PCGF2

General Information

Gene Name       : PCGF2
Gene ID             : ENSG00000277258.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PCGF2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PCGF2ENSG00000277258.44.056.905.47ENCSR000AEF
HepG2PCGF2ENSG00000277258.449.9518.6434.30ENCSR985KAT
K562PCGF2ENSG00000277258.412.849.4011.12ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PCGF2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PCGF2 RNA is bound by 28 proteins.  







eCLIP assay for PCGF2 is not avaliable on ENCORE database.





28 proteins are bound to PCGF2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr173689157336891654-3'-UTR,CDS,intron-Distal4.774737.16588HepG2LARP4
chr173689109536891179-3'-UTR,intron-Distal3.674943.16048K562DDX6
chr173689162336891658-3'-UTR,CDS,intron-Distal4.0577213.56526HepG2PCBP2
chr173689135236891400-3'-UTR,intron-Distal,intron-Proximal3.259295.76195K562PUM2
chr173689159036891714-3'-UTR,CDS,intron-Distal5.0026916.67853K562PCBP1
chr173689071536890782-3'-UTR,intron-Distal4.839198.45066HepG2DDX55
chr173689152836891587-3'-UTR,CDS,intron-Distal4.137964.33022HepG2HNRNPK
chr173689118036891228-3'-UTR,intron-Distal,intron-Proximal4.070393.95344K562PUM2
chr173689151736891551-3'-UTR,CDS,intron-Distal3.375183.01032HepG2LARP4
chr173689662736896699-3'-UTR,CDS,intron-Distal,intron-Proximal4.0641423.20884HepG2DDX59
chr173689590236895933-3'-UTR,CDS,intron-Distal4.414675.60746K562YBX3
chr173689135336891434-3'-UTR,intron-Distal,intron-Proximal3.3476110.33829HepG2PCBP2
chr173689165836891729-3'-UTR,CDS,intron-Distal3.7231711.75124HepG2PCBP2
chr173689143436891482-3'-UTR,CDS,intron-Distal3.260425.42346HepG2PCBP2
chr173689592636895979-3'-UTR,CDS,intron-Distal,intron-Proximal3.463793.96535HepG2AQR
chr173689156236891715-3'-UTR,CDS,intron-Distal5.4419952.84582HepG2DDX59
chr173689158736891732-3'-UTR,CDS,intron-Distal3.8312512.69756HepG2HNRNPK
chr173689134936891429-3'-UTR,intron-Distal,intron-Proximal4.233888.54919HepG2PTBP1
chr173689587036895902-3'-UTR,CDS,intron-Distal3.478054.91258K562YBX3
chr173689128436891332-3'-UTR,intron-Distal,intron-Proximal6.608798.89419K562PUM2
chr173689160236891623-3'-UTR,CDS,intron-Distal4.3175710.50890HepG2PCBP2
chr173689160236891702-3'-UTR,CDS,intron-Distal4.217339.57560HepG2PCBP1
chr173689156036891602-3'-UTR,CDS,intron-Distal4.294018.29139HepG2PCBP2
chr173689152536891650-3'-UTR,CDS,intron-Distal3.517975.39047HepG2IGF2BP3
chr173689152036891562-3'-UTR,CDS,intron-Distal6.1844614.13072HepG2DDX59
chr173690434836904447-5'-UTR,intron-Distal,intron-Proximal4.646214.96013K562PRPF8
chr173690457236904624-5'-UTR,intron-Distal,intron-Proximal6.5834312.30102HepG2PCBP2
chr173690444336904491-5'-UTR,intron-Distal,intron-Proximal5.3354323.73582HepG2DDX59
chr173690440736904450-5'-UTR,intron-Distal,intron-Proximal4.159957.37756HepG2AQR
