The Knockdown/knockout RNA-Seq assay for PAPD4 is not available on ENCORE database.
58 RBPs can affect the gene expression of PAPD4 :
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
PAPD4 | ENSG00000164329.9 | 799.47570 | 1328.25750 | -0.73240 | 6.76740 | 5.97640 | HepG2 | AKAP1 | |
PAPD4 | ENSG00000164329.9 | 783.72930 | 947.80430 | -0.27420 | 2.39920 | 1.67920 | HepG2 | AKAP8L | |
PAPD4 | ENSG00000164329.9 | 861.65140 | 1373.32810 | -0.67250 | 16.40830 | 14.86410 | HepG2 | DAZAP1 | |
PAPD4 | ENSG00000164329.9 | 627.94490 | 1272.44240 | -1.01890 | 13.55860 | 12.27560 | HepG2 | DDX3X | |
PAPD4 | ENSG00000164329.9 | 846.45190 | 1082.35580 | -0.35470 | 2.50540 | 1.53890 | HepG2 | DDX5 | |
PAPD4 | ENSG00000164329.9 | 642.69260 | 871.96320 | -0.44010 | 4.61020 | 3.72150 | HepG2 | DNAJC21 | |
PAPD4 | ENSG00000164329.9 | 893.18530 | 669.26710 | 0.41630 | 2.68380 | 1.79320 | HepG2 | EIF3D | |
PAPD4 | ENSG00000164329.9 | 597.88850 | 1130.55460 | -0.91910 | 8.16150 | 7.00990 | HepG2 | EIF4B | |
PAPD4 | ENSG00000164329.9 | 786.67200 | 1091.10660 | -0.47200 | 3.16620 | 2.34900 | HepG2 | FIP1L1 | |
PAPD4 | ENSG00000164329.9 | 873.77500 | 679.34370 | 0.36300 | 2.71670 | 1.93740 | HepG2 | FUBP3 | |
PAPD4 | ENSG00000164329.9 | 737.88780 | 965.65270 | -0.38810 | 2.30100 | 1.37610 | HepG2 | GNB2L1 | |
PAPD4 | ENSG00000164329.9 | 1521.02630 | 1262.06360 | 0.26920 | 2.70720 | 1.78000 | HepG2 | HNRNPA2B1 | |
PAPD4 | ENSG00000164329.9 | 697.39890 | 979.17790 | -0.48960 | 4.24770 | 3.40180 | HepG2 | HNRNPC | |
PAPD4 | ENSG00000164329.9 | 876.79600 | 1251.03720 | -0.51280 | 9.71720 | 8.53000 | HepG2 | HNRNPL | |
PAPD4 | ENSG00000164329.9 | 727.22820 | 972.70500 | -0.41960 | 5.16520 | 4.35720 | HepG2 | HNRNPU | |
PAPD4 | ENSG00000164329.9 | 545.90130 | 1178.48570 | -1.11020 | 14.20170 | 12.85200 | HepG2 | MATR3 | |
PAPD4 | ENSG00000164329.9 | 560.45680 | 1206.27830 | -1.10590 | 15.18910 | 13.78580 | HepG2 | NCBP2 | |
PAPD4 | ENSG00000164329.9 | 1481.73070 | 1067.34160 | 0.47320 | 2.65380 | 1.63620 | HepG2 | PCBP2 | |
PAPD4 | ENSG00000164329.9 | 776.03240 | 598.08440 | 0.37570 | 2.47810 | 1.71170 | HepG2 | PRPF8 | |
PAPD4 | ENSG00000164329.9 | 714.86150 | 1299.90330 | -0.86270 | 14.06170 | 12.85780 | HepG2 | PUF60 | |
PAPD4 | ENSG00000164329.9 | 1086.62000 | 1402.20970 | -0.36790 | 4.19610 | 3.59230 | HepG2 | RBM22 | |
PAPD4 | ENSG00000164329.9 | 1675.64370 | 1060.66570 | 0.65960 | 9.87730 | 8.66000 | HepG2 | RBM25 | |
PAPD4 | ENSG00000164329.9 | 1573.63570 | 1161.70230 | 0.43780 | 2.65140 | 1.99160 | HepG2 | SF3A3 | |
