VCL

General Information

Gene Name       : VCL
Gene ID             : ENSG00000035403.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: VCL)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878VCLENSG00000035403.1718.1719.7218.95ENCSR000AEF
HepG2VCLENSG00000035403.1716.1919.8518.02ENCSR985KAT
K562VCLENSG00000035403.1780.5578.4979.52ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for VCL is not avaliable on ENCORE database.



Proteins bound to RNA
  • VCL RNA is bound by 47 proteins.  







eCLIP assay for VCL is not avaliable on ENCORE database.





47 proteins are bound to VCL RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr107587789875877948+3'-UTR,CDS4.433925.17013K562RBM15
chr107587900375879110+3'-UTR4.21512400.00000K562UPF1
chr107587876775878792+3'-UTR6.3145836.75818K562UPF1
chr107587946975879499+3'-UTR5.2946025.80437K562UPF1
chr107587840475878455+3'-UTR4.1655813.50857K562IGF2BP1
chr107587840575878454+3'-UTR3.087095.72091K562AKAP1
chr107587840575878507+3'-UTR4.691536.23064HepG2UPF1
chr107587871275878767+3'-UTR4.9743149.22696K562UPF1
chr107587864975878724+3'-UTR3.572663.84724HepG2IGF2BP1
chr107587845375878509+3'-UTR3.7426044.32931K562UPF1
chr107587896875879000+3'-UTR3.6464814.71043K562FAM120A
chr107587863475878720+3'-UTR3.439793.92922HepG2AKAP1
chr107587900675879059+3'-UTR3.5915910.46364K562IGF2BP1
chr107587969775879746+3'-UTR3.369216.42235K562LIN28B
chr107587903875879092+3'-UTR3.172785.76901HepG2SUB1
chr107587826575878343+3'-UTR4.696525.94150HepG2UPF1
chr107587872675878768+3'-UTR4.002543.98448HepG2IGF2BP1
chr107587850975878600+3'-UTR4.9466449.79697K562UPF1
chr107587861975878715+3'-UTR3.5476417.57017K562PCBP1
chr107587937875879408+3'-UTR3.2903234.95001K562UPF1
chr107587966375879733+3'-UTR3.5731914.27872K562YBX3
chr107587952775879567+3'-UTR4.3486025.15639K562UPF1
chr107587902575879081+3'-UTR4.171203.70195HepG2UPF1
chr107587872375878763+3'-UTR3.108618.40991K562IGF2BP2
chr107587936675879458+3'-UTR3.576906.44854HepG2PCBP2
chr107587835875878411+3'-UTR3.9805046.79094K562UPF1
chr107587892675879003+3'-UTR3.6870640.17253K562UPF1
chr107587876375878801+3'-UTR3.0832512.02693K562IGF2BP2
chr107587900575879057+3'-UTR3.8880636.93900K562FAM120A
chr107587801375878049+3'-UTR4.441465.44291K562LIN28B
chr107587846775878525+3'-UTR3.162266.05081K562LIN28B
chr107587871575878813+3'-UTR4.4880830.20705K562PCBP1
chr107587828875878358+3'-UTR4.4350151.30663K562UPF1
chr107587879275878851+3'-UTR6.3312052.90156K562UPF1
chr107587952175879604+3'-UTR4.3062245.15189K562PUM2
chr107587862575878712+3'-UTR4.1121062.51527K562UPF1
chr107587925875879300+3'-UTR4.5757411.23092K562IGF2BP1
chr107587906375879102+3'-UTR3.099186.80128K562IGF2BP1
chr107587876975878840+3'-UTR3.5391513.81012K562IGF2BP1
chr107587814775878215+3'-UTR4.307559.92988K562IGF2BP2
chr107587953575879612+3'-UTR3.201186.45752K562DDX6
chr107587927675879308+3'-UTR5.7398924.56835K562UPF1
chr107587872275878812+3'-UTR3.745503.34998HepG2IGF2BP3
chr107587864975878728+3'-UTR3.192554.32417HepG2FAM120A
chr107587842675878501+3'-UTR4.367264.29728HepG2FAM120A
chr107587865675878818+3'-UTR5.1585314.32215HepG2UPF1
chr107587905775879122+3'-UTR3.1895533.64836K562FAM120A
chr107587933075879357+3'-UTR3.8035318.51029K562UPF1