chr173690443836904498-5'-UTR,intron-Distal,intron-Proximal5.5149425.74930HepG2PCBP2
chr173690435836904422-5'-UTR,intron-Distal,intron-Proximal3.994306.39201HepG2RBM22
chr173690452836904599-5'-UTR,intron-Distal,intron-Proximal4.8277621.23563HepG2DDX59
chr173690457436904641-5'-UTR,intron-Distal,intron-Proximal3.734284.09699HepG2HNRNPK
chr173690444336904501-5'-UTR,intron-Distal,intron-Proximal5.346767.19722HepG2HNRNPK
chr173690420036904256-5'-UTR,intron-Distal,intron-Proximal4.6966716.50354HepG2DDX59
chr173690438036904399-5'-UTR,intron-Distal,intron-Proximal4.103313.11721K562AQR
chr173690420536904263-5'-UTR,intron-Distal,intron-Proximal4.280443.03891HepG2PTBP1
chr173690451536904572-5'-UTR,intron-Distal,intron-Proximal5.1105617.54811HepG2PCBP2
chr173690439936904440-5'-UTR,intron-Distal,intron-Proximal4.419445.97994K562AQR
chr173690439636904452-5'-UTR,intron-Distal,intron-Proximal3.7772116.24651HepG2PRPF8
chr173690450536904581-5'-UTR,intron-Distal,intron-Proximal5.671087.30415HepG2PCBP1
chr173690283436902879-5'-UTR,intron-Distal3.781395.62912HepG2CSTF2T
chr173690430436904355-5'-UTR,intron-Distal,intron-Proximal3.835655.86001HepG2CSTF2T
chr173690592936906047-5'-UTR,intron-Distal5.090477.76881HepG2NCBP2
chr173689180536891854-CDS,intron-Distal,intron-Proximal4.183834.55951HepG2PCBP2
chr173689541236895469-CDS,intron-Distal,intron-Proximal6.9631916.30191HepG2PRPF8
chr173689232636892379-CDS,intron-Distal,intron-Proximal3.2697710.14543HepG2PPIG
chr173689234236892402-CDS,intron-Distal,intron-Proximal4.407135.24403K562IGF2BP2
chr173689654336896655-CDS,intron-Distal,intron-Proximal3.109095.52540HepG2IGF2BP1
chr173689231636892377-CDS,intron-Distal,intron-Proximal3.127265.81406HepG2GRWD1
chr173689230536892360-CDS,intron-Distal,intron-Proximal3.574995.10493HepG2AQR
chr173689654536896613-CDS,intron-Distal3.578835.26527K562IGF2BP2
chr173689531836895351-CDS,intron-Distal,intron-Proximal3.0291611.91657HepG2PPIG
chr173689649936896564-CDS,intron-Distal,intron-Proximal3.5124916.51264HepG2PRPF8
chr173689234336892379-CDS,intron-Distal3.147716.71422HepG2DDX59
chr173689237936892424-CDS,intron-Distal,intron-Proximal3.120228.29694HepG2PPIG
chr173689484536894848-CDS,intron-Distal3.211748.65665K562YBX3
chr173689656836896642-CDS,intron-Distal3.178033.27329HepG2IGF2BP3
chr173689181736891854-CDS,intron-Distal,intron-Proximal3.179924.94039K562YBX3
chr173689500836895039-CDS,intron-Distal4.0724413.17111K562YBX3
chr173689452136894611-CDS,intron-Distal,intron-Proximal4.792564.48002K562AQR
chr173689480736894839-CDS,intron-Distal3.6244311.50948HepG2PPIG
chr173689228136892344-CDS,intron-Distal,intron-Proximal4.930989.56266K562AQR
chr173689234236892385-CDS,intron-Distal,intron-Proximal3.851339.88356K562YBX3
chr173689500436895032-CDS,intron-Distal,intron-Proximal3.649858.31208HepG2PPIG
