HMGB1P5

General Information

Gene Name       : HMGB1P5
Gene ID             : ENSG00000132967.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HMGB1P5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HMGB1P5ENSG00000132967.9147.2595.99121.62ENCSR000AEF
HepG2HMGB1P5ENSG00000132967.937.75108.3773.06ENCSR985KAT
K562HMGB1P5ENSG00000132967.949.1961.7155.45ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HMGB1P5 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on HMGB1P5 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for HMGB1P5 is not avaliable on ENCORE database.






NO known proteins are bound to HMGB1P5 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for HMGB1P5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HMGB1P5 is not available on ENCORE database.

  • 107 RBPs can affect the levels of HMGB1P5.  








The Knockdown/knockout RNA-Seq assay for HMGB1P5 is not available on ENCORE database.





107 RBPs can affect the gene expression of HMGB1P5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HMGB1P5ENSG00000132967.9275.11600424.53640-0.625801.877801.43000HepG2AKAP1
HMGB1P5ENSG00000132967.9168.90620331.97160-0.974803.389102.55170HepG2AKAP8L
HMGB1P5ENSG00000132967.9189.01110351.29780-0.894202.984002.16880HepG2ASCC1
HMGB1P5ENSG00000132967.9258.11510425.29630-0.720506.595405.60600HepG2AUH
HMGB1P5ENSG00000132967.9186.10360367.22740-0.980603.448802.44860HepG2BCLAF1
HMGB1P5ENSG00000132967.971.57810306.86000-2.1000019.2240017.85770HepG2BOP1
HMGB1P5ENSG00000132967.9103.15250169.62850-0.717602.688001.47610HepG2BUD13
HMGB1P5ENSG00000132967.9133.28590335.33570-1.331104.385403.14310HepG2CCAR1
HMGB1P5ENSG00000132967.9187.70720333.74760-0.830302.359401.64090HepG2CIRBP
HMGB1P5ENSG00000132967.9154.22230330.36610-1.099105.114504.26130HepG2CKAP4
HMGB1P5ENSG00000132967.9184.45590281.71220-0.610901.919701.33580HepG2CPSF6
HMGB1P5ENSG00000132967.967.22440165.38450-1.298808.007306.29230HepG2YBX3
HMGB1P5ENSG00000132967.9294.55420470.19440-0.674706.568105.65760HepG2CELF1
HMGB1P5ENSG00000132967.9359.48690505.71250-0.492403.592202.76730HepG2DAZAP1
HMGB1P5ENSG00000132967.9187.77730305.55720-0.702402.529001.72890HepG2DDX19B
HMGB1P5ENSG00000132967.9100.39510283.09130-1.495602.552901.89800HepG2DDX21
HMGB1P5ENSG00000132967.9229.23020406.73730-0.827302.722602.10060HepG2DDX3X
HMGB1P5ENSG00000132967.9168.76100415.42820-1.299607.899806.67150HepG2DDX55
HMGB1P5ENSG00000132967.9162.94590319.90550-0.973304.730303.46190HepG2DDX59
HMGB1P5ENSG00000132967.9180.00740349.24620-0.956203.384302.70860HepG2DDX6
HMGB1P5ENSG00000132967.982.64340156.63330-0.922404.203903.00730HepG2DHX30
HMGB1P5ENSG00000132967.9184.74550316.06370-0.774703.480402.73350HepG2DKC1
HMGB1P5ENSG00000132967.966.79970162.40050-1.281607.012405.93340HepG2DNAJC21
HMGB1P5ENSG00000132967.973.80740160.95870-1.124906.893605.92960HepG2DNAJC2
HMGB1P5ENSG00000132967.995.22600335.88730-1.818507.420506.48490HepG2EIF2S1
HMGB1P5ENSG00000132967.9111.76150371.26670-1.732005.215504.33940HepG2EIF4A3
HMGB1P5ENSG00000132967.9328.55950498.79740-0.602305.657904.53400HepG2EIF4G1
HMGB1P5ENSG00000132967.9230.43290477.83740-1.0522011.014209.44900HepG2EIF4G2
HMGB1P5ENSG00000132967.9271.93160488.32590-0.844609.194308.20420HepG2ETF1
HMGB1P5ENSG00000132967.9207.05800401.66690-0.956006.341604.70270HepG2FUS
HMGB1P5ENSG00000132967.9227.70330374.37530-0.717302.124401.51460HepG2FXR1
