GOSR2

General Information

Gene Name : GOSR2
Gene ID : ENSG00000108433.16
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GOSR2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GOSR2	ENSG00000108433.16	22.00	24.28	23.14	ENCSR000AEF
HepG2	GOSR2	ENSG00000108433.16	37.87	45.94	41.91	ENCSR985KAT
K562	GOSR2	ENSG00000108433.16	29.61	29.55	29.58	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GOSR2 is not avaliable on ENCORE database.

Proteins bound to RNA

GOSR2 RNA is bound by 31 proteins.

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eCLIP assay for GOSR2 is not avaliable on ENCORE database.

31 proteins are bound to GOSR2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	45017438	45017527	+	intron-Distal	3.62435	41.99353	K562	UPF1
chr17	45016838	45016912	+	3'-UTR,intron-Distal	4.06456	37.13355	K562	UPF1
chr17	45016987	45017098	+	3'-UTR,intron-Distal	3.35329	32.36957	K562	UPF1
chr17	45016172	45016224	+	3'-UTR,intron-Distal	4.96264	32.02430	K562	TARDBP
chr17	45017450	45017530	+	intron-Distal	3.25195	27.72430	HepG2	PCBP2
chr17	45016593	45016670	+	3'-UTR,intron-Distal	4.88498	25.53334	K562	UPF1
chr17	45017428	45017520	+	intron-Distal	3.54246	25.25021	HepG2	PTBP1
chr17	45016224	45016313	+	3'-UTR,intron-Distal,polyA_site	4.67461	24.37861	K562	TARDBP
chr17	45015945	45015994	+	CDS,intron-Proximal	3.82461	23.73826	HepG2	U2AF2
chr17	45017748	45017786	+	intron-Distal	5.46961	17.60288	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 81 entries

eCLIP assay for GOSR2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GOSR2 is not available on ENCORE database.
70 RBPs can affect the levels of GOSR2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GOSR2 is not available on ENCORE database.

70 RBPs can affect the gene expression of GOSR2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GOSR2	ENSG00000108433.11	2206.59910	1286.14570	0.77870	23.65850	21.81440	K562	UPF1
GOSR2	ENSG00000108433.11	381.67000	804.80470	-1.07630	12.00980	10.75820	HepG2	GPKOW
GOSR2	ENSG00000108433.11	1084.05570	1634.20200	-0.59210	11.62180	10.55290	K562	AGGF1
GOSR2	ENSG00000108433.11	1595.70780	879.40740	0.85950	10.41080	8.79930	K562	RPS19
GOSR2	ENSG00000108433.11	1097.94310	1643.13480	-0.58160	9.42320	8.35250	K562	RBM15
GOSR2	ENSG00000108433.11	343.47460	590.27110	-0.78120	9.20120	8.27430	HepG2	TAF15
GOSR2	ENSG00000108433.11	988.70090	656.68090	0.59020	8.64580	7.91600	HepG2	SRSF1
GOSR2	ENSG00000108433.11	1133.82480	728.98100	0.63710	9.32820	7.86980	K562	EIF3G
GOSR2	ENSG00000108433.11	901.72090	532.86010	0.75880	9.00260	7.85260	HepG2	DDX21
GOSR2	ENSG00000108433.11	908.82700	604.29230	0.58870	8.24870	7.40860	HepG2	PTBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 79 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GOSR2 is not available on ENCORE database.

17 RBPs can affect the splicing of GOSR2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	GOSR2	ENSG00000108433.11	chr17	+	45012394	45012535			45009432	45009565	45015964	45016277	-0.11300	0.00000	0.00002	excluded	HepG2	U2AF1
SE	GOSR2	ENSG00000108433.11	chr17	+	45012394	45012535			45009432	45009565	45015964	45016277	-0.11000	0.00000	0.00006	excluded	HepG2	U2AF2
SE	GOSR2	ENSG00000108433.11	chr17	+	45009432	45009565			45006885	45006950	45012394	45012535	-0.19400	0.00000	0.00000	excluded	HepG2	SRSF7
A5SS	GOSR2	ENSG00000108433.11	chr17	+	45012374	45012591			45012374	45012535	45015964	45016277	0.13000	0.00000	0.00000	longer	K562	AQR
MXE	GOSR2	ENSG00000108433.11	chr17	+	45009432	45009565	45012394	45012535	45006885	45006950	45015964	45016070	0.25800	0.00000	0.00003	1included	HepG2	U2AF1
MXE	GOSR2	ENSG00000108433.11	chr17	+	45008464	45008573	45009432	45009565	45006885	45006950	45015964	45016070	-0.29900	0.00000	0.00000	2included	HepG2	U2AF1
MXE	GOSR2	ENSG00000108433.11	chr17	+	45008464	45008573	45009432	45009565	45006885	45006950	45012394	45014205	0.13400	0.00000	0.00012	1included	K562	PUS1
MXE	GOSR2	ENSG00000108433.11	chr17	+	45009432	45009565	45012394	45012535	45006885	45006950	45015964	45016070	0.28700	0.00000	0.00000	1included	HepG2	U2AF2
A3SS	GOSR2	ENSG00000108433.11	chr17	+	45008417	45008573			45008464	45008573	45006794	45006950	0.05200	0.00001	0.00006	longer	K562	AQR
A5SS	GOSR2	ENSG00000108433.11	chr17	+	45012394	45012591			45012394	45012535	45015964	45016277	0.11600	0.00001	0.00261	longer	K562	EFTUD2

Showing 1 to 10 of 34 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GOSR2

General Information

Functions

Localization

Domains (AlphaFold: GOSR2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GOSR2 is not avaliable on ENCORE database.

31 proteins are bound to GOSR2 RNA:

eCLIP assay for GOSR2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GOSR2 is not available on ENCORE database.

70 RBPs can affect the gene expression of GOSR2 :

The Knockdown/knockout RNA-Seq assay for GOSR2 is not available on ENCORE database.

17 RBPs can affect the splicing of GOSR2 :

The Knockdown/knockout RNA-Seq assay for GOSR2 is not avaliable on ENCORE database.