chr173689495836895009-CDS,intron-Distal,intron-Proximal4.6608017.15802HepG2PRPF8
chr173689578736895840-CDS,intron-Distal,intron-Proximal3.315226.93483HepG2PRPF8
chr173689234136892363-CDS,intron-Distal,intron-Proximal3.197924.18772HepG2IGF2BP3
chr173689184036891886-CDS,intron-Distal,intron-Proximal4.215043.59236HepG2AQR
chr173689654336896612-CDS,intron-Distal,intron-Proximal3.167956.87969HepG2GRWD1
chr173689531636895329-CDS,intron-Distal,intron-Proximal3.335343.60157HepG2GRWD1
chr173689460436894664-CDS,intron-Distal,intron-Proximal3.1252511.69203HepG2PPIG
chr173689532936895358-CDS,intron-Distal,intron-Proximal3.739995.97027HepG2GRWD1
chr173689500436895008-CDS,intron-Distal,intron-Proximal3.8121210.50040K562YBX3
chr173689484136894845-CDS,intron-Distal3.222978.76160K562YBX3
chr173689461936894701-CDS,intron-Distal,intron-Proximal3.102014.26233HepG2YBX3
chr173690404536904121-intron-Distal,intron-Proximal3.535085.00859HepG2RBFOX2
chr173690238036902440-intron-Distal3.463864.35585HepG2RBFOX2
chr173689670236896755-intron-Distal,intron-Proximal3.239463.10102HepG2SF3B4
chr173689491036894970-intron-Distal,intron-Proximal3.483347.67127HepG2RBM22
chr173689917436899242-intron-Distal5.340968.52451K562EIF4G2
chr173690377736903812-intron-Distal3.524394.92762HepG2CSTF2T
chr173690254936902588-intron-Distal3.803444.33898HepG2FAM120A
chr173690388636903937-intron-Distal3.156944.51156HepG2CSTF2T
chr173689233536892342-intron-Distal,intron-Proximal3.928879.05128HepG2PRPF8
chr173690250436902581-intron-Distal3.893933.26022HepG2PRPF4
chr173689472736894773-intron-Distal,intron-Proximal4.626926.01148HepG2EFTUD2
chr173690259136902701-intron-Distal4.3232811.71889HepG2RBFOX2
chr173690253636902591-intron-Distal5.255817.98567HepG2RBFOX2
chr173690234736902431-intron-Distal3.975693.55086HepG2RBM5
chr173690444036904448-intron-Distal,intron-Proximal4.060864.98250K562AQR
chr173690224436902306-intron-Distal3.297605.68177HepG2CSTF2T
chr173690250536902614-intron-Distal4.377964.00200K562EIF4G2
chr173690353936903589-intron-Distal3.993756.10842HepG2CSTF2T
chr173689642136896528-intron-Distal,intron-Proximal4.757188.01982HepG2EFTUD2
chr173689243536892482-intron-Distal,intron-Proximal3.879513.25678HepG2SF3B4
chr173689471736894773-intron-Distal,intron-Proximal4.502145.28859HepG2SF3B4
chr173690368036903737-intron-Distal5.165888.65695HepG2NKRF
chr173689228936892334-intron-Distal,intron-Proximal3.6554210.94397HepG2PRPF8
chr173690247836902536-intron-Distal4.728593.65854HepG2RBFOX2
chr173689513236895182-intron-Distal,intron-Proximal3.481254.76523HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PCGF2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PCGF2 is not available on ENCORE database.

  • 95 RBPs can affect the levels of PCGF2.  








The Knockdown/knockout RNA-Seq assay for PCGF2 is not available on ENCORE database.





