UBAP2L

General Information

Gene Name       : UBAP2L
Gene ID             : ENSG00000143569.18
Essential Gene : No

Functions

Localization(RBPImage: UBAP2L)

Domains (AlphaFold: UBAP2L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878UBAP2LENSG00000143569.18113.69111.77112.73ENCSR000AEF
HepG2UBAP2LENSG00000143569.18136.53127.65132.09ENCSR985KAT
K562UBAP2LENSG00000143569.18139.33164.79152.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
UBAP2L40199S1Submitted, ENCORE2


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
UBAP2LK562shRNABGKLV32-59,BGKLV32-60BGKLV32-1,BGKLV32-2no clear band,NotSatisfiedENCODE3
UBAP2LK562shRNABGKLV34-41,BGKLV34-42BGKLV34-1,BGKLV34-2NotSatisfiedENCODE3
UBAP2LK562shRNABGKLV38-95,BGKLV38-96BGKLV38-1,BGKLV38-2NotSatisfiedENCODE3
UBAP2LK562shRNABGKLV38-97,BGKLV38-98BGKLV38-1,BGKLV38-2no clear band,NotSatisfiedENCODE3
UBAP2LK562shRNABGKLV38-99,BGKLV38-100BGKLV38-1,BGKLV38-2NotSatisfiedENCODE3
UBAP2LHepG2shRNABGHLV23-55,BGHLV23-56BGHLV23-1,BGHLV23-2redo transfection,redo transfectionNotSatisfiedENCODE3
UBAP2LHepG2shRNABGHLV37-69,BGHLV37-70BGHLV37-1,BGHLV37-2no clear band,no clear bandNotSatisfiedENCODE3
UBAP2LHepG2shRNABGHLV37-71,BGHLV37-72BGHLV37-1,BGHLV37-2no clear band,NotSatisfiedENCODE3
UBAP2LK562CRISPRBGKcLV37-53,BGKcLV37-54BGKcLV37-1,BGKcLV37-2NO CLEAR BAND,NotSatisfiedENCORE2
UBAP2LK562CRISPRBGKcLV46-109,BGKcLV46-110BGKcLV46-1,BGKcLV46-2ExperimentedENCORE2
UBAP2LHepG2CRISPRBGHcLV36-51,BGHcLV36-52BGHcLV36-1,BGHcLV36-2NO CLEAR BAND ON THE POSITION,NotSatisfiedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    UBAP2L: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Mutually Exclusive from Nucleolus
  • Speckles
  • Cytoplasm
  • Cytosolic












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    UBAP2LProduct_ID: 40199S
    Lot_ID: 1
    Source: Cell Signaling Technology
    Target Name: UBAP2L-human    		 CST_40199S_1_UBAP2L.png<br>Caption: IP-WB analysis of 40199S whole cell lysate using the UBAP2L specific antibody, 40199S. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the UBAP2L-specific antibody, 40199S. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.








    RNA Targets

    • eCLIP assay for UBAP2L is not avaliable on ENCORE database.



    Proteins bound to RNA
    • UBAP2L RNA is bound by 51 proteins.  







    eCLIP assay for UBAP2L is not avaliable on ENCORE database.





