XRCC2

General Information

Gene Name       : XRCC2
Gene ID             : ENSG00000196584.2
Essential Gene : No

Functions

Localization

Domains (AlphaFold: XRCC2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878XRCC2ENSG00000196584.216.8813.7215.30ENCSR000AEF
HepG2XRCC2ENSG00000196584.26.3411.749.04ENCSR985KAT
K562XRCC2ENSG00000196584.234.2237.6135.91ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for XRCC2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • XRCC2 RNA is bound by 10 proteins.  







eCLIP assay for XRCC2 is not avaliable on ENCORE database.





10 proteins are bound to XRCC2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7152345440152345493-3'-UTR,intron-Distal3.393494.81289HepG2RBM22
chr7152343655152343733-3'-UTR,intron-Distal3.620654.40370K562AKAP1
chr7152373120152373227-5'-UTR,CDS,intron-Distal4.319979.03196HepG2NCBP2
chr7152345869152345927-CDS,intron-Distal3.528924.40383K562UCHL5
chr7152346043152346113-CDS,intron-Distal3.2235014.58628K562SAFB2
chr7152342661152342717-intron-Distal3.944186.79783K562SAFB2
chr7152354926152355000-intron-Distal3.793723.02234K562KHSRP
chr7152372981152373119-intron-Distal4.763574.07596K562GTF2F1
chr7152342717152342768-intron-Distal5.129618.45097K562SAFB2
chr7152355547152355662-intron-Distal3.671434.18434K562LSM11
chr7152357664152357740-intron-Distal,intron-Proximal4.474714.53454K562PRPF8
chr7152357671152357738-intron-Distal,intron-Proximal5.017016.13333K562RBM22
chr7152356912152357016-intron-Distal4.933027.69017K562ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for XRCC2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for XRCC2 is not available on ENCORE database.

  • 153 RBPs can affect the levels of XRCC2.  








The Knockdown/knockout RNA-Seq assay for XRCC2 is not available on ENCORE database.