chr107587892275879006+3'-UTR4.2636615.71438K562IGF2BP1
chr107587940875879467+3'-UTR4.4297156.15367K562UPF1
chr107587940875879460+3'-UTR3.4165926.79863K562FAM120A
chr107587872175878769+3'-UTR3.9244611.40930K562IGF2BP1
chr107587935775879375+3'-UTR3.1184726.62947K562UPF1
chr107587841175878453+3'-UTR3.6509360.78149K562UPF1
chr107587956275879631+3'-UTR4.2674214.79781K562PABPC4
chr107587854675878614+3'-UTR5.3911417.76146K562IGF2BP1
chr107587911075879164+3'-UTR5.0348038.24398K562UPF1
chr107575789575757975+5'-UTR,CDS4.884425.85562K562GEMIN5
chr107575792075757966+5'-UTR3.621187.65762K562YBX3
chr107585541275855437+CDS,intron-Distal,intron-Proximal3.6235810.52777K562DDX24
chr107586891375868962+CDS,intron-Proximal4.455117.92018K562AQR
chr107584895375848985+CDS,intron-Distal,intron-Proximal3.027005.81358K562FMR1
chr107587403575874116+CDS4.337905.21007K562SRSF1
chr107584221175842218+CDS,intron-Distal,intron-Proximal4.615825.42280K562FXR2
chr107586886575868952+CDS,intron-Proximal4.534064.90586K562SRSF1
chr107583460475834660+CDS,intron-Distal3.720395.97823HepG2BCLAF1
chr107584910275849107+CDS,intron-Distal3.6509111.08616K562YBX3
chr107585418075854217+CDS,intron-Distal3.4002110.54927K562DDX24
chr107584989375849956+CDS,intron-Distal3.1223315.56907K562DDX24
chr107585704075857080+CDS,intron-Distal3.441865.93591K562FXR2
chr107586368575863696+CDS,intron-Distal,intron-Proximal4.585046.77156K562AQR
chr107584907575849090+CDS,intron-Distal4.0461812.02158K562YBX3
chr107586081375860855+CDS,intron-Distal3.878438.66431K562FXR2
chr107586479675864849+CDS,intron-Distal,intron-Proximal3.1663110.02981K562BUD13
chr107587161675871699+CDS,intron-Distal,intron-Proximal4.1583224.40177K562QKI
chr107575811975758133+CDS3.7848214.30938K562YBX3
chr107587392075873972+CDS,intron-Proximal4.296324.12401HepG2U2AF2
chr107585541375855480+CDS,intron-Distal,intron-Proximal5.3647119.12173K562FXR2
chr107585541775855426+CDS,intron-Distal5.3862641.97551K562LIN28B
chr107583466075834708+CDS,intron-Distal,intron-Proximal3.268388.18888K562AQR
chr107586700175867048+CDS,intron-Distal3.377004.13112K562SRSF1
chr107586876475868812+CDS,intron-Proximal3.7725415.12954K562RPS3
chr107584325775843271+CDS,intron-Distal5.289658.15057K562FXR2
chr107585541075855415+CDS,intron-Distal,intron-Proximal5.5175237.91847K562LIN28B
chr107575797475757987+CDS4.5629224.75369K562YBX3
chr107583460375834666+CDS,intron-Distal,intron-Proximal3.1077313.98847K562DDX24
chr107584978075849793+CDS,intron-Distal,intron-Proximal3.498069.43411K562YBX3
chr107580285375802863+CDS3.387108.81743K562YBX3
chr107583251275832550+CDS,intron-Distal3.285506.63722K562FMR1
chr107586496375865034+CDS,intron-Distal4.356614.42709HepG2G3BP1
chr107580288675802908+CDS4.265486.81381K562DDX24
chr107584312375843152+CDS,intron-Distal,intron-Proximal3.394807.77799K562FXR2
chr107583462075834661+CDS,intron-Distal4.347184.83675HepG2G3BP1
chr107586081875860855+CDS,intron-Distal3.847036.54545K562FMR1
chr107583464375834659+CDS,intron-Distal4.817606.09979K562FXR2
chr107575804575758129+CDS3.8936511.92340K562FMR1
chr107583248775832539+CDS,intron-Distal,intron-Proximal3.093178.98598K562UCHL5
chr107575810875758112+CDS4.5013236.83295K562YBX3
chr107585546775855494+CDS,intron-Distal3.264748.29108K562LIN28B
