MARK3

General Information

Gene Name : MARK3
Gene ID : ENSG00000075413.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MARK3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MARK3	ENSG00000075413.17	32.83	34.51	33.67	ENCSR000AEF
HepG2	MARK3	ENSG00000075413.17	29.71	36.43	33.07	ENCSR985KAT
K562	MARK3	ENSG00000075413.17	39.64	43.92	41.78	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MARK3 is not avaliable on ENCORE database.

Proteins bound to RNA

MARK3 RNA is bound by 29 proteins.

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eCLIP assay for MARK3 is not avaliable on ENCORE database.

29 proteins are bound to MARK3 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	103871418	103871604	+	CDS	5.23175	22.01704	HepG2	GRWD1
chr14	103964917	103965075	+	intron-Distal,intron-Proximal	5.44852	21.30929	HepG2	QKI
chr14	103934230	103934300	+	intron-Distal,intron-Proximal	4.10698	20.41993	K562	KHSRP
chr14	103934320	103934451	+	CDS,intron-Distal,intron-Proximal	4.11499	18.28385	K562	AQR
chr14	103918685	103918756	+	intron-Distal	5.92632	16.13880	HepG2	QKI
chr14	103933415	103933490	+	CDS,intron-Distal,intron-Proximal	4.28443	15.11988	HepG2	BCLAF1
chr14	103966240	103966313	+	intron-Distal	5.90794	14.54815	K562	TARDBP
chr14	103873760	103873866	+	intron-Distal	5.43081	14.05565	K562	QKI
chr14	103933490	103933554	+	CDS,intron-Distal,intron-Proximal	3.68784	13.02953	HepG2	BCLAF1
chr14	103947809	103947887	+	intron-Distal	4.56982	12.79287	HepG2	U2AF2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 124 entries

eCLIP assay for MARK3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MARK3 is not available on ENCORE database.
65 RBPs can affect the levels of MARK3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MARK3 is not available on ENCORE database.

65 RBPs can affect the gene expression of MARK3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MARK3	ENSG00000075413.13	3100.30420	1740.91300	0.83250	33.23160	31.99690	HepG2	SRFBP1
MARK3	ENSG00000075413.13	1827.56120	1044.66210	0.80680	25.60380	23.93410	HepG2	ZC3H8
MARK3	ENSG00000075413.13	1886.44470	1092.54790	0.78790	21.68070	20.62390	HepG2	SRSF1
MARK3	ENSG00000075413.13	2116.77720	1410.78370	0.58530	17.19820	16.12510	HepG2	ZNF622
MARK3	ENSG00000075413.13	1661.24730	1059.76030	0.64840	15.76290	14.56460	HepG2	ACO1
MARK3	ENSG00000075413.13	3909.04340	2670.17120	0.54980	14.68540	13.30020	K562	DDX47
MARK3	ENSG00000075413.13	3027.48610	2131.39910	0.50620	13.96570	12.25180	K562	WDR43
MARK3	ENSG00000075413.13	2194.32790	1511.49590	0.53770	12.39120	11.45830	HepG2	SSB
MARK3	ENSG00000075413.13	1731.70880	926.63280	0.90200	11.25450	9.82460	HepG2	DDX55
MARK3	ENSG00000075413.13	2528.89140	1844.17280	0.45540	9.13790	8.14990	HepG2	ETF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 69 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MARK3 is not available on ENCORE database.

26 RBPs can affect the splicing of MARK3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	MARK3	ENSG00000075413.13	chr14	+	103966492	103966537			103958113	103958371	103969218	103969408	-0.08000	0.00016	excluded	K562	SF3B4
SE	MARK3	ENSG00000075413.13	chr14	+	103964838	103964865			103957875	103958371	103969218	103969589	0.40100	0.00026	included	HepG2	IGF2BP3
SE	MARK3	ENSG00000075413.13	chr14	+	103932308	103932428			103931893	103932130	103932679	103932779	-0.10100	0.00005	excluded	K562	U2AF2
SE	MARK3	ENSG00000075413.13	chr14	+	103915255	103915304			103894723	103894777	103918254	103918320	-0.34500	0.00000	excluded	K562	AGGF1
SE	MARK3	ENSG00000075413.13	chr14	+	103964838	103964865			103958113	103958371	103969218	103969589	0.44300	0.00000	included	HepG2	HNRNPC
A3SS	MARK3	ENSG00000075413.13	chr14	+	103934369	103934523			103934417	103934523	103933415	103933528	0.27700	0.00000	longer	K562	U2AF2
A3SS	MARK3	ENSG00000075413.13	chr14	+	103946701	103946827			103946723	103946827	103941329	103941547	0.09100	0.00000	longer	K562	AQR
A3SS	MARK3	ENSG00000075413.13	chr14	+	103932665	103932779			103932679	103932779	103932308	103932428	0.11400	0.00000	longer	K562	AQR
MXE	MARK3	ENSG00000075413.13	chr14	+	103934319	103934523	103941329	103941547	103933415	103933528	103946723	103946827	0.05300	0.00001	1included	K562	AQR
MXE	MARK3	ENSG00000075413.13	chr14	+	103918254	103918320	103923478	103923549	103894723	103894777	103928741	103928798	0.14000	0.00004	1included	K562	AQR

Showing 1 to 10 of 51 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MARK3

General Information

Functions

Localization

Domains (AlphaFold: MARK3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MARK3 is not avaliable on ENCORE database.

29 proteins are bound to MARK3 RNA:

eCLIP assay for MARK3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MARK3 is not available on ENCORE database.

65 RBPs can affect the gene expression of MARK3 :

The Knockdown/knockout RNA-Seq assay for MARK3 is not available on ENCORE database.

26 RBPs can affect the splicing of MARK3 :

The Knockdown/knockout RNA-Seq assay for MARK3 is not avaliable on ENCORE database.