AP000320.7

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AP000320.7 is not avaliable on ENCORE database.

Proteins bound to RNA

AP000320.7 RNA is bound by 40 proteins.

eCLIP assay for AP000320.7 is not avaliable on ENCORE database.

40 proteins are bound to AP000320.7 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr21	35478427	35478501	+	3'-UTR,intron-Distal	3.91960	14.45812	K562	KHSRP
chr21	35480366	35480419	+	intron-Distal	4.29625	4.78128	HepG2	SUGP2
chr21	35454965	35454995	+	intron-Distal	3.60784	8.27800	K562	EXOSC5
chr21	35488427	35488572	+	intron-Distal	3.30600	3.87725	K562	EIF4G2
chr21	35496050	35496101	+	intron-Distal	4.11323	3.33944	K562	MATR3
chr21	35460163	35460255	+	intron-Distal	4.68121	3.89786	K562	RBFOX2
chr21	35469634	35469686	+	3'-UTR,CDS,intron-Distal	3.78646	5.41741	K562	XRCC6
chr21	35481307	35481369	+	intron-Distal	4.10510	5.63677	K562	PTBP1
chr21	35496516	35496593	+	intron-Distal	4.43771	3.27829	HepG2	MATR3
chr21	35455757	35455824	+	intron-Distal	3.37597	6.54610	K562	HNRNPM
chr21	35455822	35455863	+	intron-Distal	6.04507	14.31968	K562	EXOSC5
chr21	35452058	35452171	+	intron-Distal	5.07107	14.97829	HepG2	QKI
chr21	35459164	35459263	+	intron-Distal	4.73836	6.19745	HepG2	HNRNPM
chr21	35460133	35460244	+	intron-Distal	3.60497	5.45871	HepG2	HNRNPM
chr21	35448017	35448068	+	intron-Distal	3.84400	3.23847	HepG2	CSTF2
chr21	35458820	35458927	+	intron-Distal	5.25123	19.86425	K562	TARDBP
chr21	35446217	35446308	+	intron-Distal	6.95404	20.06468	HepG2	EFTUD2
chr21	35446257	35446357	+	intron-Distal	3.33298	8.10407	HepG2	XRN2
chr21	35453170	35453261	+	intron-Distal	4.41958	5.40397	K562	LIN28B
chr21	35460173	35460248	+	intron-Distal	3.53997	6.07711	K562	HNRNPM
chr21	35481002	35481058	+	intron-Distal	3.28325	3.59523	HepG2	SUGP2
chr21	35475763	35475844	+	3'-UTR,intron-Distal,intron-Proximal	3.51231	8.37834	K562	U2AF2
chr21	35448961	35449040	+	intron-Distal	3.35503	4.35650	K562	KHSRP
chr21	35446246	35446312	+	intron-Distal	5.12751	7.36769	K562	FMR1
chr21	35455594	35455625	+	intron-Distal	4.17595	6.71225	K562	EXOSC5
chr21	35497080	35497173	+	intron-Distal	4.77118	6.21167	K562	CPSF6
chr21	35468505	35468578	+	CDS,intron-Distal	3.63525	3.30795	HepG2	SND1
chr21	35459466	35459530	+	intron-Distal	4.96127	14.82019	K562	EXOSC5
chr21	35469143	35469177	+	CDS,intron-Distal	3.27096	3.34231	K562	RBM15
chr21	35446783	35446846	+	intron-Distal	3.87068	7.08707	K562	NONO
chr21	35446570	35446639	+	intron-Distal	5.43145	19.26756	K562	FMR1
chr21	35470409	35470460	+	3'-UTR,intron-Distal	3.90574	5.32884	K562	KHSRP
chr21	35446217	35446425	+	intron-Distal	4.94367	16.51139	K562	XRN2
chr21	35468287	35468366	+	CDS,intron-Distal	4.88873	13.44745	K562	SND1
chr21	35475765	35475836	+	3'-UTR,intron-Distal,intron-Proximal	3.06548	4.48722	K562	U2AF1
chr21	35460111	35460157	+	intron-Distal	5.81731	12.65885	K562	EXOSC5
chr21	35460096	35460194	+	intron-Distal	3.08544	3.20028	K562	TARDBP
chr21	35452917	35452977	+	intron-Distal	3.74562	3.37809	K562	HNRNPL
chr21	35488494	35488559	+	intron-Distal	4.46303	5.30489	K562	TARDBP
chr21	35453220	35453274	+	intron-Distal	3.72030	6.25598	K562	KHSRP
chr21	35477872	35477950	+	3'-UTR,intron-Distal	3.18086	16.15700	K562	PUM2
chr21	35496307	35496398	+	intron-Distal	4.52201	3.62238	HepG2	MATR3
chr21	35460198	35460261	+	intron-Distal	4.81564	19.92739	K562	EXOSC5