chr107586479175864839+CDS,intron-Distal,intron-Proximal3.577675.34337K562AQR
chr107586362875863682+CDS,intron-Distal3.4485413.12804K562DDX24
chr107584312375843148+CDS,intron-Distal,intron-Proximal3.613768.84079K562FMR1
chr107584314375843204+CDS,intron-Distal4.2785514.25229K562DDX24
chr107586881675868858+CDS4.3837411.68674K562RPS3
chr107583083475830841+CDS,intron-Distal3.018283.14203K562LIN28B
chr107586491375865037+CDS,intron-Distal4.4610417.06982K562FXR2
chr107586491275864956+CDS,intron-Distal3.314567.24086K562RPS3
chr107585402875854084+CDS,intron-Distal,intron-Proximal4.170633.35081HepG2G3BP1
chr107586357775863590+CDS,intron-Distal,intron-Proximal3.977406.19451K562FXR2
chr107586074375860792+CDS,intron-Distal,intron-Proximal4.135434.15726HepG2G3BP1
chr107584226175842298+CDS,intron-Distal4.031738.55862K562DDX24
chr107584327075843323+CDS,intron-Distal,intron-Proximal4.819799.46915K562AQR
chr107580284075802853+CDS,intron-Proximal4.4498611.74861K562YBX3
chr107584909075849102+CDS,intron-Distal3.7465010.67597K562YBX3
chr107585418775854220+CDS,intron-Distal,intron-Proximal5.8359656.42909K562LIN28B
chr107583076975830842+CDS,intron-Distal,intron-Proximal3.0147715.28685K562UCHL5
chr107575803675758050+CDS3.1971713.25875K562YBX3
chr107583042975830460+CDS,intron-Distal3.9525110.53109K562DDX24
chr107584227675842302+CDS,intron-Distal4.0886010.68031K562FXR2
chr107585402875854080+CDS,intron-Distal,intron-Proximal3.3200013.75935K562DDX24
chr107587394875874003+CDS4.4571511.17834K562U2AF2
chr107575798775758018+CDS4.2368019.90219K562YBX3
chr107587392575873948+CDS,intron-Proximal3.7533212.92453K562U2AF2
chr107583255775832597+CDS,intron-Distal3.507606.87242K562DDX24
chr107585556675855588+CDS,intron-Distal4.407394.95909K562BUD13
chr107587388875873955+CDS,intron-Proximal5.6425348.84381K562SF3B4
chr107586075275860780+CDS,intron-Distal,intron-Proximal3.824216.82493K562DDX24
chr107583248775832551+CDS,intron-Distal,intron-Proximal3.223957.26125K562LIN28B
chr107584225775842303+CDS,intron-Distal,intron-Proximal3.117578.03189K562FMR1
chr107575810175758114+CDS3.908315.29818K562FXR2
chr107585541275855458+CDS,intron-Distal,intron-Proximal3.781086.31664HepG2LIN28B
chr107584312375843143+CDS,intron-Distal,intron-Proximal3.636025.69590K562DDX24
chr107585549975855590+CDS,intron-Distal3.4894710.17218K562FMR1
chr107586873775868764+CDS,intron-Proximal3.037083.89696K562RPS3
chr107583076975830827+CDS,intron-Distal3.045143.55800HepG2BCLAF1
chr107587455375874625+CDS3.1737715.01642K562YBX3
chr107584891675848982+CDS,intron-Distal,intron-Proximal4.069205.68247K562SF3B4
chr107575806975758085+CDS3.9467645.43783K562YBX3
chr107585402875854088+CDS,intron-Distal,intron-Proximal3.528063.95463K562ZNF800
chr107585542675855463+CDS,intron-Distal4.7695530.09094K562LIN28B
chr107575811275758119+CDS4.0998221.52292K562YBX3
chr107584895375848982+CDS,intron-Distal,intron-Proximal5.280607.80708K562FXR2
chr107584983275849957+CDS,intron-Distal,intron-Proximal3.257017.64618K562ZNF800
chr107583050875830543+CDS,intron-Distal3.022979.82516K562YBX3
chr107575853375758602+intron-Distal4.057713.33944K562MATR3
chr107587420175874254+intron-Distal,intron-Proximal3.8080611.82868K562EIF4G2
