DSCR3

General Information

Gene Name       : DSCR3
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DSCR3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DSCR3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DSCR3 RNA is bound by 20 proteins.  







eCLIP assay for DSCR3 is not avaliable on ENCORE database.





20 proteins are bound to DSCR3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr213859733638597348-3'-UTR,intron-Distal5.2880310.07425K562YBX3
chr213859632238596385-3'-UTR,intron-Distal5.067927.21253K562UPF1
chr213859574938595799-3'-UTR,intron-Distal4.349608.68778K562PUM2
chr213859641238596471-3'-UTR,intron-Distal4.103116.74636K562UPF1
chr213859623238596256-3'-UTR,intron-Distal3.239893.06830K562UPF1
chr213859654038596585-3'-UTR,intron-Distal3.201494.26467K562UPF1
chr213861284338612943-3'-UTR,CDS,intron-Distal,intron-Proximal3.229696.60215K562DDX3X
chr213859610038596162-3'-UTR,intron-Distal3.533834.14964K562UPF1
chr213859734838597368-3'-UTR,intron-Distal5.3639210.72574K562YBX3
chr213859647138596537-3'-UTR,intron-Distal3.134446.65594K562UPF1
chr213863955738639643-5'-UTR,CDS,intron-Distal,intron-Proximal3.875657.76798K562DDX3X
chr213860467738604742-CDS,intron-Distal,intron-Proximal3.946128.04154K562YBX3
chr213859995438599997-CDS,intron-Distal,intron-Proximal3.450985.37252K562YBX3
chr213861075938610784-CDS,intron-Distal,intron-Proximal4.364344.55095K562YBX3
chr213861071138610783-CDS,intron-Distal,intron-Proximal3.772484.75655HepG2PRPF8
chr213860572338605770-CDS,intron-Distal,intron-Proximal3.977615.99890HepG2U2AF2
chr213860061938600678-CDS,intron-Distal,intron-Proximal3.813403.25055K562U2AF2
chr213860472538604821-CDS,intron-Distal,intron-Proximal4.304734.08582K562SMNDC1
chr213860474238604753-CDS,intron-Distal,intron-Proximal3.416624.93097K562YBX3
chr213860560838605681-CDS,intron-Distal,intron-Proximal5.429357.23718K562AQR
chr213860051538600689-CDS,intron-Distal,intron-Proximal3.266593.63043HepG2GRWD1
chr213861062038610786-CDS,intron-Distal,intron-Proximal3.008704.72953K562PRPF8
chr213860556538605692-CDS,intron-Distal,intron-Proximal4.068363.18234K562BUD13
chr213860051838600648-CDS,intron-Distal,intron-Proximal3.584684.52024HepG2PPIG
chr213862999838630090-intron-Distal4.415203.60414HepG2DDX59
chr213863896338639092-intron-Distal,intron-Proximal4.546054.51735HepG2QKI
chr213861515238615281-intron-Distal3.881263.02234K562KHSRP
chr213863943738639509-intron-Distal,intron-Proximal3.402214.70430K562CSTF2T
chr213863939638639524-intron-Distal,intron-Proximal4.025448.17769HepG2PRPF4
chr213861052938610680-intron-Distal,intron-Proximal3.6381711.77432K562KHSRP
chr213861270238612757-intron-Distal,intron-Proximal4.073683.02181K562PRPF8
chr213861630438616464-intron-Distal4.611195.31505K562HNRNPM
chr213860579638605874-intron-Distal,intron-Proximal3.774565.14864K562KHSRP
chr213861812338618205-intron-Distal3.917073.47525K562MATR3
chr213863940238639511-intron-Distal,intron-Proximal3.974413.69819HepG2CSTF2T
chr213863897238639086-intron-Distal,intron-Proximal3.123435.08881K562QKI
chr213863943138639509-intron-Distal,intron-Proximal3.814115.42009HepG2EFTUD2
chr213862997938630109-intron-Distal3.864125.38800HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DSCR3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DSCR3 is not available on ENCORE database.