    51 proteins are bound to UBAP2L RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr1154235663154235744+3'-UTR,intron-Distal3.7160810.56510HepG2SUB1
    chr1154243109154243148+3'-UTR,intron-Distal3.232793.81856K562IGF2BP1
    chr1154243259154243316+3'-UTR,intron-Proximal4.192413.61393K562CPSF6
    chr1154243259154243301+3'-UTR,intron-Proximal5.133474.79197K562ZC3H11A
    chr1154242984154243034+3'-UTR,intron-Distal4.1250317.48067K562TIA1
    chr1154243024154243093+3'-UTR,intron-Distal3.766103.31824HepG2TIAL1
    chr1154235793154235850+3'-UTR,intron-Distal3.895157.43270HepG2PCBP2
    chr1154242978154243030+3'-UTR,intron-Distal3.755439.21389K562HNRNPK
    chr1154243047154243126+3'-UTR,intron-Distal4.213439.30845HepG2XPO5
    chr1154242979154243030+3'-UTR,intron-Distal5.2076820.89142K562U2AF2
    chr1154242904154242958+3'-UTR,intron-Distal4.5304111.17441HepG2PCBP2
    chr1154235779154235793+3'-UTR,intron-Distal3.512079.30098K562YBX3
    chr1154242979154243028+3'-UTR,intron-Distal3.518658.27837K562U2AF1
    chr1154242977154243022+3'-UTR,intron-Distal3.250504.42079K562PCBP1
    chr1154242985154243023+3'-UTR,intron-Distal4.488413.47425HepG2U2AF1
    chr1154218846154218895+3'-UTR,CDS,intron-Proximal5.0737311.65116K562AQR
    chr1154242979154243020+3'-UTR,intron-Distal5.1480716.58249HepG2PCBP2
    chr1154242974154243035+3'-UTR,intron-Distal4.1020436.53315HepG2U2AF2
    chr1154197559154197584+5'-UTR,intron-Proximal5.4938361.78008K562PUM2
    chr1154193405154193494+5'-UTR,intron-Distal,intron-Proximal4.163906.90654K562GEMIN5
    chr1154197584154197650+5'-UTR,CDS5.57453400.00000K562PUM2
    chr1154193420154193453+5'-UTR,intron-Distal,intron-Proximal6.0020929.15011K562PUM2
    chr1154193753154193899+5'-UTR,intron-Distal,intron-Proximal3.585009.62713HepG2NKRF
    chr1154193755154193848+5'-UTR,intron-Distal3.646583.77567K562NONO
    chr1154193804154193857+5'-UTR,intron-Distal3.178465.36626HepG2EFTUD2
    chr1154193399154193525+5'-UTR,intron-Distal,intron-Proximal4.492758.63366HepG2NCBP2
    chr1154197579154197653+5'-UTR,CDS3.0732711.96489K562DDX3X
    chr1154193734154193855+5'-UTR,intron-Distal3.649363.04470K562FUS
    chr1154233455154233524+CDS4.4232910.29151K562IGF2BP2
    chr1154227655154227801+CDS5.6783811.15932HepG2IGF2BP1
    chr1154201141154201148+CDS4.007135.59722K562LIN28B
    chr1154226563154226609+CDS,intron-Proximal4.4272912.02505K562AQR
    chr1154228158154228202+CDS,intron-Proximal3.095444.13941K562IGF2BP1
    chr1154223514154223563+CDS,intron-Proximal4.3918210.52112K562LIN28B
    chr1154235579154235605+CDS,intron-Distal3.525384.18806HepG2U2AF2
    chr1154221671154221752+CDS,intron-Proximal4.177899.10472K562AQR
    chr1154213980154214032+CDS,intron-Proximal3.405734.10517K562U2AF2
    chr1154209598154209612+CDS3.9215912.20614K562UCHL5
    chr1154233584154233633+CDS,intron-Proximal4.281029.78712K562AQR
    chr1154233562154233622+CDS,intron-Proximal4.5391911.26073HepG2PRPF8
    chr1154241404154241431+CDS,intron-Proximal3.557505.10201HepG2IGF2BP1
    chr1154232498154232551+CDS,intron-Proximal3.6023214.31585HepG2PRPF8
    chr1154218687154218825+CDS3.2674719.08861K562DDX24
    chr1154214040154214045+CDS,intron-Proximal3.7863711.89449K562AQR
    chr1154209043154209068+CDS3.331594.85828HepG2BCLAF1
    chr1154207180154207233+CDS,intron-Proximal3.452944.47362HepG2G3BP1
    chr1154213987154214055+CDS,intron-Proximal3.8317820.13029K562UCHL5
    chr1154221717154221780+CDS3.0966910.64457K562UCHL5
    chr1154213980154214026+CDS,intron-Proximal3.632565.37697K562EFTUD2
    chr1154234090154234169+CDS3.047134.34945K562TARDBP
    chr1154242654154242712+CDS,intron-Distal,intron-Proximal3.3238912.14967HepG2U2AF2
    chr1154209034154209092+CDS,intron-Proximal3.236864.68978K562U2AF2
    chr1154226491154226529+CDS4.042743.11282HepG2G3BP1
    chr1154223700154223757+CDS3.325986.95218K562UCHL5
    chr1154209499154209531+CDS,intron-Proximal4.018203.35081HepG2G3BP1
    chr1154232442154232505+CDS3.1992913.23928K562IGF2BP2
    chr1154232433154232479+CDS3.252673.24162HepG2G3BP1
    chr1154228226154228289+CDS,intron-Proximal4.574994.28193HepG2AQR
    chr1154199809154199833+CDS3.357195.30777HepG2PPIG
    chr1154207672154207768+CDS,intron-Proximal4.4377926.63367K562UCHL5
    chr1154224030154224081+CDS3.105413.13141K562RBM15
