ZNF680

General Information

Gene Name       : ZNF680
Gene ID             : ENSG00000173041.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF680)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF680ENSG00000173041.117.245.176.21ENCSR000AEF
HepG2ZNF680ENSG00000173041.112.998.095.54ENCSR985KAT
K562ZNF680ENSG00000173041.118.319.318.81ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF680 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF680 RNA is bound by 8 proteins.  







eCLIP assay for ZNF680 is not avaliable on ENCORE database.





8 proteins are bound to ZNF680 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr76398627363986327-3'-UTR,intron-Distal3.928625.78005K562KHSRP
chr76398566163985709-3'-UTR,intron-Distal4.396564.54401K562KHSRP
chr76398550263985611-3'-UTR,intron-Distal4.6693413.78079K562KHSRP
chr76398509363985167-3'-UTR,intron-Distal4.352626.44495HepG2U2AF2
chr76398552263985610-3'-UTR,intron-Distal4.458524.00239HepG2KHSRP
chr76398620463986273-3'-UTR,intron-Distal3.293484.81794K562KHSRP
chr76398507663985139-3'-UTR,intron-Distal,intron-Proximal3.726956.59733K562KHSRP
chr76398183063981892-CDS,intron-Distal4.086343.48187K562RBM15
chr76402320164023309-CDS,intron-Distal4.468188.44359HepG2EFTUD2
chr76398856163988609-intron-Distal4.372174.78076K562HNRNPM
chr76398346263983529-intron-Distal3.557524.72639K562KHSRP
chr76398490163984959-intron-Distal4.207037.69621K562KHSRP
chr76399360463993660-intron-Distal5.7934612.99096K562EXOSC5
chr76401617964016221-intron-Distal4.706033.86368HepG2HNRNPM
chr76399396763994017-intron-Distal3.722516.40701K562EXOSC5
chr76399413863994188-intron-Distal4.735285.44433K562EXOSC5
chr76399570663995787-intron-Distal3.933956.29905HepG2MATR3
chr76401575264015795-intron-Distal4.143537.61465K562EXOSC5
chr76398955463989599-intron-Distal4.843856.96728HepG2HNRNPM
chr76401596064016006-intron-Distal3.155045.41777K562EXOSC5
chr76398916363989192-intron-Distal4.261094.48560K562EXOSC5
chr76399571063995754-intron-Distal4.3186118.03662HepG2PTBP1
chr76399306463993097-intron-Distal4.465794.80399K562EXOSC5
chr76399285563992878-intron-Distal4.064763.30687K562EXOSC5
chr76401561564015707-intron-Distal3.833663.18845HepG2HNRNPM
chr76401632964016390-intron-Distal4.4704914.87928K562EXOSC5
chr76398484963984901-intron-Distal4.907407.58902K562KHSRP
chr76399290363992948-intron-Distal4.258273.89085K562EXOSC5
chr76398926863989326-intron-Distal4.260398.21369K562EXOSC5
chr76399245963992521-intron-Distal4.9999713.19522K562EXOSC5
chr76399402263994065-intron-Distal4.743985.76606K562EXOSC5
chr76399009563990145-intron-Distal3.968493.04182K562HNRNPM
chr76398309863983122-intron-Distal4.381264.10688K562KHSRP
chr76399482763994874-intron-Distal3.105123.10855K562EXOSC5
chr76400499164005096-intron-Distal3.351466.60316K562KHSRP
chr76401676564016838-intron-Distal4.182383.86368HepG2HNRNPM
chr76398974663989797-intron-Distal3.348554.02190K562EXOSC5
chr76401613464016151-intron-Distal4.167983.89080K562EXOSC5
chr76401551164015566-intron-Distal3.965798.47709K562EXOSC5
chr76399035563990392-intron-Distal4.919806.41216K562EXOSC5
chr76399570363995754-intron-Distal4.9394718.89191K562MATR3
chr76398953363989596-intron-Distal4.445594.78076K562HNRNPM
chr76401650464016545-intron-Distal4.064766.71225K562EXOSC5
chr76399076163990830-intron-Distal4.385068.51196K562EXOSC5
chr76401562164015699-intron-Distal3.740019.14798K562EXOSC5
chr76399279063992839-intron-Distal4.553574.48623K562EXOSC5
chr76398939363989455-intron-Distal3.784655.80877K562EXOSC5
chr76399393063993967-intron-Distal3.988764.31658K562EXOSC5
chr76399570563995781-intron-Distal5.8906420.14210K562PTBP1
chr76398378863983862-intron-Distal3.005883.40308K562KHSRP
chr76399575463995808-intron-Distal3.311785.05821K562MATR3
chr76398856263988607-intron-Distal3.320193.68481HepG2HNRNPM
chr76401617564016221-intron-Distal3.921933.54147K562HNRNPM
chr76399575463995827-intron-Distal4.078785.36899HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF680 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF680 is not available on ENCORE database.