153 RBPs can affect the gene expression of XRCC2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
XRCC2ENSG00000196584.2207.55700329.82340-0.668205.374604.58200HepG2ACO1
XRCC2ENSG00000196584.261.02590166.75450-1.450205.911605.16760HepG2AKAP1
XRCC2ENSG00000196584.253.99840126.92900-1.233003.370502.22870HepG2AKAP8
XRCC2ENSG00000196584.2181.02330331.42730-0.872507.986206.76570HepG2AKAP8L
XRCC2ENSG00000196584.237.30730137.98650-1.887008.026506.72680HepG2ASCC1
XRCC2ENSG00000196584.2191.49240492.93970-1.3641022.3324020.72340HepG2AUH
XRCC2ENSG00000196584.2123.95060326.49540-1.397304.895103.72790HepG2BCLAF1
XRCC2ENSG00000196584.236.55220616.54090-4.0762088.0485085.78680HepG2BOP1
XRCC2ENSG00000196584.2192.72820464.64830-1.2696015.4552013.88910HepG2CALR
XRCC2ENSG00000196584.2106.06660329.81710-1.6367021.7373020.26860HepG2CKAP4
XRCC2ENSG00000196584.236.7805097.69170-1.409304.348903.38630HepG2CNOT7
XRCC2ENSG00000196584.2231.58500566.01450-1.2893015.2162013.76370HepG2CPSF6
XRCC2ENSG00000196584.2222.20270452.72080-1.0267011.8462010.69370HepG2CELF1
XRCC2ENSG00000196584.2295.07580486.73330-0.722008.088306.92130HepG2DAZAP1
XRCC2ENSG00000196584.2214.98340305.06940-0.504903.539802.61120HepG2DDX19B
XRCC2ENSG00000196584.271.32150269.64910-1.9187019.1700017.58070HepG2DDX21
XRCC2ENSG00000196584.2183.01870263.90350-0.528002.563101.68650HepG2DDX24
XRCC2ENSG00000196584.228.81940159.76210-2.4708010.551009.40350HepG2DDX3X
XRCC2ENSG00000196584.279.92450135.07590-0.757102.710301.42670HepG2DDX47
XRCC2ENSG00000196584.2122.42540369.31740-1.593005.926904.84770HepG2DDX55
XRCC2ENSG00000196584.2297.58700642.75230-1.111007.644206.06270HepG2DDX59
XRCC2ENSG00000196584.2241.09800439.13590-0.865007.386705.80830HepG2DDX5
XRCC2ENSG00000196584.233.36140137.18250-2.039808.136407.12870HepG2DDX6
XRCC2ENSG00000196584.2155.09450253.90140-0.711103.940102.78350HepG2DHX30
XRCC2ENSG00000196584.2105.15210263.24280-1.3239012.0761010.69010HepG2DNAJC21
XRCC2ENSG00000196584.2137.32230260.93480-0.926107.845406.81820HepG2DNAJC2
XRCC2ENSG00000196584.2212.10770308.50070-0.540502.396801.53570HepG2EEF2
XRCC2ENSG00000196584.2123.09380248.33360-1.012505.663604.08820HepG2AGO1
XRCC2ENSG00000196584.28.80860131.93290-3.9047016.7078015.33370HepG2EIF2S1
XRCC2ENSG00000196584.2121.53650250.44020-1.043105.850404.56960HepG2EIF3D
XRCC2ENSG00000196584.2283.43160480.23770-0.760707.771406.50000HepG2EIF4G1
XRCC2ENSG00000196584.2183.60370460.02880-1.3251014.6915012.92630HepG2EIF4G2
XRCC2ENSG00000196584.2284.11590565.99870-0.9943014.3036013.10800HepG2ETF1
XRCC2ENSG00000196584.2235.55560322.35440-0.452602.339901.57290HepG2EWSR1
XRCC2ENSG00000196584.2163.70850256.98230-0.650503.445602.19090HepG2FASTKD2
XRCC2ENSG00000196584.2233.17160421.01710-0.852503.651002.77470HepG2FIP1L1
XRCC2ENSG00000196584.2303.93830566.99210-0.899603.616002.44870HepG2FTO
XRCC2ENSG00000196584.2269.65310147.052800.874704.965604.05880HepG2FXR1
XRCC2ENSG00000196584.2219.98070144.809400.603102.505801.66130HepG2G3BP2
