SYP

General Information

Gene Name       : SYP
Gene ID             : ENSG00000102003.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SYP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SYPENSG00000102003.100.540.460.50ENCSR000AEF
HepG2SYPENSG00000102003.100.930.530.73ENCSR985KAT
K562SYPENSG00000102003.102.071.611.84ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SYP is not avaliable on ENCORE database.



Proteins bound to RNA
  • SYP RNA is bound by 1 proteins.  







eCLIP assay for SYP is not avaliable on ENCORE database.





1 proteins are bound to SYP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX4904435249044445-3'-UTR,intron-Distal4.510184.90799K562UPF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SYP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SYP is not available on ENCORE database.

  • 142 RBPs can affect the levels of SYP.  








The Knockdown/knockout RNA-Seq assay for SYP is not available on ENCORE database.





142 RBPs can affect the gene expression of SYP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SYPENSG00000102003.6106.99420232.02380-1.116705.587304.29790HepG2ABCF1
SYPENSG00000102003.645.99420238.96690-2.3773028.3567026.89050HepG2ACO1
SYPENSG00000102003.6131.46120483.02370-1.8775021.2890019.95920HepG2AKAP1
SYPENSG00000102003.6343.35390560.43560-0.706903.783702.57000HepG2AKAP8
SYPENSG00000102003.666.40780240.09590-1.8542019.6351017.85950HepG2AKAP8L
SYPENSG00000102003.696.19540237.38700-1.303205.431702.97770HepG2APOBEC3C
SYPENSG00000102003.692.86920399.65960-2.1055025.7005023.65790HepG2ASCC1
SYPENSG00000102003.6436.29230205.668001.0849013.6325012.31310HepG2AUH
SYPENSG00000102003.6329.2765040.480903.0239020.5283018.43560HepG2BCLAF1
SYPENSG00000102003.6105.8170059.409600.832702.457001.88940HepG2BOP1
SYPENSG00000102003.6550.1907075.565002.8640042.0546038.73820HepG2CCAR1
SYPENSG00000102003.632.75120379.70480-3.5353048.8823046.34370HepG2CIRBP
SYPENSG00000102003.6517.50760238.922501.1149017.9321016.56120HepG2CKAP4
SYPENSG00000102003.636.03340254.18840-2.8185023.7854021.61430HepG2CNOT7
SYPENSG00000102003.6321.3463073.464902.1289020.1499016.26330HepG2CSTF2T
SYPENSG00000102003.623.1444093.80420-2.019005.683504.82500HepG2CELF1
SYPENSG00000102003.6149.96750100.812800.572902.694801.96130HepG2DAZAP1
SYPENSG00000102003.669.51730221.01360-1.6687017.3780015.70480HepG2DDX19B
SYPENSG00000102003.617.6257044.92910-1.350002.421901.34050HepG2DDX1
SYPENSG00000102003.6141.1922079.103800.835703.164902.44290HepG2DDX21
SYPENSG00000102003.6298.9027034.685803.1072032.5483029.09540HepG2DDX28
SYPENSG00000102003.6924.96240288.764901.6794034.6940031.08510HepG2DDX47
SYPENSG00000102003.6241.6296045.837702.3981015.7114014.07480HepG2DDX55
SYPENSG00000102003.6465.3857061.933502.9095031.0816028.28440HepG2DDX59
SYPENSG00000102003.6389.20280149.100901.384107.026705.47880HepG2DDX5
SYPENSG00000102003.6524.92760397.475300.401201.956801.42950HepG2DDX6
SYPENSG00000102003.654.90990228.62850-2.0579019.9664018.53590HepG2DKC1
SYPENSG00000102003.6140.5327044.054301.6735010.179008.89900HepG2DNAJC21
SYPENSG00000102003.681.2517043.671200.895602.788002.13380HepG2DNAJC2
SYPENSG00000102003.615.0700071.71240-2.250506.874205.48970HepG2EEF2
SYPENSG00000102003.6248.9495072.871601.7723013.5507011.32380HepG2AGO1
SYPENSG00000102003.6657.12570382.092800.782106.805805.90350HepG2EIF2S1
SYPENSG00000102003.668.50800175.95450-1.360908.560706.65310HepG2EIF2S2
SYPENSG00000102003.618.9362058.21670-1.620303.972902.89950HepG2EIF3D
SYPENSG00000102003.6140.6747074.723300.912603.810302.56740HepG2EIF3G
