STARD3NL

General Information

Gene Name       : STARD3NL
Gene ID             : ENSG00000010270.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: STARD3NL)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878STARD3NLENSG00000010270.1357.7854.5456.16ENCSR000AEF
HepG2STARD3NLENSG00000010270.1326.8439.5133.17ENCSR985KAT
K562STARD3NLENSG00000010270.1336.6736.0136.34ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for STARD3NL is not avaliable on ENCORE database.



Proteins bound to RNA
  • STARD3NL RNA is bound by 6 proteins.  







eCLIP assay for STARD3NL is not avaliable on ENCORE database.





6 proteins are bound to STARD3NL RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr73826957838269597+3'-UTR4.6212814.12425K562YBX3
chr73826965738269721+3'-UTR3.235343.86052K562YBX3
chr73824704438247212+3'-UTR,CDS,intron-Proximal3.109954.03406K562DDX3X
chr73826954938269578+3'-UTR3.7262312.97270K562YBX3
chr73826954138269549+3'-UTR3.771989.88356K562YBX3
chr73826992338269988+3'-UTR3.343594.46957K562TIA1
chr73821787338217926+5'-UTR5.058714.53658HepG2DDX3X
chr73821797138218020+5'-UTR4.6516512.43092HepG2DDX3X
chr73821798438218055+5'-UTR,intron-Proximal3.425837.35853HepG2PRPF8
chr73821788438218020+5'-UTR4.396404.66602K562DDX3X
chr73821795138218258+5'-UTR,intron-Distal,intron-Proximal3.419625.66421K562PRPF8
chr73825680138256833+CDS4.440288.34773K562YBX3
chr73826838038268436+CDS,intron-Proximal3.764433.21003K562U2AF2
chr73825678938256801+CDS3.925955.15749K562YBX3
chr73823684138236882+intron-Distal3.214823.34990HepG2PTBP1
chr73823683238236886+intron-Distal5.881729.95676K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for STARD3NL is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for STARD3NL is not available on ENCORE database.

  • 60 RBPs can affect the levels of STARD3NL.  








The Knockdown/knockout RNA-Seq assay for STARD3NL is not available on ENCORE database.