    chr1154209037154209075+CDS,intron-Proximal3.796326.98930HepG2U2AF2
    chr1154213987154214032+CDS,intron-Proximal3.520694.31813HepG2G3BP1
    chr1154221706154221765+CDS,intron-Proximal3.9264613.12638K562BUD13
    chr1154207673154207760+CDS3.4692123.07263HepG2PPIG
    chr1154232436154232504+CDS3.8499810.06315HepG2IGF2BP1
    chr1154209502154209537+CDS3.516956.64170K562BUD13
    chr1154227305154227360+CDS,intron-Proximal3.133644.47064HepG2U2AF1
    chr1154227311154227364+CDS,intron-Proximal3.741146.75003K562IGF2BP2
    chr1154214024154214077+CDS,intron-Proximal3.266595.54854HepG2GRWD1
    chr1154227304154227366+CDS,intron-Proximal3.422137.31070K562U2AF2
    chr1154213987154213991+CDS,intron-Proximal4.864597.77351K562GRWD1
    chr1154223768154223795+CDS,intron-Proximal3.917803.66655K562YBX3
    chr1154229647154229727+CDS3.9306914.70562K562IGF2BP1
    chr1154209499154209553+CDS,intron-Proximal3.360813.48848HepG2FXR2
    chr1154207673154207735+CDS3.673697.72566K562ZNF800
    chr1154209500154209561+CDS4.3675515.25586K562DDX24
    chr1154201090154201146+CDS,intron-Proximal3.792658.94272HepG2GRWD1
    chr1154232424154232504+CDS3.6472713.70441K562IGF2BP1
    chr1154233503154233561+CDS3.2704910.04645K562YBX3
    chr1154227317154227377+CDS,intron-Proximal3.391227.92471HepG2PRPF8
    chr1154223516154223609+CDS,intron-Proximal3.1592321.54821K562ZNF622
    chr1154223670154223769+CDS3.024877.65318HepG2GRWD1
    chr1154209040154209073+CDS,intron-Proximal3.486619.08133K562BUD13
    chr1154229827154229868+CDS4.189714.43679K562IGF2BP1
    chr1154214030154214089+CDS,intron-Proximal4.4648615.37741K562SF3B4
    chr1154226531154226561+CDS3.156344.34695HepG2BCLAF1
    chr1154209557154209594+CDS3.1557610.43139K562UCHL5
    chr1154229582154229602+CDS3.607608.22188K562IGF2BP2
    chr1154209041154209069+CDS,intron-Proximal3.2372910.83627K562ZNF622
    chr1154229602154229656+CDS3.0776511.74029K562IGF2BP2
    chr1154223956154223999+CDS,intron-Proximal3.3123616.85674K562ZNF622
    chr1154221731154221768+CDS5.012877.04013HepG2BCLAF1
    chr1154207072154207234+CDS,intron-Proximal3.003897.94466HepG2GRWD1
    chr1154209041154209084+CDS,intron-Proximal3.6295010.37782HepG2PPIG
    chr1154226410154226431+CDS4.150823.80193HepG2GRWD1
    chr1154207103154207144+CDS3.998595.79432HepG2BCLAF1
    chr1154201142154201190+CDS4.7172713.39104HepG2LIN28B
    chr1154227313154227349+CDS3.174616.14940K562DDX24
    chr1154233319154233376+CDS,intron-Proximal3.9615212.87095K562SF3B4
    chr1154213988154214043+CDS,intron-Proximal4.1280515.11363K562DDX24
    chr1154218681154218728+CDS3.316483.22540HepG2G3BP1
    chr1154221716154221795+CDS3.5190718.33476K562ZNF622
    chr1154229586154229714+CDS3.227996.39448HepG2IGF2BP3
    chr1154229500154229567+CDS,intron-Proximal5.0152222.06254K562AQR
    chr1154214034154214092+CDS,intron-Proximal3.567347.01246HepG2BCLAF1
    chr1154209499154209543+CDS,intron-Proximal3.228305.35431HepG2BCLAF1
    chr1154233575154233634+CDS,intron-Proximal3.017827.11898K562PRPF8
    chr1154207684154207767+CDS4.0676921.62308K562DDX24
    chr1154226494154226566+CDS,intron-Proximal3.818923.77064HepG2IGF2BP3
    chr1154207676154207769+CDS,intron-Proximal3.208657.20736HepG2G3BP1
    chr1154226555154226612+CDS,intron-Proximal3.333594.50321HepG2PRPF8
    chr1154214038154214081+CDS,intron-Proximal3.723308.46496HepG2BUD13
    chr1154214026154214100+CDS,intron-Proximal4.7270722.59803K562EFTUD2
    chr1154223956154224015+CDS,intron-Proximal4.093487.03378HepG2GRWD1
    chr1154207727154207766+CDS3.645909.34681K562BUD13
    chr1154226481154226507+CDS3.617366.43326K562UCHL5
    chr1154229586154229655+CDS3.014467.30507HepG2IGF2BP1
    chr1154232446154232498+CDS3.0160110.21719HepG2PRPF8
    chr1154209586154209612+CDS3.570183.79741HepG2GRWD1
    chr1154209040154209086+CDS,intron-Proximal3.7690112.50558K562UCHL5
    chr1154215693154215774+CDS3.334088.34038K562DDX24
    chr1154199726154199760+CDS,intron-Proximal4.998105.17615K562AQR
    chr1154209041154209087+CDS,intron-Proximal4.684645.77684HepG2G3BP1
    chr1154201148154201166+CDS5.9440645.89385K562LIN28B
    chr1154207677154207798+CDS,intron-Proximal3.4025010.34054K562GPKOW
    chr1154233524154233583+CDS3.035515.63752K562IGF2BP2
    chr1154207760154207768+CDS,intron-Proximal4.2441812.11762HepG2PPIG
