111374334413743407+CDS,intron-Proximal3.851886.84505K562ZNF622
chr111375015813750183+CDS,intron-Proximal4.098036.95786K562UCHL5
chr111373325413733357+CDS,intron-Proximal3.237854.33878K562GPKOW
chr111372943013729498+CDS,intron-Proximal3.998023.33054K562U2AF1
chr111373342113733509+CDS,intron-Proximal3.190867.06369K562EFTUD2
chr111373459213734647+CDS,intron-Proximal,polyA_site3.274483.14650K562TIA1
chr111372198613722035+CDS4.899845.94412K562ZNF622
chr111373327613733328+CDS,intron-Proximal3.636865.83621K562AQR
chr111374910213749232+CDS,intron-Proximal3.5348721.42347K562ZNF622
chr111373342113733507+CDS,intron-Proximal4.227754.42765K562SF3B4
chr111375011313750182+CDS,intron-Proximal4.120284.68890K562SMNDC1
chr111374912713749231+CDS,intron-Proximal3.4704717.16618K562UCHL5
chr111372333013723425+intron-Distal3.797993.39716K562U2AF2
chr111372377213723839+intron-Distal4.4531315.17269K562KHSRP
chr111369088913690963+intron-Distal4.888067.75663K562CSTF2T
chr111369062913690734+intron-Distal5.152388.23441K562GTF2F1
chr111372830313728398+intron-Distal3.111097.80112K562KHSRP
chr111373631013736369+intron-Distal,intron-Proximal4.469394.96013K562PRPF8
chr111372840513728503+intron-Distal3.590474.85520K562U2AF2
chr111372286013722892+intron-Distal3.896565.32884K562KHSRP
chr111373631013736335+intron-Distal,intron-Proximal5.3748715.75253K562KHSRP
chr111373633513736366+intron-Distal4.5597212.49723K562KHSRP
chr111372212713722185+intron-Distal,intron-Proximal4.509875.43878K562TIA1
chr111372280013722860+intron-Distal3.590318.44889K562KHSRP
chr111372374913723772+intron-Distal4.212628.47371K562KHSRP
chr111372372313723749+intron-Distal5.264416.51328K562KHSRP
chr111372402313724068+intron-Distal4.829884.38664K562QKI
chr111373649213736618+intron-Distal3.762185.54413K562U2AF2
chr111373643113736502+intron-Distal4.5377214.75316K562KHSRP
chr111373638313736412+intron-Distal3.415357.36496K562KHSRP
chr111373641213736431+intron-Distal4.5592816.23757K562KHSRP
chr111369041013690466+intron-Distal,intron-Proximal3.777433.37414K562CSTF2T
chr111373464713734724+intron-Distal,intron-Proximal4.251584.00100K562TIA1
chr111372843013728497+intron-Distal3.612046.73042K562U2AF1
chr111373065813730729+intron-Distal3.139603.26015K562PTBP1
chr111372369513723723+intron-Distal4.4303610.80633K562KHSRP
chr111374991213749971+intron-Distal4.424698.11138K562KHSRP
chr111372364913723695+intron-Distal3.372627.46568K562KHSRP
chr111372742413727482+intron-Distal3.869943.06617K562HNRNPK
chr111373625513736309+intron-Proximal3.528374.52122K562RBM22
chr111373243513732465+intron-Proximal3.495624.48980K562PRPF8
chr111372938513729435+intron-Proximal5.3566511.52732K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAR1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAR1 is not available on ENCORE database.

  • 72 RBPs can affect the levels of FAR1.  








The Knockdown/knockout RNA-Seq assay for FAR1 is not available on ENCORE database.





