CYFIP2

General Information

Gene Name       : CYFIP2
Gene ID             : ENSG00000055163.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CYFIP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CYFIP2ENSG00000055163.1945.1759.7552.46ENCSR000AEF
HepG2CYFIP2ENSG00000055163.1934.2621.6127.93ENCSR985KAT
K562CYFIP2ENSG00000055163.191.301.451.38ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CYFIP2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CYFIP2 RNA is bound by 6 proteins.  







eCLIP assay for CYFIP2 is not avaliable on ENCORE database.





6 proteins are bound to CYFIP2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5156723738156723821+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.469285.62208HepG2PRPF8
chr5156723686156723786+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.638485.90680HepG2PPIG
chr5156757828156757908+3'-UTR,5'-UTR,CDS,intron-Proximal4.683714.35676HepG2PRPF8
chr5156729828156729898+3'-UTR,5'-UTR,CDS,intron-Distal4.419604.50440HepG2PPIG
chr5156731245156731362+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.059435.69345HepG2BCLAF1
chr5156768085156768167+3'-UTR,CDS,intron-Proximal3.097813.41665HepG2GRWD1
chr5156727720156727777+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.752896.21892HepG2PPIG
chr5156734865156734914+3'-UTR,5'-UTR,CDS,intron-Proximal3.521674.50321HepG2PRPF8
chr5156693122156693212+5'-UTR,intron-Proximal4.531497.51958HepG2DDX3X
chr5156714038156714116+5'-UTR,CDS,intron-Distal,intron-Proximal3.398693.86355HepG2PPIG
chr5156736776156736886+5'-UTR,CDS,intron-Proximal6.0015018.53372HepG2PRPF8
chr5156714042156714122+5'-UTR,CDS,intron-Distal,intron-Proximal4.636815.42152HepG2GRWD1
chr5156742083156742144+5'-UTR,CDS,intron-Proximal4.302234.45914HepG2PRPF8
chr5156734361156734431+intron-Distal4.3811310.01505HepG2XPO5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CYFIP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CYFIP2 is not available on ENCORE database.

  • 101 RBPs can affect the levels of CYFIP2.  








The Knockdown/knockout RNA-Seq assay for CYFIP2 is not available on ENCORE database.