  • 41 RBPs can affect the levels of DSCR3.  








The Knockdown/knockout RNA-Seq assay for DSCR3 is not available on ENCORE database.





41 RBPs can affect the gene expression of DSCR3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DSCR3ENSG00000157538.91046.25450813.340200.363204.393203.66140HepG2ACO1
DSCR3ENSG00000157538.91657.158101166.404700.506503.834003.22250HepG2AKAP1
DSCR3ENSG00000157538.91363.784701153.394000.241602.193601.56950HepG2AUH
DSCR3ENSG00000157538.9856.14080583.828600.552204.909804.14200HepG2BOP1
DSCR3ENSG00000157538.91251.38850916.909300.448603.542702.67510HepG2CIRBP
DSCR3ENSG00000157538.9961.43980813.087100.241702.237901.63010HepG2CKAP4
DSCR3ENSG00000157538.9290.64980481.83320-0.729305.950504.46560HepG2CSTF2
DSCR3ENSG00000157538.9446.02230695.70580-0.641406.463505.07240HepG2DDX24
DSCR3ENSG00000157538.91469.792201117.313800.395502.828602.19650HepG2DDX3X
DSCR3ENSG00000157538.9526.60770767.03990-0.542603.673102.79600HepG2DDX55
DSCR3ENSG00000157538.91391.06070959.827800.535204.197703.44870HepG2DDX6
DSCR3ENSG00000157538.91339.768201019.647700.393802.520301.90930HepG2EIF4A3
DSCR3ENSG00000157538.9696.51390992.79950-0.511402.934502.22730HepG2EIF4B
DSCR3ENSG00000157538.9581.901101093.62010-0.9103012.3550010.71240HepG2EIF4G2
DSCR3ENSG00000157538.9840.04460607.554000.467402.992102.32980HepG2GPKOW
DSCR3ENSG00000157538.9832.593601063.48550-0.353103.528602.49160HepG2HNRNPA2B1
DSCR3ENSG00000157538.9864.896001054.06850-0.285403.087902.37870HepG2HNRNPL
DSCR3ENSG00000157538.9556.81840769.82530-0.467305.321804.50250HepG2HNRNPU
DSCR3ENSG00000157538.91329.95950970.082100.455103.676602.90690HepG2IGF2BP2
DSCR3ENSG00000157538.9600.85590836.51620-0.477402.460501.47920HepG2PCBP2
DSCR3ENSG00000157538.9921.61520733.731200.328803.179802.35590HepG2PRPF4
DSCR3ENSG00000157538.9999.919301162.77190-0.217702.105401.57430HepG2PUM1
DSCR3ENSG00000157538.91317.27510807.207600.706404.133303.28010HepG2RAVER1
DSCR3ENSG00000157538.9631.57680796.95400-0.335502.116901.41170HepG2RPS2
DSCR3ENSG00000157538.9765.187001040.13220-0.442902.484401.72480HepG2RPS3A
DSCR3ENSG00000157538.9835.32090585.230800.513203.222602.38330HepG2RRP9
DSCR3ENSG00000157538.91314.57990930.244200.498803.222702.49400HepG2SF3A3
DSCR3ENSG00000157538.9774.95080573.877600.433303.038802.30000HepG2SF3B1
DSCR3ENSG00000157538.92095.224401250.131700.7449022.1094021.04660HepG2SRFBP1
DSCR3ENSG00000157538.91060.95040881.535400.267202.540502.00650HepG2SRSF9
DSCR3ENSG00000157538.9422.11940565.18050-0.421102.505901.81110HepG2TARDBP
DSCR3ENSG00000157538.9900.11600724.089800.313803.204902.49110HepG2ZC3H8
DSCR3ENSG00000157538.91479.257001920.96180-0.377003.785502.30150K562APOBEC3C
DSCR3ENSG00000157538.93311.122001780.597400.8949016.9951015.70320K562AQR
DSCR3ENSG00000157538.91074.69690726.393400.565005.160503.95900K562BOP1
DSCR3ENSG00000157538.91459.52160941.884600.631803.677002.42080K562CNOT7
DSCR3ENSG00000157538.9993.43740772.370700.363002.981002.16700K562CPSF6
DSCR3ENSG00000157538.91349.69600978.550700.463803.301402.16490K562EIF3D
DSCR3ENSG00000157538.91052.77360785.857000.421803.336702.39180K562FMR1
DSCR3ENSG00000157538.91063.91870737.428900.528705.179404.09930K562GPKOW
DSCR3ENSG00000157538.91503.364201807.59460-0.265902.141601.47100K562GRSF1
DSCR3ENSG00000157538.91423.99400904.882000.654003.888002.40120K562PABPC1
DSCR3ENSG00000157538.9849.670501138.00580-0.421503.719902.58700K562PCBP2
DSCR3ENSG00000157538.91670.694101359.546400.297203.386202.48870K562SF3A3
DSCR3ENSG00000157538.91209.407601460.91540-0.272603.039502.28740K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DSCR3 is not available on ENCORE database.





