SMG1

General Information

Gene Name       : SMG1
Gene ID             : ENSG00000157106.16
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SMG1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SMG1ENSG00000157106.1631.2630.4630.86ENCSR000AEF
HepG2SMG1ENSG00000157106.1630.7740.6735.72ENCSR985KAT
K562SMG1ENSG00000157106.1620.4521.5220.98ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
SMG1K562CRISPRBGKcLV23-59,BGKcLV23-60BGKcLV23-1,BGKcLV23-2NotSatisfiedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SMG1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SMG1 RNA is bound by 42 proteins.  







eCLIP assay for SMG1 is not avaliable on ENCORE database.





42 proteins are bound to SMG1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr161881803218818108-3'-UTR,intron-Distal4.6126250.72455HepG2PCBP2
chr161888733018887385-3'-UTR,intron-Distal,intron-Proximal3.270095.19836HepG2U2AF2
chr161882087518820938-3'-UTR,CDS,intron-Distal3.686478.48758HepG2EIF3H
chr161882085218820931-3'-UTR,CDS,intron-Distal3.201786.65206HepG2EIF3D
chr161882053818820634-3'-UTR,intron-Distal4.334914.20997HepG2UPF1
chr161888732518887395-3'-UTR,intron-Distal,intron-Proximal3.916466.19377K562KHSRP
chr161881899818819064-3'-UTR,intron-Distal,intron-Proximal3.233675.56158K562FAM120A
chr161881635818816403-3'-UTR,intron-Distal4.440587.45604K562PUM2
chr161882085618820934-3'-UTR,CDS,intron-Distal3.025585.69310HepG2HLTF
chr161881787918817916-3'-UTR,intron-Distal3.067023.92154HepG2HNRNPM
chr161881857018818613-3'-UTR,intron-Distal3.664073.19539K562YBX3
chr161881636618816449-3'-UTR,intron-Distal4.444504.76744HepG2LSM11
chr161881729318817337-3'-UTR,intron-Distal3.493329.03676K562PUM2
chr161882065818820796-3'-UTR,intron-Distal3.183265.68066HepG2EIF3H
chr161882016918820279-3'-UTR,intron-Distal5.2678943.61375HepG2PCBP2
chr161881630318816366-3'-UTR,intron-Distal4.057033.18535HepG2LSM11
chr161881784318817872-3'-UTR,intron-Distal3.008644.23271HepG2HNRNPM
chr161881637018816462-3'-UTR,intron-Distal3.234173.37074K562TIA1
chr161882066818820755-3'-UTR,intron-Distal3.149367.10982HepG2GRWD1
chr161887804618878077-3'-UTR,CDS,intron-Distal5.602549.32793HepG2BCLAF1
chr161882064818820780-3'-UTR,intron-Distal3.412286.24912HepG2UPF1
chr161881769718817784-3'-UTR,intron-Distal3.9771713.24316HepG2HNRNPM
chr161882037418820407-3'-UTR,intron-Distal3.662098.99805HepG2BCLAF1
chr161882082918820867-3'-UTR,intron-Distal3.830389.83905HepG2BCLAF1
chr161881898718819067-3'-UTR,intron-Distal,intron-Proximal3.018156.48920K562UPF1
chr161881641518816458-3'-UTR,intron-Distal3.266453.46578HepG2ZC3H11A
chr161882009518820174-3'-UTR,intron-Distal4.400004.20872K562IGF2BP1
chr161893730418937365-5'-UTR,CDS,intron-Distal,intron-Proximal3.090336.13886HepG2EIF3H
chr161893727418937302-5'-UTR,CDS,intron-Distal3.430963.93645HepG2PPIG
chr161893741518937527-5'-UTR,intron-Distal,intron-Proximal3.145423.87462HepG2PCBP2
chr161893762618937723-5'-UTR,intron-Distal3.5533514.05133HepG2DDX3X
chr161893701018937097-5'-UTR,intron-Distal,intron-Proximal3.462396.80152HepG2NKRF
chr161893729618937386-5'-UTR,CDS,intron-Distal,intron-Proximal3.086085.60408HepG2ZNF800
chr161884781218847855-CDS,intron-Distal,intron-Proximal3.381557.50303K562UCHL5
chr161882330918823380-CDS,intron-Distal,intron-Proximal3.5438113.35189HepG2BCLAF1
chr161884933218849360-CDS,intron-Distal,intron-Proximal3.076134.00731K562UCHL5
chr161884426518844289-CDS,intron-Distal3.1969712.32425HepG2BCLAF1
chr161884124718841266-CDS,intron-Distal,intron-Proximal3.3902112.12193HepG2BCLAF1
chr161884958118849688-CDS,intron-Distal,intron-Proximal3.367244.02462K562TIA1
chr161882308118823128-CDS,intron-Distal,intron-Proximal4.9840221.78560HepG2BCLAF1
chr161885306118853114-CDS,intron-Distal3.3342418.51096HepG2BCLAF1
chr161884727618847328-CDS,intron-Distal3.945374.12025K562YBX3
chr161886128318861317-CDS,intron-Distal3.8598210.35753HepG2BCLAF1
chr161884940518849447-CDS,intron-Distal3.025756.31179HepG2BCLAF1
chr161884782018847856-CDS,intron-Distal,intron-Proximal4.2401617.19016HepG2BCLAF1
chr161883094518830973-CDS,intron-Distal3.464783.97300HepG2EIF3D
chr161889539118895393-CDS,intron-Distal,intron-Proximal3.8860622.57466HepG2BCLAF1
chr161888767918887713-CDS,intron-Distal,intron-Proximal4.7150710.47008HepG2BCLAF1
chr161885357318853703-CDS,intron-Distal3.921604.48916K562FXR1
chr161884782218847854-CDS,intron-Distal3.296175.24964HepG2FXR2
chr161884988118850014-CDS,intron-Distal,intron-Proximal3.281798.48432K562ZNF622
chr161886618918866277-CDS,intron-Distal,intron-Proximal3.1246010.56836K562SF3B4
chr161884864318848765-CDS,intron-Distal3.0232325.05207HepG2BCLAF1
chr161884857218848626-CDS,intron-Distal,intron-Proximal5.657808.13842HepG2ZNF800
chr161882342218823450-CDS,intron-Distal,intron-Proximal4.124263.32022K562UCHL5
chr161884565918845753-CDS,intron-Distal4.1586616.66502HepG2EIF3H
chr161885877418858830-CDS,intron-Distal,intron-Proximal4.280634.91329HepG2FASTKD2
chr161884725518847332-CDS,intron-Distal3.7478211.58254K562ZNF622
chr161884993218849976-CDS,intron-Distal3.822173.75945HepG2UCHL5
chr161885674818856810-CDS,intron-Distal,intron-Proximal3.382705.65591HepG2ZNF800
chr161886597518865997-CDS,intron-Distal,intron-Proximal3.866976.11943K562UCHL5
chr161884553818845658-CDS,intron-Distal3.105906.13910HepG2ZNF800
chr161886348218863540-CDS,intron-Distal,intron-Proximal4.104395.63851K562SF3B4
chr161884769518847772-CDS,intron-Distal4.127068.60107HepG2FXR2
chr161886338818863429-CDS,intron-Distal,intron-Proximal5.3689926.44985HepG2BCLAF1
chr161884782018847855-CDS,intron-Distal,intron-Proximal4.012275.20984HepG2EIF3H
chr161885359318853676-CDS,intron-Distal3.6013612.67896HepG2BCLAF1
chr161888757018887636-CDS,intron-Distal,intron-Proximal4.078764.55095K562YBX3
chr161886163818861732-CDS,intron-Distal,intron-Proximal3.477588.88489K562UCHL5