95 RBPs can affect the gene expression of PCGF2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PCGF2ENSG00000056661.92054.307002608.09580-0.344302.721101.78580HepG2ABCF1
PCGF2ENSG00000056661.91203.555501691.35080-0.490901.890201.44100HepG2AKAP1
PCGF2ENSG00000056661.91332.462601549.97140-0.218102.135501.45030HepG2AKAP8L
PCGF2ENSG00000056661.91964.440301399.316700.489303.347302.48310HepG2ASCC1
PCGF2ENSG00000056661.91493.174801988.48570-0.413306.573605.58540HepG2AUH
PCGF2ENSG00000056661.9718.69840971.00600-0.434102.924301.99890HepG2BCLAF1
PCGF2ENSG00000056661.91636.312402325.94130-0.507406.063505.21700HepG2BOP1
PCGF2ENSG00000056661.9811.347801589.58560-0.9703017.3321015.70390HepG2CALR
PCGF2ENSG00000056661.92735.080202147.477700.348803.495102.25670HepG2CPSF7
PCGF2ENSG00000056661.9672.090701034.20590-0.621804.314702.48370HepG2CSTF2T
PCGF2ENSG00000056661.9720.067401113.24430-0.628607.067806.03480HepG2DDX21
PCGF2ENSG00000056661.9863.534101090.06690-0.336102.648701.75700HepG2DDX24
PCGF2ENSG00000056661.9696.810701028.06820-0.561103.360001.95200HepG2DDX27
PCGF2ENSG00000056661.9548.81180832.22490-0.600703.081001.60650HepG2DDX28
PCGF2ENSG00000056661.91315.735101020.244900.366903.156701.71070HepG2DDX52
PCGF2ENSG00000056661.9815.121001098.97320-0.431102.736901.96670HepG2DDX55
PCGF2ENSG00000056661.91168.013401955.43450-0.7434010.298108.49490HepG2DDX5
PCGF2ENSG00000056661.91145.082001476.05400-0.366304.824103.97490HepG2DKC1
PCGF2ENSG00000056661.91373.73580998.527300.460102.527601.85070HepG2DNAJC21
PCGF2ENSG00000056661.91290.70300989.819700.382805.014704.17720HepG2DNAJC2
PCGF2ENSG00000056661.9995.745801477.97540-0.569802.430101.82930HepG2EIF4A3
PCGF2ENSG00000056661.91997.498101636.826900.287202.380101.62290HepG2EIF4G2
PCGF2ENSG00000056661.91101.531101507.50360-0.452704.977403.85970HepG2EWSR1
PCGF2ENSG00000056661.92076.874302633.47820-0.342602.229601.53450HepG2FIP1L1
PCGF2ENSG00000056661.9753.306901350.11180-0.841802.652201.88310HepG2FUBP3
PCGF2ENSG00000056661.91871.184302420.39280-0.371302.737602.09960HepG2GPKOW
PCGF2ENSG00000056661.91922.569601402.348000.455102.564801.89140HepG2HNRNPK
PCGF2ENSG00000056661.91320.793202309.83710-0.8064011.9412010.75010HepG2HNRNPLL
PCGF2ENSG00000056661.91338.667001816.78560-0.440605.237103.97350HepG2HNRNPM
PCGF2ENSG00000056661.91826.347401113.938900.7132017.5457016.12260HepG2HNRNPU
PCGF2ENSG00000056661.9695.49610946.06580-0.443903.981602.03580HepG2CCAR2
PCGF2ENSG00000056661.91544.737202131.04540-0.464205.763104.63640HepG2MSI2
PCGF2ENSG00000056661.91448.18390774.452600.902907.431305.07250HepG2NOLC1
PCGF2ENSG00000056661.9805.140301367.43870-0.764203.458302.65700HepG2PABPC4
PCGF2ENSG00000056661.9865.587401185.02510-0.453202.328801.37290HepG2PCBP2
PCGF2ENSG00000056661.91020.652001751.48990-0.7791020.0216018.27640HepG2PRPF4
PCGF2ENSG00000056661.9557.36360847.33840-0.604305.392204.30340HepG2PRPF8