    chr1154241278154241317+CDS3.088804.57695HepG2U2AF2
    chr1154229909154229985+CDS,intron-Proximal3.391967.13900K562AQR
    chr1154213991154214026+CDS4.5361310.62857K562GRWD1
    chr1154227303154227362+CDS,intron-Proximal3.5602712.21989HepG2U2AF2
    chr1154209039154209084+CDS,intron-Proximal4.3699617.30887K562DDX24
    chr1154207721154207767+CDS4.0420820.29460K562ZNF622
    chr1154229710154229774+CDS,intron-Proximal4.168286.04280HepG2PRPF8
    chr1154218730154218826+CDS3.8248613.02441HepG2GRWD1
    chr1154226472154226563+CDS3.1686811.58386K562DDX24
    chr1154223764154223794+CDS4.2657917.28801K562ZNF622
    chr1154241291154241361+CDS3.7517812.43329K562IGF2BP2
    chr1154209590154209613+CDS,intron-Proximal3.437466.60490HepG2BCLAF1
    chr1154227301154227345+CDS,intron-Proximal3.177209.16870K562AQR
    chr1154199817154199834+CDS3.056897.08726K562ZNF622
    chr1154207069154207134+CDS3.288146.07803K562FMR1
    chr1154229655154229726+CDS4.317226.34884HepG2IGF2BP1
    chr1154213988154214068+CDS,intron-Proximal3.872893.94400HepG2UCHL5
    chr1154213986154214038+CDS,intron-Proximal3.3174810.90434HepG2BUD13
    chr1154226511154226566+CDS,intron-Proximal3.0251411.27549K562IGF2BP1
    chr1154209597154209613+CDS,intron-Proximal4.047586.80284K562DDX24
    chr1154197600154197660+CDS3.017864.64637K562FXR2
    chr1154207070154207114+CDS3.753798.56897K562DDX24
    chr1154221739154221750+CDS3.897005.64813K562DDX24
    chr1154213988154214030+CDS,intron-Proximal3.0891417.28613K562ZNF622
    chr1154207150154207234+CDS,intron-Proximal3.370768.45284K562DDX24
    chr1154228208154228268+CDS,intron-Proximal3.513025.62208HepG2PRPF8
    chr1154221741154221771+CDS3.919803.88696K562GRWD1
    chr1154232405154232440+CDS,intron-Proximal4.138054.89971K562U2AF2
    chr1154207673154207721+CDS3.6463214.74391K562ZNF622
    chr1154228225154228273+CDS,intron-Proximal3.178876.97601K562PRPF8
    chr1154214030154214042+CDS,intron-Proximal3.316998.68700K562ZNF622
    chr1154215669154215747+CDS,intron-Proximal3.7964134.09388K562SF3B4
    chr1154207688154207767+CDS4.265837.16354HepG2FXR2
    chr1154209543154209587+CDS4.229627.09561HepG2BCLAF1
    chr1154201166154201200+CDS5.6049547.00016K562LIN28B
    chr1154213988154214046+CDS,intron-Proximal3.563555.95351HepG2PRPF8
    chr1154215718154215776+CDS3.044507.89688HepG2PPIG
    chr1154207669154207768+CDS,intron-Proximal3.344229.07205HepG2BCLAF1
    chr1154218800154218845+CDS3.3437411.06731K562ZNF622
    chr1154232430154232496+CDS3.211614.57500K562PCBP1
    chr1154227311154227340+CDS,intron-Proximal4.008153.68241HepG2G3BP1
    chr1154241429154241546+CDS,intron-Distal,intron-Proximal4.6210419.39708K562PCBP1
    chr1154234219154234297+intron-Distal,intron-Proximal3.303833.34872HepG2CDC40
    chr1154230202154230318+intron-Distal4.195493.47043HepG2KHSRP
    chr1154229943154230048+intron-Distal,intron-Proximal4.5323310.81737K562TIA1
    chr1154242023154242097+intron-Distal6.5353215.19890HepG2PCBP2
    chr1154232239154232244+intron-Distal4.37428400.00000HepG2DKC1
    chr1154241487154241580+intron-Distal,intron-Proximal5.7813825.20096HepG2PCBP2
    chr1154210912154210966+intron-Distal3.184903.11000HepG2HNRNPM
    chr1154210977154211026+intron-Distal3.106554.32038K562HNRNPM
    chr1154214174154214205+intron-Distal3.966595.18845HepG2U2AF2
    chr1154232209154232239+intron-Distal4.95304400.00000HepG2DKC1
    chr1154206130154206197+intron-Distal4.660005.71021K562TARDBP
    chr1154232301154232333+intron-Distal,intron-Proximal5.53916400.00000HepG2DKC1
    chr1154241679154241793+intron-Distal,intron-Proximal3.635015.96106K562HNRNPK
    chr1154242202154242260+intron-Distal3.814203.26999K562U2AF2
    chr1154210275154210311+intron-Distal3.659234.38996HepG2HNRNPM
    chr1154214093154214174+intron-Distal,intron-Proximal3.557917.47364K562PRPF8
    chr1154241675154241771+intron-Distal,intron-Proximal4.263734.62179HepG2HNRNPK
    chr1154232318154232346+intron-Distal,intron-Proximal3.7824428.40565K562SMNDC1
    chr1154232548154232618+intron-Distal,intron-Proximal3.789834.79829K562EFTUD2
    chr1154231309154231381+intron-Distal,intron-Proximal4.3185015.06734K562KHSRP
    chr1154242052154242102+intron-Distal3.785583.34601K562HNRNPK
    chr1154210973154211030+intron-Distal3.602143.68481HepG2HNRNPM
    chr1154234221154234285+intron-Distal,intron-Proximal5.033458.01982HepG2EFTUD2
