TMEM126A

General Information

Gene Name       : TMEM126A
Gene ID             : ENSG00000171202.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMEM126A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMEM126AENSG00000171202.637.7439.7238.73ENCSR000AEF
HepG2TMEM126AENSG00000171202.618.5831.7025.14ENCSR985KAT
K562TMEM126AENSG00000171202.634.7530.3432.55ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMEM126A is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMEM126A RNA is bound by 1 proteins.  







eCLIP assay for TMEM126A is not avaliable on ENCORE database.





1 proteins are bound to TMEM126A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr118535905385359111+5'-UTR3.406277.50590K562DDX3X
chr118535911185359133+5'-UTR5.118927.12859K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMEM126A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMEM126A is not available on ENCORE database.

  • 48 RBPs can affect the levels of TMEM126A.  








The Knockdown/knockout RNA-Seq assay for TMEM126A is not available on ENCORE database.





48 RBPs can affect the gene expression of TMEM126A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMEM126AENSG00000171202.2179.74640255.55280-0.507701.884701.36520HepG2DDX6
TMEM126AENSG00000171202.2210.95820130.725900.690303.544802.79370HepG2DKC1
TMEM126AENSG00000171202.2226.15080366.58910-0.696903.345402.69370HepG2ETF1
TMEM126AENSG00000171202.241.4861081.69640-0.977602.355501.76120HepG2GPKOW
TMEM126AENSG00000171202.288.83020132.60460-0.578002.003101.47720HepG2HNRNPU
TMEM126AENSG00000171202.2171.15860259.77070-0.601902.398301.47530HepG2KHSRP
TMEM126AENSG00000171202.286.01130167.59660-0.962403.008101.86480HepG2NONO
TMEM126AENSG00000171202.2170.33560251.12230-0.560002.427401.74720HepG2PABPC4
TMEM126AENSG00000171202.2267.18430154.848300.786903.552702.18320HepG2PRPF6
TMEM126AENSG00000171202.2215.58260140.676200.615802.092901.38610HepG2PRPF8
TMEM126AENSG00000171202.2176.79470280.90740-0.668004.108203.47120HepG2PTBP1
TMEM126AENSG00000171202.2183.96810274.71340-0.578502.917502.22910HepG2PUM2
TMEM126AENSG00000171202.2193.20870139.175900.473202.063801.51330HepG2PUS1
TMEM126AENSG00000171202.2219.77340304.25290-0.469302.433501.84170HepG2QKI
TMEM126AENSG00000171202.2221.66350312.63200-0.496102.836102.28960HepG2NELFE
TMEM126AENSG00000171202.2188.28010291.15780-0.628903.934403.21640HepG2RECQL
TMEM126AENSG00000171202.2158.21180248.35320-0.650504.112103.46420HepG2SRSF9
TMEM126AENSG00000171202.286.21190139.72000-0.696602.419601.40010HepG2STIP1
TMEM126AENSG00000171202.2173.21020290.80150-0.747505.164404.36000HepG2SUCLG1
TMEM126AENSG00000171202.288.65040128.85790-0.539601.723801.30920HepG2TIAL1
TMEM126AENSG00000171202.2167.91500267.83510-0.673602.598301.78790HepG2UBE2L3
TMEM126AENSG00000171202.2161.5037083.097100.958604.931104.17100HepG2UTP3
TMEM126AENSG00000171202.2457.84070231.320400.9849011.5238010.46020K562AGGF1
TMEM126AENSG00000171202.2477.78600240.696800.9890010.042008.69500K562AKAP8L
TMEM126AENSG00000171202.2843.93750602.843700.485303.518402.87240K562AQR
TMEM126AENSG00000171202.2385.44010252.544200.609904.659903.43930K562ATP5C1
TMEM126AENSG00000171202.2252.99220360.44650-0.510703.028101.64580K562BCCIP
TMEM126AENSG00000171202.2336.01600251.620000.417202.274701.33600K562DDX3X
TMEM126AENSG00000171202.2418.83030263.740800.667106.068805.15600K562DDX47
TMEM126AENSG00000171202.2360.35400259.022700.476203.011402.09090K562DKC1
TMEM126AENSG00000171202.2290.45770162.405700.838605.669304.42810K562FIP1L1
TMEM126AENSG00000171202.2573.35750451.735900.343902.003201.35440K562GRSF1
TMEM126AENSG00000171202.2298.52920139.573801.096704.447302.79140K562HNRNPA2B1
TMEM126AENSG00000171202.2241.23740133.608400.852304.568303.34850K562HNRNPM
TMEM126AENSG00000171202.2388.43240220.149100.819104.273503.28990K562HSPD1
TMEM126AENSG00000171202.2417.72540255.448200.709405.400304.16670K562KIF1C
TMEM126AENSG00000171202.2389.91480244.519700.673104.211602.80260K562MAK16
TMEM126AENSG00000171202.2390.20940200.580400.960003.892202.79720K562NAA15
TMEM126AENSG00000171202.2253.87210122.019401.056903.792302.58230K562PABPN1
TMEM126AENSG00000171202.2316.97260184.402100.781403.981602.97350K562PPIG
TMEM126AENSG00000171202.2555.33670253.858101.1292011.8608010.29840K562PRPF8
TMEM126AENSG00000171202.2107.33670170.63910-0.668802.282901.46870K562PSIP1
TMEM126AENSG00000171202.2738.35350238.723101.6289026.5652024.87740K562PUS1
TMEM126AENSG00000171202.2438.25880232.584900.913909.297908.23400K562RBM15
TMEM126AENSG00000171202.2440.81450258.601800.769305.092703.98120K562RPS19
TMEM126AENSG00000171202.2234.84650111.550601.073903.294401.95080K562SF1
TMEM126AENSG00000171202.2272.66600128.170101.089003.900902.34790K562SNRNP200
TMEM126AENSG00000171202.296.62260159.42220-0.722402.610801.59420K562SRSF4
TMEM126AENSG00000171202.2314.08450153.269501.035003.411901.76740K562SUPT6H
TMEM126AENSG00000171202.2245.67230377.46720-0.619604.564802.40930K562UPF2
TMEM126AENSG00000171202.2321.78070150.791301.093404.153702.01470K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMEM126A is not available on ENCORE database.





