SCAF4

General Information

Gene Name       : SCAF4
Gene ID             : ENSG00000156304.14
Essential Gene : No

Functions

Localization(RBPImage: SCAF4)

Domains (AlphaFold: SCAF4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SCAF4ENSG00000156304.1424.6923.6124.15ENCSR000AEF
HepG2SCAF4ENSG00000156304.1418.8319.6619.24ENCSR985KAT
K562SCAF4ENSG00000156304.1431.9232.4232.17ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    SCAF4: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Mutually Exclusive from Nucleolus
  • Cytoplasm
  • Compartment/Organelle
  • Mitochondria












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








    RNA Targets

    • eCLIP assay for SCAF4 is not avaliable on ENCORE database.



    Proteins bound to RNA
    • SCAF4 RNA is bound by 41 proteins.  







    eCLIP assay for SCAF4 is not avaliable on ENCORE database.





    41 proteins are bound to SCAF4 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr213304351533043568-3'-UTR,intron-Distal,intron-Proximal5.2356910.91695K562PABPC4
    chr213304358233043643-3'-UTR,intron-Distal5.95005400.00000K562PUM2
    chr213304347533043515-3'-UTR,intron-Distal,intron-Proximal4.747057.67996K562PABPC4
    chr213304364333043694-3'-UTR,intron-Distal6.1626780.23406K562PUM2
    chr213310400633104040-5'-UTR,intron-Distal4.5227715.35207K562RBM15
    chr213310428933104361-5'-UTR,intron-Distal,intron-Proximal3.562385.11891HepG2GRWD1
    chr213310417733104272-5'-UTR,intron-Distal3.227086.56666K562YBX3
    chr213310429333104373-5'-UTR,intron-Distal,intron-Proximal3.1799816.78587K562ZNF622
    chr213310427833104332-5'-UTR,intron-Distal,intron-Proximal4.072105.56074HepG2NCBP2
    chr213310427633104374-5'-UTR,intron-Distal,intron-Proximal3.357045.01245HepG2DDX3X
    chr213310422833104234-5'-UTR,intron-Distal3.267635.13929K562RBM15
    chr213310433233104381-5'-UTR,intron-Distal,intron-Proximal3.962637.16836HepG2NCBP2
    chr213310404033104047-5'-UTR,intron-Distal4.8727615.25706K562RBM15
    chr213310433433104372-5'-UTR,intron-Distal,intron-Proximal3.514567.32655K562UCHL5
    chr213310416533104228-5'-UTR,intron-Distal3.8698411.89781K562RBM15
    chr213306576133065784-CDS,intron-Distal4.499636.44474K562YBX3
    chr213306420933064251-CDS,intron-Distal,intron-Proximal3.668547.55775HepG2U2AF2
    chr213306321033063261-CDS,intron-Distal3.9285013.15863K562DDX24
    chr213307346833073483-CDS,intron-Distal3.858773.25872K562IGF2BP1
    chr213307768733077737-CDS,intron-Distal,intron-Proximal3.469215.28960K562AQR
    chr213307408733074131-CDS,intron-Distal,intron-Proximal4.225793.98716K562IGF2BP1
    chr213307771233077764-CDS,intron-Distal,intron-Proximal4.256273.59236HepG2AQR
    chr213307342933073519-CDS,intron-Distal,intron-Proximal3.316065.40420HepG2AQR
    chr213306413133064211-CDS,intron-Distal3.389799.86954HepG2BCLAF1
    chr213304391533043987-CDS,intron-Distal3.908933.02060K562LIN28B
    chr213305799433058061-CDS,intron-Distal,intron-Proximal3.179576.52492K562SF3B4
    chr213306712533067187-CDS,intron-Distal,intron-Proximal3.1363821.23108K562ZNF622
    chr213307607733076192-CDS,intron-Distal,intron-Proximal3.712719.41803HepG2BCLAF1
    chr213306469233064764-CDS,intron-Distal,intron-Proximal3.118416.89863K562BUD13
    chr213307467133074692-CDS,intron-Distal3.461055.77496K562DDX24
    chr213304420133044378-CDS,intron-Distal4.172048.25524K562IGF2BP2
    chr213306470333064763-CDS,intron-Distal,intron-Proximal3.551175.51930HepG2U2AF1
    chr213305775733057797-CDS,intron-Distal,intron-Proximal3.2761216.93862K562DDX24
    chr213306651633066570-CDS,intron-Distal,intron-Proximal3.3019012.62988K562DDX24