    chr1154232270154232274+intron-Distal5.70324400.00000HepG2DKC1
    chr1154234636154234709+intron-Distal3.185135.12776HepG2U2AF2
    chr1154241933154241985+intron-Distal,intron-Proximal3.402826.36450HepG2U2AF2
    chr1154232254154232259+intron-Distal5.40959400.00000HepG2DKC1
    chr1154234241154234284+intron-Distal,intron-Proximal3.596404.88100K562AQR
    chr1154211904154211960+intron-Distal3.264593.59803HepG2PTBP1
    chr1154205504154205550+intron-Distal3.961193.43813HepG2HNRNPC
    chr1154193563154193640+intron-Distal,intron-Proximal3.834054.59716HepG2HNRNPK
    chr1154214143154214174+intron-Distal3.381634.57751HepG2U2AF2
    chr1154232303154232318+intron-Distal3.3672231.57549K562SMNDC1
    chr1154234233154234298+intron-Distal,intron-Proximal3.8623010.90795K562PRPF8
    chr1154232277154232289+intron-Distal5.65826400.00000HepG2DKC1
    chr1154214318154214365+intron-Distal4.009586.40042K562EFTUD2
    chr1154234238154234307+intron-Distal,intron-Proximal4.082318.02891K562EFTUD2
    chr1154229921154230031+intron-Distal,intron-Proximal3.7291510.50879K562PRPF8
    chr1154232202154232209+intron-Distal4.52404400.00000HepG2DKC1
    chr1154207849154207877+intron-Distal,intron-Proximal3.823594.00320K562AQR
    chr1154226865154226937+intron-Distal5.9923211.78880HepG2XPO5
    chr1154232244154232254+intron-Distal5.38114400.00000HepG2DKC1
    chr1154226646154226720+intron-Distal,intron-Proximal3.203143.49653K562PRPF8
    chr1154230038154230122+intron-Distal,intron-Proximal4.222179.63457K562KHSRP
    chr1154236720154236785+intron-Distal4.550865.42395HepG2HNRNPM
    chr1154241711154241790+intron-Distal,intron-Proximal5.579525.77028HepG2PCBP2
    chr1154241465154241539+intron-Distal,intron-Proximal4.063607.33269K562PTBP1
    chr1154194057154194163+intron-Distal5.4466810.50469K562NONO
    chr1154228328154228404+intron-Distal,intron-Proximal3.992119.59600K562AQR
    chr1154241502154241542+intron-Distal,intron-Proximal4.540733.92947HepG2DDX59
    chr1154242056154242151+intron-Distal3.062035.34304K562ILF3
    chr1154242225154242254+intron-Distal4.701345.47569HepG2U2AF2
    chr1154237409154237445+intron-Distal4.884186.45442HepG2HNRNPM
    chr1154201972154202031+intron-Distal3.833243.60940HepG2HNRNPC
    chr1154231240154231309+intron-Distal,intron-Proximal3.219585.96041K562KHSRP
    chr1154230276154230401+intron-Distal5.3114610.51914K562TARDBP
    chr1154241537154241608+intron-Distal3.826113.23561HepG2U2AF1
    chr1154232259154232270+intron-Distal5.49328400.00000HepG2DKC1
    chr1154236521154236569+intron-Distal3.897453.07980HepG2HNRNPM
    chr1154232274154232277+intron-Distal5.70898400.00000HepG2DKC1
    chr1154209776154209851+intron-Distal4.607856.73684K562KHSRP
    chr1154234182154234223+intron-Proximal3.788114.23459K562PRPF8
    chr1154197693154197731+intron-Proximal5.123636.44303K562AQR
    chr1154228231154228235+intron-Proximal7.0935825.56549K562AQR
    chr1154207776154207804+intron-Proximal4.734824.86944K562AQR
    chr1154226609154226640+intron-Proximal4.138504.15711K562AQR
    chr1154209092154209173+intron-Proximal4.7947613.90015K562AQR
    chr1154232361154232393+intron-Proximal3.558435.02403K562SF3B4
    chr1154227817154227839+intron-Proximal4.035845.26367K562AQR
    chr1154228288154228306+intron-Proximal4.9161111.12698K562AQR
    chr1154241446154241487+intron-Proximal5.1714213.68052HepG2PCBP2
    chr1154228273154228311+intron-Proximal5.212107.21051K562PRPF8
    chr1154228235154228273+intron-Proximal7.6789842.91590K562AQR
    chr1154228273154228288+intron-Proximal5.2289014.81877K562AQR
    chr1154232541154232587+intron-Proximal3.808435.28701K562PRPF8
    chr1154227368154227402+intron-Proximal3.678914.65388K562PRPF8
    chr1154234177154234215+intron-Proximal3.323595.11990K562AQR
    chr1154231393154231446+intron-Proximal4.457048.03431HepG2SF3A3
    chr1154232333154232344+intron-Proximal6.24039400.00000HepG2DKC1
    chr1154214045154214085+intron-Proximal4.8854121.85820K562AQR
    chr1154209623154209648+intron-Proximal3.768384.49024K562AQR
    chr1154215639154215669+intron-Proximal4.9354733.82359K562SF3B4
    chr1154241430154241479+intron-Proximal4.247596.01372K562AQR
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    eCLIP assay for UBAP2L is not avaliable on ENCORE database.