72 RBPs can affect the gene expression of FAR1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAR1ENSG00000197601.849.4574016.828701.555203.260702.43040HepG2CALR
FAR1ENSG00000197601.853.9524018.479601.545703.112102.38810HepG2CPSF6
FAR1ENSG00000197601.879.6650035.989501.146303.668102.83420HepG2DAZAP1
FAR1ENSG00000197601.860.5732026.569801.188802.791402.11150HepG2DKC1
FAR1ENSG00000197601.853.9832012.579002.101403.412102.70130HepG2DNAJC2
FAR1ENSG00000197601.8119.1174036.774701.695507.456606.40680HepG2EIF4A3
FAR1ENSG00000197601.854.4732018.505901.557502.530401.56150HepG2FTO
FAR1ENSG00000197601.868.3126023.453001.542303.727902.10160HepG2HLTF
FAR1ENSG00000197601.859.0209012.806702.204205.580504.70690HepG2HNRNPA1
FAR1ENSG00000197601.836.9564014.247101.375101.987501.38920HepG2HNRNPC
FAR1ENSG00000197601.853.2668014.152701.912105.261404.44630HepG2HNRNPU
FAR1ENSG00000197601.888.8308038.221201.216603.497102.78930HepG2NCBP2
FAR1ENSG00000197601.82.3023014.87290-2.691602.281801.49010HepG2PABPC1
FAR1ENSG00000197601.8104.4401034.024301.617906.485305.39200HepG2PABPC4
FAR1ENSG00000197601.895.3754033.760001.498205.737404.91440HepG2PCBP1
FAR1ENSG00000197601.875.8095034.340501.142402.866602.31160HepG2PTBP1
FAR1ENSG00000197601.880.8395028.289001.514705.473504.66040HepG2PUS1
FAR1ENSG00000197601.885.7756040.899101.068402.931902.40280HepG2RBM22
FAR1ENSG00000197601.894.3305033.766801.482005.133004.24050HepG2RBM25
FAR1ENSG00000197601.871.5272027.691701.368903.168902.31180HepG2RPS2
FAR1ENSG00000197601.854.2330016.329501.731603.990503.02860HepG2RPS3A
FAR1ENSG00000197601.884.3862040.097501.073403.327302.77600HepG2SSB
FAR1ENSG00000197601.849.6159019.472501.349302.710101.99190HepG2TARDBP
FAR1ENSG00000197601.81771.384102577.11330-0.5409010.667008.05510K562BCCIP
FAR1ENSG00000197601.82116.553402490.26440-0.234602.894801.91450K562BCLAF1
FAR1ENSG00000197601.81403.234402002.50000-0.513005.299804.08160K562BOP1
FAR1ENSG00000197601.8594.06860923.74180-0.636904.550403.12630K562CCAR1
FAR1ENSG00000197601.81769.769902509.96530-0.504103.225301.64960K562CKAP4
FAR1ENSG00000197601.82364.790803583.96720-0.5998014.6222012.17180K562CPEB4
FAR1ENSG00000197601.81689.016902129.20640-0.334103.425202.55000K562CPSF6
FAR1ENSG00000197601.86993.613406065.907600.205202.381301.47860K562CELF1
FAR1ENSG00000197601.8558.69220973.31440-0.800905.311802.79070K562DDX1
FAR1ENSG00000197601.81829.608402183.75890-0.255302.982701.60310K562DDX27
FAR1ENSG00000197601.81873.295802477.41170-0.403302.733201.69720K562DDX3X
FAR1ENSG00000197601.82631.574103708.49120-0.4949011.6632010.42490K562DDX47
FAR1ENSG00000197601.8783.309301034.07540-0.400702.926401.55490K562DHX30
FAR1ENSG00000197601.8769.59570993.35620-0.368202.711901.38490K562DNAJC21
FAR1ENSG00000197601.82178.097202721.32360-0.321203.569302.17670K562EIF2S1
FAR1ENSG00000197601.82006.810102769.40860-0.464707.387906.29480K562EIF2S2
FAR1ENSG00000197601.81811.389902504.51700-0.467407.939606.59780K562EIF3G