    chr213306061733060668-CDS,intron-Distal,intron-Proximal3.800039.08790HepG2BCLAF1
    chr213306468933064736-CDS,intron-Distal3.693596.28780K562DDX24
    chr213307330733073360-CDS,intron-Distal,intron-Proximal3.327376.02070K562IGF2BP1
    chr213306061633060697-CDS,intron-Distal,intron-Proximal3.436353.95118HepG2PCBP2
    chr213305751833057553-CDS,intron-Distal,intron-Proximal5.320097.60619K562UCHL5
    chr213306311033063210-CDS,intron-Distal,intron-Proximal4.7288725.97118K562DDX24
    chr213306470233064766-CDS,intron-Distal,intron-Proximal4.1656315.08123HepG2U2AF2
    chr213307331233073352-CDS,intron-Distal4.0350412.23733K562ZNF622
    chr213304447133044526-CDS,intron-Distal4.488745.04042K562IGF2BP2
    chr213307338133073468-CDS,intron-Distal3.5119014.28072K562IGF2BP1
    chr213306416333064215-CDS,intron-Distal4.4557312.12719K562DDX24
    chr213305770933057757-CDS,intron-Distal,intron-Proximal3.3691319.61144K562DDX24
    chr213305744333057509-CDS,intron-Distal,intron-Proximal3.257166.39923HepG2BCLAF1
    chr213306323433063267-CDS,intron-Distal,intron-Proximal4.348817.16838HepG2BCLAF1
    chr213306652733066603-CDS,intron-Distal,intron-Proximal3.761054.03691K562PUM1
    chr213306070233060754-CDS,intron-Distal3.396477.13168HepG2BCLAF1
    chr213306316133063199-CDS,intron-Distal3.286928.68700K562ZNF622
    chr213306577833065828-CDS,intron-Distal,intron-Proximal3.732067.15738HepG2U2AF2
    chr213307409533074116-CDS,intron-Distal3.666568.01252K562ZNF622
    chr213307335833073468-CDS,intron-Distal3.894095.10201HepG2IGF2BP1
    chr213307862533078670-CDS,intron-Distal4.499144.64001HepG2U2AF2
    chr213306652433066543-CDS,intron-Distal3.203703.94979HepG2BCLAF1
    chr213307450433074611-CDS,intron-Distal,intron-Proximal3.819034.54206HepG2PRPF8
    chr213306653633066565-CDS,intron-Distal4.2451812.58499K562ZNF622
    chr213307859633078661-CDS,intron-Distal3.399144.45064HepG2GRWD1
    chr213306470333064766-CDS,intron-Distal,intron-Proximal3.558586.71444K562U2AF1
    chr213306579133065870-CDS,intron-Distal,intron-Proximal3.730686.67015HepG2KHSRP
    chr213306712533067166-CDS,intron-Distal,intron-Proximal3.0853612.69917K562DDX24
    chr213305775733057800-CDS,intron-Distal,intron-Proximal3.325894.35314HepG2U2AF2
    chr213306310833063162-CDS,intron-Distal,intron-Proximal3.2723612.09654HepG2BCLAF1
    chr213306070333060750-CDS,intron-Distal3.413538.15265K562UCHL5
    chr213307415933074196-CDS,intron-Distal,intron-Proximal3.146146.75313K562DDX24
    chr213304435333044410-CDS,intron-Distal5.1260212.12312K562RBM15
    chr213305744333057499-CDS,intron-Distal,intron-Proximal3.289138.13987K562DDX24
    chr213305794633057962-CDS,intron-Distal3.887365.38772K562RBM15
    chr213310393533103978-CDS,intron-Distal4.422564.92499HepG2AQR
    chr213306555233065608-CDS,intron-Distal,intron-Proximal4.6668414.40768K562AQR
    chr213306316233063184-CDS,intron-Distal3.004345.79926HepG2BCLAF1
    chr213306578933065851-CDS,intron-Distal,intron-Proximal3.8209015.54037K562KHSRP
    chr213306889633068983-CDS,intron-Distal3.336456.81398K562IGF2BP2
    chr213307463533074693-CDS,intron-Distal,intron-Proximal3.259397.43909HepG2BCLAF1
    chr213305774233057798-CDS,intron-Distal,intron-Proximal3.469997.61825K562U2AF2
    chr213306412933064135-CDS,intron-Distal,intron-Proximal3.654284.50825K562DDX24
    chr213305791733057946-CDS,intron-Distal4.023586.04229K562RBM15
    chr213307466133074684-CDS,intron-Distal3.1633413.73403K562ZNF622
    chr213305787933057904-CDS,intron-Distal,intron-Proximal3.5397013.11799K562DDX24
    chr213306578433065795-CDS,intron-Distal3.220614.29172K562YBX3
