RP11-340I6.8

General Information

Gene Name       : RP11-340I6.8
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-340I6.8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-340I6.8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-340I6.8 RNA is bound by 4 proteins.  







eCLIP assay for RP11-340I6.8 is not avaliable on ENCORE database.





4 proteins are bound to RP11-340I6.8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr76336724063367283+intron-Distal4.769256.53595K562U2AF2
chr76337285463372927+intron-Distal3.054453.84857K562SRSF7
chr76336724063367280+intron-Distal4.351064.52791K562U2AF1
chr76337294163372955+intron-Distal3.878576.84055K562U2AF2
chr76336723963367277+intron-Distal5.020053.77802HepG2U2AF2
chr76337285263372926+intron-Distal3.379784.79107K562SRSF1
chr76337295563372978+intron-Distal3.878576.84055K562U2AF2
chr76337292563372975+intron-Distal5.997379.05715HepG2U2AF2
chr76337294163372974+intron-Distal4.600683.60286K562U2AF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-340I6.8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-340I6.8 is not available on ENCORE database.

  • No RBPs affect the gene expression of RP11-340I6.8 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for RP11-340I6.8 is not available on ENCORE database.






No RBPs affect the gene expression of RP11-340I6.8 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for RP11-340I6.8 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-340I6.8 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-340I6.8 is not avaliable on ENCORE database.