  • 73 RBPs can affect the levels of ZNF680.  








The Knockdown/knockout RNA-Seq assay for ZNF680 is not available on ENCORE database.





73 RBPs can affect the gene expression of ZNF680 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF680ENSG00000173041.7378.02150197.248800.938405.880905.13900HepG2AKAP1
ZNF680ENSG00000173041.7219.40120292.44680-0.414602.167601.54630HepG2AUH
ZNF680ENSG00000173041.7203.13510322.52500-0.667002.005101.48850HepG2BOP1
ZNF680ENSG00000173041.7419.46700296.113500.502302.218601.59450HepG2CPSF6
ZNF680ENSG00000173041.7238.36130318.28820-0.417202.472201.85790HepG2CELF1
ZNF680ENSG00000173041.7137.17730223.33040-0.703103.953803.12560HepG2DNAJC21
ZNF680ENSG00000173041.7295.53960167.889300.815703.472902.70570HepG2EIF4B
ZNF680ENSG00000173041.7177.26740323.46640-0.867705.465204.34220HepG2EIF4G2
ZNF680ENSG00000173041.7304.09930218.217400.478702.336401.32870HepG2ESF1
ZNF680ENSG00000173041.7206.65870107.696400.940204.912503.88050HepG2FUBP3
ZNF680ENSG00000173041.7460.48230335.717000.455802.109801.54640HepG2GPKOW
ZNF680ENSG00000173041.798.67500176.85380-0.841803.457401.91550HepG2HNRNPA0
ZNF680ENSG00000173041.7141.34290252.29680-0.835905.375604.41660HepG2HNRNPF
ZNF680ENSG00000173041.7202.29570320.37640-0.663301.890101.36070HepG2HNRNPLL
ZNF680ENSG00000173041.7154.00520249.13590-0.694004.505603.74830HepG2HNRNPU
ZNF680ENSG00000173041.7164.77790248.44500-0.592402.774902.04940HepG2IGF2BP1
ZNF680ENSG00000173041.791.82070164.06840-0.837403.383002.64270HepG2IGF2BP2
ZNF680ENSG00000173041.7185.35910254.48400-0.457302.547001.84090HepG2ILF2
ZNF680ENSG00000173041.7245.52170156.964400.645303.890402.98840HepG2PRPF4
ZNF680ENSG00000173041.7240.51620139.660700.784105.056404.36320HepG2PTBP1
ZNF680ENSG00000173041.7246.56760343.69570-0.479102.992702.29470HepG2PUM2
ZNF680ENSG00000173041.7218.19250151.241800.528602.263701.68860HepG2QKI
ZNF680ENSG00000173041.7401.18070204.788300.970004.977904.04660HepG2RAVER1
ZNF680ENSG00000173041.7452.23280280.636100.688305.995305.30510HepG2RBM22
ZNF680ENSG00000173041.7231.59450137.267000.754504.085003.27940HepG2RBM25
ZNF680ENSG00000173041.7236.39760155.423400.604902.761302.22060HepG2NELFE
ZNF680ENSG00000173041.7226.08960144.765900.643103.315702.64900HepG2RECQL
ZNF680ENSG00000173041.7118.28930271.71640-1.199808.523207.42450HepG2RPLP0
ZNF680ENSG00000173041.7110.56810210.04650-0.925804.384003.37660HepG2RPS3A
ZNF680ENSG00000173041.7589.10320292.190301.011504.953204.03470HepG2SF3A3
ZNF680ENSG00000173041.7208.83400145.392900.522302.237401.69850HepG2SF3B4
ZNF680ENSG00000173041.7237.65600310.61040-0.386202.188201.55190HepG2SLBP
ZNF680ENSG00000173041.7317.78610151.763601.066109.220208.46960HepG2SRSF1
ZNF680ENSG00000173041.7129.52580247.85730-0.936306.386205.39950HepG2SRSF7
ZNF680ENSG00000173041.7372.81500275.209300.437802.884802.36400HepG2SSB
ZNF680ENSG00000173041.7253.65000363.82690-0.520403.473402.79140HepG2SUCLG1
ZNF680ENSG00000173041.7360.80380136.424601.4030016.6262015.41950HepG2TAF15
ZNF680ENSG00000173041.7200.17980312.13720-0.640901.930901.31040HepG2TARDBP
ZNF680ENSG00000173041.7212.47150125.341200.761304.314203.27920HepG2TIA1
ZNF680ENSG00000173041.7133.39980242.08080-0.859705.349604.70080HepG2TIAL1
ZNF680ENSG00000173041.7222.90840316.49450-0.505702.887601.99260HepG2TUFM
