UBE2F-SCLY

General Information

Gene Name       : UBE2F-SCLY
Gene ID             : ENSG00000258984.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: UBE2F-SCLY)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878UBE2F-SCLYENSG00000258984.50.000.000.00ENCSR000AEF
HepG2UBE2F-SCLYENSG00000258984.50.280.210.24ENCSR985KAT
K562UBE2F-SCLYENSG00000258984.50.340.100.22ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for UBE2F-SCLY is not avaliable on ENCORE database.



Proteins bound to RNA

  • UBE2F-SCLY RNA is bound by 25 proteins.  







eCLIP assay for UBE2F-SCLY is not avaliable on ENCORE database.





25 proteins are bound to UBE2F-SCLY RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2238990337238990400+3'-UTR,CDS,intron-Distal,intron-Proximal3.816855.55825HepG2U2AF2
chr2238976714238976825+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.215075.91405HepG2BCLAF1
chr2238999836238999915+3'-UTR,CDS,intron-Distal,intron-Proximal3.354957.61543HepG2U2AF2
chr2238990630238990704+3'-UTR,CDS,intron-Distal,intron-Proximal3.863374.36528HepG2U2AF2
chr2238976705238976813+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.208264.05271HepG2PPIG
chr2239002581239002638+3'-UTR,CDS,intron-Distal,intron-Proximal4.715045.32906HepG2AQR
chr2238990792238990878+3'-UTR,CDS,intron-Distal,intron-Proximal3.435966.20926HepG2PPIG
chr2238944523238944597+3'-UTR,CDS,intron-Distal,intron-Proximal4.199873.96990K562BUD13
chr2239003133239003175+3'-UTR,CDS,intron-Proximal3.573673.64266HepG2PPIG
chr2239002581239002641+3'-UTR,CDS,intron-Distal,intron-Proximal3.204034.97939HepG2PRPF8
chr2238944531238944582+3'-UTR,CDS,intron-Distal,intron-Proximal3.603925.73766K562YBX3
chr2239005441239005459+3'-UTR,CDS,intron-Proximal3.313733.59112HepG2PPIG
chr2238990450238990475+3'-UTR,CDS,intron-Distal4.223454.08604HepG2PPIG
chr2239002486239002652+3'-UTR,CDS,intron-Distal,intron-Proximal3.698608.74772HepG2PPIG
chr2238973001238973127+3'-UTR,5'-UTR,CDS,intron-Proximal5.093117.39496HepG2BCLAF1
chr2238990717238990772+3'-UTR,CDS,intron-Distal3.244714.38582HepG2SRSF1
chr2238991884238991933+3'-UTR,CDS,intron-Distal,intron-Proximal,polyA_site4.363373.79000HepG2U2AF2
chr2239003137239003216+3'-UTR,CDS,intron-Proximal3.8884016.24651HepG2PRPF8
chr2238999850238999973+3'-UTR,CDS,intron-Distal,intron-Proximal4.623634.09264K562AQR
chr2238973054238973108+3'-UTR,5'-UTR,CDS4.245647.49899HepG2PPIG
chr2238978116238978163+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.204035.73990HepG2PRPF8
chr2238990712238990787+3'-UTR,CDS,intron-Distal3.535265.58370HepG2PPIG
chr2238875730238875776+5'-UTR,CDS,intron-Proximal4.502046.48236HepG2DDX3X
chr2238940872238940996+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.5736810.39215K562PRPF8
chr2238875673238875725+5'-UTR4.018777.37356K562DDX3X
chr2238939228238939294+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.567486.69228HepG2PRPF8
chr2238940858238940924+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal6.322177.02967HepG2PRPF8
chr2238875656238875730+5'-UTR,CDS6.0765311.78230HepG2DDX3X
chr2238875666238875776+5'-UTR,CDS,intron-Proximal4.0995612.08332HepG2NCBP2
chr2238875725238875775+5'-UTR,CDS,intron-Proximal4.4024423.68464K562DDX3X
chr2238881733238881765+5'-UTR,CDS,intron-Distal,intron-Proximal4.2033810.73364K562DDX3X
chr2238903389238903425+5'-UTR,CDS,intron-Distal3.248026.20049K562YBX3
chr2238949928238949958+3'-UTR,CDS,intron-Distal,intron-Proximal3.180534.11795K562YBX3