13 RBPs can affect the splicing of TMEM126A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETMEM126AENSG00000171202.2chr11+853612928536138585359030853591338536510685365278-0.272000.000000.00009excludedK562SF3B4
SETMEM126AENSG00000171202.2chr11+853612928536138585359010853591338536510685365300-0.314000.002250.02772excludedHepG2U2AF2
SETMEM126AENSG00000171202.2chr11+853612928536138585359010853591338536510685365278-0.239000.000000.00000excludedK562AQR
SETMEM126AENSG00000171202.2chr11+8536129285361385853590108535913385365106853653000.184000.000020.00143includedK562FXR1
SETMEM126AENSG00000171202.2chr11+853612928536138585359010853591338536510685365278-0.215000.000080.01147excludedK562SUPV3L1
SETMEM126AENSG00000171202.2chr11+853612928536138585359010853591338536510685365300-0.312000.000020.00066excludedK562PUS1
SETMEM126AENSG00000171202.2chr11+853612928536138585359031853591338536510685365300-0.435000.000000.00000excludedK562U2AF1
SETMEM126AENSG00000171202.2chr11+853612928536138585359031853591338536510685365300-0.288000.000030.00795excludedK562SRSF7
SETMEM126AENSG00000171202.2chr11+853612928536138585359031853591338536510685365300-0.277000.000950.03299excludedK562UTP18
SETMEM126AENSG00000171202.2chr11+853612928536138585359031853591338536510685365300-0.514000.000000.00000excludedK562U2AF2
SETMEM126AENSG00000171202.2chr11+853612928536138585359031853591338536510685365300-0.349000.000010.00051excludedK562RBM15
SETMEM126AENSG00000171202.2chr11+853612928536138585359010853591338536510685365278-0.394000.000820.03459excludedK562SF3B1
SETMEM126AENSG00000171202.2chr11+853612928536138585359010853591338536510685365278-0.130000.000010.00302excludedK562ZC3H8
SETMEM126AENSG00000171202.2chr11+853612928536138585359031853591338536510685365300-0.238000.000020.03954excludedK562PABPC4
A3SSTMEM126AENSG00000171202.2chr11+8536508485365278853651068536527885361233853613850.079000.000030.00028longerK562AQR
A5SSTMEM126AENSG00000171202.2chr11+853650798536530085365079853652788536663785366752-0.062000.000410.00886shorterK562AQR
MXETMEM126AENSG00000171202.2chr11+8536129285361385853650848536527885359010853591338536663785366752-0.116000.000000.000002includedK562AQR
MXETMEM126AENSG00000171202.2chr11+8536129285361385853650798536530085359031853591338536663785366752-0.168000.000010.000112includedK562AQR
MXETMEM126AENSG00000171202.2chr11+8536129285361385853650798536527885359031853591338536663785366752-0.201000.000000.000002includedK562AQR
MXETMEM126AENSG00000171202.2chr11+8536129285361385853650848536527885359010853591338536663785366752-0.091000.003010.044332includedK562SF3B4
MXETMEM126AENSG00000171202.2chr11+8536129285361385853651688536527885359031853591338536663785366752-0.124000.000800.020462includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TMEM126A is not avaliable on ENCORE database.