ZNF680ENSG00000173041.7167.79340259.12760-0.627003.868303.06290HepG2UPF1
ZNF680ENSG00000173041.7182.10400266.35070-0.548603.095901.99480HepG2UTP18
ZNF680ENSG00000173041.7392.92220225.144300.803304.642803.28690HepG2XRCC6
ZNF680ENSG00000173041.7274.68450154.894700.826406.436805.48270HepG2ZC3H8
ZNF680ENSG00000173041.7623.35580833.52840-0.419203.038701.73600K562APOBEC3C
ZNF680ENSG00000173041.7554.14650789.13450-0.510003.742803.08080K562AQR
ZNF680ENSG00000173041.7137.85010216.03410-0.648203.108701.97600K562CCAR1
ZNF680ENSG00000173041.7632.74020933.40530-0.560902.737201.68490K562CNOT7
ZNF680ENSG00000173041.7642.59390943.19070-0.553605.210403.65880K562CPEB4
ZNF680ENSG00000173041.7379.29180548.67780-0.532704.150803.18740K562CPSF6
ZNF680ENSG00000173041.71269.34480949.200700.419203.555901.88730K562DDX19B
ZNF680ENSG00000173041.7629.22080975.76720-0.633009.917708.77470K562DDX47
ZNF680ENSG00000173041.71089.89750905.874300.266702.280301.49560K562DKC1
ZNF680ENSG00000173041.7317.40500438.11760-0.465003.250402.48150K562EIF2S2
ZNF680ENSG00000173041.7292.27980447.12560-0.613305.286604.20190K562EIF3G
ZNF680ENSG00000173041.7730.91320944.61720-0.370003.179502.17490K562EIF4G2
ZNF680ENSG00000173041.7402.01390535.02760-0.412402.487201.68460K562FIP1L1
ZNF680ENSG00000173041.7410.00850558.26500-0.445302.660001.82240K562FMR1
ZNF680ENSG00000173041.7323.11080524.47910-0.698907.186806.27470K562FXR1
ZNF680ENSG00000173041.7948.91220602.621400.654903.373002.57810K562G3BP2
ZNF680ENSG00000173041.7399.73660523.85300-0.390102.286401.56460K562GPKOW
ZNF680ENSG00000173041.7326.65040453.20070-0.472402.805801.65570K562HNRNPF
ZNF680ENSG00000173041.7546.84970881.88360-0.689408.147106.24830K562HNRNPL
ZNF680ENSG00000173041.7300.96000440.06190-0.548103.031502.05100K562HNRNPM
ZNF680ENSG00000173041.71120.31350893.389400.326402.154801.43740K562KIF1C
ZNF680ENSG00000173041.7465.21540681.66820-0.551202.810301.88030K562MATR3
ZNF680ENSG00000173041.7268.98920511.33870-0.926709.492407.80130K562METAP2
ZNF680ENSG00000173041.7537.56910690.50210-0.361203.478602.65130K562NSUN2
ZNF680ENSG00000173041.7297.75090638.78400-1.101202.811701.81280K562PABPN1
ZNF680ENSG00000173041.7475.73420607.35360-0.352402.055201.35160K562PPIG
ZNF680ENSG00000173041.7220.11410314.68730-0.515702.200101.52730K562PRPF8
ZNF680ENSG00000173041.7419.94030663.53230-0.660003.700302.94390K562PTBP1
ZNF680ENSG00000173041.7353.70060636.48690-0.847605.378604.16060K562RBM22
ZNF680ENSG00000173041.7478.53220669.74480-0.485002.445601.42860K562NELFE
ZNF680ENSG00000173041.7186.32250320.61030-0.783002.417101.65600K562RPS19
ZNF680ENSG00000173041.7295.31530450.79640-0.610203.515602.37520K562RPS3
ZNF680ENSG00000173041.7445.44350627.14470-0.493602.912802.03480K562SF3B4
ZNF680ENSG00000173041.7265.77120393.53450-0.566302.684201.67980K562SRFBP1
ZNF680ENSG00000173041.7558.89590698.08830-0.320802.677101.75310K562SRPK2
ZNF680ENSG00000173041.7294.91160650.43380-1.141109.003007.73650K562SRSF1
ZNF680ENSG00000173041.7325.86220435.21560-0.417502.246001.31620K562SRSF4
ZNF680ENSG00000173041.7215.94240437.69950-1.019308.571006.85210K562TIAL1
ZNF680ENSG00000173041.7519.14420732.15550-0.496005.637004.65110K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF680 is not available on ENCORE database.