PAPD4 | ENSG00000164329.9 | 1089.45270 | 1246.31550 | -0.19410 | 1.93660 | 1.33100 | HepG2 | SLBP | |
PAPD4 | ENSG00000164329.9 | 850.24810 | 1010.19770 | -0.24870 | 2.51460 | 1.89700 | HepG2 | SMN1 | |
PAPD4 | ENSG00000164329.9 | 1675.95160 | 1172.67560 | 0.51510 | 9.54860 | 8.78940 | HepG2 | SRSF1 | |
PAPD4 | ENSG00000164329.9 | 1044.40240 | 1283.41310 | -0.29730 | 3.38820 | 2.70780 | HepG2 | SRSF5 | |
PAPD4 | ENSG00000164329.9 | 491.61020 | 728.78070 | -0.56800 | 3.44260 | 2.07120 | HepG2 | STAU1 | |
PAPD4 | ENSG00000164329.9 | 1276.89290 | 1459.63880 | -0.19300 | 2.03680 | 1.48730 | HepG2 | SUCLG1 | |
PAPD4 | ENSG00000164329.9 | 1218.72780 | 968.52430 | 0.33140 | 2.90680 | 2.05270 | HepG2 | TIA1 | |
PAPD4 | ENSG00000164329.9 | 812.14900 | 953.61100 | -0.23170 | 1.85270 | 1.37330 | HepG2 | TRIM56 | |
PAPD4 | ENSG00000164329.9 | 599.45370 | 1087.36310 | -0.85910 | 2.34840 | 1.44780 | HepG2 | U2AF2 | |
PAPD4 | ENSG00000164329.9 | 826.57630 | 1030.24900 | -0.31780 | 3.40880 | 2.64740 | HepG2 | UPF1 | |
PAPD4 | ENSG00000164329.9 | 786.98940 | 994.67000 | -0.33790 | 3.36820 | 2.71970 | HepG2 | UTP3 | |
PAPD4 | ENSG00000164329.9 | 1339.42970 | 1133.08140 | 0.24130 | 2.82220 | 2.27150 | HepG2 | ZNF622 | |
PAPD4 | ENSG00000164329.9 | 2820.13790 | 2453.92050 | 0.20060 | 2.45870 | 1.91810 | K562 | AGGF1 | |
PAPD4 | ENSG00000164329.9 | 2647.12540 | 3231.78270 | -0.28790 | 2.65170 | 1.43870 | K562 | APOBEC3C | |
PAPD4 | ENSG00000164329.9 | 1533.08300 | 1825.89880 | -0.25220 | 2.56450 | 1.31620 | K562 | BCCIP | |
PAPD4 | ENSG00000164329.9 | 2392.72190 | 2854.96010 | -0.25480 | 3.13690 | 1.95230 | K562 | CPEB4 | |
PAPD4 | ENSG00000164329.9 | 1660.10830 | 2004.77900 | -0.27220 | 2.43640 | 1.69640 | K562 | CPSF6 | |
PAPD4 | ENSG00000164329.9 | 1056.39150 | 1672.13190 | -0.66250 | 10.14800 | 8.02040 | K562 | DDX3X | |
PAPD4 | ENSG00000164329.9 | 3291.61390 | 2747.62010 | 0.26050 | 3.37750 | 2.39710 | K562 | DKC1 | |
PAPD4 | ENSG00000164329.9 | 1647.51540 | 2057.96580 | -0.32090 | 4.02900 | 3.18510 | K562 | EIF2S2 | |
PAPD4 | ENSG00000164329.9 | 966.51220 | 1573.31980 | -0.70300 | 13.27830 | 10.69620 | K562 | EIF4B | |
PAPD4 | ENSG00000164329.9 | 1419.21530 | 2142.26400 | -0.59400 | 7.73700 | 6.24860 | K562 | FIP1L1 | |
PAPD4 | ENSG00000164329.9 | 1365.48700 | 2039.98310 | -0.57910 | 6.82950 | 5.46260 | K562 | FMR1 | |
PAPD4 | ENSG00000164329.9 | 2685.22360 | 1972.72540 | 0.44480 | 2.98080 | 2.24320 | K562 | G3BP2 | |
PAPD4 | ENSG00000164329.9 | 2077.00620 | 2742.53480 | -0.40100 | 4.66670 | 3.68610 | K562 | GRSF1 | |