XRCC2ENSG00000196584.2202.91780299.91370-0.563702.559001.58510HepG2GNB2L1
XRCC2ENSG00000196584.2206.59940641.61180-1.6349021.7331020.12350HepG2GPKOW
XRCC2ENSG00000196584.2105.67790265.76500-1.330509.820108.71310HepG2HNRNPA1
XRCC2ENSG00000196584.2216.23800447.34730-1.0488012.2936010.59130HepG2HNRNPA2B1
XRCC2ENSG00000196584.2203.42470295.61980-0.539202.521301.85670HepG2HNRNPC
XRCC2ENSG00000196584.2225.55180384.88440-0.771007.232606.14480HepG2HNRNPF
XRCC2ENSG00000196584.2246.85610138.073600.838104.411303.54520HepG2HNRNPK
XRCC2ENSG00000196584.2308.49020443.36080-0.523304.294803.46820HepG2HNRNPL
XRCC2ENSG00000196584.2124.12750612.30290-2.3024038.5120036.58660HepG2HNRNPLL
XRCC2ENSG00000196584.2218.05870293.66500-0.429502.453401.88090HepG2HNRNPU
XRCC2ENSG00000196584.2211.57790379.00090-0.841007.420706.28790HepG2IGF2BP1
XRCC2ENSG00000196584.234.34110138.72010-2.014208.564107.44680HepG2IGF2BP2
XRCC2ENSG00000196584.2219.87020299.96810-0.448203.028002.26400HepG2ILF2
XRCC2ENSG00000196584.2163.8452093.038700.816303.244901.93080HepG2KHDRBS1
XRCC2ENSG00000196584.2223.41260301.54060-0.432602.580601.59490HepG2KIF1C
XRCC2ENSG00000196584.2344.39620627.30730-0.865103.181402.28800HepG2LARP4
XRCC2ENSG00000196584.2202.84980293.79710-0.534402.565001.47230HepG2LARP7
XRCC2ENSG00000196584.2282.84500147.103800.943105.729104.79760HepG2MAGOH
XRCC2ENSG00000196584.2229.64060147.940500.634302.509801.90630HepG2MATR3
XRCC2ENSG00000196584.292.90830262.11280-1.496307.243805.62810HepG2METAP2
XRCC2ENSG00000196584.2448.01240624.49070-0.479102.205701.34670HepG2MTPAP
XRCC2ENSG00000196584.2173.38900265.65860-0.615603.109901.60970HepG2NIP7
XRCC2ENSG00000196584.2395.56830542.93070-0.456802.656501.92240HepG2NSUN2
XRCC2ENSG00000196584.225.1370089.27530-1.828406.279704.90660HepG2PABPC1
XRCC2ENSG00000196584.2212.43560290.67120-0.452402.451101.64920HepG2PARN
XRCC2ENSG00000196584.2120.91670383.67650-1.6659015.2320013.09930HepG2PCBP2
XRCC2ENSG00000196584.261.37090285.10430-2.215908.808907.45550HepG2PRPF8
XRCC2ENSG00000196584.2171.15640460.74300-1.4286017.5714016.24430HepG2PUF60
XRCC2ENSG00000196584.2310.32050489.11610-0.656407.003206.14880HepG2PUM1
XRCC2ENSG00000196584.2293.01510488.74820-0.738106.562205.54540HepG2PUM2
XRCC2ENSG00000196584.2243.36370335.95610-0.465203.019202.38280HepG2PUS1
XRCC2ENSG00000196584.2308.85490538.15820-0.801108.159906.79200HepG2RBM15
XRCC2ENSG00000196584.297.71030473.06230-2.2754041.0379039.50460HepG2RBM22
XRCC2ENSG00000196584.2163.6310094.338100.794402.900701.32190HepG2RBM47
XRCC2ENSG00000196584.2281.58070170.874300.720504.388003.73520HepG2NELFE
XRCC2ENSG00000196584.2334.57880159.156201.0718010.136509.07190HepG2RECQL
XRCC2ENSG00000196584.248.95310414.62100-3.0823049.4076047.39710HepG2RPLP0
XRCC2ENSG00000196584.298.32320363.70280-1.8872017.1646015.05870HepG2RPS10
XRCC2ENSG00000196584.272.81570243.68410-1.7427015.4718014.18170HepG2RPS19
XRCC2ENSG00000196584.2154.39310326.73670-1.081508.021406.70570HepG2RPS2
XRCC2ENSG00000196584.254.2382098.05140-0.854202.368701.62520HepG2RPS3A