chr107575898075759082+intron-Distal3.956804.66361K562XRN2
chr107584911075849192+intron-Distal,intron-Proximal5.092935.69951K562AQR
chr107577462675774713+intron-Distal3.038314.58741K562XRCC6
chr107587380575873875+intron-Distal,intron-Proximal3.4269910.73941K562U2AF2
chr107586046675860553+intron-Distal5.9981313.64051K562TARDBP
chr107575816475758283+intron-Distal,intron-Proximal3.843157.06152K562XRN2
chr107578164975781692+intron-Distal4.9050111.20756K562PTBP1
chr107578547875785523+intron-Distal3.785634.40109K562AKAP8L
chr107583470475834811+intron-Distal,intron-Proximal3.609106.18396K562KHSRP
chr107581592175816023+intron-Distal4.8035212.17826K562TARDBP
chr107575838975758440+intron-Distal4.309908.89959K562NONO
chr107578084375780915+intron-Distal3.870683.57432K562NONO
chr107582766275827793+intron-Distal3.765046.89441K562KHSRP
chr107575822075758271+intron-Distal,intron-Proximal3.477376.19583K562RBM15
chr107583098575831085+intron-Distal3.406164.30679K562KHSRP
chr107578547775785526+intron-Distal4.272947.51523K562FASTKD2
chr107575853375758606+intron-Distal4.4927211.66886K562NONO
chr107582352275823628+intron-Distal3.110983.93901K562KHSRP
chr107578169275781775+intron-Distal4.185566.20612K562PTBP1
chr107579387675793965+intron-Distal4.7016712.98075K562CSTF2T
chr107587146675871518+intron-Distal3.953306.02743K562HNRNPM
chr107579332075793405+intron-Distal4.323604.24113K562MATR3
chr107586921875869330+intron-Distal3.700988.33567K562KHSRP
chr107584999675850071+intron-Distal,intron-Proximal4.720769.08502K562PTBP1
chr107584112175841189+intron-Distal4.093645.30350K562HNRNPM
chr107578157875781778+intron-Distal3.997567.19265K562MATR3
chr107587079175870828+intron-Distal4.111193.54147K562HNRNPM
chr107583087975830928+intron-Distal,intron-Proximal4.366173.31283K562PRPF8
chr107583232175832400+intron-Distal,intron-Proximal4.251804.96658K562KHSRP
chr107587261475872690+intron-Distal5.1184826.37577K562QKI
chr107575845775758506+intron-Distal3.911847.00469K562NONO
chr107587089475871010+intron-Distal4.9528815.26283K562HNRNPM
chr107581046675810536+intron-Distal4.033897.71960K562TARDBP
chr107586738975867445+intron-Distal3.838003.34609K562TARDBP
chr107583028975830356+intron-Distal,intron-Proximal3.364275.98045K562KHSRP
chr107587419275874294+intron-Distal,intron-Proximal3.728643.08314K562TARDBP
chr107587424975874297+intron-Distal4.103136.75234K562PRPF8
chr107586369675863731+intron-Distal,intron-Proximal4.4921111.69745K562AQR
chr107579417775794245+intron-Distal4.519573.55787K562PTBP1
chr107578547575785541+intron-Distal6.023267.63549K562GTF2F1
chr107587423675874294+intron-Distal,intron-Proximal4.4262617.78968K562EFTUD2
chr107587060675870723+intron-Distal4.071996.21862K562MATR3
chr107577189975771961+intron-Distal4.354304.24113K562MATR3
chr107582856875828671+intron-Distal3.803353.45805K562KHSRP
chr107586369475863775+intron-Distal,intron-Proximal3.977584.10688K562KHSRP
chr107587367075873755+intron-Distal3.317088.63791K562PTBP1
chr107579387575793943+intron-Distal6.5531335.98099K562FMR1
chr107575828075758322+intron-Distal4.614176.40241K562NONO
chr107586458275864724+intron-Distal,intron-Proximal3.724586.59336K562KHSRP
chr107587435975874399+intron-Distal3.384433.76553K562PRPF8
chr107579381475793858+intron-Distal5.3367612.05461K562KHSRP