chr21	35459873	35460063	+	intron-Distal	4.51300	24.90420	K562	EXOSC5
chr21	35459984	35460129	+	intron-Distal	5.28761	29.03621	K562	HNRNPM
chr21	35453846	35453936	+	intron-Distal	4.16763	11.54224	K562	EXOSC5
chr21	35478190	35478240	+	3'-UTR,intron-Distal	3.25703	10.46655	K562	KHSRP
chr21	35463319	35463495	+	intron-Distal	4.02236	9.00091	K562	HNRNPM
chr21	35459359	35459430	+	intron-Distal	4.24375	15.89531	K562	EXOSC5
chr21	35446460	35446526	+	intron-Distal	5.11806	6.64417	K562	NONO
chr21	35472365	35472425	+	3'-UTR,intron-Distal	3.02958	6.74304	K562	PUM2
chr21	35478250	35478355	+	3'-UTR,intron-Distal	5.24710	9.53542	K562	CPSF6
chr21	35468743	35468789	+	CDS,intron-Distal	3.66487	8.08434	K562	SND1
chr21	35476451	35476522	+	3'-UTR,intron-Distal	3.62863	5.63970	K562	TARDBP
chr21	35446573	35446640	+	intron-Distal	6.10498	19.43320	K562	CSTF2T
chr21	35446581	35446641	+	intron-Distal	4.70868	5.45333	HepG2	CSTF2
chr21	35470940	35471058	+	3'-UTR,intron-Distal	3.34812	5.80953	HepG2	LIN28B
chr21	35459996	35460115	+	intron-Distal	5.14671	15.51089	HepG2	HNRNPM
chr21	35453274	35453329	+	intron-Distal	3.16065	5.39758	K562	KHSRP
chr21	35478501	35478551	+	3'-UTR,intron-Distal	4.62036	20.31333	K562	KHSRP
chr21	35446139	35446217	+	intron-Distal,intron-Proximal	4.54597	7.05950	K562	XRN2
chr21	35496515	35496625	+	intron-Distal	5.34051	9.99839	K562	MATR3
chr21	35515342	35515409	+	intron-Distal	3.91456	3.77017	HepG2	CSTF2
chr21	35481470	35481498	+	intron-Distal	3.88121	3.16028	HepG2	SUGP2
chr21	35481459	35481514	+	intron-Distal	3.74330	4.32448	K562	PTBP1
chr21	35515260	35515322	+	3'-UTR,intron-Distal	4.57935	10.54280	K562	PUM2
chr21	35455764	35455818	+	intron-Distal	3.20729	6.14339	K562	EXOSC5
chr21	35446226	35446344	+	intron-Distal	4.58438	38.90118	K562	GEMIN5
chr21	35470999	35471050	+	3'-UTR,intron-Distal	4.04415	20.91403	K562	PUM2
chr21	35458532	35458579	+	intron-Distal	4.05815	9.39208	K562	EXOSC5
chr21	35459151	35459219	+	intron-Distal	3.93652	11.24252	K562	EXOSC5
chr21	35457115	35457159	+	intron-Distal	4.66329	5.05488	HepG2	QKI
chr21	35446436	35446528	+	intron-Distal	3.20332	3.34613	K562	XRN2
chr21	35455998	35456076	+	intron-Distal	5.03162	8.23608	HepG2	HNRNPM
chr21	35481294	35481356	+	intron-Distal	4.69776	6.48506	K562	MATR3
chr21	35446249	35446328	+	intron-Distal	4.08109	14.38219	K562	DROSHA
chr21	35484370	35484518	+	intron-Distal	3.53148	4.73075	K562	MATR3
chr21	35470055	35470082	+	3'-UTR,intron-Distal	4.23236	3.11728	K562	FAM120A
chr21	35468820	35468869	+	CDS,intron-Distal	5.72491	11.20067	K562	SND1
chr21	35468366	35468707	+	CDS,intron-Distal	5.12229	39.11628	K562	SND1
chr21	35446312	35446383	+	intron-Distal	3.61025	5.96427	K562	FMR1
chr21	35468529	35468585	+	CDS,intron-Distal	4.31993	4.55369	K562	LIN28B
chr21	35495655	35495740	+	intron-Distal	4.84606	7.55950	K562	MATR3
chr21	35463380	35463494	+	intron-Distal	3.77154	3.68481	HepG2	HNRNPM
chr21	35458999	35459055	+	intron-Distal	4.31535	12.15449	K562	EXOSC5
chr21	35455041	35455086	+	intron-Distal	3.78460	12.27348	K562	EXOSC5
chr21	35459164	35459246	+	intron-Distal	6.05906	12.35351	K562	HNRNPM
chr21	35446770	35446870	+	intron-Distal	4.25590	4.65731	HepG2	CSTF2
chr21	35486657	35486743	+	intron-Distal	4.35399	4.86548	HepG2	SUGP2
chr21	35446481	35446558	+	intron-Distal	4.22906	4.78334	K562	IGF2BP2