chr2238903425238903451+5'-UTR,CDS,intron-Distal3.734509.25117K562YBX3
chr2238892686238892797+intron-Distal3.704833.06084HepG2HNRNPK
chr2238909089238909154+intron-Distal3.696296.59336K562KHSRP
chr2238995190238995276+intron-Distal3.928535.84561HepG2HLTF
chr2238939261238939328+intron-Distal,intron-Proximal4.895794.65563K562AQR
chr2238969666238969781+5'-UTR,CDS,intron-Distal5.6224827.14411HepG2NCBP2
chr2239002680239002724+intron-Distal,intron-Proximal3.738635.34337K562AQR
chr2238980953238981010+intron-Distal4.127163.62366HepG2HNRNPM
chr2238993972238994098+intron-Distal3.904213.43228K562SAFB2
chr2238880608238880717+intron-Distal4.402215.62460K562CSTF2T
chr2238950464238950589+3'-UTR,intron-Distal,polyA_site4.231485.02888K562KHSRP
chr2238887326238887394+intron-Distal4.247673.97018HepG2HNRNPM
chr2239001983239002061+intron-Distal4.594784.83379HepG2HNRNPK
chr2238995193238995266+intron-Distal3.276384.34612K562SAFB2
chr2238981106238981182+intron-Distal4.145233.27829HepG2MATR3
chr2238988995238989032+intron-Distal3.885023.63454HepG2SUGP2
chr2238950197238950275+3'-UTR,intron-Distal3.770073.02234K562KHSRP
chr2238995819238995875+intron-Distal3.089503.07152HepG2HLTF
chr2238909154238909221+intron-Distal3.896563.49011K562KHSRP
chr2238989049238989145+intron-Distal3.863836.25586HepG2SUGP2
chr2239006281239006347+intron-Distal4.609845.84605HepG2CSTF2T
chr2238892598238892672+intron-Distal4.595529.64289HepG2PCBP2
chr2238880610238880682+intron-Distal4.648655.61356K562FMR1
chr2239001915239001983+intron-Distal4.399085.31936HepG2HNRNPK
chr2238981525238981616+intron-Distal5.155047.71416K562EXOSC5
chr2238981038238981087+intron-Distal4.007023.01456K562EXOSC5
chr2238981109238981159+intron-Distal4.059523.84389HepG2SUGP2
chr2239002640239002722+intron-Distal,intron-Proximal4.423568.96810HepG2BUD13
chr2238996476238996535+intron-Distal4.010984.51328K562SAFB2
chr2238981236238981288+intron-Distal3.903793.01456K562EXOSC5
chr2238930824238930882+intron-Distal4.062963.43813HepG2HNRNPC
chr2239005824239005862+intron-Distal3.866353.16310HepG2CSTF2T
chr2238984752238984811+intron-Distal4.216573.80778HepG2QKI
chr2239001676239001782+intron-Distal5.7160213.63136HepG2HNRNPK
chr2238969684238969777+5'-UTR,CDS,intron-Distal3.973754.61051HepG2DDX3X
chr2239002631239002714+intron-Distal,intron-Proximal5.738118.08771HepG2EFTUD2
chr2238892672238892787+intron-Distal7.1357136.40944HepG2PCBP2
chr2238989057238989161+intron-Distal3.422776.21102HepG2MATR3
chr2238992809238992887+intron-Distal4.350304.44649HepG2HLTF
chr2239005553239005618+intron-Distal,intron-Proximal3.478693.52528HepG2FAM120A
chr2238989056238989094+intron-Distal4.477383.27946HepG2HNRNPM
chr2239001430239001491+intron-Distal4.423544.87774HepG2HNRNPK
chr2238992459238992580+intron-Distal4.016283.84033K562SAFB2
chr2238983704238983773+intron-Distal3.118213.14999K562EXOSC5
chr2239002098239002196+intron-Distal3.865805.33975HepG2HNRNPK
chr2239002895239002941+intron-Distal4.056886.02363HepG2U2AF2
chr2238994900238994974+intron-Distal4.073754.58306K562SAFB2
chr2239005559239005614+intron-Proximal3.741905.08839HepG2CSTF2T
chr2239003178239003236+3'-UTR,CDS,intron-Proximal4.384433.85435K562PRPF8
chr2239002588239002680+intron-Distal,intron-Proximal4.2860912.02505K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for UBE2F-SCLY is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for UBE2F-SCLY is not available on ENCORE database.

