RNF167

General Information

Gene Name : RNF167
Gene ID : ENSG00000108523.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RNF167)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RNF167	ENSG00000108523.15	83.52	99.73	91.62	ENCSR000AEF
HepG2	RNF167	ENSG00000108523.15	53.60	64.59	59.09	ENCSR985KAT
K562	RNF167	ENSG00000108523.15	86.53	96.37	91.45	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RNF167 is not avaliable on ENCORE database.

Proteins bound to RNA

RNF167 RNA is bound by 13 proteins.

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eCLIP assay for RNF167 is not avaliable on ENCORE database.

13 proteins are bound to RNF167 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	4848217	4848359	+	3'-UTR,CDS	5.01199	36.07469	HepG2	PCBP2
chr17	4844210	4844289	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.42818	19.61701	HepG2	DDX3X
chr17	4847894	4847982	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.34391	10.85246	HepG2	PRPF8
chr17	4848208	4848379	+	3'-UTR,CDS	3.82525	10.11126	HepG2	LARP4
chr17	4848359	4848447	+	3'-UTR	4.46044	8.47057	HepG2	PCBP2
chr17	4844043	4844134	+	5'-UTR,intron-Distal,intron-Proximal	4.29568	7.41870	HepG2	DDX3X
chr17	4848250	4848293	+	3'-UTR,CDS	4.17292	7.37833	K562	PABPC4
chr17	4848363	4848428	+	3'-UTR	4.28234	7.26403	K562	IGF2BP2
chr17	4846554	4846615	+	CDS,intron-Distal,intron-Proximal	3.89408	5.43815	HepG2	PRPF8
chr17	4847862	4847928	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.79356	5.24452	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 16 entries

eCLIP assay for RNF167 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RNF167 is not available on ENCORE database.
69 RBPs can affect the levels of RNF167.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RNF167 is not available on ENCORE database.

69 RBPs can affect the gene expression of RNF167 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RNF167	ENSG00000108523.11	700.66610	1259.31430	-0.84580	19.07900	17.36770	HepG2	PRPF4
RNF167	ENSG00000108523.11	551.07330	1121.43960	-1.02500	16.93280	14.78660	HepG2	SUPT6H
RNF167	ENSG00000108523.11	881.88100	1382.15650	-0.64830	13.53100	12.64550	HepG2	SRFBP1
RNF167	ENSG00000108523.11	846.00270	1373.77430	-0.69940	13.34930	11.78640	HepG2	EIF4G1
RNF167	ENSG00000108523.11	2016.27920	1241.87990	0.69910	10.15450	9.10240	HepG2	BOP1
RNF167	ENSG00000108523.11	805.28030	1205.11330	-0.58160	9.69950	8.67440	HepG2	PCBP1
RNF167	ENSG00000108523.11	782.66590	1197.84570	-0.61400	9.37390	8.43990	HepG2	TAF15
RNF167	ENSG00000108523.11	2043.78750	1464.10000	0.48110	8.62230	7.66160	HepG2	ETF1
RNF167	ENSG00000108523.11	1760.46670	1217.23090	0.53230	8.26150	7.26510	K562	RBM15
RNF167	ENSG00000108523.11	951.05100	1364.70620	-0.52100	7.95630	7.12290	HepG2	NELFE
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 74 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RNF167 is not available on ENCORE database.

21 RBPs can affect the splicing of RNF167 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RNF167	ENSG00000108523.11	chr17	+	4846145	4846236			4845871	4845959	4847852	4847896	-0.20200	0.00000	0.00032	excluded	HepG2	PCBP1
RI	RNF167	ENSG00000108523.11	chr17	+	4843781	4844288			4843781	4844021	4844167	4844288	-0.10300	0.00001	0.00505	excluded	HepG2	SRSF7
MXE	RNF167	ENSG00000108523.11	chr17	+	4846145	4846236	4847852	4847933	4845871	4845959	4848009	4848517	-0.15000	0.00002	0.00914	2included	K562	NPM1
MXE	RNF167	ENSG00000108523.11	chr17	+	4846145	4846236	4847852	4847933	4845871	4845959	4848009	4848517	-0.16100	0.00004	0.00316	2included	K562	PPIL4
RI	RNF167	ENSG00000108523.11	chr17	+	4843781	4844288			4843781	4844021	4844217	4844288	-0.22900	0.00006	0.00505	excluded	K562	SUPV3L1
RI	RNF167	ENSG00000108523.11	chr17	+	4847855	4848095			4847855	4847933	4848009	4848095	0.07200	0.00018	0.00527	included	HepG2	SRSF9
MXE	RNF167	ENSG00000108523.11	chr17	+	4846145	4846236	4847855	4847933	4845871	4845959	4848009	4848517	-0.16200	0.00025	0.01794	2included	HepG2	BCCIP
MXE	RNF167	ENSG00000108523.11	chr17	+	4846145	4846236	4847852	4847933	4845871	4845959	4848009	4848517	-0.13900	0.00039	0.02448	2included	HepG2	BCCIP
SE	RNF167	ENSG00000108523.11	chr17	+	4846145	4846236			4845871	4845959	4847852	4847896	-0.13900	0.00041	0.04264	excluded	HepG2	SRSF7
RI	RNF167	ENSG00000108523.11	chr17	+	4843781	4844288			4843781	4844021	4844167	4844288	0.06700	0.00087	0.04819	included	HepG2	HNRNPA1

Showing 1 to 10 of 26 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RNF167

General Information

Functions

Localization

Domains (AlphaFold: RNF167)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RNF167 is not avaliable on ENCORE database.

13 proteins are bound to RNF167 RNA:

eCLIP assay for RNF167 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RNF167 is not available on ENCORE database.

69 RBPs can affect the gene expression of RNF167 :

The Knockdown/knockout RNA-Seq assay for RNF167 is not available on ENCORE database.

21 RBPs can affect the splicing of RNF167 :

The Knockdown/knockout RNA-Seq assay for RNF167 is not avaliable on ENCORE database.