FOPNL

General Information

Gene Name       : FOPNL
Gene ID             : ENSG00000133393.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FOPNL)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FOPNLENSG00000133393.1244.3935.5039.95ENCSR000AEF
HepG2FOPNLENSG00000133393.1229.7163.6946.70ENCSR985KAT
K562FOPNLENSG00000133393.1267.3876.2171.79ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FOPNL is not avaliable on ENCORE database.



Proteins bound to RNA
  • FOPNL RNA is bound by 12 proteins.  







eCLIP assay for FOPNL is not avaliable on ENCORE database.





12 proteins are bound to FOPNL RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr161596092615960958-3'-UTR,intron-Distal,intron-Proximal3.271296.68854K562FAM120A
chr161596115915961233-3'-UTR,intron-Distal,intron-Proximal4.0569116.27065K562FAM120A
chr161595976615959862-3'-UTR,intron-Distal3.7704513.10119K562LIN28B
chr161596036315960376-3'-UTR,intron-Distal3.107374.79181K562FAM120A
chr161596043915960509-3'-UTR,intron-Distal3.5256520.04012K562FAM120A
chr161595987515959924-3'-UTR,intron-Distal3.5876110.17773K562FAM120A
chr161595980315959919-3'-UTR,intron-Distal4.691335.29571HepG2FUBP3
chr161596072715960809-3'-UTR,intron-Distal3.7323612.13863K562FAM120A
chr161596128015961341-3'-UTR,CDS,intron-Distal3.591765.95764K562YBX3
chr161596133315961422-3'-UTR,CDS,intron-Distal4.003713.44423K562BUD13
chr161596054215960644-3'-UTR,intron-Distal3.3752020.25503K562PUM2
chr161598241215982450-5'-UTR,CDS,intron-Distal4.976635.39850K562DDX3X
chr161597778015977832-intron-Distal,intron-Proximal3.966143.71735K562TIA1
chr161596410715964223-intron-Distal4.046634.46313K562HNRNPL
chr161597730715977393-intron-Distal4.795017.39068HepG2ILF3
chr161597718015977228-intron-Distal4.023313.31709K562ILF3
chr161597716615977224-intron-Distal3.016636.82116HepG2ILF3
chr161598216915982329-intron-Distal3.326824.34776K562ILF3
chr161598221115982312-intron-Distal3.392176.39581HepG2EFTUD2
chr161597814215978233-intron-Distal,intron-Proximal4.410714.72162K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FOPNL is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FOPNL is not available on ENCORE database.

  • 96 RBPs can affect the levels of FOPNL.  








The Knockdown/knockout RNA-Seq assay for FOPNL is not available on ENCORE database.





