CA8

General Information

Gene Name       : CA8
Gene ID             : ENSG00000178538.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CA8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CA8ENSG00000178538.90.040.010.03ENCSR000AEF
HepG2CA8ENSG00000178538.90.030.090.06ENCSR985KAT
K562CA8ENSG00000178538.923.0322.6322.83ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CA8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CA8 RNA is bound by 23 proteins.  







eCLIP assay for CA8 is not avaliable on ENCORE database.





23 proteins are bound to CA8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr86110119161101252-3'-UTR,intron-Distal3.434183.42164K562UPF1
chr86110250261102558-3'-UTR,intron-Distal3.714673.47293K562U2AF2
chr86110231061102448-3'-UTR,intron-Distal5.0283217.34673K562PUM2
chr86119383361193947-5'-UTR,intron-Distal,intron-Proximal3.517743.74019K562DDX3X
chr86119236361192448-CDS,intron-Distal,intron-Proximal3.559205.01301K562U2AF2
chr86113943461139499-CDS,intron-Distal,intron-Proximal4.679756.36164K562DDX24
chr86119358861193609-CDS,intron-Distal3.7862313.93817K562AQR
chr86113941361139433-CDS,intron-Distal,intron-Proximal4.038674.89208K562AQR
chr86119217561192256-CDS,intron-Distal,intron-Proximal5.035846.04760K562AQR
chr86119358661193707-CDS,intron-Distal3.094075.42026K562GRWD1
chr86113712361137173-CDS,intron-Distal,intron-Proximal3.147133.17610K562EFTUD2
chr86114484461144922-CDS,intron-Distal3.896243.16390K562SRSF1
chr86117858761178657-CDS,intron-Distal,intron-Proximal4.930433.91589K562SF3B4
chr86113530661135367-CDS,intron-Distal,intron-Proximal4.875768.52787K562AQR
chr86119359861193692-CDS,intron-Distal3.893923.23397K562SRSF7
chr86119240261192442-CDS,intron-Distal,intron-Proximal3.719843.02919K562GRWD1
chr86119238361192449-CDS,intron-Distal,intron-Proximal3.500658.59407K562BUD13
chr86113698161137100-CDS,intron-Distal,intron-Proximal4.566315.97994K562AQR
chr86119238461192469-CDS,intron-Distal,intron-Proximal4.377536.86590K562SF3B4
chr86113706561137123-CDS,intron-Distal,intron-Proximal3.695564.75435K562EFTUD2
chr86119240061192457-CDS,intron-Distal,intron-Proximal4.432627.50107K562AQR
chr86116237461162462-intron-Distal4.524136.70273K562QKI
chr86115690361156968-intron-Distal4.074294.07784K562SAFB2
chr86118883861188908-intron-Distal4.039475.63677K562PTBP1
chr86114934861149472-intron-Distal3.021003.80706K562KHSRP
chr86118612961186257-intron-Distal4.285553.90241K562MATR3
chr86115626761156337-intron-Distal3.053993.55860K562SAFB2
chr86118793661187956-intron-Distal3.741403.32889K562MATR3
chr86114928561149348-intron-Distal4.334715.02888K562KHSRP
chr86112751161127564-intron-Distal3.704904.57279K562PTBP1
chr86111898061119000-intron-Distal4.349214.07810K562UPF1
chr86116137961161425-intron-Distal3.909843.04254K562UCHL5
chr86113938561139413-intron-Distal,intron-Proximal5.628629.95272K562AQR
chr86117836261178412-intron-Distal,intron-Proximal3.554154.10408K562KHSRP
chr86118790661187936-intron-Distal4.177104.72029K562MATR3
chr86112728961127353-intron-Distal5.356088.50063K562PTBP1
chr86113507961135129-intron-Distal,intron-Proximal3.518454.06013K562PRPF8
chr86117839861178453-intron-Distal,intron-Proximal4.677985.09266K562RBM22
chr86115017361150312-intron-Distal4.673186.35761K562HNRNPM
chr86112004761120086-intron-Distal4.410415.99105K562UPF1
chr86118788161187959-intron-Distal4.9787110.02898K562PTBP1
chr86118850661188556-intron-Distal3.959993.84001K562HNRNPM
chr86112150561121560-intron-Distal,intron-Proximal3.743014.52210K562KHSRP
chr86118385061183921-intron-Distal3.580285.02233K562PTBP1
chr86115272161152797-intron-Distal4.117033.45817K562MATR3
chr86115346761153529-intron-Distal6.1117924.76467K562PTBP1
chr86118740961187466-intron-Distal3.609563.30744K562PTBP1
chr86115646161156508-intron-Distal3.742043.33164K562SAFB2
chr86118813961188190-intron-Distal3.282203.43500K562MATR3
chr86111939861119482-intron-Distal3.934189.37566K562UPF1
chr86118881461188942-intron-Distal3.9919412.71949K562MATR3
chr86118813961188193-intron-Distal4.109564.69074K562PTBP1
chr86111935861119452-intron-Distal4.466674.96063K562LIN28B
chr86112017261120209-intron-Distal5.121377.21253K562UPF1
chr86118249861182603-intron-Distal4.383755.01208K562MATR3
chr86116774161167821-intron-Distal3.903633.04054K562GTF2F1
chr86119356461193568-intron-Distal4.9508813.38267K562AQR
chr86115680461156884-intron-Distal3.176543.46712K562SAFB2
chr86113702461137065-intron-Distal,intron-Proximal4.550813.65355K562EFTUD2
chr86118759061187669-intron-Distal4.3518410.73739K562HNRNPM
chr86111904061119135-intron-Distal5.1549319.05397K562UPF1
chr86118784961187906-intron-Distal3.330853.22348K562MATR3
chr86113935961139385-intron-Distal,intron-Proximal4.486073.11721K562AQR
chr86115346861153532-intron-Distal3.779513.23532K562MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CA8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CA8 is not available on ENCORE database.