10 RBPs can affect the splicing of ZNF680 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF680ENSG00000173041.7chr7-640046836400481064004084640041806402330264023419-0.296000.000300.00765excludedK562SF3B4
SEZNF680ENSG00000173041.7chr7-640040846400418063980261639828786402330264023400-0.289000.002320.05952excludedK562AKAP8L
SEZNF680ENSG00000173041.7chr7-6402132364021651640047236400481064023302640234530.702000.000010.00017includedHepG2U2AF2
SEZNF680ENSG00000173041.7chr7-6402132364021651640047236400481064023302640234530.244000.000460.00885includedK562PUS1
SEZNF680ENSG00000173041.7chr7-6402132364021651640047236400481064023302640234530.448000.004780.07864includedK562U2AF1
SEZNF680ENSG00000173041.7chr7-640213236402165164004723640048106402330264023453-0.255000.003320.06450excludedHepG2SRSF1
SEZNF680ENSG00000173041.7chr7-6402132364021651640047236400481064023302640234530.335000.000160.00833includedK562UTP18
SEZNF680ENSG00000173041.7chr7-6400468364004810640040846400418064023302640234190.366000.000050.00337includedK562TARDBP
SEZNF680ENSG00000173041.7chr7-640040846400418063980261639828786402330264023400-0.315000.000160.00630excludedK562RBM15
SEZNF680ENSG00000173041.7chr7-640040846400418063980261639828786402330264023400-0.597000.000490.02188excludedHepG2HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF680 is not avaliable on ENCORE database.