chr161890361518903676-CDS,intron-Distal3.3734417.37897HepG2PPIG
chr161885670718856822-CDS,intron-Distal,intron-Proximal4.114916.60968K562BUD13
chr161884061918840653-CDS,intron-Distal3.165283.40321HepG2GRWD1
chr161882677318826811-CDS,intron-Distal3.5027011.74374HepG2BCLAF1
chr161886133018861388-CDS,intron-Distal3.289764.00697HepG2ZNF800
chr161883082618830866-CDS,intron-Distal3.385485.58370HepG2PPIG
chr161885101918851114-CDS,intron-Distal,intron-Proximal3.597379.43837HepG2GRWD1
chr161884552518845584-CDS,intron-Distal,intron-Proximal3.065045.86900HepG2HLTF
chr161884101718841077-CDS,intron-Distal3.5660621.14289HepG2BCLAF1
chr161885673518856847-CDS,intron-Distal,intron-Proximal3.7678410.80378K562UCHL5
chr161886505318865115-CDS,intron-Distal3.539739.15184HepG2HLTF
chr161882653818826582-CDS,intron-Distal4.7054918.65654HepG2BCLAF1
chr161884949618849562-CDS,intron-Distal,intron-Proximal4.032893.48187K562RBM15
chr161884749418847519-CDS,intron-Distal5.4606418.37338HepG2BCLAF1
chr161884975118849786-CDS,intron-Distal,intron-Proximal3.3262612.29797HepG2BCLAF1
chr161888757818887650-CDS,intron-Distal,intron-Proximal3.005263.55339HepG2FASTKD2
chr161886493518864992-CDS,intron-Distal3.8053516.85915HepG2BCLAF1
chr161884424918844278-CDS,intron-Distal,intron-Proximal3.007526.49271HepG2GRWD1
chr161884571918845753-CDS,intron-Distal4.1687914.72633HepG2BCLAF1
chr161889363618893661-CDS,intron-Distal,intron-Proximal3.111605.82118HepG2HLTF
chr161884434118844383-CDS,intron-Distal4.1339413.38279HepG2BCLAF1
chr161886364918863700-CDS,intron-Distal3.9767429.31629HepG2BCLAF1
chr161883094618830970-CDS,intron-Distal4.2267311.95754HepG2BCLAF1
chr161886159418861653-CDS,intron-Distal4.224605.91377HepG2FXR2
chr161882875018828848-CDS,intron-Distal,intron-Proximal3.105019.69540HepG2U2AF2
chr161882652218826579-CDS,intron-Distal5.273804.98895HepG2FXR2
chr161884739418847504-CDS,intron-Distal3.442097.88589HepG2EIF3H
chr161886491118864960-CDS,intron-Distal3.573704.87412HepG2EIF3H
chr161885102818851110-CDS,intron-Distal3.149408.33723HepG2EIF3H
chr161885101918851124-CDS,intron-Distal,intron-Proximal4.409847.87612K562UCHL5
chr161884952418849547-CDS,intron-Distal3.580347.74581HepG2BCLAF1
chr161884561318845751-CDS,intron-Distal3.0945910.50326K562ZNF622
chr161886518318865189-CDS,intron-Distal5.9356227.21994HepG2BCLAF1
chr161884083718840885-CDS,intron-Distal4.380766.42098HepG2EIF3H
chr161884939618849474-CDS,intron-Distal4.296994.67299K562DDX24
chr161884060718840652-CDS,intron-Distal,intron-Proximal4.389725.95105HepG2EIF3H
chr161889539118895443-CDS,intron-Distal,intron-Proximal3.300094.27864K562DDX24
chr161886338618863430-CDS,intron-Distal,intron-Proximal3.231558.39949HepG2GRWD1
chr161886338718863433-CDS,intron-Distal,intron-Proximal3.785806.80284K562DDX24
chr161886156118861638-CDS,intron-Distal3.081815.71803K562UCHL5
chr161889539018895436-CDS,intron-Distal,intron-Proximal3.9280711.10209HepG2PPIG
chr161886132318861384-CDS,intron-Distal3.2199617.14748HepG2BCLAF1
chr161883942618839525-CDS,intron-Distal,intron-Proximal3.569126.12893K562BUD13
chr161884094618841017-CDS,intron-Distal3.6017522.81096HepG2BCLAF1
chr161885101918851111-CDS,intron-Distal,intron-Proximal3.317284.60832HepG2UCHL5
chr161885373618853772-CDS,intron-Distal3.260243.73778HepG2EIF3D
chr161884768118847730-CDS,intron-Distal,intron-Proximal4.2854127.08485HepG2BCLAF1
chr161885111518851199-CDS,intron-Distal3.1511821.81121HepG2BCLAF1
chr161885302318853096-CDS,intron-Distal3.101896.85631K562PUM2
chr161885104718851115-CDS,intron-Distal3.2266416.15534HepG2BCLAF1
chr161884564418845761-CDS,intron-Distal,intron-Proximal3.2733814.56366HepG2GRWD1
chr161884930318849357-CDS,intron-Distal,intron-Proximal3.136885.76569HepG2PRPF8
chr161885877518858885-CDS,intron-Distal3.118476.93682K562UCHL5
chr161884631218846360-CDS,intron-Distal4.4423514.68146HepG2BCLAF1
chr161884555018845620-CDS,intron-Distal3.547546.23402HepG2FXR2
chr161885914318859189-CDS,intron-Distal3.9684421.52247HepG2BCLAF1
chr161885675118856846-CDS,intron-Distal4.7883736.11809HepG2BCLAF1
chr161886138118861475-CDS,intron-Distal,intron-Proximal3.2214823.83150HepG2U2AF2
chr161886509318865141-CDS,intron-Distal3.725413.25631HepG2PRPF4
chr161884067618840824-CDS,intron-Distal3.5070325.68683HepG2BCLAF1
chr161882649618826522-CDS,intron-Distal,intron-Proximal4.068337.26028HepG2FXR2
chr161884575318845761-CDS,intron-Distal,intron-Proximal4.392587.23562HepG2BCLAF1
chr161888051218880556-CDS,intron-Distal3.620223.93645HepG2PPIG
chr161885294018852989-CDS,intron-Distal3.5966615.17842HepG2BCLAF1
chr161884857218848640-CDS,intron-Distal,intron-Proximal3.314509.54321HepG2BUD13
chr161882089318820940-CDS,intron-Distal3.5337810.21526HepG2BCLAF1
chr161884131518841357-CDS,intron-Distal3.411059.12012HepG2BCLAF1
chr161886166818861729-CDS,intron-Distal,intron-Proximal4.1768913.73242HepG2PPIG
chr161884096018841019-CDS,intron-Distal3.983078.00190HepG2GRWD1
chr161886503918865084-CDS,intron-Distal3.8048314.45566HepG2BCLAF1
chr161889686218896875-CDS,intron-Distal,intron-Proximal3.1028811.30774HepG2BCLAF1
chr161884054818840618-CDS,intron-Distal,intron-Proximal3.379583.94787K562AQR
chr161885289018852942-CDS,intron-Distal3.503837.09462HepG2EIF3D
chr161884773018847780-CDS,intron-Distal4.0096622.32166HepG2BCLAF1
chr161885296018853044-CDS,intron-Distal4.102053.83024HepG2IGF2BP1
chr161886599318866009-CDS,intron-Distal4.1301116.64241HepG2BCLAF1
chr161884126618841290-CDS,intron-Distal3.7559910.37681HepG2BCLAF1
chr161885288818853038-CDS,intron-Distal3.103193.28075K562GRWD1
chr161886363918863675-CDS,intron-Distal,intron-Proximal4.617444.53233HepG2ZNF800
chr161888051818880544-CDS,intron-Distal3.704309.43524HepG2BCLAF1
chr161886600018866058-CDS,intron-Distal3.023915.62120K562ZNF622
chr161883089918830945-CDS,intron-Distal3.489234.76457HepG2EIF3D
chr161886156518861640-CDS,intron-Distal4.082246.57534HepG2ZNF800