PAPD4 | ENSG00000164329.9 | 885.32080 | 1715.84750 | -0.95460 | 18.71500 | 17.24000 | K562 | HNRNPC | |
PAPD4 | ENSG00000164329.9 | 1182.67560 | 1532.14740 | -0.37350 | 3.29900 | 2.04300 | K562 | HNRNPF | |
PAPD4 | ENSG00000164329.9 | 1577.61430 | 2669.74760 | -0.75900 | 14.45370 | 11.93490 | K562 | HNRNPL | |
PAPD4 | ENSG00000164329.9 | 1482.23970 | 2257.40460 | -0.60690 | 11.88910 | 10.06020 | K562 | HNRNPU | |
PAPD4 | ENSG00000164329.9 | 1622.84010 | 2260.21750 | -0.47790 | 4.15750 | 1.78930 | K562 | KHSRP | |
PAPD4 | ENSG00000164329.9 | 827.75450 | 1634.50030 | -0.98160 | 11.02150 | 9.03530 | K562 | KRR1 | |
PAPD4 | ENSG00000164329.9 | 1210.07380 | 2344.21230 | -0.95400 | 21.75280 | 19.16680 | K562 | MATR3 | |
PAPD4 | ENSG00000164329.9 | 1753.74630 | 2185.92190 | -0.31780 | 4.79730 | 3.75590 | K562 | MTPAP | |
PAPD4 | ENSG00000164329.9 | 1052.31570 | 1744.43320 | -0.72920 | 12.98600 | 10.44640 | K562 | NCBP2 | |
PAPD4 | ENSG00000164329.9 | 2119.11800 | 2428.80260 | -0.19680 | 3.00170 | 2.22840 | K562 | NSUN2 | |
PAPD4 | ENSG00000164329.9 | 1520.08810 | 2282.03270 | -0.58620 | 9.34160 | 8.17050 | K562 | PTBP1 | |
PAPD4 | ENSG00000164329.9 | 3004.84750 | 3996.11200 | -0.41130 | 4.38730 | 3.36600 | K562 | PUF60 | |
PAPD4 | ENSG00000164329.9 | 1469.81380 | 2188.55540 | -0.57430 | 7.34360 | 5.88830 | K562 | RBM22 | |
PAPD4 | ENSG00000164329.9 | 2312.19360 | 1871.41740 | 0.30500 | 2.80190 | 1.46470 | K562 | RBM25 | |
PAPD4 | ENSG00000164329.9 | 1826.50400 | 2303.02060 | -0.33440 | 2.62960 | 1.56690 | K562 | NELFE | |
PAPD4 | ENSG00000164329.9 | 1676.38730 | 2051.55070 | -0.29140 | 2.85000 | 1.98240 | K562 | SF3B4 | |
PAPD4 | ENSG00000164329.9 | 790.73720 | 1330.45210 | -0.75060 | 10.17910 | 7.86000 | K562 | SRFBP1 | |
PAPD4 | ENSG00000164329.9 | 2098.21890 | 2455.29890 | -0.22670 | 3.23470 | 2.23040 | K562 | SRPK2 | |
PAPD4 | ENSG00000164329.9 | 1544.42420 | 2570.85470 | -0.73520 | 9.83410 | 7.41450 | K562 | STAU1 | |
PAPD4 | ENSG00000164329.9 | 1157.83410 | 2264.22880 | -0.96760 | 17.28560 | 15.21190 | K562 | TARDBP | |
PAPD4 | ENSG00000164329.9 | 1628.02420 | 2184.06270 | -0.42390 | 5.26940 | 4.08820 | K562 | TIA1 | |
PAPD4 | ENSG00000164329.9 | 2252.10690 | 2575.30720 | -0.19350 | 2.29940 | 1.64060 | K562 | UPF1 | |
PAPD4 | ENSG00000164329.9 | 2451.61810 | 3306.41390 | -0.43150 | 5.48630 | 3.66870 | K562 | WRN | |
PAPD4 | ENSG00000164329.9 | 2582.27410 | 3143.80870 | -0.28390 | 2.47370 | 1.66580 | K562 | ZC3H8 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for PAPD4 is not available on ENCORE database.