chr21	35475843	35475917	+	3'-UTR,intron-Distal,intron-Proximal	3.09543	4.55729	K562	TIA1
chr21	35476860	35476970	+	3'-UTR,intron-Distal	3.45384	3.91534	K562	HNRNPA1
chr21	35446251	35446323	+	intron-Distal	3.95314	6.34085	K562	LSM11
chr21	35497039	35497135	+	intron-Distal	3.56360	5.09606	K562	PTBP1
chr21	35455860	35455932	+	intron-Distal	4.50333	5.31505	K562	HNRNPM
chr21	35457226	35457312	+	intron-Distal	3.88036	8.75550	HepG2	QKI
chr21	35470946	35471015	+	3'-UTR,intron-Distal	3.01770	3.72827	K562	HNRNPM
chr21	35446301	35446348	+	intron-Distal	3.64904	6.87667	K562	CSTF2T
chr21	35468278	35468346	+	CDS,intron-Distal	3.41232	3.34034	HepG2	HLTF
chr21	35455904	35455923	+	intron-Distal	4.76250	5.44433	K562	EXOSC5
chr21	35446442	35446540	+	intron-Distal	4.19450	8.00728	HepG2	XRN2
chr21	35468854	35468910	+	CDS,intron-Distal	4.72709	4.35919	HepG2	SND1
chr21	35470921	35471031	+	3'-UTR,intron-Distal	4.58786	5.42395	HepG2	HNRNPM
chr21	35446449	35446558	+	intron-Distal	4.17056	26.35604	K562	GEMIN5
chr21	35481420	35481516	+	intron-Distal	4.09823	11.43966	K562	MATR3
chr21	35453044	35453123	+	intron-Distal	3.77726	10.27184	K562	KHSRP
chr21	35471997	35472085	+	3'-UTR,intron-Distal	3.04204	21.75476	K562	PUM2
chr21	35460264	35460313	+	intron-Distal	4.10200	10.92663	K562	EXOSC5
chr21	35468778	35468858	+	CDS,intron-Distal	3.33221	3.08145	HepG2	HLTF
chr21	35458828	35458934	+	intron-Distal	5.85022	40.34010	K562	EXOSC5
chr21	35456157	35456180	+	intron-Distal	5.30283	9.35180	K562	EXOSC5
chr21	35470460	35470519	+	3'-UTR,intron-Distal	3.87992	9.70788	K562	KHSRP
chr21	35487550	35487639	+	intron-Distal	3.72405	6.02877	HepG2	SUGP2
chr21	35481129	35481192	+	intron-Distal	4.50203	4.75674	K562	MATR3
chr21	35493042	35493144	+	intron-Distal	3.48432	4.52210	K562	KHSRP
chr21	35453123	35453220	+	intron-Distal	5.02949	19.72682	K562	KHSRP
chr21	35478240	35478349	+	3'-UTR,intron-Distal	3.97375	26.30329	K562	KHSRP
chr21	35480911	35480934	+	intron-Distal	3.72878	3.16028	HepG2	SUGP2
chr21	35456089	35456157	+	intron-Distal	4.31601	17.27358	K562	EXOSC5
chr21	35496309	35496393	+	intron-Distal	3.58106	7.98957	HepG2	SUGP2
chr21	35446323	35446373	+	intron-Distal	4.89217	8.08215	HepG2	EFTUD2
chr21	35463082	35463141	+	intron-Distal	3.28192	6.83682	K562	EXOSC5
chr21	35457159	35457226	+	intron-Distal	5.27757	8.20307	HepG2	QKI
chr21	35514968	35515025	+	3'-UTR,intron-Distal	4.52422	6.92152	K562	PABPC4
chr21	35455444	35455499	+	intron-Distal	3.44425	10.96469	K562	EXOSC5
chr21	35459905	35460015	+	intron-Distal	4.21842	4.27819	HepG2	EXOSC5
chr21	35496308	35496358	+	intron-Distal	4.31500	5.01208	K562	MATR3
chr21	35468904	35469018	+	CDS,intron-Distal	4.07135	15.24871	K562	SND1
chr21	35455511	35455607	+	intron-Distal	4.70602	12.90424	K562	HNRNPM
chr21	35495740	35495802	+	intron-Distal	4.10748	3.62025	K562	MATR3
chr21	35446664	35446702	+	intron-Distal	3.33138	4.34865	K562	NONO
chr21	35455456	35455511	+	intron-Distal	3.82447	6.25647	K562	HNRNPM
chr21	35491866	35491921	+	intron-Distal	3.32561	3.35044	K562	HNRNPM
chr21	35446214	35446374	+	intron-Distal	3.67417	11.49539	K562	EFTUD2
chr21	35466040	35466085	+	intron-Distal	4.32389	3.77802	HepG2	U2AF2
chr21	35446254	35446425	+	intron-Distal	3.42191	15.47675	K562	PRPF8
chr21	35480089	35480142	+	intron-Distal	3.09159	3.46325	HepG2	SUGP2
chr21	35446229	35446378	+	intron-Distal	4.13977	16.75950	HepG2	NKRF