chr161884745918847494-CDS,intron-Distal4.5781911.11870HepG2BCLAF1
chr161885353018853569-CDS,intron-Distal3.5595413.36159HepG2BCLAF1
chr161886610718866156-CDS,intron-Distal3.264104.45064HepG2GRWD1
chr161886601518866051-CDS,intron-Distal3.514743.73778HepG2EIF3D
chr161885918918859225-CDS,intron-Distal3.1214010.78867HepG2BCLAF1
chr161884090018840989-CDS,intron-Distal6.0330112.23023HepG2EIF3H
chr161883935218839374-CDS,intron-Distal,intron-Proximal4.4953810.24470HepG2BCLAF1
chr161885915718859215-CDS,intron-Distal3.006633.26317HepG2FXR2
chr161886507418865151-CDS,intron-Distal3.172656.17838K562ZNF622
chr161884137318841425-CDS,intron-Distal4.2358114.24397HepG2BCLAF1
chr161886363718863781-CDS,intron-Distal,intron-Proximal3.1812312.63543K562ZNF622
chr161886338718863441-CDS,intron-Distal,intron-Proximal3.773557.20928HepG2ZNF800
chr161882302618823088-CDS,intron-Distal,intron-Proximal3.464894.88100K562AQR
chr161884987718849984-CDS,intron-Distal,intron-Proximal3.227813.69997K562GRWD1
chr161886058318860652-CDS,intron-Distal3.9454815.02956HepG2EIF3H
chr161888038718880445-CDS,intron-Distal,intron-Proximal6.1081810.77812HepG2PRPF8
chr161886338418863439-CDS,intron-Distal,intron-Proximal3.423587.16402HepG2FXR2
chr161883089918830941-CDS,intron-Distal3.506245.64032HepG2EIF3H
chr161886370318863746-CDS,intron-Distal4.819638.80607HepG2EIF3H
chr161885670718856753-CDS,intron-Distal,intron-Proximal3.929354.00320K562AQR
chr161885119918851249-CDS,intron-Distal4.1344319.00127HepG2BCLAF1
chr161889681518896876-CDS,intron-Distal,intron-Proximal3.8691510.90257HepG2PRPF8
chr161884553618845613-CDS,intron-Distal3.289117.36535K562ZNF622
chr161886138418861448-CDS,intron-Distal4.1066220.24575HepG2BCLAF1
chr161886164118861731-CDS,intron-Distal,intron-Proximal3.351977.45062HepG2HLTF
chr161886370018863760-CDS,intron-Distal4.1086329.62446HepG2BCLAF1
chr161887095618871021-CDS,intron-Distal4.189098.98329HepG2EIF3H
chr161885917818859223-CDS,intron-Distal4.033768.48059HepG2GRWD1
chr161883097018830976-CDS,intron-Distal4.427918.51432HepG2BCLAF1
chr161885913618859143-CDS,intron-Distal,intron-Proximal3.9628013.66456HepG2BCLAF1
chr161886054418860584-CDS,intron-Distal3.699684.39623HepG2PPIG
chr161884782518847855-CDS,intron-Distal,intron-Proximal3.197465.39278K562ZNF622
chr161884628218846384-CDS,intron-Distal3.701835.20121K562GRWD1
chr161886373918863786-CDS,intron-Distal,intron-Proximal4.301327.11196HepG2EIF3D
chr161884782718847855-CDS,intron-Distal,intron-Proximal3.050075.69477HepG2EIF3D
chr161884072618840772-CDS,intron-Distal3.962514.87412HepG2EIF3H
chr161882772518827844-CDS,intron-Distal3.7105232.29037HepG2BCLAF1
chr161884988318849957-CDS,intron-Distal,intron-Proximal5.324968.82609HepG2ZNF800
chr161885112418851195-CDS,intron-Distal3.039303.41227K562UCHL5
chr161886155518861633-CDS,intron-Distal,intron-Proximal4.2041326.65559HepG2BCLAF1
chr161884083918840879-CDS,intron-Distal4.2184012.50436HepG2BCLAF1
chr161884968418849706-CDS,intron-Distal,intron-Proximal3.994015.02066HepG2EIF3H
chr161884751918847537-CDS,intron-Distal,intron-Proximal3.6822711.73537HepG2BCLAF1
chr161884999018850050-CDS,intron-Distal,intron-Proximal4.559497.50107K562AQR
chr161882775018827807-CDS,intron-Distal3.449517.09352HepG2EIF3H
chr161884061218840654-CDS,intron-Distal3.692755.24452HepG2PPIG
chr161884621318846246-CDS,intron-Distal,intron-Proximal3.352476.18332HepG2GRWD1
chr161889364218893661-CDS,intron-Distal,intron-Proximal3.7223221.32435HepG2BCLAF1
chr161886600718866073-CDS,intron-Distal3.210316.64482HepG2FXR2
chr161886051618860562-CDS,intron-Distal,intron-Proximal5.359634.68690HepG2PRPF8
chr161887096518871006-CDS,intron-Distal4.4427820.29031HepG2BCLAF1
chr161884553018845647-CDS,intron-Distal3.2812910.03017HepG2EIF3H
chr161886597718865996-CDS,intron-Distal,intron-Proximal5.274056.73606HepG2EIF3H
chr161885101818851067-CDS,intron-Distal,intron-Proximal3.811965.05732HepG2ZNF800
chr161884422318844273-CDS,intron-Distal,intron-Proximal3.968785.56912HepG2AQR
chr161886517118865183-CDS,intron-Distal6.0586830.34265HepG2BCLAF1
chr161884769518847765-CDS,intron-Distal4.522936.11596HepG2PRPF4
chr161884987918849948-CDS,intron-Distal,intron-Proximal3.175489.73471HepG2GRWD1
chr161885370318853739-CDS,intron-Distal3.673813.61259K562ZNF622
chr161884057218840630-CDS,intron-Distal,intron-Proximal4.3467314.29800HepG2PRPF8
chr161886510418865185-CDS,intron-Distal3.771506.71725HepG2ZNF800
chr161886130218861392-CDS,intron-Distal3.442275.54843HepG2UCHL5
chr161886514918865171-CDS,intron-Distal5.5493631.51220HepG2BCLAF1
chr161885876318858834-CDS,intron-Distal,intron-Proximal3.5972410.27793HepG2GRWD1
chr161886365418863707-CDS,intron-Distal3.037875.56511HepG2GRWD1
chr161884987218849919-CDS,intron-Distal,intron-Proximal4.9524227.05814HepG2BCLAF1
chr161882340118823449-CDS,intron-Distal3.8406018.82192HepG2BCLAF1
chr161886065218860699-CDS,intron-Distal,intron-Proximal4.081026.66963HepG2EIF3H
chr161886615818866225-CDS,intron-Distal4.4860720.12151HepG2BCLAF1
chr161884991918850010-CDS,intron-Distal4.1571939.52786HepG2BCLAF1
chr161884962618849697-CDS,intron-Distal,intron-Proximal3.347574.83282K562EFTUD2
chr161882878818828847-CDS,intron-Distal,intron-Proximal4.549854.48002K562AQR
chr161886509318865197-CDS,intron-Distal,intron-Proximal4.292859.38306K562BUD13
chr161884625418846312-CDS,intron-Distal4.0268816.63901HepG2BCLAF1
chr161890358218903666-CDS,intron-Distal3.459367.66537HepG2GRWD1
chr161889364618893660-CDS,intron-Distal4.067477.69921HepG2PPIG
chr161884857318848651-CDS,intron-Distal,intron-Proximal3.5794810.40261HepG2GRWD1
chr161885925018859333-CDS,intron-Distal3.079805.60005HepG2PPIG
chr161887100618871025-CDS,intron-Distal4.0981514.52112HepG2BCLAF1
chr161886162818861737-CDS,intron-Distal,intron-Proximal3.318034.15299K562GRWD1
chr161886367518863749-CDS,intron-Distal3.447514.83522HepG2ZNF800