    Diffrential Expression

    • The Knockdown/knockout assay for UBAP2L is not available on ENCORE database.

    • 76 RBPs can affect the levels of UBAP2L.  








    The Knockdown/knockout RNA-Seq assay for UBAP2L is not available on ENCORE database.





    76 RBPs can affect the gene expression of UBAP2L :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    UBAP2LENSG00000143569.142905.653903621.42920-0.317702.023801.56110HepG2AKAP1
    UBAP2LENSG00000143569.146226.632609091.24730-0.546003.684503.00500HepG2BOP1
    UBAP2LENSG00000143569.144282.014305096.38770-0.251202.757301.98690HepG2CALR
    UBAP2LENSG00000143569.143714.190602846.785000.383603.418002.56420HepG2CIRBP
    UBAP2LENSG00000143569.143931.688003366.615800.223703.036402.34620HepG2CKAP4
    UBAP2LENSG00000143569.142343.300301774.441800.401101.973301.33230HepG2CNOT7
    UBAP2LENSG00000143569.142939.872403808.45880-0.373506.255905.36250HepG2CELF1
    UBAP2LENSG00000143569.143587.899303114.553800.204002.706801.88170HepG2DDX19B
    UBAP2LENSG00000143569.142547.759603055.79470-0.262302.141601.53630HepG2DDX21
    UBAP2LENSG00000143569.142551.842503468.95780-0.443004.002503.26160HepG2DDX3X
    UBAP2LENSG00000143569.142300.991202856.51900-0.312001.973601.30910HepG2DDX55
    UBAP2LENSG00000143569.142240.127702980.13590-0.411803.081202.43250HepG2DDX6
    UBAP2LENSG00000143569.142465.688203060.13300-0.311603.366902.66050HepG2DNAJC2
    UBAP2LENSG00000143569.144043.444603295.096400.295202.314501.47010HepG2EEF2
    UBAP2LENSG00000143569.142176.822302814.52340-0.370702.319901.31230HepG2AGO1
    UBAP2LENSG00000143569.142697.505303683.97400-0.449602.837201.70990HepG2FUS
    UBAP2LENSG00000143569.145312.869709462.20250-0.832707.155906.15760HepG2GPKOW
    UBAP2LENSG00000143569.141785.258103000.77390-0.7492011.9477010.59570HepG2HNRNPK
    UBAP2LENSG00000143569.142866.656603729.65980-0.379709.497908.32160HepG2HNRNPL
    UBAP2LENSG00000143569.146305.169009029.88590-0.518203.459202.76440HepG2HNRNPLL
    UBAP2LENSG00000143569.144014.538703213.302800.321102.164001.60260HepG2MATR3
    UBAP2LENSG00000143569.144163.180905457.32700-0.390504.638903.61180HepG2MSI2
    UBAP2LENSG00000143569.143131.884604060.16000-0.374505.287904.23960HepG2NOL12
    UBAP2LENSG00000143569.143848.060003142.149300.292302.469101.88820HepG2PCBP1
    UBAP2LENSG00000143569.146132.707805123.002300.259403.427602.57620HepG2PRPF4
    UBAP2LENSG00000143569.142212.343303875.91440-0.8090016.7239015.42880HepG2PUF60
    UBAP2LENSG00000143569.145395.345504114.613800.390909.849208.87720HepG2PUM1
    UBAP2LENSG00000143569.143932.510203430.311300.197002.276401.70470HepG2PUS1
    UBAP2LENSG00000143569.145378.489407023.66720-0.385005.784504.60190HepG2RBM15
    UBAP2LENSG00000143569.144889.644104140.114400.240003.231902.68360HepG2RBM22
    UBAP2LENSG00000143569.145118.031606288.03030-0.297002.853802.16150HepG2RPLP0
    UBAP2LENSG00000143569.143392.105802602.790200.382004.607303.83570HepG2RPS19
    UBAP2LENSG00000143569.142289.555001781.618900.361802.028001.34320HepG2RPS3A
    UBAP2LENSG00000143569.143533.577402612.283400.435704.563103.37120HepG2SERBP1
    UBAP2LENSG00000143569.147007.637009945.20160-0.505103.271702.41960HepG2SNRNP70
    UBAP2LENSG00000143569.145503.242804676.111800.234904.280303.69700HepG2SRFBP1
    UBAP2LENSG00000143569.145100.790803474.492800.5538018.7518017.74910HepG2SRSF1
    UBAP2LENSG00000143569.145402.250009616.33780-0.831907.273505.58780HepG2SRSF3
    UBAP2LENSG00000143569.144560.689904059.980800.167702.176501.70810HepG2SSB
    UBAP2LENSG00000143569.141095.096201549.74770-0.501003.491702.24320HepG2STIP1
    UBAP2LENSG00000143569.142152.229903144.58960-0.547003.764802.35750HepG2SUB1
    UBAP2LENSG00000143569.142059.332802843.59690-0.465504.007603.21610HepG2SUPV3L1
    UBAP2LENSG00000143569.142733.802203123.24620-0.192101.825801.35220HepG2TAF15
    UBAP2LENSG00000143569.142355.171902869.58670-0.285002.721501.89180HepG2TIA1
    UBAP2LENSG00000143569.144601.381203786.864800.281003.187302.24350HepG2TUFM
    UBAP2LENSG00000143569.149002.702205767.593600.6423010.637209.38520HepG2U2AF1
    UBAP2LENSG00000143569.149732.912904732.543801.040203.628102.49470HepG2U2AF2
    UBAP2LENSG00000143569.141330.097701679.78390-0.336702.382401.67760HepG2UCHL5
    UBAP2LENSG00000143569.144403.535205936.71180-0.4310012.3306011.05010HepG2UPF1
    UBAP2LENSG00000143569.141991.918502603.80130-0.386502.248701.35030HepG2UPF2
    UBAP2LENSG00000143569.145869.555606529.24660-0.153702.616402.08060HepG2ZNF622
    UBAP2LENSG00000143569.1410252.865607516.841700.4477013.7943012.63010K562AGGF1
    UBAP2LENSG00000143569.1410689.402807821.627900.450506.246805.23710K562AKAP8L
    UBAP2LENSG00000143569.149655.961008206.795900.234503.120702.14720K562ATP5C1
    UBAP2LENSG00000143569.1410529.8691014967.00690-0.507304.220603.13590K562BOP1
    UBAP2LENSG00000143569.148520.444205437.677500.647805.075303.54800K562CCAR1
    UBAP2LENSG00000143569.146896.410008982.99450-0.381405.615603.90330K562CCDC124
    UBAP2LENSG00000143569.1412602.9455015914.14460-0.336504.694603.67580K562CPSF6
    UBAP2LENSG00000143569.143816.182504481.75410-0.231903.123201.70810K562DDX27
    UBAP2LENSG00000143569.148636.293306087.839300.504405.027703.12910K562DHX30
    UBAP2LENSG00000143569.149711.987408416.547700.206402.113501.35940K562DKC1
    UBAP2LENSG00000143569.146025.467907331.54050-0.283004.601103.70260K562EIF2S2
    UBAP2LENSG00000143569.144720.849703876.995000.284003.620202.26860K562EIF4B
    UBAP2LENSG00000143569.145016.146004061.461500.304503.961001.79710K562FUBP3
    UBAP2LENSG00000143569.145417.714704477.136000.275004.183103.46150K562FXR1
    UBAP2LENSG00000143569.142885.542403938.75260-0.448903.206502.43670K562G3BP2
    UBAP2LENSG00000143569.1410762.8326015194.02910-0.497407.929106.57920K562GPKOW
    UBAP2LENSG00000143569.147384.343509769.41980-0.403806.020104.90000K562GRSF1
    UBAP2LENSG00000143569.143045.307404403.26540-0.532006.247504.33290K562HNRNPK
    UBAP2LENSG00000143569.147773.553006735.366000.206702.383501.55410K562HNRNPU
    UBAP2LENSG00000143569.149357.7583016273.31130-0.798302.759501.96550K562HSPD1
    UBAP2LENSG00000143569.1410278.036008300.655100.308203.416202.48760K562KIF1C
    UBAP2LENSG00000143569.1411494.306509298.836900.305703.568502.51580K562MBNL1
    UBAP2LENSG00000143569.148742.325706517.815400.423503.170602.21450K562NAA15
    UBAP2LENSG00000143569.147935.7181012361.13710-0.6394011.217609.56450K562PUF60
    UBAP2LENSG00000143569.1412373.149107756.813300.673605.354504.63060K562PUS1
    UBAP2LENSG00000143569.1410763.703707557.925100.5100012.2628011.01830K562RBM15
    UBAP2LENSG00000143569.143293.093004680.20380-0.507104.990203.89120K562RPS19
    UBAP2LENSG00000143569.149664.821907518.357400.362204.589903.18820K562SAFB
    UBAP2LENSG00000143569.149997.202106373.079500.649402.394601.30880K562SF1
    UBAP2LENSG00000143569.146717.900605297.954500.342503.683102.45310K562SRFBP1
    UBAP2LENSG00000143569.147218.790404413.766600.7096016.4754014.75680K562SRSF1
    UBAP2LENSG00000143569.143736.318304466.68150-0.257601.929601.33200K562TARDBP
    UBAP2LENSG00000143569.148077.391305892.092300.455004.797003.53620K562TIAL1
    UBAP2LENSG00000143569.147732.107106259.171400.304803.252702.20820K562TRIM56
    UBAP2LENSG00000143569.144739.632503942.048500.265702.858002.04160K562U2AF2
    UBAP2LENSG00000143569.143830.116904708.34880-0.297802.404301.46190K562UCHL5
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for UBAP2L is not available on ENCORE database.