PCGF2ENSG00000056661.92150.288501740.314300.305103.958003.27630HepG2PUM1
PCGF2ENSG00000056661.91251.535201738.96460-0.474504.306103.47990HepG2PUM2
PCGF2ENSG00000056661.91219.852101571.47590-0.365405.591204.77180HepG2PUS1
PCGF2ENSG00000056661.9361.990301143.17090-1.6590014.2190012.73610HepG2RAVER1
PCGF2ENSG00000056661.91977.58050847.327101.222604.324901.98960HepG2RBM17
PCGF2ENSG00000056661.91241.015701908.24800-0.6207011.8130010.89680HepG2RBM22
PCGF2ENSG00000056661.9964.493401444.01680-0.582206.941005.91240HepG2RBM25
PCGF2ENSG00000056661.91063.011801684.89440-0.664508.856807.74210HepG2RPLP0
PCGF2ENSG00000056661.9597.49330838.15080-0.488303.646702.76130HepG2RRP9
PCGF2ENSG00000056661.91267.07280991.990400.353004.766603.96020HepG2SAFB2
PCGF2ENSG00000056661.91715.80810818.543401.067703.553901.97300HepG2SF1
PCGF2ENSG00000056661.91813.789702286.20800-0.333902.858102.14070HepG2SF3B1
PCGF2ENSG00000056661.91140.322201529.50000-0.423606.027305.21150HepG2SF3B4
PCGF2ENSG00000056661.92149.33590794.535201.435605.450003.30020HepG2SFPQ
PCGF2ENSG00000056661.91639.51040731.746001.163804.434502.69510HepG2SNRNP200
PCGF2ENSG00000056661.91779.846002155.27090-0.276104.105003.52980HepG2SRFBP1
PCGF2ENSG00000056661.9920.031601596.51690-0.7952019.5447018.52900HepG2SRSF1
PCGF2ENSG00000056661.92142.181201618.720100.404104.731103.94970HepG2SRSF5
PCGF2ENSG00000056661.91098.139701871.24170-0.7689021.6748020.53680HepG2SSB
PCGF2ENSG00000056661.9690.660401093.88600-0.663405.236704.35310HepG2SUPV3L1
PCGF2ENSG00000056661.9918.147201435.15040-0.6444010.721709.73310HepG2TAF15
PCGF2ENSG00000056661.92918.590502251.718000.374103.515002.70850HepG2TARDBP
PCGF2ENSG00000056661.9915.706101318.56050-0.526006.308305.05120HepG2TIA1
PCGF2ENSG00000056661.9794.264501082.26300-0.446404.627404.01560HepG2TIAL1
PCGF2ENSG00000056661.91391.824601092.084500.349804.696004.00040HepG2TRIM56
PCGF2ENSG00000056661.92840.108402252.587400.334302.728202.10340HepG2U2AF1
PCGF2ENSG00000056661.92935.13310850.911001.786208.852306.98900HepG2U2AF2
PCGF2ENSG00000056661.9856.14270646.106800.406002.296801.60410HepG2UCHL5
PCGF2ENSG00000056661.92535.088502054.911600.302904.935804.04480HepG2UPF1
PCGF2ENSG00000056661.92455.483301983.933600.307504.106403.39880HepG2UTP3
PCGF2ENSG00000056661.91176.383401728.45640-0.5551012.7885011.51750HepG2ZC3H8
PCGF2ENSG00000056661.91519.807802260.00680-0.5724017.1901016.11750HepG2ZNF622
PCGF2ENSG00000056661.91336.00170832.254400.682709.645608.66760K562AGGF1
PCGF2ENSG00000056661.91203.35180914.519300.395903.443502.31930K562AKAP8
PCGF2ENSG00000056661.91165.22450865.997800.428102.643002.00350K562AKAP8L
PCGF2ENSG00000056661.9781.42990537.385400.540103.737502.47410K562CCAR1
PCGF2ENSG00000056661.91224.87070994.591600.300402.541701.42250K562CCDC124
PCGF2ENSG00000056661.91244.947701000.025300.315903.027401.86550K562CPEB4
PCGF2ENSG00000056661.9857.99550601.665000.511902.777501.44670K562DHX30