chr161886132718861415-CDS,intron-Distal3.7178212.02500HepG2GRWD1
chr161883094118830977-CDS,intron-Distal,intron-Proximal4.203585.76420HepG2EIF3H
chr161884738418847515-CDS,intron-Distal4.191835.29818K562FXR2
chr161884561918845711-CDS,intron-Distal3.037198.62157K562UCHL5
chr161884552418845619-CDS,intron-Distal,intron-Proximal4.147918.82687K562UCHL5
chr161886601018866061-CDS,intron-Distal4.1504823.14155HepG2BCLAF1
chr161884857118848657-CDS,intron-Distal,intron-Proximal3.117368.13521K562UCHL5
chr161886155918861622-CDS,intron-Distal3.268124.61844HepG2EIF3D
chr161884562718845718-CDS,intron-Distal3.649656.69098HepG2UCHL5
chr161886490618864935-CDS,intron-Distal3.5909910.50604HepG2BCLAF1
chr161885684618856918-CDS,intron-Distal5.2208925.84411HepG2BCLAF1
chr161884619918846290-CDS,intron-Distal,intron-Proximal3.436563.04831K562RBM15
chr161882327818823297-CDS,intron-Distal,intron-Proximal4.220398.51432HepG2BCLAF1
chr161886053818860583-CDS,intron-Distal,intron-Proximal3.912517.85063HepG2EIF3H
chr161886138218861447-CDS,intron-Distal3.103134.01178K562ZNF622
chr161884137018841420-CDS,intron-Distal4.196784.01763HepG2GRWD1
chr161884570818845769-CDS,intron-Distal,intron-Proximal3.681906.40700HepG2ZNF800
chr161885877118858846-CDS,intron-Distal,intron-Proximal3.135604.00925HepG2EIF3H
chr161886508418865149-CDS,intron-Distal5.5888936.79929HepG2BCLAF1
chr161886956418869611-CDS,intron-Distal4.5332321.08856HepG2BCLAF1
chr161883082818830870-CDS,intron-Distal3.8519111.53232HepG2BCLAF1
chr161890069318900712-CDS,intron-Distal,intron-Proximal6.1971516.01150HepG2BCLAF1
chr161886346218863528-CDS,intron-Distal,intron-Proximal3.406999.18467HepG2EIF3H
chr161886140018861446-CDS,intron-Distal3.652885.03335K562UCHL5
chr161884782418847859-CDS,intron-Distal,intron-Proximal5.014545.75200HepG2ZNF800
chr161884124718841278-CDS,intron-Distal,intron-Proximal3.558834.00333HepG2EIF3H
chr161886173318861790-CDS,intron-Distal,intron-Proximal4.1761810.14604HepG2FXR2
chr161884857418848643-CDS,intron-Distal,intron-Proximal4.3641830.52543HepG2BCLAF1
chr161886166218861736-CDS,intron-Distal,intron-Proximal4.072295.04760HepG2UCHL5
chr161886163318861733-CDS,intron-Distal,intron-Proximal4.2457140.80984HepG2BCLAF1
chr161882780718827851-CDS,intron-Distal3.582397.02198HepG2EIF3H
chr161885674918856837-CDS,intron-Distal,intron-Proximal3.7453811.53497HepG2BUD13
chr161884729418847334-CDS,intron-Distal3.4598811.20660HepG2BCLAF1
chr161886347518863527-CDS,intron-Distal4.1337621.22958HepG2BCLAF1
chr161884988518849956-CDS,intron-Distal,intron-Proximal4.436844.95909K562BUD13
chr161886127518861384-CDS,intron-Distal3.713888.86461HepG2EIF3H
chr161885913818859188-CDS,intron-Distal4.9915613.21799K562PUM2
chr161886057818860607-CDS,intron-Distal3.787299.73062HepG2GRWD1
chr161884725318847274-CDS,intron-Distal,intron-Proximal4.102518.16229HepG2GRWD1
chr161886343618863475-CDS,intron-Distal4.3952816.23926HepG2BCLAF1
chr161885102018851047-CDS,intron-Distal3.4773812.42637HepG2BCLAF1
chr161889679118896887-CDS,intron-Distal,intron-Proximal3.403717.75987K562PRPF8
chr161882870518828749-CDS,intron-Distal4.1773613.12590HepG2BCLAF1
chr161886363818863700-CDS,intron-Distal,intron-Proximal3.082177.64855HepG2PPIG
chr161885877218858839-CDS,intron-Distal,intron-Proximal3.050014.05119HepG2UCHL5
chr161887199018872017-CDS,intron-Distal4.0994111.91109HepG2BCLAF1
chr161882341018823449-CDS,intron-Distal3.827267.40684HepG2FXR2
chr161886955918869611-CDS,intron-Distal3.237835.59833HepG2GRWD1
chr161887096218871017-CDS,intron-Distal4.131104.68575HepG2FXR2
chr161882764818827697-CDS,intron-Distal4.680873.71264HepG2FXR2
chr161884427818844351-CDS,intron-Distal3.4492911.21317HepG2GRWD1
chr161884968818849745-CDS,intron-Distal,intron-Proximal3.0778313.76833HepG2BCLAF1
chr161886363918863649-CDS,intron-Distal,intron-Proximal5.1075521.42363HepG2BCLAF1
chr161884741518847525-CDS,intron-Distal3.683066.71725HepG2ZNF800
chr161886127518861327-CDS,intron-Distal3.8006010.37952HepG2GRWD1
chr161883088018830946-CDS,intron-Distal3.9315518.12565HepG2BCLAF1
chr161889348918893566-CDS,intron-Distal3.948789.85077HepG2PPIG
chr161886156718861644-CDS,intron-Distal4.576917.59222HepG2EIF3H
chr161886597718865993-CDS,intron-Distal,intron-Proximal5.5851530.79783HepG2BCLAF1
chr161884552518845602-CDS,intron-Distal,intron-Proximal3.144235.51671HepG2PPIG
chr161884088118840926-CDS,intron-Distal4.273804.68575HepG2FXR2
chr161884725518847280-CDS,intron-Distal3.392588.50351HepG2BCLAF1
chr161886168418861752-CDS,intron-Distal,intron-Proximal3.933067.17463HepG2EIF3H
chr161882649518826538-CDS,intron-Distal,intron-Proximal3.9474023.20686HepG2BCLAF1
chr161886168318861733-CDS,intron-Distal,intron-Proximal3.704525.65606HepG2FXR2
chr161890359018903664-CDS,intron-Distal4.0103227.71363HepG2BCLAF1
chr161886168718861790-CDS,intron-Distal,intron-Proximal3.5632912.48866K562DDX24
chr161885674918856831-CDS,intron-Distal,intron-Proximal3.357685.89279HepG2FXR2
chr161882312818823188-CDS,intron-Distal,intron-Proximal3.5478016.49991HepG2BCLAF1
chr161884089818840946-CDS,intron-Distal3.851919.83905HepG2BCLAF1
chr161882766118827708-CDS,intron-Distal4.5803413.76815HepG2BCLAF1
chr161884608618846233-CDS,intron-Distal,intron-Proximal4.751586.21813K562TIA1
chr161886601018866055-CDS,intron-Distal3.241994.78418HepG2EIF3H
chr161884562518845719-CDS,intron-Distal4.0331231.24544HepG2BCLAF1
chr161886370718863780-CDS,intron-Distal3.107735.33841K562DDX24
chr161885929318859352-CDS,intron-Distal4.0498227.98645HepG2BCLAF1
chr161883089518830924-CDS,intron-Distal3.343573.34034HepG2HLTF
chr161885373518853789-CDS,intron-Distal,intron-Proximal4.407394.76200K562BUD13
chr161884857318848642-CDS,intron-Distal,intron-Proximal5.0538010.39724HepG2EIF3H
chr161886510018865152-CDS,intron-Distal3.654284.14015K562DDX24
chr161884997218850012-CDS,intron-Distal,intron-Proximal3.450976.58818HepG2PPIG