HMGB1P5ENSG00000132967.9148.00900347.40230-1.230903.727602.95840HepG2G3BP1
HMGB1P5ENSG00000132967.9126.23140319.33720-1.3390010.242009.06500HepG2GPKOW
HMGB1P5ENSG00000132967.978.32730163.95620-1.065704.623803.81750HepG2HNRNPA1
HMGB1P5ENSG00000132967.9349.09600464.69760-0.412702.922501.96590HepG2HNRNPA2B1
HMGB1P5ENSG00000132967.9105.04730182.36840-0.795803.283502.53400HepG2HNRNPC
HMGB1P5ENSG00000132967.9144.08380335.41570-1.219003.109802.35230HepG2HNRNPF
HMGB1P5ENSG00000132967.9234.87580460.70720-0.972009.008407.85890HepG2HNRNPL
HMGB1P5ENSG00000132967.979.50270304.74990-1.9385018.3880016.97810HepG2HNRNPLL
HMGB1P5ENSG00000132967.9149.4904026.463202.497907.298003.89870HepG2HNRNPUL1
HMGB1P5ENSG00000132967.9115.81480330.29930-1.512005.147904.19120HepG2IGF2BP1
HMGB1P5ENSG00000132967.9163.38200353.16750-1.112103.519702.76780HepG2IGF2BP2
HMGB1P5ENSG00000132967.9115.55600185.05240-0.679303.373702.57050HepG2ILF2
HMGB1P5ENSG00000132967.9178.58380302.02990-0.758102.272801.34680HepG2KIF1C
HMGB1P5ENSG00000132967.940.66560185.04840-2.186006.695705.49020HepG2MSI2
HMGB1P5ENSG00000132967.9148.01870310.81730-1.070303.180402.13520HepG2MTPAP
HMGB1P5ENSG00000132967.9304.50870501.45600-0.719605.051404.02400HepG2NOL12
HMGB1P5ENSG00000132967.9411.41520258.975400.667704.439001.89910HepG2NUSAP1
HMGB1P5ENSG00000132967.9226.31930107.014701.080504.715002.66210HepG2PA2G4
HMGB1P5ENSG00000132967.9152.45770343.47790-1.171804.274403.38910HepG2PABPC4
HMGB1P5ENSG00000132967.9226.25360358.15880-0.662705.147204.36030HepG2PCBP1
HMGB1P5ENSG00000132967.9181.15120118.367400.613802.605101.41390HepG2PKM
HMGB1P5ENSG00000132967.947.99360161.58330-1.7514012.4189010.92530HepG2PPIL4
HMGB1P5ENSG00000132967.9141.37190220.04920-0.638303.379102.53200HepG2PRPF4
HMGB1P5ENSG00000132967.9170.79010478.64540-1.4867015.0661013.82600HepG2PUF60
HMGB1P5ENSG00000132967.9360.07970508.05830-0.496704.463103.74950HepG2PUM1
HMGB1P5ENSG00000132967.9248.24180507.71510-1.0323012.1134010.76790HepG2PUM2
HMGB1P5ENSG00000132967.9185.96960336.47770-0.855403.674602.98570HepG2PUS1
HMGB1P5ENSG00000132967.9254.04320394.67610-0.635604.477203.70930HepG2QKI
HMGB1P5ENSG00000132967.9254.2415029.015803.1312012.998509.48300HepG2RBM17
HMGB1P5ENSG00000132967.9237.18460408.14400-0.783107.111606.37150HepG2RBM22
HMGB1P5ENSG00000132967.9223.57020358.21030-0.680103.439602.69370HepG2RBM25
HMGB1P5ENSG00000132967.9100.81210361.16630-1.841006.942905.93350HepG2RPLP0
HMGB1P5ENSG00000132967.9196.62060360.41430-0.874203.366302.32430HepG2RPS10
HMGB1P5ENSG00000132967.9179.44720317.19460-0.821802.988602.17520HepG2RRP9
HMGB1P5ENSG00000132967.9110.13150161.33510-0.550802.198801.61310HepG2SAFB2
HMGB1P5ENSG00000132967.9180.38570301.63900-0.741704.418503.54540HepG2SF3B1
HMGB1P5ENSG00000132967.9255.72880379.41370-0.569203.911003.22810HepG2SF3B4
HMGB1P5ENSG00000132967.9236.89780458.85420-0.953803.525702.74930HepG2SLBP
HMGB1P5ENSG00000132967.9152.7300025.051902.607908.753606.18470HepG2SNRNP200
HMGB1P5ENSG00000132967.9121.79140335.62740-1.4624010.047608.56530HepG2SNRNP70
HMGB1P5ENSG00000132967.9280.30670460.97300-0.717707.544806.82860HepG2SRFBP1
HMGB1P5ENSG00000132967.9258.89480472.53880-0.868107.602906.63330HepG2SRSF5
HMGB1P5ENSG00000132967.9140.03150329.49820-1.234503.153902.41630HepG2SRSF7
HMGB1P5ENSG00000132967.9238.05800322.21300-0.436702.534302.00080HepG2SRSF9
HMGB1P5ENSG00000132967.9195.25660400.21520-1.0354012.3243011.39300HepG2SSB
HMGB1P5ENSG00000132967.9174.36920100.981400.788003.394302.16260HepG2STIP1