    chr213306469533064765-CDS,intron-Distal,intron-Proximal3.778256.60530K562U2AF2
    chr213306842833068485-CDS,intron-Distal3.6932913.77091K562DDX24
    chr213305790733057917-CDS,intron-Distal3.770963.34231K562RBM15
    chr213307607733076095-CDS,intron-Distal,intron-Proximal3.4718512.48200K562ZNF622
    chr213306413333064207-CDS,intron-Distal3.284873.99124HepG2PPIG
    chr213307468433074692-CDS,intron-Distal3.0864911.51636K562ZNF622
    chr213307859033078616-CDS,intron-Distal3.453596.11414K562BUD13
    chr213307342433073491-CDS,intron-Distal,intron-Proximal3.614507.53508HepG2BUD13
    chr213306579233065796-CDS,intron-Distal3.829536.80284K562DDX24
    chr213306318433063234-CDS,intron-Distal5.0431713.83301HepG2BCLAF1
    chr213306467833064758-CDS,intron-Distal,intron-Proximal4.7270922.82818K562ZNF622
    chr213306656533066580-CDS,intron-Distal3.8021111.42258K562ZNF622
    chr213307451033074520-intron-Distal,intron-Proximal4.8441810.60410K562AQR
    chr213306488733064908-intron-Distal3.301136.92889K562KHSRP
    chr213305379633053835-intron-Distal3.333795.23331K562KHSRP
    chr213310341133103524-intron-Distal3.573335.64759K562NONO
    chr213307846033078523-intron-Distal,intron-Proximal3.130954.21588K562PRPF8
    chr213310391633103964-intron-Distal5.145078.63033K562RBM15
    chr213306457933064637-intron-Distal,intron-Proximal3.997756.18635K562TIA1
    chr213305806133058102-intron-Distal,intron-Proximal4.749154.26208K562SF3B4
    chr213306546033065489-intron-Distal4.6309020.55096K562KHSRP
    chr213306580233065836-intron-Distal,intron-Proximal3.319393.04045K562U2AF2
    chr213307407333074089-intron-Distal,intron-Proximal3.886669.84476K562AQR
    chr213305370833053838-intron-Distal3.990375.56216HepG2KHSRP
    chr213306056033060620-intron-Distal,intron-Proximal4.253896.48405K562AQR
    chr213306551833065541-intron-Distal,intron-Proximal5.4170719.94575K562KHSRP
    chr213310382133103876-intron-Distal3.736934.51666K562RBM15
    chr213306832433068385-intron-Distal,intron-Proximal3.008394.34900K562PRPF8
    chr213306502733065120-intron-Distal5.7175410.14519HepG2XPO5
    chr213306054833060618-intron-Distal,intron-Proximal3.684883.88924K562PRPF8
    chr213306429133064366-intron-Distal,intron-Proximal4.348479.59273HepG2KHSRP
    chr213310381333103904-intron-Distal4.155836.76093K562XRN2
    chr213306455833064628-intron-Distal,intron-Proximal3.929785.59842HepG2KHSRP
    chr213305370033053796-intron-Distal4.8500421.43316K562KHSRP
    chr213305368433053794-intron-Distal5.423818.96694K562CPSF6
    chr213308926133089311-intron-Distal3.290939.06665K562KHSRP
    chr213306704833067108-intron-Distal,intron-Proximal4.284596.48405K562AQR
    chr213305566533055718-intron-Distal3.459783.27276HepG2HNRNPL
    chr213306551433065552-intron-Distal,intron-Proximal5.264276.75320K562AQR
    chr213305464533054695-intron-Distal3.253014.28038HepG2HNRNPC
    chr213306550033065572-intron-Distal,intron-Proximal4.247668.78208HepG2KHSRP
    chr213310380633103861-intron-Distal4.789254.33932HepG2XRN2
    chr213307853833078582-intron-Distal,intron-Proximal5.118605.17615K562AQR
    chr213306585133065871-intron-Distal,intron-Proximal3.616819.68785K562KHSRP
    chr213309104033091100-intron-Distal3.088787.30615K562KHSRP
    chr213306834933068426-intron-Distal,intron-Proximal3.3871810.34961K562AQR
    chr213307242533072505-intron-Distal3.411045.72074K562TARDBP
    chr213306554133065572-intron-Distal,intron-Proximal6.2168015.87225K562KHSRP
    chr213306637033066412-intron-Distal3.342856.87041K562KHSRP
    chr213306429633064349-intron-Distal,intron-Proximal3.833936.29610HepG2RBFOX2