SYPENSG00000102003.6405.16390637.51460-0.654003.402201.44280HepG2EIF3H
SYPENSG00000102003.624.63410411.13140-4.0609050.1207047.51160HepG2EIF4B
SYPENSG00000102003.61099.8336095.307803.52840115.80590111.72480HepG2EIF4G2
SYPENSG00000102003.643.45000236.14750-2.4423026.0254024.50030HepG2ETF1
SYPENSG00000102003.6269.3931070.790301.9280017.9452014.62500HepG2EXOSC9
SYPENSG00000102003.61294.8373075.400904.10190155.25370151.36820HepG2FASTKD2
SYPENSG00000102003.635.83520234.27300-2.7087023.0888021.26410HepG2FIP1L1
SYPENSG00000102003.660.75550269.49360-2.1492023.0076020.83900HepG2FUBP3
SYPENSG00000102003.6128.35090426.04970-1.7309020.0251018.34320HepG2FXR1
SYPENSG00000102003.6109.60600395.21600-1.8503021.1203019.35750HepG2G3BP1
SYPENSG00000102003.6176.82340419.58240-1.2466011.813009.98380HepG2G3BP2
SYPENSG00000102003.627.3677080.26720-1.552302.426901.47780HepG2GNB2L1
SYPENSG00000102003.6147.22840235.31290-0.676502.714401.61310HepG2GRSF1
SYPENSG00000102003.6316.10400228.149500.470303.025702.00800HepG2HDGF
SYPENSG00000102003.679.00680209.93320-1.409908.878106.25380HepG2HNRNPAB
SYPENSG00000102003.6399.6089049.473703.0138042.5808040.26000HepG2HNRNPC
SYPENSG00000102003.6253.1338058.673602.1090024.5477022.70990HepG2HNRNPF
SYPENSG00000102003.680.80660400.20970-2.3082029.6364027.61360HepG2HNRNPK
SYPENSG00000102003.6149.5969091.817700.704103.422602.68080HepG2HNRNPL
SYPENSG00000102003.628.1213058.99340-1.068902.096601.54040HepG2HNRNPLL
SYPENSG00000102003.629.05970161.59570-2.4753018.3248016.24640HepG2HNRNPM
SYPENSG00000102003.6360.43310609.98410-0.759003.248201.91190HepG2HSPD1
SYPENSG00000102003.6227.9235057.776401.9799018.8009017.10090HepG2IGF2BP1
SYPENSG00000102003.6183.86760401.72570-1.127509.665608.48950HepG2IGF2BP2
SYPENSG00000102003.617.37350377.01310-4.4397030.0796027.24570HepG2IGF2BP3
SYPENSG00000102003.696.3800050.201200.940903.454702.64230HepG2ILF2
SYPENSG00000102003.6133.05120404.07250-1.6026014.6040012.18950HepG2KHSRP
SYPENSG00000102003.6160.3737071.060501.174206.911904.41440HepG2CCAR2
SYPENSG00000102003.696.07230218.45040-1.185109.664107.86370HepG2KIF1C
SYPENSG00000102003.61265.97680609.617601.0542011.166408.76630HepG2KRR1
SYPENSG00000102003.631.0371079.69030-1.360402.557701.76040HepG2LARP4
SYPENSG00000102003.6320.02180426.19850-0.413401.933801.38000HepG2MAGOH
SYPENSG00000102003.6173.80080438.67520-1.3357012.7502011.44690HepG2NCBP2
SYPENSG00000102003.6264.45110578.11130-1.128304.582502.74940HepG2NKRF
SYPENSG00000102003.658.8177099.96850-0.765202.060101.39970HepG2NOL12
SYPENSG00000102003.6100.3409042.142601.251502.660901.59000HepG2NONO
SYPENSG00000102003.6465.28120232.342401.001806.017704.67180HepG2PABPC1
SYPENSG00000102003.6129.48890390.66010-1.5931016.6940014.97220HepG2PABPC4
SYPENSG00000102003.6161.50550429.14460-1.4099020.4200019.01900HepG2PCBP1
SYPENSG00000102003.6720.2376075.499403.2538063.0014058.63730HepG2PHF6
SYPENSG00000102003.649.19370128.17980-1.381602.151101.46140HepG2PRPF4
SYPENSG00000102003.6768.6106089.337803.1048051.0151047.24550HepG2PRPF6
SYPENSG00000102003.696.7746035.304901.454703.932402.98970HepG2PRPF8
SYPENSG00000102003.6292.92750436.68110-0.576004.403103.74770HepG2PTBP1
SYPENSG00000102003.6200.6731095.442401.072006.860905.97850HepG2PUF60
SYPENSG00000102003.659.80030101.24840-0.759701.909201.34600HepG2PUM2
SYPENSG00000102003.6122.17390243.40430-0.994407.961707.00710HepG2PUS1
SYPENSG00000102003.67.9809082.02850-3.3615010.602509.28880HepG2RAVER1
SYPENSG00000102003.6657.88760259.654401.3411022.5272020.49690HepG2RBM15
SYPENSG00000102003.6317.94480128.760701.304003.735201.60250HepG2RBM17