96 RBPs can affect the gene expression of FOPNL :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FOPNLENSG00000133393.8946.550101133.30240-0.259802.646702.04960HepG2ACO1
FOPNLENSG00000133393.8731.772501138.67650-0.6379011.210709.80030HepG2AKAP8L
FOPNLENSG00000133393.81284.361401717.40770-0.419203.318002.45740HepG2ASCC1
FOPNLENSG00000133393.81382.863101860.70920-0.428207.200906.17760HepG2AUH
FOPNLENSG00000133393.8614.438901059.01000-0.785404.306003.20710HepG2BCLAF1
FOPNLENSG00000133393.81375.632001863.36550-0.437804.228403.50620HepG2BOP1
FOPNLENSG00000133393.8752.659002082.91110-1.468507.455405.83730HepG2CCAR1
FOPNLENSG00000133393.81113.271801631.64320-0.551505.385104.32550HepG2CIRBP
FOPNLENSG00000133393.8683.096501133.11560-0.7301016.3365015.00610HepG2CKAP4
FOPNLENSG00000133393.81249.809401710.71270-0.452903.368602.61760HepG2CPSF6
FOPNLENSG00000133393.81357.084701774.99580-0.387305.423104.57820HepG2CELF1
FOPNLENSG00000133393.8822.113401048.16970-0.350504.433403.40860HepG2DDX19B
FOPNLENSG00000133393.81292.867801942.62620-0.587402.594801.64960HepG2DDX59
FOPNLENSG00000133393.81242.197601707.82600-0.459303.349902.67720HepG2DDX6
FOPNLENSG00000133393.8659.750601084.27870-0.7167012.6802011.44550HepG2DKC1
FOPNLENSG00000133393.8916.962801216.00260-0.407206.421605.48680HepG2DNAJC2
FOPNLENSG00000133393.8931.284701314.64300-0.497404.129903.02730HepG2EEF2
FOPNLENSG00000133393.8740.964301641.96540-1.1479018.7660017.32060HepG2EIF2S1
FOPNLENSG00000133393.8701.768601258.23860-0.842305.599203.97480HepG2EIF2S2
FOPNLENSG00000133393.8645.433301067.25820-0.725607.134705.74420HepG2EIF3D
FOPNLENSG00000133393.81281.202601814.65710-0.502204.012903.24710HepG2EIF4A3
FOPNLENSG00000133393.81312.737201803.71680-0.458404.523203.49840HepG2EIF4G2
FOPNLENSG00000133393.8834.745801107.49180-0.407903.665402.70470HepG2EWSR1
FOPNLENSG00000133393.8767.13090953.74300-0.314102.390801.30720HepG2FAM120A
FOPNLENSG00000133393.8717.05550902.49920-0.331802.403701.33450HepG2FASTKD2
FOPNLENSG00000133393.81258.368401785.57340-0.504804.201702.16330HepG2FMR1
FOPNLENSG00000133393.81432.393501830.63360-0.353902.540401.87620HepG2FXR1
FOPNLENSG00000133393.8818.936401698.32810-1.0523015.3896013.88290HepG2G3BP1
FOPNLENSG00000133393.81207.555501802.80090-0.578205.968404.64880HepG2G3BP2
FOPNLENSG00000133393.81187.467801939.34020-0.707706.724205.75350HepG2GPKOW
FOPNLENSG00000133393.8437.885001238.51110-1.5000033.6455031.87560HepG2HNRNPA1
FOPNLENSG00000133393.8926.054101377.64040-0.573006.350405.33410HepG2HNRNPC
FOPNLENSG00000133393.81079.097801448.48950-0.424704.032403.18230HepG2HNRNPF
FOPNLENSG00000133393.81171.843301719.36790-0.553105.612604.64560HepG2HNRNPK
FOPNLENSG00000133393.81409.524201738.59960-0.302704.668103.81010HepG2HNRNPL
FOPNLENSG00000133393.81317.211501850.73770-0.490604.102003.35100HepG2HNRNPLL
FOPNLENSG00000133393.81082.986501368.53030-0.337604.342203.59710HepG2HNRNPU
FOPNLENSG00000133393.81014.422001426.36670-0.491705.582104.59130HepG2IGF2BP1
FOPNLENSG00000133393.8931.877601726.36560-0.8895012.5852011.26480HepG2IGF2BP2
FOPNLENSG00000133393.81015.777001397.90400-0.460708.907907.66550HepG2ILF2
FOPNLENSG00000133393.81272.671401736.33110-0.448202.518701.57160HepG2KHSRP
FOPNLENSG00000133393.81147.211301831.27150-0.674707.436006.37430HepG2MAGOH
FOPNLENSG00000133393.81126.606701841.56630-0.708907.347006.35660HepG2MATR3
FOPNLENSG00000133393.81150.490401884.98250-0.712307.937106.89020HepG2NCBP2
FOPNLENSG00000133393.8656.910201024.47550-0.641106.510204.32640HepG2NIP7
FOPNLENSG00000133393.81155.613301892.55980-0.7117014.2335012.56560HepG2NOL12
FOPNLENSG00000133393.8658.899201099.71210-0.739003.224302.03720HepG2NONO
FOPNLENSG00000133393.81333.307601640.95020-0.299502.069301.41810HepG2NSUN2
FOPNLENSG00000133393.8875.605501678.86950-0.9391013.1352011.58860HepG2PABPC4
FOPNLENSG00000133393.81152.766301553.23120-0.430206.135805.38380HepG2PTBP1
FOPNLENSG00000133393.81242.851901806.60220-0.539606.883005.99800HepG2PUF60
FOPNLENSG00000133393.81435.079801917.77430-0.418309.136208.19080HepG2PUM1
FOPNLENSG00000133393.81024.594701916.38200-0.9033020.4481018.72820HepG2PUM2
FOPNLENSG00000133393.81433.489401682.15410-0.230801.944201.40590HepG2QKI
FOPNLENSG00000133393.8582.638901109.36870-0.929109.884207.91410HepG2RCC2
FOPNLENSG00000133393.8962.058901728.58410-0.8454021.7637020.52730HepG2NELFE
FOPNLENSG00000133393.81337.340001609.96500-0.267702.468101.88180HepG2RECQL