    chr213306458033064615-intron-Distal,intron-Proximal5.8225827.76650K562KHSRP
    chr213305760433057671-intron-Distal,intron-Proximal3.884104.21913K562EFTUD2
    chr213307135433071441-intron-Distal3.666093.43083K562QKI
    chr213307404333074073-intron-Distal,intron-Proximal4.2611314.76150K562AQR
    chr213307450633074556-intron-Distal,intron-Proximal4.103136.75234K562PRPF8
    chr213306539733065460-intron-Distal4.6881620.74809K562KHSRP
    chr213310381533103861-intron-Distal3.981883.53896K562NONO
    chr213305763033057701-intron-Distal,intron-Proximal5.564157.41664HepG2EFTUD2
    chr213309739133097474-intron-Distal3.288133.68481HepG2HNRNPM
    chr213306553633065592-intron-Distal,intron-Proximal3.990883.88726HepG2TIAL1
    chr213308749433087582-intron-Distal4.659853.48757K562TRA2A
    chr213305764233057695-intron-Distal,intron-Proximal4.346025.97994K562AQR
    chr213306592633065959-intron-Distal3.041263.06355HepG2KHSRP
    chr213306548933065518-intron-Distal,intron-Proximal4.3550314.89285K562KHSRP
    chr213309675233096811-intron-Distal4.163874.71638K562HNRNPL
    chr213306438433064438-intron-Distal4.0794912.50932K562KHSRP
    chr213306882033068862-intron-Distal,intron-Proximal4.066314.15711K562AQR
    chr213306539633065483-intron-Distal3.9975310.04211HepG2KHSRP
    chr213307847233078533-intron-Distal,intron-Proximal3.509228.38394K562AQR
    chr213306483133064887-intron-Distal,intron-Proximal4.3525718.34983K562KHSRP
    chr213308612533086184-intron-Distal4.497596.09994K562KHSRP
    chr213309118033091242-intron-Distal3.818507.26586K562KHSRP
    chr213307321133073295-intron-Distal,intron-Proximal3.447084.98422K562PRPF8
    chr213306435433064384-intron-Distal3.568777.79401K562KHSRP
    chr213306552233065592-intron-Distal,intron-Proximal4.366174.22101K562PRPF8
    chr213305180133051860-intron-Distal3.503844.95320HepG2U2AF2
    chr213307452033074556-intron-Distal,intron-Proximal4.254598.79285K562AQR
    chr213308009533080167-intron-Distal3.120296.42458K562KHSRP
    chr213306455233064580-intron-Distal,intron-Proximal4.6730313.78233K562KHSRP
    chr213308920633089261-intron-Distal3.100607.20875K562KHSRP
    chr213308080433080881-intron-Distal3.894037.77021K562KHSRP
    chr213308884433088899-intron-Distal3.535324.70224K562KHSRP
    chr213307086633070927-intron-Distal3.297268.28204K562HNRNPL
    chr213305359133053673-intron-Distal5.0579820.01680HepG2CSTF2
    chr213306426833064314-intron-Distal,intron-Proximal6.0546439.38848K562KHSRP
    chr213306484333064896-intron-Distal,intron-Proximal4.706236.73345HepG2KHSRP
    chr213307321633073280-intron-Distal,intron-Proximal5.318035.70963K562RBM22
    chr213307867733078725-intron-Distal,intron-Proximal4.069207.80703K562SF3B4
    chr213305716733057243-intron-Distal3.565805.64972K562TIA1
    chr213308075233080804-intron-Distal3.942567.90970K562KHSRP
    chr213306450933064552-intron-Distal4.3173210.83474K562KHSRP
    chr213310392833103964-intron-Distal3.547388.17562K562AQR
    chr213306431433064354-intron-Distal,intron-Proximal5.0777731.61309K562KHSRP
    chr213306461533064644-intron-Distal,intron-Proximal4.6243220.77386K562KHSRP
    chr213307136733071488-intron-Distal3.229856.60828HepG2QKI
    chr213305716033057210-intron-Distal3.308437.07647K562PRPF8
    chr213307435333074400-intron-Distal4.291914.48843K562TIA1
    chr213307595033076014-intron-Distal,intron-Proximal3.151004.14287K562KHSRP
    chr213307401133074043-intron-Distal,intron-Proximal3.521566.87160K562AQR
    chr213305358133053675-intron-Distal4.5215713.92781K562CSTF2T
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    eCLIP assay for SCAF4 is not avaliable on ENCORE database.