    37 RBPs can affect the splicing of UBAP2L :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEUBAP2LENSG00000143569.14chr1+1542418371542418881542412321542414301542426751542430400.396000.000070.01124includedHepG2G3BP1
    SEUBAP2LENSG00000143569.14chr1+1542141751542142731542139881542140411542156921542157780.115000.000070.01098includedHepG2G3BP1
    SEUBAP2LENSG00000143569.14chr1+154214175154214273154213988154214041154215692154215778-0.059000.000000.00000excludedK562SRSF1
    SEUBAP2LENSG00000143569.14chr1+154214175154214273154213988154214041154215692154215778-0.100000.000000.00000excludedHepG2RBM22
    SEUBAP2LENSG00000143569.14chr1+154214175154214273154213988154214041154215692154215778-0.058000.000380.01473excludedK562AKAP8L
    SEUBAP2LENSG00000143569.14chr1+154207066154207268154201090154201201154207671154207767-0.062000.001240.08932excludedK562XRCC6
    SEUBAP2LENSG00000143569.14chr1+154214175154214273154213988154214041154215692154215778-0.054000.000000.00050excludedK562PUM1
    SEUBAP2LENSG00000143569.14chr1+1542141751542142731542139881542140411542156921542157780.396000.000000.00000includedHepG2HNRNPK
    SEUBAP2LENSG00000143569.14chr1+154214175154214273154213988154214041154215692154215778-0.133000.003210.03714excludedHepG2U2AF2
    SEUBAP2LENSG00000143569.14chr1+154207066154207268154201090154201201154207671154207767-0.090000.000000.00011excludedK562AQR
    SEUBAP2LENSG00000143569.14chr1+1542418371542418881542412321542414301542426751542430400.259000.000160.00939includedK562FXR1
    SEUBAP2LENSG00000143569.14chr1+1542141751542142731542139881542140411542156921542157780.133000.000070.02056includedHepG2UCHL5
    SEUBAP2LENSG00000143569.14chr1+154226375154226565154223956154224129154227311154227366-0.056000.000000.00000excludedK562PUS1
    SEUBAP2LENSG00000143569.14chr1+154214175154214273154213988154214041154215692154215778-0.118000.001670.06569excludedHepG2SFPQ
    SEUBAP2LENSG00000143569.14chr1+154241837154241888154241232154241430154242675154243040-0.289000.000050.00492excludedK562EFTUD2
    SEUBAP2LENSG00000143569.14chr1+1542418371542418881542412321542414301542426751542430400.480000.000050.00624includedHepG2HNRNPL
    SEUBAP2LENSG00000143569.14chr1+1542418371542418881542412321542414301542426751542430400.393000.000000.00002includedK562HNRNPL
    SEUBAP2LENSG00000143569.14chr1+154214175154214273154213988154214041154215692154215778-0.081000.000010.00249excludedHepG2SSB
    SEUBAP2LENSG00000143569.14chr1+154214175154214273154213988154214041154215692154215778-0.052000.001040.03526excludedK562UTP18
    SEUBAP2LENSG00000143569.14chr1+154226406154226565154223956154224129154227311154227366-0.095000.000000.00000excludedK562UTP18
    SEUBAP2LENSG00000143569.14chr1+1542355781542356601542340671542341731542389761542390440.262000.000000.00002includedK562TARDBP
    SEUBAP2LENSG00000143569.14chr1+154207066154207268154201090154201201154207671154207767-0.051000.000850.03303excludedK562TARDBP
    SEUBAP2LENSG00000143569.14chr1+154214175154214273154213988154214041154215692154215778-0.064000.000250.00914excludedK562RBM15
    SEUBAP2LENSG00000143569.14chr1+154226493154226565154223956154224129154227311154227366-0.051000.000030.00164excludedK562RBM15
    SEUBAP2LENSG00000143569.14chr1+154214175154214273154213988154214041154215692154215778-0.064000.000070.00325excludedK562AGGF1
    SEUBAP2LENSG00000143569.14chr1+1542141751542142731542139881542140411542156921542157780.158000.000000.00000includedK562HNRNPK
    SEUBAP2LENSG00000143569.14chr1+154207066154207235154201090154201201154207671154207767-0.052000.000270.05055excludedK562EIF3G
    SEUBAP2LENSG00000143569.14chr1+154214175154214273154213988154214041154215692154215778-0.066000.000260.04921excludedK562EIF3G
    SEUBAP2LENSG00000143569.14chr1+1542418371542418881542412321542414301542426751542430400.519000.000130.05464includedHepG2DROSHA
    SEUBAP2LENSG00000143569.14chr1+1542355781542356601542340671542341731542389761542390440.294000.000010.00074includedK562PTBP1
    A3SSUBAP2LENSG00000143569.14chr1+1542139551542140411542139881542140411542094991542096120.058000.000000.00000longerK562AQR
    A3SSUBAP2LENSG00000143569.14chr1+1542281401542282311542281581542282311542276001542278020.230000.000000.00000longerK562AQR
    A3SSUBAP2LENSG00000143569.14chr1+1542314191542315061542314521542315061542298211542299100.057000.000000.00000longerK562AQR
    A5SSUBAP2LENSG00000143569.14chr1+1541934421541936011541934421541935161541975591541976890.169000.000020.00071longerK562AQR