chr107581862675818724+intron-Distal4.8713520.17197K562TARDBP
chr107586731175867389+intron-Distal4.200183.87294K562TARDBP
chr107587253375872619+intron-Distal4.366745.11295K562U2AF2
chr107575835175758389+intron-Distal4.118063.57432K562NONO
chr107586379875863862+intron-Distal4.490363.83114K562DGCR8
chr107575872575758779+intron-Distal4.999195.94830K562TIA1
chr107579374875793814+intron-Distal4.7784715.54337K562KHSRP
chr107587143475871490+intron-Distal4.117033.45817K562MATR3
chr107587386375873926+intron-Proximal3.431145.86727K562PTBP1
chr107587467075874698+intron-Proximal4.603314.65563K562AQR
chr107587465875874670+intron-Proximal4.353343.70761K562AQR
chr107587418275874236+intron-Proximal3.5906910.54909K562EFTUD2
chr107587447975874530+intron-Proximal6.0563110.98510K562SF3B4
chr107575813375758220+intron-Proximal3.878837.09919K562RBM15
chr107587389075873937+intron-Proximal4.324423.98315HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for VCL is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for VCL is not available on ENCORE database.

  • 125 RBPs can affect the levels of VCL.  








The Knockdown/knockout RNA-Seq assay for VCL is not available on ENCORE database.





125 RBPs can affect the gene expression of VCL :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
VCLENSG00000035403.121125.96650801.927100.489504.495803.15950HepG2AATF
VCLENSG00000035403.121799.150101168.235700.6229015.3335014.14650HepG2ACO1
VCLENSG00000035403.12890.683001144.15570-0.361302.555001.59660HepG2ADAR
VCLENSG00000035403.122711.494001324.678901.0333014.9464013.81000HepG2AKAP1
VCLENSG00000035403.121783.880701173.685700.6039010.119808.76370HepG2AKAP8L
VCLENSG00000035403.121951.218001096.054900.8320011.386409.87710HepG2ASCC1
VCLENSG00000035403.122173.916801829.120300.249002.972202.26490HepG2AUH
VCLENSG00000035403.12915.756001761.91280-0.9441014.4942013.27450HepG2BOP1
VCLENSG00000035403.121594.952401288.488900.307703.046902.23990HepG2CALR
VCLENSG00000035403.12958.847001617.57140-0.754508.254507.12020HepG2CPSF6
VCLENSG00000035403.121208.00490885.324500.448204.008403.20620HepG2DDX21
VCLENSG00000035403.121672.487201123.677800.573704.653503.67900HepG2DDX55
VCLENSG00000035403.121560.481101090.065500.517504.102603.36200HepG2DDX6
VCLENSG00000035403.12891.042501111.21070-0.318602.321101.42530HepG2DHX30
VCLENSG00000035403.12960.906101152.11420-0.261802.247101.60760HepG2DNAJC21
VCLENSG00000035403.12973.035701141.92970-0.230902.429401.81210HepG2DNAJC2
VCLENSG00000035403.121511.167301047.878300.528104.624903.86910HepG2EIF2S1
VCLENSG00000035403.121451.052501158.015100.325301.855901.32820HepG2EIF4A3
VCLENSG00000035403.122661.780001127.516201.2391016.9187015.31830HepG2EIF4B
VCLENSG00000035403.12929.399901420.87000-0.612406.731205.48640HepG2EIF4G2
VCLENSG00000035403.121841.079402100.08140-0.189901.899601.38140HepG2ETF1
VCLENSG00000035403.121987.731401141.533700.800004.627103.55240HepG2EWSR1
VCLENSG00000035403.12988.97760781.194300.340202.909701.71080HepG2FAM120A
VCLENSG00000035403.121087.30950843.440900.366302.882201.71610HepG2FASTKD2
VCLENSG00000035403.123734.943301512.952201.3036025.5110023.61540HepG2FIP1L1
VCLENSG00000035403.12584.59730935.27070-0.677906.067404.26310HepG2FKBP4