    Diffrential Expression

    • The Knockdown/knockout assay for SCAF4 is not available on ENCORE database.

    • 88 RBPs can affect the levels of SCAF4.  








    The Knockdown/knockout RNA-Seq assay for SCAF4 is not available on ENCORE database.





    88 RBPs can affect the gene expression of SCAF4 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    SCAF4ENSG00000156304.101750.159302344.78980-0.422003.374802.33900HepG2ABCF1
    SCAF4ENSG00000156304.10553.965401110.12480-1.0029011.1880010.18690HepG2AKAP1
    SCAF4ENSG00000156304.101376.337701874.22490-0.445503.568202.39190HepG2AKAP8
    SCAF4ENSG00000156304.101291.425901771.40460-0.455907.723606.66900HepG2AUH
    SCAF4ENSG00000156304.101326.288301751.76800-0.401404.531403.57580HepG2CALR
    SCAF4ENSG00000156304.101058.503601456.67110-0.460608.611307.41410HepG2DAZAP1
    SCAF4ENSG00000156304.10614.34880904.87810-0.558703.886202.98540HepG2DDX55
    SCAF4ENSG00000156304.101561.019202032.69860-0.380903.255502.16670HepG2DDX5
    SCAF4ENSG00000156304.10817.224901223.36020-0.582009.673608.56530HepG2DKC1
    SCAF4ENSG00000156304.10849.024501008.07790-0.247701.923601.32580HepG2DNAJC21
    SCAF4ENSG00000156304.101438.421801778.66890-0.306302.676601.52930HepG2EIF2S2
    SCAF4ENSG00000156304.101761.208202033.82170-0.207602.037001.50380HepG2ETF1
    SCAF4ENSG00000156304.101887.444302367.65930-0.327002.091001.41730HepG2FIP1L1
    SCAF4ENSG00000156304.101395.67950910.025600.616907.575606.31180HepG2FUBP3
    SCAF4ENSG00000156304.101236.89390964.441700.358902.395101.56710HepG2G3BP2
    SCAF4ENSG00000156304.10485.29450885.57590-0.8678010.015508.04500HepG2GNB2L1
    SCAF4ENSG00000156304.101215.63910920.054100.401803.091502.35480HepG2HNRNPK
    SCAF4ENSG00000156304.101955.486002407.42210-0.300002.214301.64460HepG2HNRNPLL
    SCAF4ENSG00000156304.101276.559901633.53990-0.355703.434302.38300HepG2HNRNPM
    SCAF4ENSG00000156304.10939.945301124.58130-0.258702.561601.97800HepG2HNRNPU
    SCAF4ENSG00000156304.101452.20200979.618200.567905.216204.32110HepG2MAGOH
    SCAF4ENSG00000156304.101537.83620985.055300.642505.880904.98720HepG2MATR3
    SCAF4ENSG00000156304.101340.460101008.221700.410802.811702.17360HepG2NCBP2
    SCAF4ENSG00000156304.101282.54140992.341100.370004.758403.99800HepG2PCBP1
    SCAF4ENSG00000156304.101115.691401378.84120-0.305502.137701.60440HepG2PUF60
    SCAF4ENSG00000156304.101255.782401463.70500-0.221002.627602.04640HepG2PUM1
    SCAF4ENSG00000156304.101233.583801699.89600-0.462607.026006.28970HepG2RBM22
    SCAF4ENSG00000156304.101361.389101046.685700.379204.988704.19110HepG2RECQL
    SCAF4ENSG00000156304.101330.956801633.15140-0.295202.437501.78940HepG2RPLP0
