CD44

General Information

Gene Name       : CD44
Gene ID             : ENSG00000026508.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CD44)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CD44ENSG00000026508.18186.34179.83183.09ENCSR000AEF
HepG2CD44ENSG00000026508.180.100.090.10ENCSR985KAT
K562CD44ENSG00000026508.185.565.155.36ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CD44 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CD44 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CD44 is not avaliable on ENCORE database.






NO known proteins are bound to CD44 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CD44 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CD44 is not available on ENCORE database.

  • 76 RBPs can affect the levels of CD44.  








The Knockdown/knockout RNA-Seq assay for CD44 is not available on ENCORE database.





76 RBPs can affect the gene expression of CD44 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CD44ENSG00000026508.12102.661603.814804.7500024.9236023.51240HepG2ACO1
CD44ENSG00000026508.120.8941012.22400-3.773202.565301.83020HepG2CNOT7
CD44ENSG00000026508.1214.475602.328702.635902.369101.76670HepG2CELF1
CD44ENSG00000026508.1228.264900.0000099999.999907.967306.97040HepG2DDX6
CD44ENSG00000026508.120.000007.27340-99999.999991.851101.32600HepG2HNRNPLL
CD44ENSG00000026508.1290.597902.514205.1712022.8904021.07930HepG2PUM2
CD44ENSG00000026508.1269.223503.346404.3705012.2401010.84110HepG2RAVER1
CD44ENSG00000026508.12112.660202.737605.3628027.2061025.91340HepG2RBM22
CD44ENSG00000026508.1245.073705.659202.993506.980305.96910HepG2RPLP0
CD44ENSG00000026508.1217.823103.162202.494602.646601.98740HepG2SF3A3
CD44ENSG00000026508.1220.396602.340203.123503.836503.12060HepG2SRSF5
CD44ENSG00000026508.1220.788400.0000099999.999907.163506.35000HepG2SRSF9
CD44ENSG00000026508.12133.453006.084704.454905.732104.26320HepG2U2AF2
CD44ENSG00000026508.1229.828002.882103.371405.139103.75380HepG2UTP18
CD44ENSG00000026508.12126.1941049.135801.360703.035201.79160K562AARS
CD44ENSG00000026508.12432.80980166.325701.3796014.7849012.13360K562ABCF1
CD44ENSG00000026508.12278.4468065.957202.0777025.0013023.40450K562AGGF1
CD44ENSG00000026508.12143.9334068.634401.068303.987003.20070K562AKAP8L
CD44ENSG00000026508.1277.12440138.86440-0.848402.860901.59890K562APOBEC3C
CD44ENSG00000026508.12114.9365072.019500.674302.424801.57400K562ATP5C1
CD44ENSG00000026508.12144.7569049.606501.544902.850401.51330K562BCCIP
CD44ENSG00000026508.1292.5321047.960100.948002.666401.72400K562BCLAF1
CD44ENSG00000026508.12196.0999078.813001.315009.252707.09140K562CCDC124
CD44ENSG00000026508.12165.8724091.920600.851503.835702.31630K562CIRBP
CD44ENSG00000026508.12588.85260289.398701.024709.709906.92410K562CKAP4
CD44ENSG00000026508.12506.51120121.135802.0639026.5566023.53210K562CPEB4
CD44ENSG00000026508.12341.29800221.938600.620803.855302.93010K562CPSF6
CD44ENSG00000026508.12294.79080193.495200.607303.329502.25970K562CELF1
CD44ENSG00000026508.12136.7385063.814101.099405.161003.67520K562DDX3X
CD44ENSG00000026508.12297.49930125.319401.2472012.7192011.42950K562DDX47
CD44ENSG00000026508.1295.7868048.962800.968002.940601.55100K562DNAJC21
CD44ENSG00000026508.12155.7077065.208201.255604.791102.00580K562AGO1
CD44ENSG00000026508.12239.9424082.297001.543707.592406.48900K562EIF2S2
CD44ENSG00000026508.12107.63960200.88160-0.900104.868503.14060K562EXOSC5
CD44ENSG00000026508.12413.96050225.789500.874406.791905.42910K562FMR1
CD44ENSG00000026508.12413.36370191.364901.111008.142806.48450K562FTO
