APIP

General Information

Gene Name       : APIP
Gene ID             : ENSG00000149089.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: APIP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878APIPENSG00000149089.1240.3036.0038.15ENCSR000AEF
HepG2APIPENSG00000149089.1215.5528.5322.04ENCSR985KAT
K562APIPENSG00000149089.1247.6951.5649.62ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for APIP is not avaliable on ENCORE database.



Proteins bound to RNA
  • APIP RNA is bound by 7 proteins.  







eCLIP assay for APIP is not avaliable on ENCORE database.





7 proteins are bound to APIP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr113493777334937916-5'-UTR,CDS,intron-Distal,intron-Proximal4.6213925.16118K562DDX3X
chr113490990034909976-CDS,intron-Distal,intron-Proximal5.6219414.34148K562YBX3
chr113491032234910420-CDS,intron-Distal,intron-Proximal3.103134.07771K562ZNF622
chr113491033534910400-CDS,intron-Distal3.039193.14203K562LIN28B
chr113493055634930639-intron-Distal4.439265.51760K562MATR3
chr113493054334930619-intron-Distal3.600603.76275K562PTBP1
chr113492284734922902-intron-Distal5.134226.29945HepG2XPO5
chr113493100834931063-intron-Distal3.956073.45817K562MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for APIP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for APIP is not available on ENCORE database.

  • 82 RBPs can affect the levels of APIP.  








The Knockdown/knockout RNA-Seq assay for APIP is not available on ENCORE database.