FOPNLENSG00000133393.81217.868701560.10810-0.357302.732602.05250HepG2RPLP0
FOPNLENSG00000133393.8797.188301038.43370-0.381403.090802.44620HepG2RPS19
FOPNLENSG00000133393.81001.901101260.00560-0.330702.036101.34340HepG2RPS2
FOPNLENSG00000133393.8724.962701240.29270-0.774706.661505.42840HepG2RPS3A
FOPNLENSG00000133393.81771.207601299.317800.446902.954802.25730HepG2SF3A3
FOPNLENSG00000133393.81309.396801831.93060-0.484503.634102.83480HepG2SF3B1
FOPNLENSG00000133393.81270.398601617.08580-0.348104.550403.82020HepG2SF3B4
FOPNLENSG00000133393.81368.412001732.22170-0.340105.508204.57540HepG2SLBP
FOPNLENSG00000133393.81193.249501421.20970-0.252203.179202.49730HepG2SMN1
FOPNLENSG00000133393.8566.874901341.76270-1.2430015.6360013.30170HepG2SMNDC1
FOPNLENSG00000133393.81662.335902016.73200-0.278803.667703.11560HepG2SRFBP1
FOPNLENSG00000133393.82038.935001687.899100.272503.524703.00740HepG2SRSF1
FOPNLENSG00000133393.81368.440401970.97650-0.526403.783902.59530HepG2SRSF3
FOPNLENSG00000133393.81291.093901783.74010-0.466308.192307.18890HepG2SRSF5
FOPNLENSG00000133393.81053.216701423.03070-0.434203.861803.06000HepG2SRSF7
FOPNLENSG00000133393.81188.320101373.20580-0.208602.053101.56290HepG2SRSF9
FOPNLENSG00000133393.81132.445301751.04520-0.6288014.1044013.12720HepG2SSB
FOPNLENSG00000133393.81794.279102028.61800-0.177101.951701.41250HepG2SUCLG1
FOPNLENSG00000133393.8676.164101192.75960-0.818904.841503.98500HepG2SUPV3L1
FOPNLENSG00000133393.81348.387301803.59390-0.419603.830402.99270HepG2TARDBP
FOPNLENSG00000133393.8633.678501329.68610-1.0693023.7632022.56780HepG2TIAL1
FOPNLENSG00000133393.8932.669301341.67650-0.524609.216808.28030HepG2TRIM56
FOPNLENSG00000133393.81278.017901764.95150-0.465705.546704.25680HepG2TUFM
FOPNLENSG00000133393.8868.933601152.29370-0.407205.567704.63060HepG2UPF1
FOPNLENSG00000133393.8788.544501174.13720-0.574302.640201.93200HepG2XRN2
FOPNLENSG00000133393.8789.678101221.30090-0.6291012.8647011.59080HepG2ZC3H8
FOPNLENSG00000133393.82003.727602421.00940-0.272902.213701.62760K562AKAP8L
FOPNLENSG00000133393.82300.111401863.344400.303702.224901.44840K562BOP1
FOPNLENSG00000133393.8487.12260774.31320-0.668606.431904.65300K562CCAR1
FOPNLENSG00000133393.81742.463001386.121900.330003.253901.60930K562CEBPZ
FOPNLENSG00000133393.82053.171902524.27600-0.298003.628702.35440K562CPEB4
FOPNLENSG00000133393.81540.329901900.06840-0.302802.656601.94890K562EIF2S2
FOPNLENSG00000133393.8953.544201271.92660-0.415602.547001.55860K562EIF3D
FOPNLENSG00000133393.81904.192701476.443600.367005.069104.28470K562FXR1
FOPNLENSG00000133393.82429.069501758.711600.465803.255702.47810K562G3BP2
FOPNLENSG00000133393.81076.473901585.47200-0.558607.587805.88640K562HNRNPA1
FOPNLENSG00000133393.8850.020201470.55370-0.790807.539206.60040K562HNRNPC
FOPNLENSG00000133393.81348.532401755.74380-0.380704.828703.63890K562HNRNPU
FOPNLENSG00000133393.83200.215002614.183100.291702.275101.54920K562HSPD1
FOPNLENSG00000133393.83320.021802569.378800.369703.618502.65920K562KIF1C
FOPNLENSG00000133393.81453.581501930.63560-0.409503.875902.76870K562MATR3
FOPNLENSG00000133393.81378.891101846.45420-0.421204.495603.36190K562METAP2
FOPNLENSG00000133393.81500.461501770.19550-0.238502.742601.93750K562MTPAP
FOPNLENSG00000133393.82880.305702017.501800.513603.907402.80870K562NAA15
FOPNLENSG00000133393.81799.449601417.655200.343903.633702.20510K562NCBP2
FOPNLENSG00000133393.81793.124101155.831400.633407.725106.46540K562PRPF8
FOPNLENSG00000133393.81045.447901318.43950-0.334702.132901.34940K562PSIP1
FOPNLENSG00000133393.84165.165903404.999600.290602.344601.59410K562PUF60
FOPNLENSG00000133393.84682.190503621.243000.370604.002102.69750K562PUM1
FOPNLENSG00000133393.83348.519502401.145900.479703.584802.97850K562PUS1
FOPNLENSG00000133393.81458.044601802.53110-0.306002.108001.37910K562RBM22
FOPNLENSG00000133393.8894.779501202.58740-0.426503.937402.75400K562RCC2
FOPNLENSG00000133393.81465.352101896.77180-0.372302.721701.63760K562NELFE
FOPNLENSG00000133393.81346.535802064.26000-0.616406.980205.29930K562RPS3
FOPNLENSG00000133393.81697.434701421.781000.255602.535901.41890K562SRSF7
FOPNLENSG00000133393.82138.835901599.858700.418803.896002.33850K562SSB
FOPNLENSG00000133393.82280.611101855.661100.297404.780003.69480K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FOPNL is not available on ENCORE database.