CD44ENSG00000026508.12127.3913075.160700.761102.898701.73130K562GLRX3
CD44ENSG00000026508.12516.05740211.908201.2840015.5615013.64460K562GPKOW
CD44ENSG00000026508.12128.2850048.002101.418106.515504.67400K562HNRNPF
CD44ENSG00000026508.12200.9689085.650001.230307.211105.13970K562HNRNPK
CD44ENSG00000026508.1239.2897070.61300-0.845802.090301.31520K562HNRNPU
CD44ENSG00000026508.12149.6400085.802500.802302.906101.84740K562IGF2BP2
CD44ENSG00000026508.12560.31950180.913101.6309014.6774012.39410K562KRR1
CD44ENSG00000026508.12138.5210052.071201.411407.189204.83030K562LARP7
CD44ENSG00000026508.12159.5159081.587200.967204.765803.50810K562MBNL1
CD44ENSG00000026508.12354.93800206.841200.778902.841401.95160K562METAP2
CD44ENSG00000026508.12113.0618057.187600.983203.053902.12000K562NAA15
CD44ENSG00000026508.12155.2331066.575701.221306.266104.44820K562NCBP2
CD44ENSG00000026508.12132.8503087.795500.597502.040301.38820K562NSUN2
CD44ENSG00000026508.12229.6156080.193301.5176011.548009.46360K562PCBP2
CD44ENSG00000026508.12109.55740255.52210-1.221807.120705.78550K562PCBP3
CD44ENSG00000026508.1260.66480196.01030-1.6920010.463108.95010K562POLR2G
CD44ENSG00000026508.12231.85650135.757400.772104.226403.18280K562PPIG
CD44ENSG00000026508.12175.0860094.559300.888703.265601.31680K562PPIL4
CD44ENSG00000026508.12116.5010054.199901.103903.581402.72670K562PRPF8
CD44ENSG00000026508.12165.0381048.189001.7759010.281808.29410K562PSIP1
CD44ENSG00000026508.1250.6980087.57710-0.788602.340901.72310K562PTBP1
CD44ENSG00000026508.12499.85890178.948901.4819021.0974018.58340K562PUM2
CD44ENSG00000026508.12162.2197068.045501.253306.068205.30210K562PUS1
CD44ENSG00000026508.12118.4622055.694801.088703.386801.78460K562RAVER1
CD44ENSG00000026508.12125.9281066.317500.925003.831003.14990K562RBM15
CD44ENSG00000026508.12219.0079083.955601.3832010.639808.83130K562RBM22
CD44ENSG00000026508.1289.5794043.978701.026302.190101.31210K562RCC2
CD44ENSG00000026508.12153.0317055.197901.471006.665605.38770K562RPS19
CD44ENSG00000026508.1289.02830174.59930-0.971703.528302.29980K562SAFB
CD44ENSG00000026508.12212.8306046.370302.198309.627907.03940K562SERBP1
CD44ENSG00000026508.12190.3089063.081101.593005.587503.68810K562SF1
CD44ENSG00000026508.12323.4508086.640401.9003023.9127021.75370K562SF3A3
CD44ENSG00000026508.121020.82950201.490502.3409012.2021010.08560K562SF3B1
CD44ENSG00000026508.12146.9414060.670101.276104.895603.74290K562SF3B4
CD44ENSG00000026508.12363.8989088.765802.0354030.5018028.03480K562SRPK2
CD44ENSG00000026508.12100.18040196.58120-0.972505.416604.26080K562SYNCRIP
CD44ENSG00000026508.12255.24990139.830800.868105.278403.22050K562TRIP6
CD44ENSG00000026508.12197.8509090.719501.124807.442805.31040K562TROVE2
CD44ENSG00000026508.12148.6916056.549701.394606.989505.08760K562U2AF1
CD44ENSG00000026508.12245.8511058.416902.0732022.3295020.02950K562U2AF2
CD44ENSG00000026508.12304.49180193.590400.653303.666802.03160K562UBE2L3
CD44ENSG00000026508.12274.4836093.091901.5599011.041009.72320K562UPF1
CD44ENSG00000026508.12211.1195069.012301.613008.620106.04210K562UTP18
CD44ENSG00000026508.121379.67940151.267003.1891041.1054037.48530K562UTP3
CD44ENSG00000026508.12142.5993082.837200.783502.425101.62930K562WDR43
CD44ENSG00000026508.12279.00290154.284000.854605.874703.99620K562WRN
CD44ENSG00000026508.12344.89440209.076700.722003.392301.34720K562ZNF800
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CD44 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CD44 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CD44 is not avaliable on ENCORE database.