chr161884725218847343-CDS,intron-Distal,intron-Proximal4.6004016.64710K562UCHL5
chr161885924018859293-CDS,intron-Distal4.1829029.66793HepG2BCLAF1
chr161884857218848663-CDS,intron-Distal,intron-Proximal3.827267.40511HepG2FXR2
chr161885368818853725-CDS,intron-Distal5.3100512.89578HepG2BCLAF1
chr161886053718860582-CDS,intron-Distal,intron-Proximal3.5990419.23758HepG2BCLAF1
chr161886334318863423-CDS,intron-Distal,intron-Proximal3.0360211.49171HepG2PRPF8
chr161888757118887633-CDS,intron-Distal,intron-Proximal3.9076620.68405HepG2BCLAF1
chr161886345618863518-CDS,intron-Distal4.095906.45305HepG2FXR2
chr161887201718872079-CDS,intron-Distal5.2519622.33420HepG2BCLAF1
chr161885675018856846-CDS,intron-Distal,intron-Proximal3.8390112.74130HepG2GRWD1
chr161886173318861775-CDS,intron-Distal,intron-Proximal4.5280424.33549HepG2BCLAF1
chr161884730318847338-CDS,intron-Distal3.590473.04890HepG2UCHL5
chr161890218618902225-CDS,intron-Distal,intron-Proximal3.540627.74581HepG2BCLAF1
chr161889539318895456-CDS,intron-Distal,intron-Proximal4.2233740.19767HepG2BCLAF1
chr161884768018847785-CDS,intron-Distal,intron-Proximal3.506356.94506K562DDX24
chr161885113718851193-CDS,intron-Distal3.975277.12716HepG2EIF3H
chr161886364918863703-CDS,intron-Distal4.0249212.15414HepG2EIF3H
chr161884962318849697-CDS,intron-Distal,intron-Proximal4.238118.11292HepG2EFTUD2
chr161886610618866179-CDS,intron-Distal5.9752711.22370HepG2EIF3H
chr161885884618858930-CDS,intron-Distal,intron-Proximal4.0292512.63049HepG2EIF3H
chr161882310218823190-CDS,intron-Distal,intron-Proximal4.356119.31350HepG2FXR2
chr161886374318863805-CDS,intron-Distal,intron-Proximal4.6925517.18244K562AQR
chr161886365718863788-CDS,intron-Distal,intron-Proximal3.140574.63930HepG2PABPN1
chr161888748218887504-CDS,intron-Distal4.503088.85766HepG2BCLAF1
chr161884638818846479-CDS,intron-Distal3.9165211.24043K562ZNF622
chr161884995718850009-CDS,intron-Distal3.390585.50142HepG2ZNF800
chr161887096618871004-CDS,intron-Distal3.387073.31745K562ZNF622
chr161884767918847776-CDS,intron-Distal,intron-Proximal3.371415.16640HepG2UCHL5
chr161884619918846245-CDS,intron-Distal,intron-Proximal3.410254.25142K562BUD13
chr161889356618893646-CDS,intron-Distal3.338757.16988HepG2PPIG
chr161884866318848765-CDS,intron-Distal3.765838.55801HepG2FXR2
chr161884572618845755-CDS,intron-Distal3.352103.69481K562UCHL5
chr161885359918853654-CDS,intron-Distal3.854414.65332HepG2ZNF800
chr161886049918860570-CDS,intron-Distal,intron-Proximal4.573683.02181K562PRPF8
chr161889691618896988-CDS,intron-Distal4.0378927.87795HepG2BCLAF1
chr161886490318864930-CDS,intron-Distal,intron-Proximal3.301323.00074HepG2EIF3D
chr161884741218847482-CDS,intron-Distal3.831207.55042HepG2PPIG
chr161886172618861792-CDS,intron-Distal,intron-Proximal3.7475410.14758K562ZNF622
chr161884961818849708-CDS,intron-Distal,intron-Proximal4.054088.19954HepG2CDC40
chr161886511618865190-CDS,intron-Distal,intron-Proximal3.381557.50303K562UCHL5
chr161884571818845760-CDS,intron-Distal3.846443.37921HepG2UCHL5
chr161882308618823161-CDS,intron-Distal3.219794.40180HepG2EIF3H
chr161883091718831005-CDS,intron-Distal,intron-Proximal3.2959510.01357K562AQR
chr161889348718893547-CDS,intron-Distal4.0417517.28671HepG2BCLAF1
chr161886053818860637-CDS,intron-Distal,intron-Proximal3.3981210.05284K562ZNF622
chr161884095018841014-CDS,intron-Distal3.818868.10734HepG2EIF3D
chr161884727418847342-CDS,intron-Distal3.2203711.08975HepG2GRWD1
chr161889647018896484-CDS,intron-Distal3.136849.80919HepG2BCLAF1
chr161885888118858926-CDS,intron-Distal3.1909214.17045HepG2BCLAF1
chr161886166118861734-CDS,intron-Distal,intron-Proximal3.207473.27746HepG2LIN28B
chr161882870618828784-CDS,intron-Distal3.074934.91034K562YBX3
chr161885288718852940-CDS,intron-Distal4.3759017.78023HepG2BCLAF1
chr161884857418848692-CDS,intron-Distal,intron-Proximal4.0438112.73791K562DDX24
chr161884866118848767-CDS,intron-Distal,intron-Proximal3.233239.80632K562UCHL5
chr161884562018845699-CDS,intron-Distal3.121486.29653HepG2HLTF
chr161886164018861729-CDS,intron-Distal,intron-Proximal3.427837.34688HepG2ZNF800
chr161886489418864938-CDS,intron-Distal,intron-Proximal5.183714.35676HepG2PRPF8
chr161883088618830949-CDS,intron-Distal3.161455.73981HepG2GRWD1
chr161889538918895449-CDS,intron-Distal,intron-Proximal3.988446.48632HepG2PRPF4
chr161883937418839407-CDS,intron-Distal3.404304.65365HepG2GRWD1
chr161887534018875378-CDS,intron-Distal3.082723.63043HepG2GRWD1
chr161885112318851251-CDS,intron-Distal4.089564.53033K562FXR1
chr161882693718826972-CDS,intron-Distal3.068686.70604HepG2BCLAF1
chr161886177518861790-CDS,intron-Distal,intron-Proximal4.6355320.44120HepG2BCLAF1
chr161884553518845604-CDS,intron-Distal3.5328219.23758HepG2BCLAF1
chr161885299218853038-CDS,intron-Distal4.088275.31703HepG2EIF3H
chr161886058218860681-CDS,intron-Distal3.3016724.44222HepG2BCLAF1
chr161888757518887628-CDS,intron-Distal,intron-Proximal5.226527.59997HepG2EIF3H
chr161886338718863432-CDS,intron-Distal,intron-Proximal4.018179.36792K562ZNF622
chr161885101818851052-CDS,intron-Distal,intron-Proximal3.438946.13978HepG2PPIG
chr161883930818839369-CDS,intron-Distal,intron-Proximal4.356936.65114HepG2PRPF8
chr161883091718831049-CDS,intron-Distal,intron-Proximal3.633227.68851HepG2AQR
chr161884857418848668-CDS,intron-Distal,intron-Proximal4.2510314.92651K562ZNF622
chr161888212218882134-CDS,intron-Distal,intron-Proximal3.559106.74947HepG2BCLAF1
chr161889643118896470-CDS,intron-Distal3.4654511.17783HepG2BCLAF1
chr161886617218866225-CDS,intron-Distal3.255065.46673HepG2FXR2
chr161884768318847766-CDS,intron-Distal3.296128.11148HepG2GRWD1
chr161885373618853775-CDS,intron-Distal4.2090313.42460HepG2BCLAF1
chr161886053818860570-CDS,intron-Distal,intron-Proximal3.471834.22563K562UCHL5
chr161885288718852937-CDS,intron-Distal4.415958.05048HepG2EIF3H
chr161885872618858784-CDS,intron-Distal,intron-Proximal3.544944.50321HepG2PRPF8