  • 28 RBPs can affect the levels of UBE2F-SCLY.  








The Knockdown/knockout RNA-Seq assay for UBE2F-SCLY is not available on ENCORE database.





28 RBPs can affect the gene expression of UBE2F-SCLY :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
UBE2F-SCLYENSG00000258984.111.386900.984403.532002.203801.50930HepG2CIRBP
UBE2F-SCLYENSG00000258984.115.699001.027603.933203.072802.42470HepG2DDX6
UBE2F-SCLYENSG00000258984.10.581508.95160-3.944402.179401.39080HepG2GEMIN5
UBE2F-SCLYENSG00000258984.111.078800.0000099999.999903.432202.77240HepG2PCBP1
UBE2F-SCLYENSG00000258984.169.754501.779705.2925018.9373017.56330HepG2PUF60
UBE2F-SCLYENSG00000258984.113.727200.0000099999.999903.770903.05820HepG2QKI
UBE2F-SCLYENSG00000258984.115.247401.758103.116401.854501.32790HepG2SRSF5
UBE2F-SCLYENSG00000258984.117.693201.758803.330402.807101.59510HepG2SUB1
UBE2F-SCLYENSG00000258984.116.991501.890203.168102.793001.31660HepG2TRA2A
UBE2F-SCLYENSG00000258984.115.657601.224703.676302.181401.31760HepG2U2AF2
UBE2F-SCLYENSG00000258984.10.5697010.71030-4.232702.562301.88630HepG2UPF1
UBE2F-SCLYENSG00000258984.14.3424023.49190-2.435602.676901.51690K562AARS
UBE2F-SCLYENSG00000258984.114.877001.434403.374502.733001.70400K562EIF3D
UBE2F-SCLYENSG00000258984.12.8147016.24980-2.529402.240901.47720K562FIP1L1
UBE2F-SCLYENSG00000258984.10.0000022.31530-99999.999996.344504.51600K562FKBP4
UBE2F-SCLYENSG00000258984.128.420106.513002.125402.563301.40280K562HNRNPA2B1
UBE2F-SCLYENSG00000258984.15.8129025.70660-2.144802.665102.07720K562HNRNPC
UBE2F-SCLYENSG00000258984.12.0017022.95530-3.519503.997302.59390K562HNRNPF
UBE2F-SCLYENSG00000258984.131.266707.984201.969302.005401.31160K562KIF1C
UBE2F-SCLYENSG00000258984.10.0000022.92040-99999.999996.384803.99610K562LSM11
UBE2F-SCLYENSG00000258984.123.867506.269201.928602.148001.39330K562NAA15
UBE2F-SCLYENSG00000258984.113.611301.088603.644102.650401.44650K562PABPC1
UBE2F-SCLYENSG00000258984.14.5953025.09700-2.449303.048001.54250K562PHF6
UBE2F-SCLYENSG00000258984.12.7389023.04840-3.073002.948302.00970K562PSIP1
UBE2F-SCLYENSG00000258984.11.7611019.93380-3.500703.279402.13820K562SRFBP1
UBE2F-SCLYENSG00000258984.128.414307.189401.982602.715701.30810K562SUPT6H
UBE2F-SCLYENSG00000258984.14.9246022.16890-2.170502.314001.46330K562TIAL1
UBE2F-SCLYENSG00000258984.13.9734023.55040-2.567303.227102.18700K562TRIM56
UBE2F-SCLYENSG00000258984.125.476506.106802.060603.123002.26990K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for UBE2F-SCLY is not available on ENCORE database.