SYPENSG00000102003.6228.09790429.20850-0.912008.397907.27270HepG2RBM25
SYPENSG00000102003.6266.88080113.074601.238803.450201.60900HepG2RBM39
SYPENSG00000102003.666.95830485.97550-2.8595057.5503055.84130HepG2NELFE
SYPENSG00000102003.690.34130452.63580-2.3249042.0410040.21290HepG2RECQL
SYPENSG00000102003.6144.8745063.211701.196405.440504.52820HepG2RPLP0
SYPENSG00000102003.619.5117056.64550-1.537603.705503.00410HepG2RPS19
SYPENSG00000102003.616.9860089.19620-2.392604.124302.79950HepG2RPS5
SYPENSG00000102003.67.5162034.91850-2.215903.084702.26130HepG2RRP9
SYPENSG00000102003.6130.0714043.766001.571308.933207.87730HepG2SAFB2
SYPENSG00000102003.662.80710307.87600-2.2933016.3674014.65580HepG2SF3A3
SYPENSG00000102003.6159.8376058.387701.452807.706606.58050HepG2SF3B1
SYPENSG00000102003.6138.90990454.62280-1.7105011.6375010.55560HepG2SF3B4
SYPENSG00000102003.632.04080120.71740-1.913704.642502.69820HepG2SFPQ
SYPENSG00000102003.6136.6780091.547500.578102.394701.73580HepG2SLBP
SYPENSG00000102003.6286.7286079.986501.8418010.461607.59890HepG2SLTM
SYPENSG00000102003.622.0607051.03650-1.210002.720402.08010HepG2SMN1
SYPENSG00000102003.682.08520474.53530-2.5313049.1518047.69970HepG2SRSF1
SYPENSG00000102003.6249.9496062.837101.991807.622305.88480HepG2SRSF3
SYPENSG00000102003.631.8452094.25480-1.565505.561304.71860HepG2SRSF5
SYPENSG00000102003.6360.0356057.646202.6427045.4396043.35040HepG2SRSF7
SYPENSG00000102003.6121.04090386.06630-1.6734025.0970023.74730HepG2SRSF9
SYPENSG00000102003.6122.58660193.53930-0.658803.326302.77510HepG2SSB
SYPENSG00000102003.6605.41570156.416901.9524025.7775022.87500HepG2STAU1
SYPENSG00000102003.654.81200107.17720-0.967403.148002.49330HepG2SUCLG1
SYPENSG00000102003.6298.52250158.134300.916603.303902.28130HepG2SUPT6H
SYPENSG00000102003.679.19950426.55190-2.4292042.4414040.58620HepG2TAF15
SYPENSG00000102003.6268.2931057.519202.2216021.4593019.80210HepG2TARDBP
SYPENSG00000102003.694.28250597.20300-2.6632020.6923018.21160HepG2TBRG4
SYPENSG00000102003.6757.08740391.920800.9498014.0625012.20970HepG2TIA1
SYPENSG00000102003.692.5550047.747600.954803.077202.55440HepG2TIAL1
SYPENSG00000102003.684.5791048.182400.811702.437801.90150HepG2TRIM56
SYPENSG00000102003.630.3289093.26960-1.620705.435404.16140HepG2TUFM
SYPENSG00000102003.657.40130200.36680-1.8035012.3528010.99270HepG2U2AF1
SYPENSG00000102003.6243.3920098.741701.301502.364001.59490HepG2UBE2L3
SYPENSG00000102003.661.1325026.935101.182402.446001.73230HepG2UCHL5
SYPENSG00000102003.653.37620273.04090-2.3548013.4169012.09640HepG2UPF1
SYPENSG00000102003.6131.51920280.63280-1.093405.214603.81870HepG2UTP18
SYPENSG00000102003.6826.87180263.607201.6492043.5070041.54100HepG2UTP3
SYPENSG00000102003.6481.44960228.663701.074108.775006.84270HepG2XPO5
SYPENSG00000102003.623.3440090.18450-1.949807.595705.91520HepG2XRCC6
SYPENSG00000102003.645.5966093.41040-1.034703.212102.60870K562AGGF1
SYPENSG00000102003.6242.8770097.195301.321209.940508.60160K562AKAP8L
SYPENSG00000102003.6212.33120148.370100.517002.311201.43510K562BCLAF1
SYPENSG00000102003.672.37410170.86040-1.239306.228004.90690K562BOP1
SYPENSG00000102003.6273.1897097.444201.4872013.1327010.27460K562CCAR1
SYPENSG00000102003.6264.34440111.638401.2435010.317808.04070K562CCDC124
SYPENSG00000102003.676.60790131.12940-0.775402.817201.52490K562CIRBP
SYPENSG00000102003.6527.65990284.626700.890407.318204.88230K562CKAP4
SYPENSG00000102003.6663.36810245.909601.4316012.2691010.05680K562CNOT7
SYPENSG00000102003.6223.88880392.94250-0.811506.089804.65060K562CELF1
SYPENSG00000102003.6160.2307085.789000.901204.205102.88120K562DDX3X