XRCC2ENSG00000196584.243.37950282.04730-2.7009011.5664010.13710HepG2RRP9
XRCC2ENSG00000196584.2182.42930261.51840-0.519602.899102.24350HepG2SAFB2
XRCC2ENSG00000196584.2170.55050244.58330-0.520102.295501.43570HepG2SERBP1
XRCC2ENSG00000196584.2343.16150543.59630-0.663604.517103.64510HepG2SF3A3
XRCC2ENSG00000196584.2296.93470606.05320-1.0293011.4488010.10500HepG2SF3B1
XRCC2ENSG00000196584.2290.81990441.81580-0.603305.331304.41110HepG2SLBP
XRCC2ENSG00000196584.2190.31910361.24840-0.924603.588301.77310HepG2SLTM
XRCC2ENSG00000196584.2235.68030304.96930-0.371802.028301.46450HepG2SMN1
XRCC2ENSG00000196584.2227.68720377.51070-0.729504.189402.99320HepG2SMNDC1
XRCC2ENSG00000196584.2201.66890674.34250-1.7415018.2198016.25910HepG2SNRNP70
XRCC2ENSG00000196584.2105.87080534.29240-2.3353052.6971051.22980HepG2SRFBP1
XRCC2ENSG00000196584.2333.74400166.850801.000108.711707.97910HepG2SRSF1
XRCC2ENSG00000196584.2293.38860454.93710-0.632905.598104.75330HepG2SRSF5
XRCC2ENSG00000196584.2150.26020378.13770-1.3314017.2991015.82380HepG2SRSF7
XRCC2ENSG00000196584.2253.14930463.86780-0.8737010.525609.65010HepG2SSB
XRCC2ENSG00000196584.2343.90590517.37130-0.589205.744204.90780HepG2SUCLG1
XRCC2ENSG00000196584.2173.22040284.45900-0.715602.996702.02250HepG2SUPT6H
XRCC2ENSG00000196584.238.73510367.70950-3.2469014.5125013.17470HepG2SUPV3L1
XRCC2ENSG00000196584.2330.16240149.985501.1383011.2128010.20370HepG2TAF15
XRCC2ENSG00000196584.2164.22420596.83160-1.8617029.4603027.57270HepG2TARDBP
XRCC2ENSG00000196584.274.69220246.49910-1.722606.582605.16030HepG2TFIP11
XRCC2ENSG00000196584.254.82000285.32990-2.3799029.1666027.85960HepG2TIAL1
XRCC2ENSG00000196584.2171.98810287.90250-0.743305.825405.06120HepG2TRIM56
XRCC2ENSG00000196584.2213.63960360.26440-0.753902.837502.20130HepG2U2AF1
XRCC2ENSG00000196584.2103.80840488.45720-2.234306.400804.82010HepG2U2AF2
XRCC2ENSG00000196584.2345.65070476.49960-0.463202.015601.30670HepG2UBE2L3
XRCC2ENSG00000196584.2149.61090482.08660-1.6881030.6560028.84580HepG2UPF1
XRCC2ENSG00000196584.2175.96570336.86650-0.936902.356501.43650HepG2UPF2
XRCC2ENSG00000196584.2307.91910495.51920-0.686406.933405.35630HepG2UTP18
XRCC2ENSG00000196584.2316.92590395.85970-0.320801.931401.35490HepG2ZC3H8
XRCC2ENSG00000196584.236.37060530.20320-3.86570105.15630103.12280HepG2ZNF622
XRCC2ENSG00000196584.21543.673901136.917400.441104.524502.97270K562AARS
XRCC2ENSG00000196584.2387.706701694.52470-2.127807.654606.77760K562AGGF1
XRCC2ENSG00000196584.2743.006801861.58250-1.325104.619603.27190K562AKAP8
XRCC2ENSG00000196584.2364.588901763.12050-2.273808.298407.10660K562AKAP8L
XRCC2ENSG00000196584.21640.990002461.34720-0.584902.171101.64030K562AQR
XRCC2ENSG00000196584.2765.336701849.73150-1.273104.001002.88480K562ATP5C1
XRCC2ENSG00000196584.21149.218901562.97410-0.443604.153602.96290K562BCLAF1
XRCC2ENSG00000196584.21499.101202452.90140-0.710409.856608.15890K562BOP1
XRCC2ENSG00000196584.22370.901403464.29100-0.547105.316903.23220K562CKAP4