PCGF2ENSG00000056661.91228.42680931.879500.398504.769703.56940K562DKC1
PCGF2ENSG00000056661.9302.06800461.06900-0.610103.718202.20350K562EEF2
PCGF2ENSG00000056661.9532.98890418.321600.349402.454601.38790K562EIF4B
PCGF2ENSG00000056661.9130.01130292.48190-1.169707.860906.54200K562G3BP2
PCGF2ENSG00000056661.9969.25530622.860000.637902.514701.36800K562HNRNPA2B1
PCGF2ENSG00000056661.9636.17120481.692700.401202.588301.48840K562HNRNPF
PCGF2ENSG00000056661.91014.68560741.834400.451805.042003.82390K562HNRNPU
PCGF2ENSG00000056661.9534.40860365.889400.546403.134402.01860K562IGF2BP2
PCGF2ENSG00000056661.9502.02320372.027600.432202.424801.32940K562IGF2BP3
PCGF2ENSG00000056661.9647.13690481.147400.427503.102701.45690K562LSM11
PCGF2ENSG00000056661.91192.56470879.747900.438803.795002.46850K562MAK16
PCGF2ENSG00000056661.91435.027101029.559200.479005.639404.25040K562MBNL1
PCGF2ENSG00000056661.9769.13430592.974700.375202.671401.81380K562METAP2
PCGF2ENSG00000056661.91197.625401042.040400.200701.954201.31400K562NSUN2
PCGF2ENSG00000056661.91006.50200544.699800.885704.446803.11250K562PABPN1
PCGF2ENSG00000056661.91132.04940647.463300.806003.440701.75200K562PPP1R8
PCGF2ENSG00000056661.9759.33450483.544500.651006.287704.83880K562PSIP1
PCGF2ENSG00000056661.91338.60100858.836600.640202.870502.31950K562PUS1
PCGF2ENSG00000056661.9152.27380279.02830-0.873703.262701.70210K562RAVER1
PCGF2ENSG00000056661.91294.11210836.803200.628909.817708.72750K562RBM15
PCGF2ENSG00000056661.9592.86990441.341500.425702.844901.83980K562RCC2
PCGF2ENSG00000056661.91235.40110607.095401.024905.397703.31510K562SFPQ
PCGF2ENSG00000056661.9661.64450418.362400.661204.622803.20210K562SRFBP1
PCGF2ENSG00000056661.9530.97910366.003300.536704.079503.22760K562SRSF1
PCGF2ENSG00000056661.9631.95250455.639100.471803.309002.14380K562SRSF4
PCGF2ENSG00000056661.9614.09020370.340600.729506.665105.52570K562TARDBP
PCGF2ENSG00000056661.9542.25070357.256000.601902.899502.05950K562TIA1
PCGF2ENSG00000056661.9624.83110465.068300.425902.408901.53940K562TIAL1
PCGF2ENSG00000056661.9497.15320350.760600.503103.234702.03700K562TRA2A
PCGF2ENSG00000056661.9775.98000494.264400.650604.475003.20760K562TRIM56
PCGF2ENSG00000056661.9828.38510983.11920-0.247102.317001.53710K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PCGF2 is not available on ENCORE database.





2 RBPs can affect the splicing of PCGF2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPCGF2ENSG00000056661.9chr17-368950013689511436894793368948483689532036895371-0.127000.005080.07706excludedHepG2U2AF1
A3SSPCGF2ENSG00000056661.9chr17-3689500536895211368950053689511436895320368953710.144000.000000.00000longerK562AQR
A3SSPCGF2ENSG00000056661.9chr17-3689234236892492368923423689242336894605368947010.137000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PCGF2 is not avaliable on ENCORE database.