EMC6

General Information

Gene Name       : EMC6
Gene ID             : ENSG00000127774.6
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: EMC6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878EMC6ENSG00000127774.66.9918.7612.88ENCSR000AEF
HepG2EMC6ENSG00000127774.635.5830.0632.82ENCSR985KAT
K562EMC6ENSG00000127774.620.6716.7218.70ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for EMC6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • EMC6 RNA is bound by 6 proteins.  







eCLIP assay for EMC6 is not avaliable on ENCORE database.





6 proteins are bound to EMC6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1735728553572893+3'-UTR3.429715.27408HepG2LARP4
chr1735727713572831+3'-UTR5.3092610.26089HepG2LARP4
chr1735729053572948+3'-UTR4.324773.47885K562LIN28B
chr1735721703572229+5'-UTR,intron-Proximal3.259715.31044HepG2PRPF8
chr1735724123572511+5'-UTR,CDS4.7516611.79106HepG2DDX3X
chr1735723933572455+5'-UTR,CDS4.399074.75480HepG2RPS3
chr1735726023572646+CDS3.378083.68829K562YBX3
chr1735725323572566+CDS3.981723.53770HepG2DDX3X
chr1735724783572520+CDS3.235623.76354K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for EMC6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for EMC6 is not available on ENCORE database.

  • 51 RBPs can affect the levels of EMC6.  








The Knockdown/knockout RNA-Seq assay for EMC6 is not available on ENCORE database.





51 RBPs can affect the gene expression of EMC6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
EMC6ENSG00000127774.6646.56480466.164000.471902.897002.28580HepG2BOP1
EMC6ENSG00000127774.6281.60760400.39090-0.507703.110601.93990HepG2CPSF7
EMC6ENSG00000127774.6251.45340324.24730-0.366801.910601.35740HepG2CELF1
EMC6ENSG00000127774.6228.80210485.96560-1.086806.002704.58570HepG2DDX59
EMC6ENSG00000127774.6184.95830280.33080-0.599903.395702.46910HepG2EWSR1
EMC6ENSG00000127774.6239.49330391.32100-0.708405.049303.99960HepG2FUBP3
EMC6ENSG00000127774.6196.67420133.265000.561402.010301.44940HepG2HNRNPA1
EMC6ENSG00000127774.6215.32390150.412800.517502.568601.85990HepG2ILF2
EMC6ENSG00000127774.6819.02200603.032500.441602.458401.67770HepG2LARP4
EMC6ENSG00000127774.6218.07170131.336900.731404.254503.36120HepG2PPIL4
EMC6ENSG00000127774.6186.37630272.83950-0.549802.798202.24800HepG2PTBP1
EMC6ENSG00000127774.6213.93700292.17840-0.449702.581801.98130HepG2PUS1
EMC6ENSG00000127774.671.77800185.06200-1.366405.593004.61170HepG2RAVER1
EMC6ENSG00000127774.6399.34620131.106901.606805.283802.69940HepG2RBM17
EMC6ENSG00000127774.6212.33810303.63680-0.516002.746702.20670HepG2NELFE
EMC6ENSG00000127774.6573.02320430.760200.411602.802602.11570HepG2RPLP0
EMC6ENSG00000127774.6250.17460164.361400.606002.911802.28410HepG2RPS19
EMC6ENSG00000127774.6294.27200131.134701.166006.920005.96880HepG2SAFB2
EMC6ENSG00000127774.6245.59280164.928200.574302.363901.49180HepG2SERBP1
EMC6ENSG00000127774.6657.00160461.374200.509902.968402.26920HepG2SF3A3
EMC6ENSG00000127774.6320.77180152.926401.0686010.923609.78000HepG2SMN1
EMC6ENSG00000127774.6468.48190113.264202.048209.812307.06010HepG2SNRNP200
EMC6ENSG00000127774.6228.49550325.84680-0.512003.266202.59590HepG2SRSF5
EMC6ENSG00000127774.6155.63260241.21450-0.632203.692703.07540HepG2SRSF9
EMC6ENSG00000127774.6131.23040266.51320-1.022107.862306.99540HepG2TAF15
EMC6ENSG00000127774.6306.86540143.086901.100609.738308.90090HepG2TIAL1
EMC6ENSG00000127774.6260.64790144.361200.852306.449205.65300HepG2TRIM56
EMC6ENSG00000127774.6375.27500131.580501.511903.034901.99940HepG2U2AF2
EMC6ENSG00000127774.6536.34910395.035600.441103.670502.99700HepG2UTP3
EMC6ENSG00000127774.6567.70710450.006600.335102.756002.20980HepG2ZNF622
EMC6ENSG00000127774.6264.27560188.714600.485702.299801.77460K562AGGF1
EMC6ENSG00000127774.6198.08000280.10180-0.499902.415401.67800K562CPSF6
EMC6ENSG00000127774.6613.29110393.165900.641307.429906.43230K562DDX47
EMC6ENSG00000127774.6182.72730114.510200.674102.884601.52600K562DHX30
EMC6ENSG00000127774.6238.38390109.658501.120208.348307.36720K562FXR1
EMC6ENSG00000127774.6524.31370371.180800.498202.411301.70330K562GRSF1
EMC6ENSG00000127774.6144.74530228.33080-0.657602.472801.59410K562KRR1
EMC6ENSG00000127774.6149.07530101.586300.553202.064301.33340K562MAGOH
EMC6ENSG00000127774.6243.79000360.41560-0.564004.420203.50190K562NSUN2
EMC6ENSG00000127774.6248.06800146.427200.760502.322601.43110K562PABPN1
EMC6ENSG00000127774.6164.7924099.617100.726102.433201.72860K562PRPF8
EMC6ENSG00000127774.6188.6781098.696800.934805.480304.57270K562PTBP1
EMC6ENSG00000127774.6525.53730305.001300.784906.497205.24680K562PUF60
EMC6ENSG00000127774.6439.41430317.861400.467102.786001.82420K562PUM2
EMC6ENSG00000127774.6210.38460109.127100.946904.392701.94160K562RBFOX2
EMC6ENSG00000127774.6170.67810101.442800.750502.585401.79710K562RPS19
EMC6ENSG00000127774.6280.00360163.225300.778502.560901.32860K562SFPQ
EMC6ENSG00000127774.6195.0301096.754801.011205.592504.59320K562SRSF1
EMC6ENSG00000127774.6142.1342077.756000.870102.390901.42240K562SRSF4
EMC6ENSG00000127774.6222.43850354.19510-0.671102.916001.62860K562STAU1
EMC6ENSG00000127774.6209.73400345.36030-0.719502.892601.46770K562TRIP6
EMC6ENSG00000127774.6297.53250382.15420-0.361102.077401.44880K562UPF1
EMC6ENSG00000127774.6205.37620327.00070-0.671004.608003.46270K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for EMC6 is not available on ENCORE database.






No RBPs affect the alternative splcing events of EMC6 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for EMC6 is not avaliable on ENCORE database.