VCLENSG00000035403.12958.841301620.26180-0.756903.228202.12760HepG2FTO
VCLENSG00000035403.121071.95140813.027800.398803.306302.45200HepG2FUBP3
VCLENSG00000035403.121419.495901083.868400.389102.660502.00710HepG2G3BP1
VCLENSG00000035403.121474.71150941.228800.647704.576503.26110HepG2GNB2L1
VCLENSG00000035403.121008.396201293.78750-0.359502.838802.13690HepG2HNRNPC
VCLENSG00000035403.121341.800301952.31340-0.5410010.888609.59020HepG2HNRNPF
VCLENSG00000035403.12983.841401369.42080-0.477108.461007.34140HepG2HNRNPL
VCLENSG00000035403.121326.910201749.97300-0.399303.187302.51770HepG2HNRNPLL
VCLENSG00000035403.121444.151201043.730500.468404.941803.71030HepG2HNRNPM
VCLENSG00000035403.121255.157301922.47430-0.615109.955108.66420HepG2IGF2BP1
VCLENSG00000035403.121684.411701101.720900.612406.490905.49620HepG2IGF2BP2
VCLENSG00000035403.122441.821501033.948501.239707.157505.62220HepG2IGF2BP3
VCLENSG00000035403.121794.444801312.824600.4508010.272208.95090HepG2ILF2
VCLENSG00000035403.121807.881801175.373200.621103.202302.52810HepG2MATR3
VCLENSG00000035403.121225.850201784.50850-0.541703.166902.12310HepG2MTPAP
VCLENSG00000035403.12826.263101490.75070-0.8514017.2465015.44300HepG2NOL12
VCLENSG00000035403.121005.134301551.60710-0.626406.641305.50940HepG2NSUN2
VCLENSG00000035403.121494.582301071.373300.480203.965003.11140HepG2PABPC4
VCLENSG00000035403.121527.761301272.166200.264002.846301.98750HepG2PARN
VCLENSG00000035403.121527.007901093.024800.482304.166403.44880HepG2PCBP1
VCLENSG00000035403.12843.462101146.32670-0.442605.391304.39210HepG2PPIL4
VCLENSG00000035403.122045.536101112.136700.8790025.6859024.34260HepG2PTBP1
VCLENSG00000035403.121867.330501510.711900.305605.317804.54960HepG2PUM1
VCLENSG00000035403.122303.700401509.582600.6097011.064309.77180HepG2PUM2
VCLENSG00000035403.121857.477401189.917100.6424016.5228015.24210HepG2PUS1
VCLENSG00000035403.121478.851601204.592700.295802.589201.98150HepG2QKI
VCLENSG00000035403.122142.688401588.128400.432005.441804.28720HepG2RBM15
VCLENSG00000035403.122741.901501755.278100.6434015.0630014.05160HepG2RBM22
VCLENSG00000035403.121768.913201093.199500.6942010.770409.49940HepG2RBM25
VCLENSG00000035403.121305.39560903.006200.531603.877702.61750HepG2RCC2
VCLENSG00000035403.121938.108701237.748600.6468013.9212012.88130HepG2NELFE
VCLENSG00000035403.12946.614702103.07530-1.1517025.5963023.95770HepG2RPLP0
VCLENSG00000035403.121462.681601025.554900.512104.719703.68940HepG2RPS2
VCLENSG00000035403.121441.548201046.887900.461403.819002.54320HepG2RPS5
VCLENSG00000035403.12841.494901144.55990-0.443806.583905.65390HepG2SAFB2
VCLENSG00000035403.121199.72720853.637000.490904.388503.21480HepG2SERBP1
VCLENSG00000035403.12894.142401373.13580-0.618904.829103.92290HepG2SF3A3
VCLENSG00000035403.121192.702001732.19000-0.538405.708204.72460HepG2SF3B1
VCLENSG00000035403.121668.861801157.979900.527209.205908.22430HepG2SF3B4
VCLENSG00000035403.121999.366601334.753800.5829016.5329015.16230HepG2SMN1
VCLENSG00000035403.124029.905401982.519601.0233054.2710052.78720HepG2SRFBP1
VCLENSG00000035403.12553.825601070.21100-0.9504011.412008.53990HepG2SRP68
VCLENSG00000035403.123153.294601208.638601.3834076.2995074.59600HepG2SRSF1