    SCAF4ENSG00000156304.101297.568201051.245700.303603.279602.64200HepG2SF3B4
    SCAF4ENSG00000156304.10749.56570892.73620-0.252202.071001.57920HepG2SRSF9
    SCAF4ENSG00000156304.101322.178901666.97680-0.334304.672504.04120HepG2SSB
    SCAF4ENSG00000156304.10676.07460900.78860-0.414002.380701.74690HepG2SUPV3L1
    SCAF4ENSG00000156304.101099.85040906.261200.279202.197501.45000HepG2TIA1
    SCAF4ENSG00000156304.102632.883602025.339400.378403.290002.60980HepG2U2AF1
    SCAF4ENSG00000156304.101812.179302096.37480-0.210202.470801.80480HepG2UPF1
    SCAF4ENSG00000156304.102571.406002023.964300.345306.282605.44000HepG2UTP3
    SCAF4ENSG00000156304.101420.776701738.62480-0.291304.316303.50720HepG2ZC3H8
    SCAF4ENSG00000156304.101916.151602305.60800-0.266903.399402.81080HepG2ZNF622
    SCAF4ENSG00000156304.104812.828006243.26540-0.375403.136501.82170K562ABCF1
    SCAF4ENSG00000156304.108803.621405195.309000.7608014.1081012.92970K562AGGF1
    SCAF4ENSG00000156304.109128.825105406.106800.755707.881006.72550K562AKAP8L
    SCAF4ENSG00000156304.106445.844804119.567800.645809.089308.12490K562AQR
    SCAF4ENSG00000156304.107817.516905672.595200.462602.576301.69690K562ATP5C1
    SCAF4ENSG00000156304.103183.290202261.432700.493205.653404.00390K562CCAR1
    SCAF4ENSG00000156304.103930.097404942.31090-0.330604.076103.12470K562CPSF6
    SCAF4ENSG00000156304.106978.031406035.223500.209302.890402.22420K562DDX47
    SCAF4ENSG00000156304.101947.334403041.11900-0.6431016.1388014.61420K562EIF2S2
    SCAF4ENSG00000156304.103097.253702300.242700.429102.356801.43540K562EIF3A
    SCAF4ENSG00000156304.102841.782702100.981400.435603.362902.21480K562EIF3D
    SCAF4ENSG00000156304.101898.971501566.908500.277202.771001.97350K562EIF3G
    SCAF4ENSG00000156304.102627.529502002.731900.391602.838301.52840K562EWSR1
    SCAF4ENSG00000156304.104216.015805028.89920-0.254402.087101.33950K562FMR1
    SCAF4ENSG00000156304.101899.403301385.259900.455306.289704.16690K562FUS
    SCAF4ENSG00000156304.102773.331102106.890700.396404.480602.61500K562G3BP1
    SCAF4ENSG00000156304.104922.039404215.925500.223302.561701.46650K562GLRX3
    SCAF4ENSG00000156304.103900.026504718.60170-0.274902.592001.82250K562GPKOW
    SCAF4ENSG00000156304.103048.227904052.50330-0.410805.420304.35860K562GRSF1
    SCAF4ENSG00000156304.1010823.792604646.676801.219809.054506.41220K562HNRNPA2B1
    SCAF4ENSG00000156304.103022.629602494.972000.276702.510001.43270K562HNRNPF
    SCAF4ENSG00000156304.102771.666303690.76860-0.413203.539602.47360K562HNRNPM
    SCAF4ENSG00000156304.103618.198506084.35660-0.749809.011107.58950K562HSPD1
    SCAF4ENSG00000156304.109246.952105736.696700.688706.853905.41740K562KIF1C