15 RBPs can affect the splicing of DSCR3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDSCR3ENSG00000157538.9chr21-386127963861294038604677386047523863953838639623-0.332000.000000.00003excludedK562SF3B4
SEDSCR3ENSG00000157538.9chr21-3859842238598486385975553859792738599954386001070.071000.002910.08175includedK562PRPF8
SEDSCR3ENSG00000157538.9chr21-386127963861294038604677386047523863953838639623-0.276000.000030.00210excludedK562PRPF8
SEDSCR3ENSG00000157538.9chr21-386056623860574338604677386047523861076038610910-0.181000.000000.00009excludedK562AKAP8L
SEDSCR3ENSG00000157538.9chr21-386056623860574338604677386047523863953838640220-0.254000.000000.00000excludedK562AQR
SEDSCR3ENSG00000157538.9chr21-3863401238634238386127963861294038639538386396410.071000.001450.05277includedK562FXR1
SEDSCR3ENSG00000157538.9chr21-3860566238605743386046773860475238610760386109100.128000.002450.07749includedK562FXR1
SEDSCR3ENSG00000157538.9chr21-386056623860574338604677386047523861076038610910-0.280000.000000.00000excludedK562PUS1
SEDSCR3ENSG00000157538.9chr21-386056623860574338604677386047523861076038610910-0.233000.000050.00195excludedK562U2AF1
SEDSCR3ENSG00000157538.9chr21-386127963861294038604677386047523863953838639623-0.270000.000010.00082excludedHepG2SF3A3
SEDSCR3ENSG00000157538.9chr21-3860566238605743386046773860475238610760386109100.209000.001370.08177includedHepG2IGF2BP3
SEDSCR3ENSG00000157538.9chr21-3863401238634238386127963861294038639538386396410.117000.000560.03068includedHepG2PCBP1
SEDSCR3ENSG00000157538.9chr21-386046773860475238600523386006743863953838639652-0.087000.000050.00345excludedK562UTP18
SEDSCR3ENSG00000157538.9chr21-386056623860574338604677386047523861076038610910-0.288000.000000.00000excludedK562HNRNPU
SEDSCR3ENSG00000157538.9chr21-386046773860475238600523386006743863953838639652-0.054000.001080.02889excludedK562RBM15
SEDSCR3ENSG00000157538.9chr21-386056623860574338604677386047523861076038610910-0.205000.000000.00001excludedK562AGGF1
SEDSCR3ENSG00000157538.9chr21-386056623860574338604677386047523861076038610910-0.133000.002390.08607excludedK562HNRNPK
A3SSDSCR3ENSG00000157538.9chr21-3859995438600150385999543860010738600523386007330.063000.000690.00498longerK562AQR
A3SSDSCR3ENSG00000157538.9chr21-3860467738604946386046773860475238605662386057430.111000.000000.00000longerK562AQR
MXEDSCR3ENSG00000157538.9chr21-38605662386057433861076038610910386046773860475238612796386129400.193000.000030.001171includedK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DSCR3 is not avaliable on ENCORE database.