VCLENSG00000035403.121350.281001863.66480-0.464903.196002.11100HepG2SRSF3
VCLENSG00000035403.121894.889401405.141600.431307.644406.67190HepG2SRSF5
VCLENSG00000035403.121568.881601918.07310-0.289903.650102.86800HepG2SRSF7
VCLENSG00000035403.122153.828501721.292200.323304.968304.32020HepG2SSB
VCLENSG00000035403.122496.313601597.990400.643407.636806.68860HepG2SUCLG1
VCLENSG00000035403.121266.161401021.425000.309802.393201.51400HepG2SUPT6H
VCLENSG00000035403.122475.069201118.574401.1457018.2556016.78030HepG2SUPV3L1
VCLENSG00000035403.121478.055501086.256000.444205.760505.00250HepG2TAF15
VCLENSG00000035403.121488.75300998.243900.576507.808306.41770HepG2TIA1
VCLENSG00000035403.121080.473501260.00790-0.221802.087101.58420HepG2TRIM56
VCLENSG00000035403.12709.798601294.10420-0.8665011.8881010.55820HepG2U2AF1
VCLENSG00000035403.121527.178101217.763700.326504.505103.65020HepG2UPF1
VCLENSG00000035403.12573.828101024.19380-0.835806.772205.15880HepG2UPF2
VCLENSG00000035403.121484.25180961.943900.625604.374902.78490HepG2XRCC5
VCLENSG00000035403.121699.084201075.804200.659205.023903.62250HepG2XRCC6
VCLENSG00000035403.12881.948701101.11470-0.320201.990501.36770HepG2XRN2
VCLENSG00000035403.121444.094501253.318300.204302.080901.48560HepG2ZC3H8
VCLENSG00000035403.121020.905401339.30390-0.391606.399105.65720HepG2ZNF622
VCLENSG00000035403.129315.638407799.054100.256302.404801.31080K562AARS
VCLENSG00000035403.127089.894108588.33730-0.276603.624401.87800K562AKAP1
VCLENSG00000035403.1211314.4812014801.43940-0.387604.865603.14990K562APOBEC3C
VCLENSG00000035403.123068.5621012244.45130-1.9965072.3194069.69680K562AQR
VCLENSG00000035403.127997.327307155.274100.160402.266501.39850K562BCLAF1
VCLENSG00000035403.1216967.3036020627.75760-0.281804.187502.97950K562CELF1
VCLENSG00000035403.128852.0341014045.95210-0.6661027.4456025.60050K562DDX47
VCLENSG00000035403.124894.017106070.35240-0.310802.603701.31910K562DHX30
VCLENSG00000035403.125510.926706640.68970-0.269002.140201.33650K562EFTUD2
VCLENSG00000035403.1210054.818908133.062700.305903.535602.73750K562EIF2S2
VCLENSG00000035403.122636.298705516.00360-1.0651011.532209.47760K562EIF3A
VCLENSG00000035403.124909.607507109.58600-0.534205.149903.68440K562EIF3D
VCLENSG00000035403.124262.890405984.08000-0.489305.240604.16160K562EIF3G
VCLENSG00000035403.125891.890709092.25690-0.6259010.750209.11350K562EIF4A3
VCLENSG00000035403.1212874.0239016774.75220-0.381809.098607.43130K562EIF4G2
VCLENSG00000035403.127083.751205290.107000.421106.469904.30480K562FUS
VCLENSG00000035403.125538.650309455.60060-0.7716021.1512019.58820K562FXR1
VCLENSG00000035403.126855.2335010103.78480-0.5596010.030207.97870K562GLRX3
VCLENSG00000035403.126614.0554010836.87630-0.712306.101704.97300K562GRSF1
VCLENSG00000035403.127377.808709914.57760-0.426406.476504.87750K562HNRNPA1
VCLENSG00000035403.125543.127608533.74570-0.6225012.7175011.51420K562HNRNPC
VCLENSG00000035403.127833.9035010979.57610-0.4870011.123209.36280K562HNRNPU
VCLENSG00000035403.127630.4717010904.67820-0.515107.252705.98030K562HSPD1
VCLENSG00000035403.123877.783405665.15550-0.546906.453804.20800K562ILF3
VCLENSG00000035403.127102.0747010759.99790-0.5994011.086009.32890K562MAGOH
VCLENSG00000035403.126889.9901010737.78920-0.6401013.4502011.31730K562MATR3