chr161885288518852924-CDS,intron-Distal,intron-Proximal4.739865.50697K562UCHL5
chr161885922318859325-CDS,intron-Distal3.367059.56665HepG2GRWD1
chr161885288918852941-CDS,intron-Distal3.099843.26317HepG2FXR2
chr161886166618861741-CDS,intron-Distal,intron-Proximal3.511335.35667HepG2EIF3D
chr161888200018882023-CDS,intron-Distal4.292203.49332HepG2PPIG
chr161889349918893576-CDS,intron-Distal3.487827.17615HepG2EIF3H
chr161886369118863743-CDS,intron-Distal3.042034.16429HepG2FASTKD2
chr161884157818841647-CDS,intron-Distal5.033669.07433K562YBX3
chr161885361318853669-CDS,intron-Distal3.643796.07514HepG2EIF3H
chr161884620918846235-CDS,intron-Distal,intron-Proximal4.9641215.10546HepG2BCLAF1
chr161886376018863784-CDS,intron-Distal3.8974712.01397HepG2BCLAF1
chr161885877418858881-CDS,intron-Distal,intron-Proximal3.4563731.12597HepG2BCLAF1
chr161885675118856817-CDS,intron-Distal3.546898.51932K562ZNF622
chr161885691818856963-CDS,intron-Distal4.5234018.21191HepG2BCLAF1
chr161884563918845718-CDS,intron-Distal4.357687.66722HepG2FXR2
chr161886174818861790-CDS,intron-Distal,intron-Proximal3.817287.20928HepG2ZNF800
chr161884640118846486-CDS,intron-Distal3.8262413.85216HepG2GRWD1
chr161884949818849549-CDS,intron-Distal3.792203.93645HepG2PPIG
chr161884552618845580-CDS,intron-Distal3.494499.89684HepG2GRWD1
chr161884987818850002-CDS,intron-Distal,intron-Proximal3.699858.33275HepG2FXR2
chr161882326918823299-CDS,intron-Distal,intron-Proximal3.049354.34339HepG2FXR2
chr161886493318865010-CDS,intron-Distal4.169436.11124HepG2FASTKD2
chr161885298918853061-CDS,intron-Distal3.2715721.33794HepG2BCLAF1
chr161886508918865188-CDS,intron-Distal5.7619321.15855HepG2EIF3H
chr161884768718847771-CDS,intron-Distal4.0864710.59462HepG2EIF3H
chr161884621118846237-CDS,intron-Distal,intron-Proximal3.853123.70701HepG2PRPF4
chr161885930118859356-CDS,intron-Distal,intron-Proximal5.636248.72026HepG2EIF3H
chr161886141518861448-CDS,intron-Distal3.022994.29277HepG2GRWD1
chr161886057018860693-CDS,intron-Distal,intron-Proximal4.6336411.48279K562UCHL5
chr161886177318861793-CDS,intron-Distal,intron-Proximal3.316684.56061K562BUD13
chr161884164718841671-CDS,intron-Distal3.759566.80293K562YBX3
chr161886500518865082-CDS,intron-Distal5.033017.84586HepG2EIF3H
chr161882645518826518-CDS,intron-Distal,intron-Proximal3.355889.01982HepG2PRPF8
chr161888277118882798-CDS,intron-Distal3.208518.43208HepG2BCLAF1
chr161886157618861656-CDS,intron-Distal3.147033.79703K562DDX24
chr161884857318848639-CDS,intron-Distal,intron-Proximal3.188048.30979HepG2EIF3D
chr161884626118846310-CDS,intron-Distal3.381554.86973K562UCHL5
chr161886610518866158-CDS,intron-Distal4.1495615.85384HepG2BCLAF1
chr161886371118863801-CDS,intron-Distal,intron-Proximal3.314016.15340HepG2AQR
chr161885684618856929-CDS,intron-Distal3.473619.53024HepG2GRWD1
chr161886363818863649-CDS,intron-Distal,intron-Proximal3.408284.83845HepG2EIF3H
chr161884900718849080-intron-Distal4.498714.80438HepG2KHSRP
chr161884959918849675-intron-Distal,intron-Proximal3.294743.06355HepG2KHSRP
chr161888826718888408-intron-Distal,intron-Proximal4.2978310.04635K562KHSRP
chr161885900518859091-intron-Distal,intron-Proximal4.113478.11138K562KHSRP
chr161884959318849668-intron-Distal,intron-Proximal3.169785.26410HepG2TIAL1
chr161885903118859090-intron-Distal,intron-Proximal3.539024.54121HepG2KHSRP
chr161883929518839344-intron-Distal,intron-Proximal5.8957910.48996K562AQR
chr161884399018844046-intron-Distal4.012643.27618K562RBFOX2
chr161888035318880425-intron-Distal,intron-Proximal4.667364.13847K562AQR
chr161888786518887954-intron-Distal3.739365.78005K562KHSRP
chr161885699518857106-intron-Distal,intron-Proximal4.3222310.34114K562KHSRP
chr161885333618853429-intron-Distal4.495624.58968K562PRPF8
chr161885347818853530-intron-Distal,intron-Proximal4.842335.26064K562AQR
chr161889549118895545-intron-Distal,intron-Proximal4.910865.81672HepG2U2AF2
chr161885055818850669-intron-Distal4.177684.51080HepG2HNRNPL
chr161884381718843925-intron-Distal3.606095.14628K562TARDBP
chr161884247318842532-intron-Distal4.389614.62276K562TARDBP
chr161890317118903292-intron-Distal5.3290510.69076HepG2DKC1
chr161883213118832247-intron-Distal4.530805.68841K562KHSRP
chr161885704318857109-intron-Distal,intron-Proximal4.519724.26925HepG2KHSRP
chr161882345418823492-intron-Distal,intron-Proximal4.213195.47493HepG2BUD13
chr161882727118827338-intron-Distal4.7158811.18830HepG2U2AF2
chr161893691318936979-intron-Distal3.945019.86887HepG2NKRF
chr161884959218849649-intron-Distal,intron-Proximal3.627143.88924K562PRPF8
chr161884425718844262-intron-Distal,intron-Proximal3.688275.28960K562AQR
chr161887833118878392-intron-Distal4.846095.95026HepG2U2AF2
chr161883217218832302-intron-Distal3.745984.28919HepG2KHSRP
chr161886384618863928-intron-Distal,intron-Proximal3.487974.82741HepG2KHSRP
chr161889332818893437-intron-Distal,intron-Proximal4.562174.26925HepG2KHSRP
chr161882109618821169-intron-Distal3.450794.56724K562KHSRP
chr161886359818863638-intron-Distal,intron-Proximal4.580483.70131HepG2PRPF8
chr161884415918844204-intron-Distal,intron-Proximal3.189033.44979HepG2PRPF8
chr161884421918844257-intron-Distal,intron-Proximal4.831156.99120K562AQR
chr161884602618846156-intron-Distal,intron-Proximal4.9124116.81404HepG2U2AF2
chr161885343518853519-intron-Distal,intron-Proximal4.204433.49003K562PRPF8
chr161885586018855926-intron-Distal4.313614.38266K562TARDBP
chr161883950918839635-intron-Distal,intron-Proximal3.3805011.25803HepG2U2AF2
chr161883934418839353-intron-Distal,intron-Proximal4.019636.80869K562AQR
chr161885089918851020-intron-Distal,intron-Proximal3.775635.70278K562AQR
chr161883922218839272-intron-Distal,intron-Proximal4.008395.64238K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SMG1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SMG1 is not available on ENCORE database.