    SCAF4ENSG00000156304.103616.564102833.794900.351803.050001.50770K562LIN28B
    SCAF4ENSG00000156304.109533.800804504.644801.0815012.9000010.50090K562NAA15
    SCAF4ENSG00000156304.105832.235304924.890700.243906.532805.45090K562NSUN2
    SCAF4ENSG00000156304.103480.556802750.934500.339302.870201.41270K562NUSAP1
    SCAF4ENSG00000156304.109135.087804062.381601.169003.517302.36240K562PABPN1
    SCAF4ENSG00000156304.102826.450302263.704900.320203.448501.93500K562PCBP1
    SCAF4ENSG00000156304.102722.762202060.800500.401804.356503.12310K562PCBP2
    SCAF4ENSG00000156304.103572.997902727.689700.389403.477301.85280K562PHF6
    SCAF4ENSG00000156304.103857.356805093.82130-0.401103.899402.90040K562PPIG
    SCAF4ENSG00000156304.108646.252804827.612100.840703.720401.94190K562PPP1R8
    SCAF4ENSG00000156304.102588.908101909.672600.438904.287503.35590K562PRPF8
    SCAF4ENSG00000156304.105334.545206559.29550-0.298203.806402.67720K562PUM2
    SCAF4ENSG00000156304.1015262.758105360.285801.5095040.3719038.24790K562PUS1
    SCAF4ENSG00000156304.1010729.763105223.693201.0384032.4597030.34230K562RBM15
    SCAF4ENSG00000156304.103213.746702058.056000.642903.975802.33670K562RBM25
    SCAF4ENSG00000156304.103313.562202285.610900.535708.864407.08060K562RCC2
    SCAF4ENSG00000156304.101945.676201543.227200.334204.976702.86740K562RPS10
    SCAF4ENSG00000156304.104256.337303413.236600.318402.776601.33070K562SDAD1
    SCAF4ENSG00000156304.103423.400802256.454300.6013010.042008.36650K562SF3B4
    SCAF4ENSG00000156304.102113.784101605.213000.397004.542702.27600K562SLTM
    SCAF4ENSG00000156304.1012330.426604267.127101.530808.474005.88590K562SNRNP200
    SCAF4ENSG00000156304.102884.817902166.680300.412904.567303.15820K562SRFBP1
    SCAF4ENSG00000156304.106592.941904978.796800.4050013.2216011.38000K562SRPK2
    SCAF4ENSG00000156304.104394.162903498.813300.328605.227403.60050K562SRSF7
    SCAF4ENSG00000156304.105303.419104216.818800.330704.292202.37920K562SRSF9
    SCAF4ENSG00000156304.103896.735002559.781300.606109.214107.26510K562TRIM56
    SCAF4ENSG00000156304.104752.110403511.712700.436303.574201.54370K562TRNAU1AP
    SCAF4ENSG00000156304.103310.652702103.159600.654506.304004.51170K562U2AF1
    SCAF4ENSG00000156304.103364.947002172.697300.631009.126907.66000K562U2AF2
    SCAF4ENSG00000156304.104580.633105221.96710-0.189002.805402.08250K562UPF1
    SCAF4ENSG00000156304.103901.111003007.761800.375104.499502.36180K562UPF2
    SCAF4ENSG00000156304.105736.168304468.270700.360303.613302.61380K562WDR3
    SCAF4ENSG00000156304.106073.062404646.494300.3862010.664809.12970K562WDR43
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for SCAF4 is not available on ENCORE database.