15 RBPs can affect the splicing of FOPNL :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFOPNLENSG00000133393.8chr16-159673471596748415959576159613731597786415978085-0.095000.000910.03469excludedK562PRPF8
SEFOPNLENSG00000133393.8chr16-159736601597374515961035159613731597786415978062-0.208000.001160.08866excludedHepG2PRPF8
SEFOPNLENSG00000133393.8chr16-1597680515976905159736601597374515977864159780620.067000.000020.00142includedK562AKAP8L
SEFOPNLENSG00000133393.8chr16-159778641597806215973660159737451598241415982482-0.065000.000050.00304excludedK562AKAP8L
SEFOPNLENSG00000133393.8chr16-1596734715967484159611631596137315977864159780620.110000.000430.08691includedHepG2ILF3
SEFOPNLENSG00000133393.8chr16-1597366015973745159673471596748415982414159824600.071000.000350.07987includedK562WDR43
SEFOPNLENSG00000133393.8chr16-159768051597687715973660159737451597786415978062-0.074000.005230.05501excludedHepG2U2AF2
SEFOPNLENSG00000133393.8chr16-159778641597806215973660159737451598241415982482-0.055000.000910.01134excludedK562AQR
SEFOPNLENSG00000133393.8chr16-1597786415978062159736601597374515982414159824800.072000.001130.04346includedK562FXR1
SEFOPNLENSG00000133393.8chr16-159778641597798115973660159737451598241415982450-0.230000.000630.05105excludedK562SUPV3L1
SEFOPNLENSG00000133393.8chr16-159778641597806215973660159737451598241415982482-0.111000.000000.00000excludedK562PUS1
SEFOPNLENSG00000133393.8chr16-159768051597687715973660159737451597786415978062-0.074000.002970.09873excludedHepG2SFPQ
SEFOPNLENSG00000133393.8chr16-159736601597374515967347159674841597786415978062-0.078000.000160.06617excludedK562BUD13
SEFOPNLENSG00000133393.8chr16-1597680515976877159736601597374515977864159780850.053000.003550.08655includedK562UTP18
SEFOPNLENSG00000133393.8chr16-159778641597806215973660159737451598241415982482-0.080000.000010.00093excludedK562UTP18
SEFOPNLENSG00000133393.8chr16-159778641597806215973660159737451598241415982482-0.087000.000000.00006excludedK562RBM15
SEFOPNLENSG00000133393.8chr16-1597680515976905159736601597374515977864159780620.113000.000000.00000includedK562AGGF1
SEFOPNLENSG00000133393.8chr16-159778641597806215973660159737451598241415982482-0.072000.000010.00047excludedK562AGGF1
SEFOPNLENSG00000133393.8chr16-1597680515976905159736601597374515977864159780850.209000.000000.00001includedHepG2HNRNPC
SEFOPNLENSG00000133393.8chr16-1597680515976905159736601597374515977864159780850.436000.000000.00000includedK562HNRNPC
A3SSFOPNLENSG00000133393.8chr16-1597786415978085159778641597806215982414159824720.255000.000000.00000longerK562AQR
MXEFOPNLENSG00000133393.8chr16-15973660159737771597786415978085159673471596748415982414159824720.223000.000000.000001includedK562AQR
MXEFOPNLENSG00000133393.8chr16-15973660159737851597786415978085159673471596748415982414159824720.223000.000000.000001includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FOPNL is not avaliable on ENCORE database.