  • 101 RBPs can affect the levels of SMG1.  








The Knockdown/knockout RNA-Seq assay for SMG1 is not available on ENCORE database.





101 RBPs can affect the gene expression of SMG1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SMG1ENSG00000157106.1210565.396208847.299100.255905.553004.75130HepG2ACO1
SMG1ENSG00000157106.123766.049706798.81950-0.852207.587605.99650HepG2BCCIP
SMG1ENSG00000157106.127136.981608846.17600-0.309706.987606.01790HepG2CKAP4
SMG1ENSG00000157106.126635.947309337.18660-0.492702.966302.17170HepG2CNOT7
SMG1ENSG00000157106.126598.016308654.67210-0.3914013.8344012.39090HepG2DAZAP1
SMG1ENSG00000157106.127086.465308182.85180-0.207503.757802.80430HepG2DDX19B
SMG1ENSG00000157106.125628.656006511.47060-0.210202.478601.38700HepG2DDX1
SMG1ENSG00000157106.127425.110006364.449000.222302.182001.38170HepG2DDX24
SMG1ENSG00000157106.127169.632708464.67460-0.239604.113403.32000HepG2DKC1
SMG1ENSG00000157106.124748.206306384.91130-0.427308.978707.76450HepG2DNAJC21
SMG1ENSG00000157106.124421.516906328.32390-0.5173020.9885019.34720HepG2DNAJC2
SMG1ENSG00000157106.127659.062605444.443200.492305.307604.50330HepG2EIF2S1
SMG1ENSG00000157106.126550.817104847.362800.434404.596403.45270HepG2EIF3D
SMG1ENSG00000157106.127778.114306016.710000.370302.847902.20010HepG2EIF4A3
SMG1ENSG00000157106.1211214.282405858.187400.936708.850707.65680HepG2EIF4B
SMG1ENSG00000157106.129979.278808538.114700.224903.544502.61570HepG2EIF4G1
SMG1ENSG00000157106.1215285.5575012593.347900.279404.735103.98750HepG2ETF1
SMG1ENSG00000157106.126503.620703357.950800.9536025.2562023.00260HepG2FUBP3
SMG1ENSG00000157106.127232.265205631.427500.360802.873502.19570HepG2G3BP1
SMG1ENSG00000157106.128565.800205978.564800.518706.284604.93260HepG2G3BP2
SMG1ENSG00000157106.127342.761008447.12300-0.202102.471301.54180HepG2HDGF
SMG1ENSG00000157106.125199.620606446.07810-0.310003.419302.71020HepG2HNRNPA1
SMG1ENSG00000157106.124654.635007170.00160-0.6233011.094309.78410HepG2HNRNPC
SMG1ENSG00000157106.129030.033405702.478200.6630011.245409.92280HepG2HNRNPK
SMG1ENSG00000157106.126585.264907883.83220-0.259706.864905.84730HepG2HNRNPL
SMG1ENSG00000157106.126160.188407343.09430-0.253401.883401.35490HepG2HNRNPLL
SMG1ENSG00000157106.125360.931207122.60300-0.4099010.915809.77830HepG2HNRNPU
SMG1ENSG00000157106.127882.687505724.200500.461504.780703.91500HepG2IGF2BP2
SMG1ENSG00000157106.126314.704107275.51490-0.204304.404103.49860HepG2ILF2
SMG1ENSG00000157106.129199.663805757.609600.676006.900505.23760HepG2KHSRP
SMG1ENSG00000157106.126774.338808088.03810-0.255705.330103.92700HepG2KIF1C
SMG1ENSG00000157106.127477.695706072.848300.300102.238701.64670HepG2MAGOH
SMG1ENSG00000157106.127617.414306106.817800.318802.247801.67550HepG2MATR3
SMG1ENSG00000157106.1210215.432506250.651700.708609.830008.67870HepG2NCBP2
SMG1ENSG00000157106.127549.360305566.539900.439504.223503.34290HepG2PABPC4
SMG1ENSG00000157106.125790.990107050.24320-0.283905.211604.09680HepG2PARN
SMG1ENSG00000157106.127666.584705408.416600.5033015.8004014.54280HepG2PCBP1
SMG1ENSG00000157106.123261.081404008.61480-0.297803.473002.09430HepG2PKM
SMG1ENSG00000157106.125065.537906352.80470-0.326705.313304.32120HepG2PPIL4
SMG1ENSG00000157106.127398.223506238.078200.246003.934303.02660HepG2PRPF4
SMG1ENSG00000157106.126295.036805503.473700.193802.821202.26900HepG2PTBP1
SMG1ENSG00000157106.1210030.041408696.214200.205804.702803.97220HepG2PUM1
SMG1ENSG00000157106.1211767.444108689.921100.437307.927106.81830HepG2PUM2
SMG1ENSG00000157106.126116.434309011.66510-0.5591020.9018019.49440HepG2PUS1
SMG1ENSG00000157106.128163.249705959.955400.453709.347308.29730HepG2QKI
SMG1ENSG00000157106.129972.847505409.209800.8825017.7645016.15310HepG2RBM25
SMG1ENSG00000157106.128718.402606124.665300.5093016.4252015.31860HepG2NELFE
SMG1ENSG00000157106.128528.802305704.606300.5801021.6267020.18320HepG2RECQL
SMG1ENSG00000157106.127179.369909373.01510-0.384702.462301.70640HepG2RPS3A
SMG1ENSG00000157106.124441.490306343.03330-0.5141018.9645017.49820HepG2SAFB2
SMG1ENSG00000157106.128645.836707268.292800.250302.157101.52910HepG2SF3B1
SMG1ENSG00000157106.1210340.014105729.454200.8517045.4740043.64110HepG2SF3B4
SMG1ENSG00000157106.1210002.816707854.781900.3487011.2814010.02280HepG2SLBP
SMG1ENSG00000157106.125816.379707397.11680-0.3468011.8225010.63640HepG2SMN1
SMG1ENSG00000157106.1215627.9842011888.405100.3945013.5018012.61740HepG2SRFBP1
SMG1ENSG00000157106.128479.352105980.461700.5036018.3984017.40450HepG2SRSF1
SMG1ENSG00000157106.129983.966108088.422600.303706.277405.38830HepG2SRSF5
SMG1ENSG00000157106.1210624.118504865.555001.1266083.8564081.70410HepG2SRSF9
SMG1ENSG00000157106.1210568.430309198.862300.200103.910503.19380HepG2SUCLG1
SMG1ENSG00000157106.128994.706305375.893900.7425025.7441024.26530HepG2TAF15
SMG1ENSG00000157106.126598.964304939.266600.417806.348105.08690HepG2TIA1
SMG1ENSG00000157106.124411.326806921.19660-0.6498015.7787014.76210HepG2TIAL1
SMG1ENSG00000157106.124653.644706982.79120-0.5854020.4585019.10470HepG2TRIM56
SMG1ENSG00000157106.1210159.592907228.801200.490906.758005.78800HepG2U2AF1
SMG1ENSG00000157106.1211379.908708471.170100.425803.980502.96600HepG2UBE2L3
SMG1ENSG00000157106.128169.628809293.67900-0.186003.030502.30670HepG2UPF1
SMG1ENSG00000157106.123732.955006095.06000-0.707303.234202.14550HepG2UPF2
SMG1ENSG00000157106.125774.814408395.26940-0.539804.190602.83660HepG2XPO5
SMG1ENSG00000157106.123251.693906550.77290-1.0105010.804709.38640HepG2XRN2
SMG1ENSG00000157106.126827.147006156.201100.149102.294301.67570HepG2ZC3H8