  • 58 RBPs can affect the levels of CA8.  








The Knockdown/knockout RNA-Seq assay for CA8 is not available on ENCORE database.





58 RBPs can affect the gene expression of CA8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CA8ENSG00000178538.52382.168301732.163700.459609.332508.36930K562AGGF1
CA8ENSG00000178538.52473.475001802.403700.456505.347404.42260K562AKAP8L
CA8ENSG00000178538.51676.623702168.34240-0.371003.991902.45580K562APOBEC3C
CA8ENSG00000178538.52206.470201891.172200.222402.241501.42760K562ATP5C1
CA8ENSG00000178538.51560.073201304.013200.258603.016302.01620K562BCLAF1
CA8ENSG00000178538.51371.75460960.530000.514004.733103.58000K562BOP1
CA8ENSG00000178538.51578.578101100.117600.520906.664604.33380K562CEBPZ
CA8ENSG00000178538.52082.060701499.529100.473402.472201.47800K562CNOT7
CA8ENSG00000178538.51445.525501719.36040-0.250302.511701.46040K562CPEB4
CA8ENSG00000178538.51247.147001021.351200.288102.165901.46330K562CPSF6
CA8ENSG00000178538.54645.025703021.720700.6202012.9169010.89730K562CELF1
CA8ENSG00000178538.51780.344001264.507600.493507.589805.56130K562DDX21
CA8ENSG00000178538.51107.217601353.58970-0.289902.240601.31150K562DDX3X
CA8ENSG00000178538.52278.433801779.191300.356705.779704.88910K562DDX47
CA8ENSG00000178538.51646.190701137.450800.533204.075702.48970K562EEF2
CA8ENSG00000178538.51615.517101099.035100.555705.985204.60310K562EFTUD2
CA8ENSG00000178538.51199.792201447.30560-0.270602.604501.90210K562EIF2S2
CA8ENSG00000178538.51049.544101414.19390-0.430204.020103.03240K562EIF4A3
CA8ENSG00000178538.51386.827001039.138200.416302.945502.06230K562FMR1
CA8ENSG00000178538.51251.94960880.736200.507304.252003.09690K562FTO
CA8ENSG00000178538.51212.764301470.70680-0.278202.705002.10580K562FXR1
CA8ENSG00000178538.51367.75390975.164900.488005.003203.93880K562GPKOW
CA8ENSG00000178538.51965.131801206.498500.703703.204101.86080K562HNRNPA2B1
CA8ENSG00000178538.51488.850101114.451300.417804.238203.51560K562HNRNPC
CA8ENSG00000178538.52096.214101644.868500.349702.646101.44320K562HNRNPK
CA8ENSG00000178538.51541.646001040.025700.567805.118703.80740K562HNRNPM
CA8ENSG00000178538.51240.396801718.69370-0.470506.878505.46600K562HNRNPU
CA8ENSG00000178538.52678.942201912.769700.485906.061804.73320K562KIF1C
CA8ENSG00000178538.51351.376101727.28920-0.354103.481802.43140K562MATR3
CA8ENSG00000178538.52567.155702142.789500.260602.142901.35840K562MBNL1
CA8ENSG00000178538.51370.63030951.858900.525905.800904.50380K562METAP2
CA8ENSG00000178538.52044.893001501.943000.445103.020602.09140K562NAA15
CA8ENSG00000178538.52165.267901437.393900.5910018.7251017.02210K562NSUN2
CA8ENSG00000178538.52052.142001440.610500.510402.806301.56220K562PABPC1
CA8ENSG00000178538.51596.244001055.060800.597302.396401.48900K562PABPN1
CA8ENSG00000178538.52084.671901341.075600.636306.883905.56990K562PCBP3
CA8ENSG00000178538.51651.163101028.644900.6826011.508909.93280K562POLR2G
CA8ENSG00000178538.51513.367201069.486200.500704.824903.83780K562PRPF8
CA8ENSG00000178538.53274.077102794.258600.228502.520901.60350K562PUM2
CA8ENSG00000178538.53336.220501787.426500.9002016.9781015.67360K562PUS1
CA8ENSG00000178538.52522.904201741.630400.534509.888608.79480K562RBM15
CA8ENSG00000178538.51334.307301696.89710-0.346802.621301.56070K562NELFE
CA8ENSG00000178538.5999.206001341.22060-0.424703.332902.22500K562RPS3
CA8ENSG00000178538.51529.403201093.550700.483803.185501.75860K562RRP9
CA8ENSG00000178538.51667.84070964.716500.789703.203601.88440K562SF1
CA8ENSG00000178538.51013.582901418.39610-0.484804.312303.31130K562SF3A3
CA8ENSG00000178538.51204.01900927.322400.376602.405101.50310K562SF3B1
CA8ENSG00000178538.51013.04240657.451600.623606.297904.39490K562SLBP
CA8ENSG00000178538.51801.922701108.172200.701302.873001.61470K562SNRNP200
CA8ENSG00000178538.51723.128801453.182400.245703.137702.14730K562SRPK2
CA8ENSG00000178538.51813.140401128.557900.6839012.028209.54950K562SRSF7
CA8ENSG00000178538.51557.227501035.568700.588505.625104.13990K562SUPV3L1
CA8ENSG00000178538.51126.846901668.37190-0.566106.172905.08050K562TARDBP
CA8ENSG00000178538.51187.891801609.31400-0.438004.991403.84140K562TIA1
CA8ENSG00000178538.51824.794801461.823000.319903.191802.33100K562U2AF2
CA8ENSG00000178538.52382.160301524.102200.6442017.6274015.98540K562UPF1
CA8ENSG00000178538.51915.763101304.121300.554707.794206.27920K562WDR3
CA8ENSG00000178538.51675.650901356.167700.305104.378103.33130K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CA8 is not available on ENCORE database.