VCLENSG00000035403.1216947.0973013985.814400.277003.094702.12360K562MBNL1
VCLENSG00000035403.129459.696807388.046600.356504.434903.30650K562METAP2
VCLENSG00000035403.127252.3422010622.92850-0.5507016.6280014.87380K562MTPAP
VCLENSG00000035403.1212739.878009803.060700.377902.685701.81810K562NAA15
VCLENSG00000035403.1212601.3642018349.49520-0.542208.858206.24770K562NOL12
VCLENSG00000035403.1210743.2504011802.37410-0.135602.131801.46820K562NSUN2
VCLENSG00000035403.127197.5462013744.95220-0.933308.777406.58060K562PABPC1
VCLENSG00000035403.127844.239709573.27750-0.287402.899401.89840K562PCBP2
VCLENSG00000035403.126688.9460010297.02160-0.622408.150906.72520K562PCBP3
VCLENSG00000035403.1213321.3518017236.68390-0.371706.145304.12130K562PNPT1
VCLENSG00000035403.125309.343007898.32910-0.5730011.8215010.22260K562POLR2G
VCLENSG00000035403.123339.926706462.17040-0.9522020.7356018.67980K562PRPF8
VCLENSG00000035403.128396.9595010454.19860-0.316103.887703.11320K562PTBP1
VCLENSG00000035403.1211022.4543018302.26540-0.7316015.7084013.73720K562PUF60
VCLENSG00000035403.1215101.7583011666.391500.372302.773702.23010K562PUS1
VCLENSG00000035403.128209.6693010022.96320-0.287902.661601.83820K562RBM22
VCLENSG00000035403.129548.467707291.590500.388905.247803.33070K562RBM25
VCLENSG00000035403.124268.547306582.02630-0.624807.174205.84300K562RPS19
VCLENSG00000035403.124959.028707037.09210-0.504906.077004.46810K562SAFB
VCLENSG00000035403.128788.3629011646.90330-0.406306.612905.39970K562SF3A3
VCLENSG00000035403.129978.708807994.279400.319802.371101.58160K562SF3B4
VCLENSG00000035403.127757.3991010248.88050-0.401806.047705.01100K562SRSF1
VCLENSG00000035403.125666.882006654.72380-0.231802.242601.31330K562SRSF4
VCLENSG00000035403.128063.5509012753.67870-0.661403.342701.53700K562STIP1
VCLENSG00000035403.125872.775607922.00540-0.431807.158605.82100K562SYNCRIP
VCLENSG00000035403.127641.9995010371.93140-0.440705.035104.06540K562TARDBP
VCLENSG00000035403.125189.317907359.36350-0.504005.620304.24170K562TIAL1
VCLENSG00000035403.127760.4185011135.71750-0.5210020.1277018.16670K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for VCL is not available on ENCORE database.





3 RBPs can affect the splicing of VCL :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEVCLENSG00000035403.12chr10+7587166675871870758687287586891475873941758741450.161000.000090.00248includedHepG2U2AF1
SEVCLENSG00000035403.12chr10+7587166675871870758687287586891475873941758741450.118000.000470.01447includedHepG2HNRNPK
SEVCLENSG00000035403.12chr10+7587166675871870758687287586891475873941758741450.222000.000000.00000includedHepG2U2AF2
SEVCLENSG00000035403.12chr10+7587166675871870758687287586891475873941758741450.181000.000000.00000includedK562U2AF1
SEVCLENSG00000035403.12chr10+7587166675871870758687287586891475873941758741450.058000.000010.00046includedK562U2AF2
A3SSVCLENSG00000035403.12chr10+7584218275842302758422117584230275834500758346610.074000.000000.00000longerK562U2AF2
A3SSVCLENSG00000035403.12chr10+7584218275842302758422117584230275834500758346610.058000.000000.00000longerK562U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for VCL is not avaliable on ENCORE database.