18 RBPs can affect the splicing of PAPD4 :
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78913352 | 78913422 | | | 78908833 | 78908898 | 78915434 | 78915587 | 0.28300 | 0.00000 | 0.00000 | included | K562 | MATR3 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78915816 | 78915906 | | | 78915434 | 78915608 | 78919074 | 78919132 | -0.07000 | 0.00059 | 0.01305 | excluded | HepG2 | U2AF1 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78944439 | 78944516 | | | 78940945 | 78941015 | 78944884 | 78945013 | -0.10900 | 0.00003 | 0.00093 | excluded | HepG2 | U2AF1 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78938666 | 78938733 | | | 78936927 | 78937019 | 78940945 | 78941015 | -0.27900 | 0.00575 | 0.08441 | excluded | HepG2 | U2AF1 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78910294 | 78910383 | | | 78908833 | 78908898 | 78915434 | 78915608 | 0.14600 | 0.00005 | 0.00897 | included | HepG2 | DDX59 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78915816 | 78915906 | | | 78915434 | 78915608 | 78919074 | 78919132 | -0.11100 | 0.00001 | 0.00021 | excluded | HepG2 | U2AF2 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78944439 | 78944516 | | | 78940945 | 78941015 | 78944884 | 78945013 | -0.19900 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF2 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78937277 | 78937340 | | | 78936927 | 78937019 | 78938666 | 78938733 | 0.06100 | 0.00662 | 0.05850 | included | K562 | AQR | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78941965 | 78942056 | | | 78940945 | 78941015 | 78944439 | 78944516 | 0.06100 | 0.00012 | 0.00193 | included | K562 | AQR | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78938654 | 78938808 | | | 78936927 | 78937019 | 78940945 | 78941015 | -0.08500 | 0.00497 | 0.04630 | excluded | K562 | AQR | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78952780 | 78952824 | | | 78944884 | 78945013 | 78964714 | 78964851 | -0.19100 | 0.00000 | 0.00000 | excluded | K562 | AQR | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78975401 | 78975601 | | | 78964714 | 78964851 | 78977804 | 78977884 | -0.05500 | 0.00594 | 0.05354 | excluded | K562 | AQR | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78919074 | 78919312 | | | 78915816 | 78915906 | 78936673 | 78936788 | -0.08000 | 0.00000 | 0.00006 | excluded | K562 | AQR | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78944378 | 78944516 | | | 78940945 | 78941015 | 78944884 | 78944962 | -0.06700 | 0.00040 | 0.00557 | excluded | K562 | AQR | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78913352 | 78913422 | | | 78908833 | 78908898 | 78915434 | 78915608 | 0.12100 | 0.00006 | 0.00436 | included | K562 | FXR1 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78915434 | 78915608 | | | 78908242 | 78908898 | 78919074 | 78919312 | -0.11500 | 0.00013 | 0.00310 | excluded | K562 | PUS1 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78952780 | 78952824 | | | 78944884 | 78945013 | 78964714 | 78964851 | -0.24800 | 0.00004 | 0.00551 | excluded | HepG2 | NCBP2 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78913352 | 78913422 | | | 78908833 | 78908898 | 78915434 | 78915608 | 0.09900 | 0.00000 | 0.00334 | included | K562 | APOBEC3C | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78913352 | 78913422 | | | 78908833 | 78908898 | 78915434 | 78915608 | 0.22500 | 0.00014 | 0.00903 | included | HepG2 | MATR3 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78938654 | 78938733 | | | 78936927 | 78937019 | 78940945 | 78941015 | -0.05300 | 0.00116 | 0.02544 | excluded | K562 | U2AF1 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78919074 | 78919312 | | | 78908257 | 78908898 | 78936673 | 78936788 | -0.11600 | 0.00126 | 0.04065 | excluded | K562 | UTP18 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78915816 | 78915906 | | | 78915434 | 78915608 | 78919074 | 78919312 | -0.12700 | 0.00000 | 0.00000 | excluded | K562 | U2AF2 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78944439 | 78944516 | | | 78940945 | 78941015 | 78944884 | 78945013 | -0.10300 | 0.00000 | 0.00004 | excluded | K562 | U2AF2 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78938654 | 78938733 | | | 78936927 | 78937019 | 78940945 | 78941015 | -0.07600 | 0.00008 | 0.00241 | excluded | K562 | U2AF2 | |