FAR1ENSG00000197601.81687.297502588.32130-0.617308.923707.44870K562EIF4A3
FAR1ENSG00000197601.81762.483802330.95960-0.403305.679603.93330K562EIF4B
FAR1ENSG00000197601.81592.118702491.95750-0.646309.273007.62150K562FIP1L1
FAR1ENSG00000197601.81542.082402166.46670-0.490505.181004.00530K562FMR1
FAR1ENSG00000197601.81320.521401836.29750-0.475704.346403.17580K562FTO
FAR1ENSG00000197601.84266.789002917.669400.548203.017702.27350K562G3BP2
FAR1ENSG00000197601.81328.931202032.84760-0.613208.608507.20100K562GPKOW
FAR1ENSG00000197601.81732.734403690.74770-1.0909020.7118018.53950K562GRSF1
FAR1ENSG00000197601.81186.960901928.48060-0.7002011.2512010.11620K562HNRNPC
FAR1ENSG00000197601.81354.288201721.96250-0.346503.092001.87970K562HNRNPF
FAR1ENSG00000197601.82389.402303351.47670-0.488106.852805.11590K562HNRNPL
FAR1ENSG00000197601.82471.168203378.61870-0.451205.159704.08900K562HSPD1
FAR1ENSG00000197601.81425.666801955.55020-0.455904.139302.27160K562LIN28B
FAR1ENSG00000197601.81370.839301984.29480-0.533606.925005.50690K562METAP2
FAR1ENSG00000197601.81782.346902409.57750-0.435008.806007.43910K562MTPAP
FAR1ENSG00000197601.84038.073102770.754200.543302.178701.41680K562NAA15
FAR1ENSG00000197601.82219.933402677.13720-0.270205.259604.27780K562NSUN2
FAR1ENSG00000197601.81817.463302828.80990-0.638309.029407.32900K562PPIG
FAR1ENSG00000197601.81049.170001729.03670-0.720707.092905.52640K562PSIP1
FAR1ENSG00000197601.84463.363505610.43960-0.330005.008103.70150K562PUM2
FAR1ENSG00000197601.85223.327803297.392500.663508.474307.57190K562PUS1
FAR1ENSG00000197601.84150.263403212.929500.369205.954105.11140K562RBM15
FAR1ENSG00000197601.82190.207903265.50550-0.576205.200604.00600K562RBM22
FAR1ENSG00000197601.82473.484503182.60580-0.363702.957001.50920K562RBM34
FAR1ENSG00000197601.81234.456101577.28990-0.353603.413702.31510K562RCC2
FAR1ENSG00000197601.81575.918002073.97460-0.396202.569801.78360K562RPS19
FAR1ENSG00000197601.81236.610801954.97740-0.660807.368005.63210K562RPS3
FAR1ENSG00000197601.82117.168503014.72960-0.509903.012801.42230K562SBDS
FAR1ENSG00000197601.81596.774202641.82940-0.7264018.4134016.45980K562SF3A3
FAR1ENSG00000197601.82286.032303035.73100-0.409204.169303.11410K562SF3B4
FAR1ENSG00000197601.81039.684601495.25270-0.524205.614704.00330K562SRFBP1
FAR1ENSG00000197601.81224.178301887.54710-0.624706.671204.91280K562SRSF4
FAR1ENSG00000197601.81922.623503378.17660-0.813209.342807.93210K562TARDBP
FAR1ENSG00000197601.82523.524203258.53570-0.368802.649101.84940K562TIA1
FAR1ENSG00000197601.81123.910101663.07230-0.565305.465504.10610K562TIAL1
FAR1ENSG00000197601.81373.023401766.54020-0.363603.286602.23650K562TRIM56
FAR1ENSG00000197601.83816.803202922.366200.385105.442104.32020K562U2AF2
FAR1ENSG00000197601.82424.691202838.63480-0.227403.051602.29820K562UPF1
FAR1ENSG00000197601.81593.526702124.24700-0.414703.438202.04120K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAR1 is not available on ENCORE database.