XRCC2ENSG00000196584.21841.524702955.45780-0.682504.471803.07720K562CNOT7
XRCC2ENSG00000196584.21433.950102608.05920-0.8630019.6303017.53200K562CPSF6
XRCC2ENSG00000196584.2712.354701185.74930-0.735108.260406.31050K562CSTF2
XRCC2ENSG00000196584.21497.715902098.01270-0.486309.057006.86670K562DDX21
XRCC2ENSG00000196584.2272.80020524.25460-0.942403.360202.19760K562DDX3X
XRCC2ENSG00000196584.21013.008301897.92900-0.905802.788901.91110K562DKC1
XRCC2ENSG00000196584.21970.177002587.08240-0.393002.517501.82570K562EIF2S2
XRCC2ENSG00000196584.21202.16940868.372900.469202.274901.37270K562EIF3A
XRCC2ENSG00000196584.21248.115501655.50080-0.407504.462602.80630K562EXOSC5
XRCC2ENSG00000196584.21723.124403307.62970-0.9408011.440509.59270K562FIP1L1
XRCC2ENSG00000196584.21724.063202653.79100-0.622208.559107.01350K562FMR1
XRCC2ENSG00000196584.21398.957502249.39350-0.685208.615506.90520K562FTO
XRCC2ENSG00000196584.21806.73820569.524401.6655049.2126046.84200K562FXR1
XRCC2ENSG00000196584.2563.62030899.75320-0.674807.872805.32710K562G3BP1
XRCC2ENSG00000196584.21406.085702489.99160-0.8245015.3103013.40770K562GPKOW
XRCC2ENSG00000196584.21795.205703447.97240-0.941607.575906.31000K562GRSF1
XRCC2ENSG00000196584.2669.806701136.24550-0.762504.248401.79020K562HLTF
XRCC2ENSG00000196584.2535.501101587.17070-1.5675013.301609.99810K562HNRNPA2B1
XRCC2ENSG00000196584.21575.490101244.562100.340102.802202.20170K562HNRNPC
XRCC2ENSG00000196584.2793.992201708.62560-1.105605.032302.08920K562HNRNPUL1
XRCC2ENSG00000196584.22735.949304484.68630-0.713007.982106.64600K562HSPD1
XRCC2ENSG00000196584.2512.13330940.88490-0.877508.788106.57360K562IGF2BP2
XRCC2ENSG00000196584.2533.62780957.10630-0.8428011.580908.99660K562IGF2BP3
XRCC2ENSG00000196584.2581.796201871.49440-1.685605.013803.83870K562KIF1C
XRCC2ENSG00000196584.21026.954502126.30770-1.0500013.1649010.99610K562KRR1
XRCC2ENSG00000196584.21437.27450989.077700.539106.651405.32070K562MAGOH
XRCC2ENSG00000196584.2650.170301791.17010-1.462003.809102.47920K562MAK16
XRCC2ENSG00000196584.21554.86990987.108300.655409.774107.93100K562MATR3
XRCC2ENSG00000196584.2972.488602096.49310-1.108203.075402.10760K562MBNL1
XRCC2ENSG00000196584.21467.627002430.53630-0.7278012.6468010.70390K562METAP2
XRCC2ENSG00000196584.21820.202302206.11040-0.277402.431101.67170K562MTPAP
XRCC2ENSG00000196584.2505.721901469.45610-1.538904.837803.56540K562NAA15
XRCC2ENSG00000196584.21624.428002451.31500-0.5936016.7365015.11170K562NSUN2
XRCC2ENSG00000196584.2277.701101388.78630-2.3222025.8499022.17120K562PABPN1
XRCC2ENSG00000196584.2716.78440966.70510-0.431504.083802.42570K562PCBP1
XRCC2ENSG00000196584.22747.803402105.784600.383802.994402.12980K562PCBP3
XRCC2ENSG00000196584.21107.156101480.33380-0.419103.191901.50890K562PKM
XRCC2ENSG00000196584.22179.016901615.150600.431905.482904.35550K562POLR2G
XRCC2ENSG00000196584.22106.358403754.56450-0.8339010.180608.32500K562PPIG
XRCC2ENSG00000196584.2661.010101651.56600-1.321108.897405.83370K562PPP1R8