60 RBPs can affect the gene expression of STARD3NL :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
STARD3NLENSG00000010270.91362.935501085.839700.327801.827101.38470HepG2AKAP1
STARD3NLENSG00000010270.9645.58880454.732200.505503.197702.08100HepG2AKAP8
STARD3NLENSG00000010270.91215.76840885.160100.457806.635705.64390HepG2AUH
STARD3NLENSG00000010270.9708.72510491.832500.527004.762403.78490HepG2CALR
STARD3NLENSG00000010270.9331.15640470.41610-0.506403.989602.76360HepG2YBX3
STARD3NLENSG00000010270.9368.84330588.45720-0.673907.537706.52210HepG2DKC1
STARD3NLENSG00000010270.9589.30930461.928600.351302.560901.87990HepG2DNAJC21
STARD3NLENSG00000010270.9625.79710859.01230-0.457002.693002.10820HepG2EIF2S1
STARD3NLENSG00000010270.9318.25960478.35840-0.587904.667603.17170HepG2EIF2S2
STARD3NLENSG00000010270.9881.56960636.882900.468902.560801.81720HepG2FIP1L1
STARD3NLENSG00000010270.9668.50080943.09900-0.496503.754902.70690HepG2G3BP2
STARD3NLENSG00000010270.9190.49390488.81880-1.3596013.6254012.30890HepG2GPKOW
STARD3NLENSG00000010270.9487.43880653.50880-0.423003.595302.78670HepG2HNRNPF
STARD3NLENSG00000010270.9690.33070899.41190-0.381702.523101.85450HepG2HNRNPK
STARD3NLENSG00000010270.9418.54550643.52510-0.620605.801504.79260HepG2IGF2BP1
STARD3NLENSG00000010270.9643.99880903.17380-0.487903.539502.78550HepG2IGF2BP2
STARD3NLENSG00000010270.9662.62180908.36240-0.455102.491101.54890HepG2KHSRP
STARD3NLENSG00000010270.9552.96910803.73420-0.539503.363802.44790HepG2LARP4
STARD3NLENSG00000010270.9606.20340958.00190-0.660205.910304.96290HepG2MAGOH
STARD3NLENSG00000010270.9769.54840986.12130-0.357801.822801.30220HepG2NCBP2
STARD3NLENSG00000010270.9307.19840413.60620-0.429102.036001.38940HepG2NSUN2
STARD3NLENSG00000010270.9637.07650762.53280-0.259302.097701.55760HepG2PCBP1
STARD3NLENSG00000010270.9540.53330416.938400.374402.078701.37440HepG2PRPF8
STARD3NLENSG00000010270.9388.94310872.39770-1.1654021.1909019.44750HepG2PUM2
STARD3NLENSG00000010270.91467.14630849.388100.7884016.4353015.38690HepG2RBM22
STARD3NLENSG00000010270.9731.73710863.49470-0.238901.845001.38360HepG2NELFE
STARD3NLENSG00000010270.9654.02010804.15460-0.298102.412701.83180HepG2RECQL
STARD3NLENSG00000010270.9540.83250412.449200.390902.049801.36300HepG2RRP9
STARD3NLENSG00000010270.9641.55970788.56240-0.297602.697302.00260HepG2SLBP
STARD3NLENSG00000010270.9303.15740544.69150-0.845403.402501.62570HepG2SLTM
STARD3NLENSG00000010270.9854.59030513.768100.734004.727103.69310HepG2SNRNP70
STARD3NLENSG00000010270.91414.01960959.373600.5595011.0821010.26030HepG2SRFBP1
STARD3NLENSG00000010270.9496.15100360.576200.460402.816001.81110HepG2TFIP11
STARD3NLENSG00000010270.9380.90020500.73390-0.394602.609602.12140HepG2TIAL1
STARD3NLENSG00000010270.9724.56980544.722300.411502.220901.65190HepG2U2AF1
STARD3NLENSG00000010270.9528.06250850.44540-0.687505.451204.25470HepG2UBE2L3
STARD3NLENSG00000010270.9611.50420481.022400.346202.880702.16990HepG2UPF1
STARD3NLENSG00000010270.9748.49360529.030000.500506.547305.79980HepG2ZNF622
STARD3NLENSG00000010270.91233.656401019.112800.275502.720402.15620K562AGGF1
STARD3NLENSG00000010270.91327.945701060.429500.324402.506101.88400K562AKAP8L
STARD3NLENSG00000010270.9831.846101295.48640-0.639106.934106.07380K562AQR
STARD3NLENSG00000010270.9586.23660903.29400-0.623708.624306.65260K562CPEB4
STARD3NLENSG00000010270.91183.966201721.64860-0.540207.573605.98630K562CELF1
STARD3NLENSG00000010270.9302.99740552.04850-0.8655011.594909.04290K562DDX27
STARD3NLENSG00000010270.9710.17010934.79610-0.396504.310603.52270K562DDX47
STARD3NLENSG00000010270.91423.978001141.120400.319403.495802.49460K562DKC1
STARD3NLENSG00000010270.9350.99190570.05820-0.699704.377002.73190K562EEF2
STARD3NLENSG00000010270.9643.15060833.54110-0.374103.456702.66670K562EIF2S2
STARD3NLENSG00000010270.9540.04220716.08610-0.407103.676302.76780K562EIF3G
STARD3NLENSG00000010270.91079.120401400.17480-0.375804.391603.21940K562EIF4G2
STARD3NLENSG00000010270.9455.07860607.39070-0.416502.730801.94120K562GPKOW
STARD3NLENSG00000010270.9806.48500597.353000.433002.700901.78330K562HNRNPM
STARD3NLENSG00000010270.91336.65040984.595400.440903.818702.88800K562HSPD1
STARD3NLENSG00000010270.9736.79290982.80110-0.415602.519201.55510K562IGF2BP2
STARD3NLENSG00000010270.91363.067801125.393200.276302.059301.35820K562KIF1C
STARD3NLENSG00000010270.9839.489901031.10230-0.296602.232601.41160K562MATR3
STARD3NLENSG00000010270.9488.84240665.34970-0.444704.411103.41010K562MTPAP
STARD3NLENSG00000010270.91208.78120883.674400.451902.526401.69210K562NAA15
STARD3NLENSG00000010270.9747.03170536.020900.478803.454002.61510K562PRPF8
STARD3NLENSG00000010270.91098.740401592.11910-0.535108.371606.67530K562PUM2
STARD3NLENSG00000010270.91659.246401051.680600.657707.838606.97130K562PUS1
STARD3NLENSG00000010270.9623.27120962.63090-0.627106.457905.10190K562RBM22
STARD3NLENSG00000010270.9370.75710729.45970-0.9764015.7802013.95870K562SF3A3
STARD3NLENSG00000010270.9444.99460733.57200-0.721208.882805.99290K562SLTM
STARD3NLENSG00000010270.9769.76500983.98540-0.354202.769702.06290K562SRSF1
STARD3NLENSG00000010270.9688.81430995.92310-0.531904.760503.82440K562TARDBP
STARD3NLENSG00000010270.9735.54390960.66310-0.385203.308702.40250K562TIA1
STARD3NLENSG00000010270.91285.742001722.46150-0.421904.292802.54240K562UBE2L3
STARD3NLENSG00000010270.9486.87980670.73000-0.462203.744302.72630K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for STARD3NL is not available on ENCORE database.