27 RBPs can affect the splicing of UBE2F-SCLY :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEUBE2F-SCLYENSG00000258984.1chr2+238896604238896634238881733238881867238933982238934053-0.074000.006370.08897excludedK562SF3B4
SEUBE2F-SCLYENSG00000258984.1chr2+238939196238939254238933914238934053238940862238940895-0.086000.006110.08857excludedHepG2U2AF1
SEUBE2F-SCLYENSG00000258984.1chr2+238991888238991995238990636238990850238999858238999895-0.243000.003240.07612excludedK562AKAP8L
SEUBE2F-SCLYENSG00000258984.1chr2+2389824232389824882389779372389781182389903492389904770.723000.000010.00224includedHepG2HNRNPM
SEUBE2F-SCLYENSG00000258984.1chr2+2389824232389824882389779882389781182389903492389904770.247000.000010.00038includedHepG2HNRNPK
SEUBE2F-SCLYENSG00000258984.1chr2+238939196238939254238933982238934053238940862238940895-0.151000.000000.00000excludedHepG2U2AF2
SEUBE2F-SCLYENSG00000258984.1chr2+2389918882389919952389906852389908502389998582389999050.291000.000860.03474includedK562FXR1
SEUBE2F-SCLYENSG00000258984.1chr2+238991888238991995238990685238990850238999858238999895-0.290000.003310.04527excludedK562PUS1
SEUBE2F-SCLYENSG00000258984.1chr2+2389824232389824882389779372389781182389903492389904770.231000.000220.01886includedHepG2NCBP2
SEUBE2F-SCLYENSG00000258984.1chr2+238982423238982488238977937238978118238990349238990477-0.809000.000240.01554excludedHepG2SFPQ
SEUBE2F-SCLYENSG00000258984.1chr2+2389824232389824882389779372389781182389903492389904770.387000.000000.00000includedHepG2MATR3
SEUBE2F-SCLYENSG00000258984.1chr2+238991888238991995238990685238990850238999858238999895-0.246000.000450.01329excludedHepG2SRSF1
SEUBE2F-SCLYENSG00000258984.1chr2+2388822902388823892388817332388818672388966042388966340.080000.000010.00129includedHepG2TIAL1
SEUBE2F-SCLYENSG00000258984.1chr2+238933982238934053238903385238903451238939196238939254-0.083000.002780.04557excludedK562U2AF2
SEUBE2F-SCLYENSG00000258984.1chr2+238991888238991995238990685238990850238999858238999895-0.335000.000300.01048excludedK562RBM15
SEUBE2F-SCLYENSG00000258984.1chr2+238991888238991995238990685238990850238999858238999895-0.611000.000000.00009excludedK562AGGF1
SEUBE2F-SCLYENSG00000258984.1chr2+2389005322389006492388966042388966342389033852389034510.087000.000220.00522includedK562HNRNPC
SEUBE2F-SCLYENSG00000258984.1chr2+2388948032388949342388817332388818672388966042388966340.073000.000000.00000includedK562HNRNPC
MXEUBE2F-SCLYENSG00000258984.1chr2+2389339822389340532389391962389392542389033852389034512389408622389408950.155000.000130.004011includedHepG2U2AF1
MXEUBE2F-SCLYENSG00000258984.1chr2+238925207238925275238940862238940895238903385238903451238944518238944581-0.141000.002520.043522includedHepG2U2AF1
MXEUBE2F-SCLYENSG00000258984.1chr2+238925207238925275238933982238934053238903385238903451238944518238944581-0.106000.000470.011692includedHepG2U2AF1
MXEUBE2F-SCLYENSG00000258984.1chr2+2389252072389252752389339822389340532389033852389034512389445182389445810.108000.000890.021471includedHepG2SRSF1
MXEUBE2F-SCLYENSG00000258984.1chr2+238933982238934053238939196238939254238903385238903451238940862238940895-0.109000.004200.069012includedHepG2SRSF1
MXEUBE2F-SCLYENSG00000258984.1chr2+2389252072389252752389339822389340532389033852389034512389445182389445810.154000.000070.009091includedHepG2IGF2BP3
MXEUBE2F-SCLYENSG00000258984.1chr2+238933982238934053238939196238939254238903385238903451238940862238940895-0.170000.000250.023542includedHepG2IGF2BP3
MXEUBE2F-SCLYENSG00000258984.1chr2+238991888238991995238999858238999895238990685238990850239002501239002585-0.321000.000120.013272includedHepG2IGF2BP3
MXEUBE2F-SCLYENSG00000258984.1chr2+2389339822389340532389445182389445812389252072389252752389499282389500450.119000.012150.099661includedK562DROSHA
MXEUBE2F-SCLYENSG00000258984.1chr2+2389033852389034512389339822389340532388966042388966342389391962389392540.139000.006900.079221includedK562U2AF1