10 RBPs can affect the splicing of FAR1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFAR1ENSG00000197601.8chr11+1373734713737445137360551373622713743276137434060.062000.000660.01485includedK562SRSF1
SEFAR1ENSG00000197601.8chr11+137333101373335513732270137324171373347413733593-0.336000.000000.00000excludedK562SRSF1
SEFAR1ENSG00000197601.8chr11+137322391373241713729446137296261373451213734580-0.129000.000000.00000excludedK562AQR
SEFAR1ENSG00000197601.8chr11+137360301373622713734449137345801374327613743507-0.094000.000910.01129excludedK562AQR
SEFAR1ENSG00000197601.8chr11+137333101373335513732239137324171373347413733593-0.125000.000000.00004excludedK562PUS1
SEFAR1ENSG00000197601.8chr11+137333101373335513732197137324171373347413733602-0.101000.002430.04093excludedK562U2AF2
SEFAR1ENSG00000197601.8chr11+137333101373335513732270137324171373347413733593-0.115000.000020.00170excludedK562TARDBP
SEFAR1ENSG00000197601.8chr11+137333101373335513732239137324171373347413733593-0.067000.000360.01213excludedK562RBM15
SEFAR1ENSG00000197601.8chr11+137333101373335513732239137324171373347413733593-0.060000.001580.03947excludedK562AGGF1
A5SSFAR1ENSG00000197601.8chr11+137334741373360213733474137335931373451213734580-0.073000.000120.06695shorterK562PPIL4
MXEFAR1ENSG00000197601.8chr11+1373605513736227137365221373667913734512137345801374327613743406-0.157000.000000.000002includedK562U2AF1
MXEFAR1ENSG00000197601.8chr11+1373331013733355137334741373360213732270137324171373451213734580-0.117000.000180.005342includedK562PUS1
MXEFAR1ENSG00000197601.8chr11+1373331013733355137334741373360213732270137324171373451213734580-0.262000.000000.000002includedK562SRSF1
MXEFAR1ENSG00000197601.8chr11+1373331013733355137334741373359313732239137324171373451213734580-0.249000.000000.000032includedK562SRSF1
MXEFAR1ENSG00000197601.8chr11+1373605513736227137365221373667913734512137345801373734713737390-0.076000.005220.068352includedK562SRSF1
MXEFAR1ENSG00000197601.8chr11+1373605513736227137365221373667913734512137345801374327613743406-0.087000.000010.000262includedK562SRSF1
MXEFAR1ENSG00000197601.8chr11+1373605513736227137365221373669213734512137345801374327613743406-0.057000.000430.010002includedK562SRSF1
MXEFAR1ENSG00000197601.8chr11+13733261137333551373345013733593137322391373241713734512137346310.067000.000000.000061includedK562AQR
MXEFAR1ENSG00000197601.8chr11+13733261137333551373347413733593137322391373241713734512137346310.063000.000010.000091includedK562AQR
MXEFAR1ENSG00000197601.8chr11+13732197137324171373331013733355137294461372962613733474137335930.108000.000030.000431includedK562AQR
MXEFAR1ENSG00000197601.8chr11+13733279137333551373345013733593137322391373241713734512137346310.089000.000000.000001includedK562AQR
MXEFAR1ENSG00000197601.8chr11+13733279137333551373347413733593137322391373241713734512137346310.085000.000000.000001includedK562AQR
MXEFAR1ENSG00000197601.8chr11+13733310137333551373347413733593137294461372962613734512137346310.064000.000090.001081includedK562AQR
MXEFAR1ENSG00000197601.8chr11+13729446137296261373223913732417137218631372203913733310137333550.103000.015620.090501includedK562AQR
MXEFAR1ENSG00000197601.8chr11+13733186137333551373347413733593137322391373241713734512137345800.062000.000010.000101includedK562AQR
MXEFAR1ENSG00000197601.8chr11+13733186137333551373345013733593137322391373241713734512137345800.065000.000000.000061includedK562AQR
MXEFAR1ENSG00000197601.8chr11+1373223913732417137345121373457113729446137296261374327613743406-0.065000.000000.000032includedK562AQR
MXEFAR1ENSG00000197601.8chr11+1373331013733355137334741373360213732270137324171373451213734580-0.069000.000100.001232includedK562AQR
MXEFAR1ENSG00000197601.8chr11+1373603013736227137365221373669213734449137345801374327613743406-0.057000.002080.017162includedK562AQR
MXEFAR1ENSG00000197601.8chr11+1373605513736227137365221373669213734512137345801374327613743406-0.139000.000000.000002includedK562U2AF2
MXEFAR1ENSG00000197601.8chr11+1373605513736227137365221373667913734512137345801374327613743406-0.149000.000000.000002includedK562U2AF2
MXEFAR1ENSG00000197601.8chr11+1373331013733355137334741373360213732270137324171373451213734580-0.106000.000350.012052includedK562TARDBP
MXEFAR1ENSG00000197601.8chr11+1373331013733355137334741373359313732239137324171373451213734580-0.164000.001000.026972includedK562TARDBP
MXEFAR1ENSG00000197601.8chr11+1373331013733355137334741373359313732239137324171373451213734580-0.139000.004600.082772includedK562SBDS

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FAR1 is not avaliable on ENCORE database.