chr21	35446306	35446445	+	intron-Distal	5.82945	15.95894	K562	NONO
chr21	35503536	35503707	+	intron-Distal	3.23836	5.13070	HepG2	HNRNPM
chr21	35455901	35455945	+	intron-Distal	3.99892	3.34098	HepG2	HNRNPM
chr21	35481142	35481218	+	intron-Distal	3.70590	7.44522	HepG2	SUGP2
chr21	35446584	35446620	+	intron-Distal	4.44668	4.58989	K562	NONO
chr21	35446226	35446314	+	intron-Distal	3.40942	8.68965	K562	DDX52
chr21	35467977	35468060	+	CDS,intron-Distal	3.24359	9.19991	K562	SND1
chr21	35512415	35512484	+	intron-Distal	4.50428	4.40618	K562	PTBP1
chr21	35455990	35456057	+	intron-Distal	3.79282	5.06094	K562	HNRNPM
chr21	35463462	35463535	+	intron-Distal	4.11821	7.31365	K562	EXOSC5
chr21	35455824	35455857	+	intron-Distal	3.84370	3.29197	K562	HNRNPM
chr21	35470567	35470640	+	3'-UTR,intron-Distal	3.38223	4.45024	K562	U2AF2
chr21	35446062	35446139	+	intron-Distal,intron-Proximal	3.73937	7.48737	K562	XRN2
chr21	35446043	35446093	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.27880	6.65588	K562	AQR
chr21	35446023	35446136	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.96540	12.86254	HepG2	EFTUD2
chr21	35445886	35446080	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.04935	6.13261	K562	FUS
chr21	35446072	35446117	+	intron-Distal,intron-Proximal	4.54050	3.56577	HepG2	XRN2
chr21	35446042	35446121	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.43597	7.89388	HepG2	PRPF8
chr21	35497640	35497668	+	CDS,intron-Proximal	4.11669	5.88953	K562	DDX3X
chr21	35446045	35446114	+	intron-Distal,intron-Proximal	3.56441	4.01575	K562	NONO
chr21	35446062	35446129	+	intron-Distal,intron-Proximal	3.67234	3.30829	HepG2	CSTF2
chr21	35446042	35446126	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.80624	9.85132	K562	GEMIN5
chr21	35446061	35446144	+	intron-Distal,intron-Proximal	3.03064	5.21565	HepG2	NKRF
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	AP000320.7	ENSG00000272657.1	chr21	+	35475133	35475207	35445891	35446045	35497640	35497780	0.07000	0.00032	0.00836	included	K562	SRSF1
SE	AP000320.7	ENSG00000272657.1	chr21	+	35475133	35475211	35445891	35446045	35497640	35497780	0.05600	0.00006	0.00384	included	K562	FXR1
SE	AP000320.7	ENSG00000272657.1	chr21	+	35475133	35475207	35445891	35446045	35497640	35497780	0.06400	0.00001	0.00467	included	K562	DROSHA
SE	AP000320.7	ENSG00000272657.1	chr21	+	35475133	35475211	35445891	35446045	35497640	35497780	0.05300	0.00022	0.02335	included	K562	HNRNPUL1
SE	AP000320.7	ENSG00000272657.1	chr21	+	35475133	35475207	35445891	35446045	35497640	35497780	0.09500	0.00001	0.00077	included	K562	TARDBP
SE	AP000320.7	ENSG00000272657.1	chr21	+	35475133	35475207	35445891	35446045	35497640	35497780	0.07100	0.00013	0.00817	included	K562	PTBP1

AP000320.7

General Information

Functions

Localization

Domains (AlphaFold: AP000320.7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AP000320.7 is not avaliable on ENCORE database.

40 proteins are bound to AP000320.7 RNA:

eCLIP assay for AP000320.7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AP000320.7 is not available on ENCORE database.

No RBPs affect the gene expression of AP000320.7 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AP000320.7 is not available on ENCORE database.

6 RBPs can affect the splicing of AP000320.7 :

The Knockdown/knockout RNA-Seq assay for AP000320.7 is not avaliable on ENCORE database.