MXEUBE2F-SCLYENSG00000258984.1chr2+2389033852389034512389339822389340532388817332388818672389391962389392540.077000.000390.009431includedK562U2AF1
MXEUBE2F-SCLYENSG00000258984.1chr2+2389339822389340532389391962389392542389033852389034512389408622389408950.139000.000020.000331includedK562AQR
MXEUBE2F-SCLYENSG00000258984.1chr2+238925207238925275238933982238934053238903385238903451238944518238944581-0.222000.000000.000002includedK562AQR
MXEUBE2F-SCLYENSG00000258984.1chr2+2389339822389340532389391962389392542388966042388966342389408622389408950.058000.009070.087001includedK562U2AF2
MXEUBE2F-SCLYENSG00000258984.1chr2+238896604238896634238903385238903451238881733238881867238939196238939254-0.066000.000670.011402includedK562U2AF2
MXEUBE2F-SCLYENSG00000258984.1chr2+2389339822389340532389445182389445812389033852389034512389499282389500450.105000.000270.013641includedHepG2SF3A3
MXEUBE2F-SCLYENSG00000258984.1chr2+2389339822389340532389391962389392542389033852389034512389408622389408950.118000.000900.034161includedHepG2SF3A3
MXEUBE2F-SCLYENSG00000258984.1chr2+238925207238925275238933982238934053238903385238903451238944518238944581-0.156000.000000.000082includedHepG2SF3A3
MXEUBE2F-SCLYENSG00000258984.1chr2+2388817332388818672388966042388966342388756552388757742389033852389034510.212000.000630.019141includedK562TARDBP
MXEUBE2F-SCLYENSG00000258984.1chr2+238925207238925275238933982238934053238903385238903451238944518238944581-0.113000.002900.070112includedK562EFTUD2
MXEUBE2F-SCLYENSG00000258984.1chr2+2389251742389252752389339822389340532389033852389034512389391962389392540.063000.001100.008721includedHepG2U2AF2
MXEUBE2F-SCLYENSG00000258984.1chr2+2389033852389034512389339822389340532388966042388966342389391962389392540.239000.001910.014051includedHepG2U2AF2
MXEUBE2F-SCLYENSG00000258984.1chr2+2389339822389340532389391962389392542389033852389034512389408622389408950.187000.000000.000001includedHepG2U2AF2
MXEUBE2F-SCLYENSG00000258984.1chr2+238896604238896634238903385238903451238881733238881867238925207238925275-0.224000.000090.001072includedHepG2U2AF2
MXEUBE2F-SCLYENSG00000258984.1chr2+2388817332388818672389033852389034512388757162388757742389252072389252750.152000.002170.065021includedHepG2SF3B4
MXEUBE2F-SCLYENSG00000258984.1chr2+2389252072389252752389339822389340532389033852389034512389391962389392540.237000.000000.000091includedHepG2HNRNPUL1
MXEUBE2F-SCLYENSG00000258984.1chr2+238903385238903451238925207238925275238896604238896634238944518238944581-0.108000.004390.098782includedHepG2HNRNPC
MXEUBE2F-SCLYENSG00000258984.1chr2+238976705238976806238982423238982488238972997238973110238990349238990477-0.242000.000560.017832includedHepG2HNRNPK
MXEUBE2F-SCLYENSG00000258984.1chr2+2388822902388823892388948032388949342388817332388818672388966042388966340.150000.001270.061111includedHepG2LARP4
MXEUBE2F-SCLYENSG00000258984.1chr2+2389252072389252752389339822389340532389033852389034512389391962389392540.140000.004580.095611includedK562DHX30
MXEUBE2F-SCLYENSG00000258984.1chr2+238896604238896634238903385238903451238881733238881867238925207238925275-0.146000.002760.069362includedK562DHX30
MXEUBE2F-SCLYENSG00000258984.1chr2+2388817332388818672388966042388966342388756552388757742389033852389034510.162000.002130.082561includedK562IGF2BP2
MXEUBE2F-SCLYENSG00000258984.1chr2+238903385238903451238933982238934053238896604238896634238944518238944581-0.193000.000070.002252includedK562SF3B4
MXEUBE2F-SCLYENSG00000258984.1chr2+238925207238925275238933982238934053238903385238903451238944518238944581-0.113000.007290.098562includedK562PRPF8
MXEUBE2F-SCLYENSG00000258984.1chr2+2389033852389034512389252072389252752388966042388966342389445182389445810.123000.001560.032021includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for UBE2F-SCLY is not avaliable on ENCORE database.