HMGB1P5ENSG00000132967.9404.47000537.45280-0.410102.845702.21680HepG2SUCLG1
HMGB1P5ENSG00000132967.9191.79860413.60150-1.108606.139505.19160HepG2SUPV3L1
HMGB1P5ENSG00000132967.991.94780297.05130-1.6918015.6907014.20020HepG2TARDBP
HMGB1P5ENSG00000132967.9162.17960277.25250-0.773603.339202.25180HepG2TFIP11
HMGB1P5ENSG00000132967.943.09830176.04330-2.0302015.8627014.84320HepG2TIAL1
HMGB1P5ENSG00000132967.9111.33380177.60660-0.673803.170902.57660HepG2TRIM56
HMGB1P5ENSG00000132967.9330.61140467.54300-0.500002.511201.68210HepG2TUFM
HMGB1P5ENSG00000132967.9322.22270494.83870-0.618903.718202.74220HepG2UBE2L3
HMGB1P5ENSG00000132967.9112.85000244.36070-1.114605.143804.10070HepG2UCHL5
HMGB1P5ENSG00000132967.9107.91830222.58410-1.044407.480006.42410HepG2UPF1
HMGB1P5ENSG00000132967.988.33390214.89490-1.282609.371608.37550HepG2UTP3
HMGB1P5ENSG00000132967.943.17470244.79870-2.5033031.2738029.94730HepG2ZNF622
HMGB1P5ENSG00000132967.9436.23830779.43700-0.837305.290004.52370K562AQR
HMGB1P5ENSG00000132967.9309.98570441.29290-0.509502.609601.68050K562BCLAF1
HMGB1P5ENSG00000132967.9370.85530578.83600-0.642302.138401.37800K562BOP1
HMGB1P5ENSG00000132967.9317.58780615.52850-0.954703.556702.66770K562CPSF6
HMGB1P5ENSG00000132967.9225.74590334.78670-0.568502.941201.85100K562CSTF2
HMGB1P5ENSG00000132967.9304.64020680.34650-1.1592013.8524012.50550K562DDX47
HMGB1P5ENSG00000132967.944.35200108.61620-1.292203.924202.29480K562DHX30
HMGB1P5ENSG00000132967.9199.00770320.04490-0.685503.547202.50590K562EFTUD2
HMGB1P5ENSG00000132967.948.9317098.69330-1.012202.276901.37400K562EIF3A
HMGB1P5ENSG00000132967.9233.47660342.75080-0.553902.374501.42400K562EIF3D
HMGB1P5ENSG00000132967.9287.79250530.68520-0.882803.323802.31470K562FTO
HMGB1P5ENSG00000132967.9357.69670244.898200.546503.285201.33030K562FUBP3
HMGB1P5ENSG00000132967.9414.08200269.964300.617002.740502.13750K562FXR1
HMGB1P5ENSG00000132967.91008.17310649.402600.634502.636801.95030K562G3BP2
HMGB1P5ENSG00000132967.9299.50170587.72610-0.972603.653402.74590K562GPKOW
HMGB1P5ENSG00000132967.9469.49370674.60380-0.522902.412401.47300K562IGF2BP2
HMGB1P5ENSG00000132967.9460.98010686.35090-0.574202.885601.66430K562IGF2BP3
HMGB1P5ENSG00000132967.9260.12940501.71940-0.947703.714502.61510K562KRR1
HMGB1P5ENSG00000132967.9147.75200573.66600-1.957008.817207.18640K562METAP2
HMGB1P5ENSG00000132967.9301.33460539.28100-0.839703.031702.25370K562NSUN2
HMGB1P5ENSG00000132967.9409.71920311.438500.395601.972801.33310K562PRPF8
HMGB1P5ENSG00000132967.9863.379501147.59930-0.410604.828803.54710K562PUM2
HMGB1P5ENSG00000132967.9693.20690402.411400.784502.894702.34150K562PUS1
HMGB1P5ENSG00000132967.9173.26510401.37060-1.212003.348002.23800K562RPS3
HMGB1P5ENSG00000132967.9306.32860558.77410-0.867202.659301.70480K562SF3B1
HMGB1P5ENSG00000132967.9758.67950960.76670-0.340703.040401.46160K562SUCLG1
HMGB1P5ENSG00000132967.9391.97710268.236200.547203.655702.71260K562SYNCRIP
HMGB1P5ENSG00000132967.91117.56820637.574000.809602.900101.39010K562TAF15
HMGB1P5ENSG00000132967.9315.22420683.89320-1.117407.916306.64200K562TARDBP
HMGB1P5ENSG00000132967.9258.69100489.27400-0.919403.552002.56150K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HMGB1P5 is not available on ENCORE database.






No RBPs affect the alternative splcing events of HMGB1P5 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HMGB1P5 is not avaliable on ENCORE database.