12 RBPs can affect the splicing of CA8 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECA8ENSG00000178538.5chr8-611448426114493861139431611394946117848361178608-0.108000.001150.02356excludedK562SF3B4
SECA8ENSG00000178538.5chr8-611348666113491661120629611214786113520761135320-0.071000.003420.07926excludedK562AKAP8L
SECA8ENSG00000178538.5chr8-6113486661134916611206296112147861135207611353200.072000.001390.05100includedK562FXR1
SECA8ENSG00000178538.5chr8-6113486661134916611206296112147861135207611353200.103000.000500.04325includedK562SUPV3L1
SECA8ENSG00000178538.5chr8-611448426114493861139431611394946117848361178608-0.141000.000000.00011excludedK562PUS1
SECA8ENSG00000178538.5chr8-611448426114493861139431611394946117848361178608-0.142000.000110.02874excludedK562LARP4
SECA8ENSG00000178538.5chr8-611448426114493861139431611394946117848361178608-0.217000.000000.00013excludedK562U2AF1
SECA8ENSG00000178538.5chr8-611348666113491661120629611214786113520761135320-0.072000.001520.04675excludedK562UTP18
SECA8ENSG00000178538.5chr8-6113486661134916611213086112147861135207611353200.060000.001200.04326includedK562HNRNPU
SECA8ENSG00000178538.5chr8-611448426114493861139431611394946117848361178608-0.085000.004480.08406excludedK562RBM15
SECA8ENSG00000178538.5chr8-611348666113491661120629611214786113520761135320-0.084000.000080.00349excludedK562AGGF1
SECA8ENSG00000178538.5chr8-6113486661134916611206296112147861135207611353200.155000.002550.04130includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CA8 is not avaliable on ENCORE database.