SYPENSG00000102003.6129.91790265.64560-1.031908.669507.59630K562DDX47
SYPENSG00000102003.6222.99550105.466701.080104.480501.75880K562AGO1
SYPENSG00000102003.6288.8617094.213001.6163016.5249013.61780K562EIF2S1
SYPENSG00000102003.6796.16310319.607501.3167027.3116024.67420K562EIF4G2
SYPENSG00000102003.6774.08380114.819302.7530064.6663060.77190K562FASTKD2
SYPENSG00000102003.6190.4670087.844101.116405.206703.57500K562FKBP4
SYPENSG00000102003.661.05230116.96920-0.938003.433001.80580K562G3BP1
SYPENSG00000102003.635.4845073.27260-1.046102.612701.92920K562G3BP2
SYPENSG00000102003.6110.45010173.44550-0.651102.495601.73820K562GPKOW
SYPENSG00000102003.666.25590166.06770-1.325704.762803.01860K562HNRNPA2B1
SYPENSG00000102003.6301.43680101.173601.5749012.4579011.26600K562HNRNPC
SYPENSG00000102003.6112.50810200.27200-0.831903.591601.44600K562HNRNPH1
SYPENSG00000102003.6422.99520240.074600.817107.278905.48650K562HNRNPL
SYPENSG00000102003.6232.36740148.279100.648002.818401.87890K562HNRNPM
SYPENSG00000102003.6113.63520174.82270-0.621502.689001.80930K562HNRNPU
SYPENSG00000102003.6124.54140244.40130-0.972605.808204.66940K562HSPD1
SYPENSG00000102003.668.30560124.41350-0.865103.484802.10840K562IGF2BP3
SYPENSG00000102003.6445.81470224.516800.989505.363803.34330K562ILF2
SYPENSG00000102003.6387.99740148.110501.389304.463703.24490K562KRR1
SYPENSG00000102003.6284.69780128.330101.1495010.055808.18930K562MATR3
SYPENSG00000102003.6589.90430169.303701.8008029.7333026.93590K562METAP2
SYPENSG00000102003.6417.83290236.247600.822504.238902.68130K562PABPC1
SYPENSG00000102003.630.5796077.43630-1.340404.241301.95190K562PABPC4
SYPENSG00000102003.669.78480145.30600-1.058103.003201.96260K562PABPN1
SYPENSG00000102003.669.22700125.66340-0.860203.419501.91410K562PCBP1
SYPENSG00000102003.6421.1185098.778402.0919030.2277026.46690K562PHF6
SYPENSG00000102003.6150.67350328.40430-1.124009.623707.27520K562PNPT1
SYPENSG00000102003.6991.90040127.155802.9635040.8746036.50340K562PRPF6
SYPENSG00000102003.6159.0366090.713300.809902.800801.88990K562PSIP1
SYPENSG00000102003.6207.30680124.922000.730603.999003.21500K562PTBP1
SYPENSG00000102003.6170.9310096.408500.826103.428702.83340K562PUS1
SYPENSG00000102003.6180.93700119.815000.594602.486601.69310K562RBM22
SYPENSG00000102003.625.4453069.48640-1.449304.035402.38250K562RBM25
SYPENSG00000102003.6229.31250106.654901.104303.287501.57150K562SERBP1
SYPENSG00000102003.6313.86890227.555900.463802.567201.78010K562SF3A3
SYPENSG00000102003.680.05600162.07040-1.017503.148301.72380K562SFPQ
SYPENSG00000102003.6438.88420233.136500.9126010.501308.81070K562SRPK2
SYPENSG00000102003.6321.64470122.459101.3931013.6488012.07850K562SRSF1
SYPENSG00000102003.6638.00990216.322701.560308.777306.48510K562STAU1
SYPENSG00000102003.657.46070182.56180-1.667706.548604.09270K562SUPT6H
SYPENSG00000102003.6185.74120119.560100.635502.678801.87500K562TIA1
SYPENSG00000102003.6168.6179087.250700.950404.137402.97300K562TIAL1
SYPENSG00000102003.6212.9905092.695501.200107.569505.82710K562TRIM56
SYPENSG00000102003.6299.01110127.725001.227108.812906.92270K562UCHL5
SYPENSG00000102003.6101.84050244.51690-1.2636010.513809.22800K562UPF1
SYPENSG00000102003.61434.35570352.520302.0245063.5244059.11440K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SYP is not available on ENCORE database.





1 RBPs can affect the splicing of SYP :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESYPENSG00000102003.6chrX-4905062249050818490497284904992049055426490554920.401000.000020.05552includedK562WRN

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SYP is not avaliable on ENCORE database.