82 RBPs can affect the gene expression of APIP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
APIPENSG00000149089.8382.00310553.80790-0.535802.876202.33430HepG2AKAP1
APIPENSG00000149089.8168.97380269.98260-0.676103.115902.01290HepG2AKAP8
APIPENSG00000149089.8335.20660561.09090-0.743209.037007.91470HepG2AUH
APIPENSG00000149089.8127.01680256.58090-1.014405.839004.58540HepG2BCLAF1
APIPENSG00000149089.8298.33150491.81240-0.721205.775504.95000HepG2BOP1
APIPENSG00000149089.8395.33200268.700300.557002.253501.56820HepG2CNOT7
APIPENSG00000149089.8331.91210451.50610-0.443902.404401.75700HepG2CPSF6
APIPENSG00000149089.8234.82040334.19860-0.509102.617401.54280HepG2CPSF7
APIPENSG00000149089.8198.35340457.27540-1.2050016.1554014.85400HepG2CELF1
APIPENSG00000149089.8297.23920455.68320-0.616403.562302.86960HepG2DDX6
APIPENSG00000149089.8293.46560438.11000-0.578103.322402.67710HepG2EIF2S1
APIPENSG00000149089.8223.08650409.75900-0.877205.630804.57140HepG2FIP1L1
APIPENSG00000149089.8112.20910488.45080-2.1220029.9234027.95430HepG2FXR1
APIPENSG00000149089.8224.20860453.14880-1.015108.623407.48470HepG2G3BP1
APIPENSG00000149089.8384.62530284.205800.436402.102101.48780HepG2HNRNPC
APIPENSG00000149089.8249.07270327.04510-0.392902.207901.56190HepG2HNRNPF
APIPENSG00000149089.8349.95120458.76310-0.390601.916001.32880HepG2HNRNPK
APIPENSG00000149089.8360.65600488.42620-0.437502.314301.73290HepG2HNRNPLL
APIPENSG00000149089.8242.42870322.04560-0.409702.063501.43220HepG2IGF2BP1
APIPENSG00000149089.8318.31290570.32030-0.841303.325102.41420HepG2LARP4
APIPENSG00000149089.8233.95280491.36780-1.070608.962907.88050HepG2MATR3
APIPENSG00000149089.8245.33330331.64730-0.434902.015801.32020HepG2MSI2
APIPENSG00000149089.8325.94690502.95210-0.625803.925803.17490HepG2NCBP2
APIPENSG00000149089.8327.50400447.95670-0.451802.342901.67430HepG2PABPC4
APIPENSG00000149089.8327.54330456.70150-0.479603.429002.83380HepG2PTBP1
APIPENSG00000149089.8366.16830493.70250-0.431102.864202.18240HepG2PUM2
APIPENSG00000149089.8139.44500485.06720-1.798505.419502.81030HepG2RBM17
APIPENSG00000149089.8394.63820538.47470-0.448303.535702.96980HepG2RBM22
APIPENSG00000149089.8250.08000352.31510-0.494502.640301.97030HepG2RPLP0
APIPENSG00000149089.8127.37080223.61330-0.812004.278203.52930HepG2RPS19
APIPENSG00000149089.8347.04120251.430100.464803.045202.37550HepG2SAFB2
APIPENSG00000149089.8211.92750475.48640-1.1658015.3868014.16300HepG2SF3B4
APIPENSG00000149089.8130.21640293.21850-1.1711011.8877010.69930HepG2SMN1
APIPENSG00000149089.8369.50060608.16590-0.718909.141408.37580HepG2SRFBP1
APIPENSG00000149089.8301.91140459.52940-0.606005.399604.56690HepG2SRSF5
APIPENSG00000149089.8297.24720403.76970-0.441903.177302.59440HepG2SRSF9
APIPENSG00000149089.8415.81790527.99460-0.344602.648302.14270HepG2SSB
APIPENSG00000149089.8126.83140234.68640-0.887804.839403.34640HepG2STIP1
APIPENSG00000149089.8410.42430522.61710-0.348602.605201.99780HepG2SUCLG1
APIPENSG00000149089.8242.29800446.09640-0.880609.459708.52280HepG2TAF15
APIPENSG00000149089.8286.84010476.09670-0.731005.644604.66430HepG2TARDBP
APIPENSG00000149089.8119.57920193.71820-0.696002.866201.85350HepG2TFIP11
APIPENSG00000149089.8130.34680276.78420-1.0864010.179609.20270HepG2TRIM56
APIPENSG00000149089.8268.04610481.27440-0.844405.408404.21950HepG2UBE2L3
APIPENSG00000149089.884.98530170.73150-1.006404.939003.91910HepG2UCHL5
APIPENSG00000149089.8128.92910330.88720-1.3598017.2731016.19810HepG2ZNF622
APIPENSG00000149089.8396.45090265.532800.578202.897301.56730HepG2ZRANB2
APIPENSG00000149089.81252.529601828.97970-0.546205.705204.91540K562AQR
APIPENSG00000149089.81819.011501546.161900.234402.233401.42170K562ATP5C1
APIPENSG00000149089.8712.08200875.18490-0.297502.740101.78330K562BCLAF1
APIPENSG00000149089.8643.85560965.68570-0.584803.271102.32090K562BOP1
APIPENSG00000149089.8697.29540967.26270-0.472103.379901.77310K562BUD13
APIPENSG00000149089.8301.20130403.06020-0.420302.320201.37170K562CCAR1
APIPENSG00000149089.8778.301501214.28650-0.641703.701201.98940K562CKAP4