    17 RBPs can affect the splicing of SCAF4 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SESCAF4ENSG00000156304.10chr21-330777353307778033076077330762393307858633078670-0.201000.000000.00004excludedK562SF3B4
    SESCAF4ENSG00000156304.10chr21-330733073307348433068881330690633307408833074256-0.117000.000000.00003excludedHepG2U2AF1
    SESCAF4ENSG00000156304.10chr21-330733073307348433068889330690633307408833074231-0.085000.000000.00000excludedK562AKAP8L
    SESCAF4ENSG00000156304.10chr21-330733073307348433068881330690633307408833074231-0.192000.000000.00000excludedHepG2U2AF2
    SESCAF4ENSG00000156304.10chr21-330733073307348433068881330690633307408833074231-0.085000.000000.00000excludedK562AQR
    SESCAF4ENSG00000156304.10chr21-330777353307778033076077330762393307858633078670-0.172000.000000.00000excludedK562AQR
    SESCAF4ENSG00000156304.10chr21-3307330733073484330688813306906333074088330742310.108000.000000.00018includedK562FXR1
    SESCAF4ENSG00000156304.10chr21-330777353307778033076077330762393307858633078670-0.133000.000000.00000excludedK562PUS1
    SESCAF4ENSG00000156304.10chr21-330733073307348433068881330690633307408833074231-0.107000.000000.00000excludedK562PUS1
    SESCAF4ENSG00000156304.10chr21-330733073307347533068881330690633307408833074231-0.104000.000050.01719excludedK562LARP4
    SESCAF4ENSG00000156304.10chr21-330777353307778033076077330762393307858633078670-0.260000.000000.00000excludedK562U2AF1
    SESCAF4ENSG00000156304.10chr21-330733073307348433068881330690633307408833074231-0.143000.000020.00098excludedK562U2AF1
    SESCAF4ENSG00000156304.10chr21-330733073307347833068881330690633307408833074231-0.094000.000280.02703excludedK562HNRNPUL1
    SESCAF4ENSG00000156304.10chr21-330733073307348433068881330690633307408833074231-0.087000.000000.00005excludedK562SRSF7
    SESCAF4ENSG00000156304.10chr21-330777353307778033076077330762393307858633078670-0.129000.000000.00001excludedK562UTP18
    SESCAF4ENSG00000156304.10chr21-330733073307348433068889330690633307408833074231-0.153000.000000.00000excludedK562UTP18
    SESCAF4ENSG00000156304.10chr21-330777353307778033076077330762393307858633078670-0.288000.000000.00000excludedK562U2AF2
    SESCAF4ENSG00000156304.10chr21-330733073307348433068881330690633307408833074231-0.279000.000000.00000excludedK562U2AF2
    SESCAF4ENSG00000156304.10chr21-330777353307778033076077330762393307858633078670-0.103000.000010.00049excludedK562RBM15
    SESCAF4ENSG00000156304.10chr21-330733073307348433068881330690633307408833074231-0.088000.000000.00000excludedK562RBM15
    SESCAF4ENSG00000156304.10chr21-330777353307778033076077330762393307858633078670-0.107000.000000.00028excludedK562AGGF1
    SESCAF4ENSG00000156304.10chr21-330733073307348433068889330690633307408833074231-0.103000.000000.00000excludedK562AGGF1
    A3SSSCAF4ENSG00000156304.10chr21-3305736133057553330573613305748733057710330577970.114000.000000.00027longerK562AKAP8L
    A3SSSCAF4ENSG00000156304.10chr21-3306842533068590330684253306853433068881330690630.095000.000000.00000longerK562AQR
    A3SSSCAF4ENSG00000156304.10chr21-3306412933064345330641293306424333064661330647620.054000.000050.00047longerK562AQR
    A3SSSCAF4ENSG00000156304.10chr21-3307408833074302330740883307423133074556330746920.096000.000000.00000longerK562AQR
    A3SSSCAF4ENSG00000156304.10chr21-3305736133057553330573613305748733057710330577970.086000.004420.02594longerK562AQR
    A3SSSCAF4ENSG00000156304.10chr21-330733073307353233073307330734753307408833074285-0.066000.000440.00330shorterK562AQR
    A3SSSCAF4ENSG00000156304.10chr21-3305736133057553330573613305748733057710330577970.081000.000850.08815longerK562RBM15
    A3SSSCAF4ENSG00000156304.10chr21-330573613305755333057361330574873305771033057797-0.179000.000030.00416shorterK562SRSF1
    A3SSSCAF4ENSG00000156304.10chr21-330574383305755333057438330574873305771033057797-0.205000.000120.01961shorterK562HNRNPC
    A3SSSCAF4ENSG00000156304.10chr21-330573613305755333057361330574873305771033057797-0.204000.000010.04253shorterK562DDX55
    MXESCAF4ENSG00000156304.10chr21-3306072633060777330631093306326633057880330580463306412933064243-0.072000.000070.002432includedK562PUS1
    MXESCAF4ENSG00000156304.10chr21-3306061933060777330631093306326633057880330580463306412933064243-0.097000.000280.014642includedK562AGGF1
    MXESCAF4ENSG00000156304.10chr21-3305788033058046330606193306077733057710330577973306310933063266-0.102000.001260.086042includedK562PUM1

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for SCAF4 is not avaliable on ENCORE database.