SMG1ENSG00000157106.124958.190606444.15200-0.378202.837001.83930K562AKAP8
SMG1ENSG00000157106.1210386.071807585.383100.453305.720004.92950K562AQR
SMG1ENSG00000157106.125139.117206402.75950-0.317204.902203.64860K562ATP5C1
SMG1ENSG00000157106.124420.573205057.90790-0.194302.847701.87410K562BCLAF1
SMG1ENSG00000157106.125623.215307008.67940-0.317704.182002.69600K562CCDC124
SMG1ENSG00000157106.123314.006303837.17710-0.211502.343301.38540K562CSTF2
SMG1ENSG00000157106.129331.372307890.300100.241903.906403.15110K562DDX47
SMG1ENSG00000157106.125215.356006566.84370-0.332405.680904.37110K562DKC1
SMG1ENSG00000157106.125582.897106588.87950-0.239003.199402.43480K562EIF2S2
SMG1ENSG00000157106.126845.039504916.368900.477404.516703.15620K562EIF3D
SMG1ENSG00000157106.1212057.0063010672.555700.175902.683701.75750K562EIF4G2
SMG1ENSG00000157106.123617.697606347.48890-0.8111016.4568014.19740K562FIP1L1
SMG1ENSG00000157106.125462.355704314.180400.340306.065405.22120K562FXR1
SMG1ENSG00000157106.125768.249604318.041100.417702.890602.16540K562G3BP2
SMG1ENSG00000157106.123241.041104602.71150-0.506004.555402.69560K562GEMIN5
SMG1ENSG00000157106.125312.154508780.85270-0.7251015.9575014.10040K562GRSF1
SMG1ENSG00000157106.123037.277905220.90690-0.7815011.209109.01720K562HNRNPM
SMG1ENSG00000157106.124453.878408605.83800-0.9503021.8744019.82080K562HSPD1
SMG1ENSG00000157106.124901.895906199.26790-0.338804.168402.76680K562MAK16
SMG1ENSG00000157106.123305.164904521.70580-0.452103.773602.21150K562NONO
SMG1ENSG00000157106.122815.540303705.04570-0.396103.454701.79670K562NUSAP1
SMG1ENSG00000157106.126287.510004602.566100.450006.085004.61780K562PCBP2
SMG1ENSG00000157106.122934.924704349.41800-0.567505.963203.24060K562PES1
SMG1ENSG00000157106.122848.395903673.90610-0.367203.834602.11300K562PHF6
SMG1ENSG00000157106.124374.086905593.89830-0.354902.925001.32510K562PKM
SMG1ENSG00000157106.123760.870707205.66500-0.9381020.2963017.25170K562PPIG
SMG1ENSG00000157106.123429.152004467.55940-0.381602.403101.70220K562PRPF8
SMG1ENSG00000157106.122301.170803373.99060-0.552107.865806.18650K562PSIP1
SMG1ENSG00000157106.123091.718604568.51680-0.563303.797402.22080K562RRP9
SMG1ENSG00000157106.127418.826205976.290200.311805.389304.27990K562SF3A3
SMG1ENSG00000157106.125537.637804490.943400.302203.779502.77470K562SF3B4
SMG1ENSG00000157106.126690.055504291.642400.640402.726101.50860K562SNRNP200
SMG1ENSG00000157106.122362.059002918.11780-0.305002.715401.70400K562SRFBP1
SMG1ENSG00000157106.123276.304303991.19990-0.284802.860801.78530K562SRSF4
SMG1ENSG00000157106.123967.542404809.62670-0.277702.924202.08050K562TIA1
SMG1ENSG00000157106.122554.437403245.22270-0.345302.672801.75490K562TIAL1
SMG1ENSG00000157106.125304.710906762.83880-0.350407.610505.45510K562TROVE2
SMG1ENSG00000157106.125716.640704323.544400.402906.224505.02820K562U2AF2
SMG1ENSG00000157106.125697.502906421.76980-0.172602.387601.71750K562UPF1
SMG1ENSG00000157106.127251.378605714.134300.343609.167707.72270K562WDR43
SMG1ENSG00000157106.123491.344304661.53450-0.417003.600602.15570K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SMG1 is not available on ENCORE database.





10 RBPs can affect the splicing of SMG1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESMG1ENSG00000157106.12chr16-188884521888855418887445188877151889081618891041-0.295000.001330.02648excludedK562SF3B4
SESMG1ENSG00000157106.12chr16-188415401884169118841247188414371884426118844488-0.327000.000000.00000excludedHepG2U2AF1
SESMG1ENSG00000157106.12chr16-188415401884169118841247188414371884426118844488-0.254000.000000.00000excludedHepG2U2AF2
SESMG1ENSG00000157106.12chr16-188415401884169118841247188414371884426118844488-0.063000.003130.03169excludedK562AQR
SESMG1ENSG00000157106.12chr16-188811751888131618880425188806251888193118882033-0.110000.005200.06413excludedK562PUS1
SESMG1ENSG00000157106.12chr16-188415401884169118841247188414371884426118844488-0.130000.000010.00060excludedHepG2SF3A3
SESMG1ENSG00000157106.12chr16-188811751888131618880425188806251888193118882033-0.136000.001520.08661excludedK562HNRNPUL1
SESMG1ENSG00000157106.12chr16-188811751888131618880425188806251888193118882033-0.189000.000800.02302excludedK562RBM15
SESMG1ENSG00000157106.12chr16-188811751888131618880425188806251888193118882033-0.192000.000370.01252excludedK562AGGF1
SESMG1ENSG00000157106.12chr16-188415401884169118841247188414371884426118844488-0.119000.002080.07460excludedHepG2HNRNPU
A3SSSMG1ENSG00000157106.12chr16-1884154018841737188415401884169118844261188444880.090000.000050.00042longerK562AQR
A3SSSMG1ENSG00000157106.12chr16-1882649618826624188264961882660318826761188269730.053000.004410.02588longerK562AQR
A3SSSMG1ENSG00000157106.12chr16-1887995418880061188799541888004118880425188806250.140000.014470.07252longerK562AQR
A3SSSMG1ENSG00000157106.12chr16-1888350518883698188835051888366718883815188838720.241000.004210.02485longerK562AQR
A3SSSMG1ENSG00000157106.12chr16-1884426118844510188442611884448818845525188457600.117000.000000.00002longerK562AQR
A3SSSMG1ENSG00000157106.12chr16-1883082318831026188308231883097618839352188394930.205000.000000.00005longerK562AQR
A3SSSMG1ENSG00000157106.12chr16-1885877418858967188587741885892918859137188593550.129000.000220.00177longerK562AQR
MXESMG1ENSG00000157106.12chr16-18879844188799191887995418880061188795111887967618880425188806250.240000.002070.017111includedK562AQR
MXESMG1ENSG00000157106.12chr16-18856750188569731885877418858967188535291885377618859137188593550.095000.001020.009271includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SMG1 is not avaliable on ENCORE database.