APIPENSG00000149089.8942.198801610.38010-0.773305.150303.64880K562CNOT7
APIPENSG00000149089.8662.870201026.85490-0.631403.018302.19980K562CPSF6
APIPENSG00000149089.81672.174602467.79350-0.561508.891707.18740K562CELF1
APIPENSG00000149089.82168.693701585.685800.451607.485505.91920K562DKC1
APIPENSG00000149089.8740.00770932.87300-0.334102.375801.61350K562EIF4A3
APIPENSG00000149089.81672.467102007.22580-0.263202.517401.61790K562EIF4G2
APIPENSG00000149089.8738.484701044.69610-0.500403.020302.12500K562FMR1
APIPENSG00000149089.8519.32790970.14610-0.9016016.8117015.43150K562FXR1
APIPENSG00000149089.8791.457801006.04870-0.346103.204801.97520K562GLRX3
APIPENSG00000149089.8664.09270980.43690-0.562003.863502.93290K562GPKOW
APIPENSG00000149089.8557.67500892.70060-0.678807.548406.60900K562HNRNPC
APIPENSG00000149089.8579.10190797.07840-0.460903.697302.35790K562HNRNPF
APIPENSG00000149089.81073.21970821.023500.386302.433001.56300K562HNRNPM
APIPENSG00000149089.81789.839501353.376400.403203.525202.63000K562HSPD1
APIPENSG00000149089.8581.83730837.05770-0.524703.133702.13260K562KRR1
APIPENSG00000149089.8661.42280905.17970-0.452603.153701.57150K562LIN28B
APIPENSG00000149089.8644.400701201.42030-0.8987015.4701013.19890K562MATR3
APIPENSG00000149089.81582.335502139.54210-0.435203.969002.61850K562MSI2
APIPENSG00000149089.8681.389501057.73500-0.6344010.760109.27680K562MTPAP
APIPENSG00000149089.81604.151801227.960600.385402.266101.48720K562NAA15
APIPENSG00000149089.8757.206901175.20480-0.6342013.4216011.95160K562NSUN2
APIPENSG00000149089.8989.548401440.29890-0.541502.163701.30980K562PABPN1
APIPENSG00000149089.8462.31080774.27920-0.744006.727405.42890K562PCBP3
APIPENSG00000149089.8352.55310593.92650-0.752408.000106.65990K562POLR2G
APIPENSG00000149089.8942.45760706.797100.415002.902202.13540K562PRPF8
APIPENSG00000149089.8594.73790800.37060-0.428402.825301.90990K562PSIP1
APIPENSG00000149089.81832.701902282.43760-0.316603.601902.50800K562PUM2
APIPENSG00000149089.8816.411601121.66880-0.458304.131803.08200K562RBM22
APIPENSG00000149089.8953.055401466.86820-0.622103.420801.68740K562SBDS
APIPENSG00000149089.8854.151501159.67740-0.441205.413604.30160K562SF3A3
APIPENSG00000149089.8705.130601035.22450-0.554002.605401.77840K562SF3B4
APIPENSG00000149089.81006.539601606.18690-0.674202.905801.55570K562SFPQ
APIPENSG00000149089.8963.978701506.84460-0.644504.443802.18570K562SMN1
APIPENSG00000149089.8450.18400692.12460-0.620505.326103.76570K562SRFBP1
APIPENSG00000149089.8919.041301188.11910-0.370503.596002.54530K562SRPK2
APIPENSG00000149089.8849.055701146.49090-0.433304.211503.34720K562SRSF1
APIPENSG00000149089.8537.34410691.91110-0.364702.362301.40140K562SRSF4
APIPENSG00000149089.8700.234501435.61320-1.035806.293703.87860K562STIP1
APIPENSG00000149089.81486.923301910.87070-0.361903.708201.97260K562SUCLG1
APIPENSG00000149089.8482.04360684.27500-0.505403.260002.15190K562SUPV3L1
APIPENSG00000149089.8804.891201160.42190-0.527804.920203.96240K562TARDBP
APIPENSG00000149089.8514.89050769.83960-0.580303.840202.73100K562TIAL1
APIPENSG00000149089.8489.91410817.69890-0.739007.865506.07950K562TRIM56
APIPENSG00000149089.8559.52700724.24950-0.372302.234701.32790K562UCHL5
APIPENSG00000149089.81009.853701246.09730-0.303303.190602.42190K562UPF1
APIPENSG00000149089.8866.472801066.24170-0.299302.244701.45770K562WDR3
APIPENSG00000149089.8925.953901108.79760-0.260002.623101.79810K562WDR43
APIPENSG00000149089.81410.455502060.45450-0.546806.987505.51470K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for APIP is not available on ENCORE database.





2 RBPs can affect the splicing of APIP :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAPIPENSG00000149089.8chr11-349165563491665734912050349120993493777434938046-0.053000.000080.00192excludedK562PUS1
SEAPIPENSG00000149089.8chr11-349335193493366034916556349166573493777434938046-0.087000.000950.02945excludedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for APIP is not avaliable on ENCORE database.