SE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78941965 | 78942056 | | | 78940945 | 78941015 | 78944439 | 78944516 | 0.06700 | 0.00157 | 0.06254 | included | K562 | HNRNPK | |
A3SS | PAPD4 | ENSG00000164329.9 | chr5 | + | 78938654 | 78938808 | | | 78938666 | 78938808 | 78936927 | 78937019 | 0.17300 | 0.00211 | 0.01353 | longer | K562 | AQR | |
A3SS | PAPD4 | ENSG00000164329.9 | chr5 | + | 78944866 | 78945013 | | | 78944884 | 78945013 | 78944439 | 78944516 | 0.05900 | 0.00000 | 0.00001 | longer | K562 | AQR | |
A5SS | PAPD4 | ENSG00000164329.9 | chr5 | + | 78908440 | 78908673 | | | 78908440 | 78908558 | 78908833 | 78908898 | 0.26300 | 0.00003 | 0.00920 | longer | K562 | TARDBP | |
A5SS | PAPD4 | ENSG00000164329.9 | chr5 | + | 78938654 | 78938808 | | | 78938654 | 78938733 | 78940945 | 78941015 | 0.14000 | 0.00003 | 0.00578 | longer | K562 | PRPF8 | |
A5SS | PAPD4 | ENSG00000164329.9 | chr5 | + | 78938654 | 78938808 | | | 78938654 | 78938733 | 78940945 | 78941015 | 0.12000 | 0.00010 | 0.01570 | longer | K562 | EFTUD2 | |
A5SS | PAPD4 | ENSG00000164329.9 | chr5 | + | 78908440 | 78908673 | | | 78908440 | 78908558 | 78908833 | 78908898 | 0.28400 | 0.00000 | 0.00113 | longer | K562 | IGF2BP2 | |
A5SS | PAPD4 | ENSG00000164329.9 | chr5 | + | 78908440 | 78908638 | | | 78908440 | 78908558 | 78908833 | 78908898 | 0.22200 | 0.00208 | 0.09301 | longer | K562 | SRSF1 | |
MXE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78908833 | 78908898 | 78913352 | 78913422 | 78908440 | 78908558 | 78915434 | 78915608 | -0.18300 | 0.00001 | 0.00358 | 2included | K562 | MATR3 | |
MXE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78915816 | 78915906 | 78919074 | 78919178 | 78915434 | 78915608 | 78936673 | 78936788 | -0.09500 | 0.00110 | 0.02307 | 2included | HepG2 | U2AF1 | |
MXE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78941965 | 78942056 | 78944378 | 78944516 | 78940945 | 78941015 | 78952780 | 78952824 | 0.61100 | 0.00704 | 0.04771 | 1included | K562 | AQR | |
MXE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78941965 | 78942056 | 78944439 | 78944516 | 78940945 | 78941015 | 78952780 | 78952824 | 0.06200 | 0.00103 | 0.00940 | 1included | K562 | AQR | |
MXE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78944439 | 78944516 | 78944884 | 78944962 | 78940945 | 78941015 | 78952780 | 78952824 | -0.06500 | 0.00046 | 0.00464 | 2included | K562 | AQR | |
MXE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78915816 | 78915906 | 78919074 | 78919178 | 78915434 | 78915608 | 78936673 | 78936788 | -0.16400 | 0.00000 | 0.00000 | 2included | K562 | U2AF2 | |
MXE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78910294 | 78910383 | 78913352 | 78913422 | 78908833 | 78908898 | 78915434 | 78915608 | 0.47200 | 0.00243 | 0.04071 | 1included | K562 | HNRNPC | |
MXE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78915816 | 78915906 | 78919074 | 78919178 | 78915434 | 78915608 | 78936673 | 78936788 | -0.05100 | 0.00449 | 0.05994 | 2included | K562 | SF3B4 | |
MXE | PAPD4 | ENSG00000164329.9 | chr5 | + | 78910294 | 78910383 | 78913352 | 78913422 | 78908833 | 78908898 | 78915434 | 78915608 | -0.26900 | 0.00793 | 0.09362 | 2included | K562 | SF3B4 | |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for PAPD4 is not avaliable on ENCORE database.