    A5SSUBAP2LENSG00000143569.14chr1+154207066154207268154207066154207235154207671154207767-0.062000.000050.00772shorterHepG2TAF15
    A5SSUBAP2LENSG00000143569.14chr1+154193360154193601154193360154193451154197559154197689-0.057000.000080.05780shorterK562WDR43
    A5SSUBAP2LENSG00000143569.14chr1+1542070661542072681542070661542072351542076711542077670.147000.000000.00000longerHepG2U2AF2
    A5SSUBAP2LENSG00000143569.14chr1+1542070661542072681542070661542072351542076711542077670.056000.000100.05956longerK562XRCC6
    A5SSUBAP2LENSG00000143569.14chr1+1541933911541936011541933911541934511541975591541976890.126000.000040.01381longerHepG2NCBP2
    A5SSUBAP2LENSG00000143569.14chr1+1542070661542072681542070661542072351542076711542077670.126000.000000.00010longerHepG2SRSF1
    A5SSUBAP2LENSG00000143569.14chr1+1542070661542072681542070661542072351542076711542077670.190000.000000.00000longerK562PRPF8
    A5SSUBAP2LENSG00000143569.14chr1+1542070661542072681542070661542072351542076711542077670.116000.000000.00077longerHepG2SF3A3
    A5SSUBAP2LENSG00000143569.14chr1+1542070661542072681542070661542072351542076711542077670.106000.000330.07223longerHepG2PCBP2
    A5SSUBAP2LENSG00000143569.14chr1+1542070661542072681542070661542072351542076711542077670.077000.000000.00000longerK562FXR1
    A5SSUBAP2LENSG00000143569.14chr1+1542070661542072681542070661542072351542076711542077670.202000.000000.00000longerK562EFTUD2
    A5SSUBAP2LENSG00000143569.14chr1+1542070661542072681542070661542072351542076711542077670.137000.000000.00109longerHepG2HNRNPUL1
    A5SSUBAP2LENSG00000143569.14chr1+1542070661542072681542070661542072351542076711542077670.179000.000040.02070longerHepG2UCHL5
    A5SSUBAP2LENSG00000143569.14chr1+154207066154207268154207066154207235154207671154207767-0.067000.000060.08026shorterK562BUD13
    A5SSUBAP2LENSG00000143569.14chr1+1541933911541936011541933911541934511541975591541976890.059000.000020.03173longerK562TIA1
    A5SSUBAP2LENSG00000143569.14chr1+1542070661542072681542070661542072351542076711542077670.074000.000010.00064longerK562SRSF1
    A5SSUBAP2LENSG00000143569.14chr1+1542070661542072681542070661542072351542076711542077670.129000.000000.00060longerHepG2U2AF1
    MXEUBAP2LENSG00000143569.14chr1+1542010901542012011542070661542072351541997571541998351542076711542077670.159000.000010.003981includedK562LARP4
    MXEUBAP2LENSG00000143569.14chr1+1542010901542012011542070661542072351541997571541998351542076711542077670.111000.004210.063581includedHepG2U2AF1
    MXEUBAP2LENSG00000143569.14chr1+154207066154207235154207671154207767154201090154201201154209041154209087-0.074000.000050.002002includedK562DROSHA
    MXEUBAP2LENSG00000143569.14chr1+1542010901542012011542070661542072351541997571541998351542076711542077700.133000.002560.040041includedK562U2AF1
    MXEUBAP2LENSG00000143569.14chr1+1542010261542012011542070661542072351541997571541998351542076711542077670.054000.000000.000051includedK562AQR
    MXEUBAP2LENSG00000143569.14chr1+1542010261542012011542070661542072681541997571541998351542076711542077670.322000.005510.039091includedK562AQR
    MXEUBAP2LENSG00000143569.14chr1+1542010091542012011542070661542072681541997571541998351542076711542077670.304000.013580.080931includedK562AQR
    MXEUBAP2LENSG00000143569.14chr1+1542076711542077671542090411542090871542010901542012011542094991542096120.061000.000000.000031includedK562AQR
    MXEUBAP2LENSG00000143569.14chr1+154218679154218851154221714154221913154215692154215778154223516154223794-0.086000.008940.057802includedK562AQR
    MXEUBAP2LENSG00000143569.14chr1+1542010901542012011542070661542072351541997571541998351542076711542077700.130000.003270.040741includedK562U2AF2
    MXEUBAP2LENSG00000143569.14chr1+154201090154201201154207066154207268154199757154199835154207671154207767-0.113000.000620.061922includedK562XRCC6
    MXEUBAP2LENSG00000143569.14chr1+1542010901542012011542070661542072681541997571541998351542076711542077670.072000.000140.052361includedK562WDR3
    MXEUBAP2LENSG00000143569.14chr1+154201090154201201154207066154207268154199757154199835154207671154207767-0.111000.002530.017672includedHepG2U2AF2
    MXEUBAP2LENSG00000143569.14chr1+1542010901542012011542070661542072681541997571541998351542076711542077670.068000.000120.036061includedK562UPF1
    MXEUBAP2LENSG00000143569.14chr1+1542010901542012011542070661542072351541997571541998351542076711542077670.203000.000220.012191includedK562DDX55

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for UBAP2L is not avaliable on ENCORE database.