18 RBPs can affect the splicing of STARD3NL :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESTARD3NLENSG00000010270.9chr7+382566253825667938254628382547063825678838256906-0.136000.003690.05869excludedK562SF3B4
SESTARD3NLENSG00000010270.9chr7+382566253825667938254628382547063825678838256906-0.125000.000700.04575excludedHepG2RBM22
SESTARD3NLENSG00000010270.9chr7+382566253825667938254628382547063825678838256906-0.198000.001720.03227excludedHepG2U2AF1
SESTARD3NLENSG00000010270.9chr7+382186913821874738217952382180223824704738247330-0.170000.000000.00000excludedK562AKAP8L
SESTARD3NLENSG00000010270.9chr7+382186913821874738217952382180223824704738247330-0.125000.000160.00301excludedHepG2U2AF2
SESTARD3NLENSG00000010270.9chr7+3825662538256679382546283825470638256788382569060.087000.000300.02402includedHepG2AKAP1
SESTARD3NLENSG00000010270.9chr7+382566253825667938254628382547063825678838256906-0.122000.002170.02350excludedK562AQR
SESTARD3NLENSG00000010270.9chr7+382186913821874738217952382180223824704738247330-0.123000.000010.00023excludedK562PUS1
SESTARD3NLENSG00000010270.9chr7+382566253825667938254628382547063825678838256906-0.190000.000000.00162excludedK562APOBEC3C
SESTARD3NLENSG00000010270.9chr7+3821869138218747382179523821802238247047382473300.177000.000010.00110includedHepG2MATR3
SESTARD3NLENSG00000010270.9chr7+382186913821874738217952382180223824704738247330-0.122000.000490.01269excludedK562U2AF1
SESTARD3NLENSG00000010270.9chr7+382566253825667938254628382547063825678838256906-0.229000.000040.00161excludedK562U2AF1
SESTARD3NLENSG00000010270.9chr7+3821869138218747382179523821802238247047382473300.106000.004390.08020includedHepG2SRSF1
SESTARD3NLENSG00000010270.9chr7+382413143824156738217991382180223824704738247330-0.060000.000940.08792excludedHepG2RBFOX2
SESTARD3NLENSG00000010270.9chr7+382566253825667938254628382547063825678838256906-0.160000.000020.00626excludedK562RBM22
SESTARD3NLENSG00000010270.9chr7+382186913821874738217952382180223824704738247330-0.115000.000160.00845excludedK562UTP18
SESTARD3NLENSG00000010270.9chr7+382566253825667938254628382547063825678838256906-0.205000.000940.01896excludedK562U2AF2
SESTARD3NLENSG00000010270.9chr7+382186913821874738217952382180223824704738247330-0.118000.000120.00506excludedK562RBM15
SESTARD3NLENSG00000010270.9chr7+382566253825667938254628382547063825678838256906-0.194000.000080.00367excludedK562AGGF1
SESTARD3NLENSG00000010270.9chr7+382186913821874738217952382180223824704738247330-0.124000.000030.00147excludedK562AGGF1
SESTARD3NLENSG00000010270.9chr7+382566253825667938254628382547063825678838256906-0.190000.000000.00009excludedK562HNRNPK
SESTARD3NLENSG00000010270.9chr7+382566253825667938254628382547063825678838256906-0.113000.000590.02651excludedK562PTBP1
SESTARD3NLENSG00000010270.9chr7+382566253825667938254628382547063825678838256906-0.226000.001480.02654excludedK562HNRNPC
RISTARD3NLENSG00000010270.9chr7+382546283825690638254628382547063825678838256906-0.212000.002010.03695excludedK562PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for STARD3NL is not avaliable on ENCORE database.