XRCC2ENSG00000196584.2875.040401330.94580-0.605002.245501.56590K562PRPF8
XRCC2ENSG00000196584.2727.603401115.81340-0.616904.664803.44630K562PSIP1
XRCC2ENSG00000196584.21492.95930960.932600.635609.504208.32510K562PTBP1
XRCC2ENSG00000196584.2248.757001749.31320-2.8140010.299409.29750K562PUS1
XRCC2ENSG00000196584.2404.716901703.79460-2.073807.431206.49060K562RBM15
XRCC2ENSG00000196584.2963.787101708.64370-0.826103.744301.88360K562RBM39
XRCC2ENSG00000196584.21379.39160969.756100.508204.807303.32040K562NELFE
XRCC2ENSG00000196584.21085.95910776.480800.483802.215601.32850K562RPS3
XRCC2ENSG00000196584.22052.464701439.320100.511904.030202.71390K562SAFB
XRCC2ENSG00000196584.22051.926001488.009000.463504.755102.84360K562SDAD1
XRCC2ENSG00000196584.2647.431901270.34630-0.972404.887203.13910K562SF1
XRCC2ENSG00000196584.2989.16650676.570100.547902.385701.59370K562SF3B4
XRCC2ENSG00000196584.2451.667601458.50170-1.6912013.4764010.23750K562SNRNP200
XRCC2ENSG00000196584.21497.00460942.006900.668209.405208.11090K562SRSF1
XRCC2ENSG00000196584.2622.46970889.58660-0.515104.506603.11020K562SRSF5
XRCC2ENSG00000196584.21514.928901872.43000-0.305703.985602.55940K562SRSF7
XRCC2ENSG00000196584.2862.961601744.87900-1.015805.790203.49920K562SUPT6H
XRCC2ENSG00000196584.22381.055901620.118300.555409.087007.59140K562SYNCRIP
XRCC2ENSG00000196584.21033.04710678.129800.607203.008601.34830K562TBRG4
XRCC2ENSG00000196584.2644.00360902.33650-0.486603.955502.61430K562TRA2A
XRCC2ENSG00000196584.2787.701001139.84530-0.533103.847202.69600K562TRIM56
XRCC2ENSG00000196584.22951.126603870.20300-0.391103.097801.61480K562TRIP6
XRCC2ENSG00000196584.21947.512202642.87400-0.440502.907801.60570K562TROVE2
XRCC2ENSG00000196584.21985.693402599.17110-0.388403.075302.31930K562UPF1
XRCC2ENSG00000196584.2694.112501772.83090-1.352804.119802.43670K562UTP18
XRCC2ENSG00000196584.21494.635702224.04520-0.573402.243101.45650K562WDR3
XRCC2ENSG00000196584.21690.530702773.40520-0.714202.652101.81000K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for XRCC2 is not available on ENCORE database.





5 RBPs can affect the splicing of XRCC2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEXRCC2ENSG00000196584.2chr7-1523577851523578671523435881523464481523731251523732500.146000.000950.07381includedK562XRCC6
SEXRCC2ENSG00000196584.2chr7-1523577851523578671523418631523464481523731251523732500.104000.000640.02743includedK562FXR1
SEXRCC2ENSG00000196584.2chr7-1523497171523498351523418631523464481523577851523578670.117000.000000.00004includedK562UTP18
SEXRCC2ENSG00000196584.2chr7-152357785152357867152341863152346448152373125152373250-0.558000.000000.00000excludedK562U2AF2
SEXRCC2ENSG00000196584.2chr7-1523498061523498351523418631523464481523577851523578670.053000.002890.06064includedK562RBM15
SEXRCC2ENSG00000196584.2chr7-152357785152357867152341863152346448152373125152373250-0.278000.003100.06390excludedK562RBM15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for XRCC2 is not avaliable on ENCORE database.