101 RBPs can affect the gene expression of CYFIP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CYFIP2ENSG00000055163.142650.635801609.804200.719408.842507.30310HepG2ABCF1
CYFIP2ENSG00000055163.14971.099301298.45740-0.419106.405005.55860HepG2ACO1
CYFIP2ENSG00000055163.141338.302201012.551000.402303.215702.14430HepG2ADAR
CYFIP2ENSG00000055163.142260.024101833.098100.302004.063103.26100HepG2AUH
CYFIP2ENSG00000055163.142723.174601443.724700.9154018.1666016.83250HepG2BOP1
CYFIP2ENSG00000055163.141549.503801205.985600.361503.162201.84800HepG2BUD13
CYFIP2ENSG00000055163.141505.862501229.576100.292302.665801.90820HepG2CALR
CYFIP2ENSG00000055163.142716.625101745.808300.637805.649804.23010HepG2CCAR1
CYFIP2ENSG00000055163.142149.287201297.993900.7275022.6194021.12660HepG2CKAP4
CYFIP2ENSG00000055163.141892.226801325.444200.513505.553504.61120HepG2CPSF6
CYFIP2ENSG00000055163.141325.755401038.384400.352403.868002.65900HepG2YBX3
CYFIP2ENSG00000055163.141308.94660661.159700.9852012.0106010.03770HepG2CSTF2
CYFIP2ENSG00000055163.141108.200201523.35260-0.459006.658705.74430HepG2CELF1
CYFIP2ENSG00000055163.141625.783401200.803800.437008.322007.01310HepG2DDX19B
CYFIP2ENSG00000055163.142162.606201320.430300.7117011.204509.94860HepG2DDX21
CYFIP2ENSG00000055163.141673.298401292.963900.371903.858502.76800HepG2DDX24
CYFIP2ENSG00000055163.14941.872502237.07240-1.2480023.5844021.94310HepG2DDX3X
CYFIP2ENSG00000055163.14721.459601053.02950-0.545602.034401.36090HepG2DDX55
CYFIP2ENSG00000055163.14970.366701921.79340-0.9859012.9731011.75580HepG2DDX6
CYFIP2ENSG00000055163.141801.491801242.225000.5362010.272909.13480HepG2DKC1
CYFIP2ENSG00000055163.14835.957701010.64490-0.273802.876102.21350HepG2DNAJC2
CYFIP2ENSG00000055163.141455.919501130.393600.365002.588001.69380HepG2EEF2
CYFIP2ENSG00000055163.141339.570801847.36540-0.463703.953503.25280HepG2EIF2S1
CYFIP2ENSG00000055163.141572.957701247.481000.334403.204102.04880HepG2EIF3G
CYFIP2ENSG00000055163.143056.253802041.507000.582005.618004.70770HepG2EIF4A3
CYFIP2ENSG00000055163.142205.410801615.958600.448608.545907.22480HepG2EIF4G1
CYFIP2ENSG00000055163.141867.278901394.404200.421203.773102.50840HepG2ESF1
CYFIP2ENSG00000055163.141622.817001268.664000.355103.332302.41670HepG2EWSR1
CYFIP2ENSG00000055163.141662.005802059.94310-0.309702.128001.51750HepG2FXR1
CYFIP2ENSG00000055163.141529.064101910.82140-0.321502.059601.48170HepG2G3BP1
CYFIP2ENSG00000055163.141373.21890816.960700.749109.024207.45180HepG2GEMIN5
CYFIP2ENSG00000055163.141543.56420950.115000.700005.309203.76320HepG2GRSF1
CYFIP2ENSG00000055163.141533.031501144.955000.421003.932003.11590HepG2HNRNPC
CYFIP2ENSG00000055163.142262.950901631.834000.471609.140107.93500HepG2HNRNPF
CYFIP2ENSG00000055163.141397.135801935.06170-0.469904.691003.80260HepG2HNRNPK
CYFIP2ENSG00000055163.141886.940601433.920000.396003.334702.65060HepG2HNRNPLL
CYFIP2ENSG00000055163.14802.921901121.42960-0.482005.073903.82660HepG2HNRNPM
CYFIP2ENSG00000055163.141909.847701137.382800.7476020.6803019.13570HepG2HNRNPU
CYFIP2ENSG00000055163.142462.297301606.889700.615608.667207.45530HepG2IGF2BP1
CYFIP2ENSG00000055163.143148.129501942.280500.696609.433508.26980HepG2IGF2BP2
CYFIP2ENSG00000055163.143062.950201844.710800.731407.522506.14090HepG2LARP4
CYFIP2ENSG00000055163.141362.946302060.66290-0.596406.166005.19400HepG2MAGOH
CYFIP2ENSG00000055163.143131.510902072.172100.595605.989705.08710HepG2MATR3
CYFIP2ENSG00000055163.141089.372801315.42570-0.272002.108801.39760HepG2MSI2
CYFIP2ENSG00000055163.141942.061701462.255000.409302.187301.33270HepG2MTPAP
CYFIP2ENSG00000055163.141590.410802120.96380-0.415303.254702.56980HepG2NCBP2
CYFIP2ENSG00000055163.14455.03340938.05750-1.043707.829806.28760HepG2PABPC1
CYFIP2ENSG00000055163.141352.167601968.20630-0.5416011.5830010.47960HepG2PCBP1
CYFIP2ENSG00000055163.142385.237401376.368700.7932023.9512022.08760HepG2PRPF4
CYFIP2ENSG00000055163.141202.82410811.692700.567302.688801.89160HepG2PRPF8
CYFIP2ENSG00000055163.141152.417602002.66910-0.7973021.7721020.51890HepG2PTBP1
CYFIP2ENSG00000055163.141327.922401645.85810-0.309704.550703.83020HepG2PUM1
CYFIP2ENSG00000055163.141800.576602169.05610-0.268602.818602.18900HepG2QKI
CYFIP2ENSG00000055163.14619.367001402.15600-1.1788010.096008.81260HepG2RAVER1
CYFIP2ENSG00000055163.141312.531701806.09620-0.460506.094004.88220HepG2RBM15
CYFIP2ENSG00000055163.142501.137601759.094800.507709.733908.89690HepG2RBM22
CYFIP2ENSG00000055163.141622.447701968.51400-0.278902.463701.82360HepG2RBM25
CYFIP2ENSG00000055163.14689.62440991.25370-0.523403.112101.48510HepG2RBM47
CYFIP2ENSG00000055163.143934.515801757.898001.1622029.6961027.97940HepG2RPLP0
CYFIP2ENSG00000055163.142207.582401377.558100.680305.080503.82170HepG2RPS10
CYFIP2ENSG00000055163.142236.58810892.895901.3246037.0737035.26830HepG2RPS19
CYFIP2ENSG00000055163.142044.127601283.676800.671107.842206.53870HepG2RPS2
CYFIP2ENSG00000055163.142293.928901030.390501.1545015.0926013.28710HepG2RPS3A
CYFIP2ENSG00000055163.141162.52650802.869800.533902.492601.74320HepG2RRP9
CYFIP2ENSG00000055163.141107.954401419.33900-0.357302.773402.06560HepG2SF3B1
CYFIP2ENSG00000055163.141194.304602085.13470-0.8040022.4811021.06660HepG2SF3B4
CYFIP2ENSG00000055163.142600.434602176.389300.256703.492702.97740HepG2SRSF1
CYFIP2ENSG00000055163.142486.977201530.836400.7000020.1232018.64540HepG2SRSF5
CYFIP2ENSG00000055163.142131.907601603.225900.411107.047406.01850HepG2SRSF7
CYFIP2ENSG00000055163.14937.055501770.57430-0.9180027.8528026.44780HepG2SRSF9
CYFIP2ENSG00000055163.142867.526201725.035800.7331024.5080023.31760HepG2SSB
CYFIP2ENSG00000055163.14887.055301310.38030-0.562903.427402.08100HepG2SUB1
CYFIP2ENSG00000055163.142053.902601740.963500.238403.255902.59220HepG2SUCLG1
CYFIP2ENSG00000055163.141626.496401048.090600.633903.107002.39470HepG2SUPV3L1
CYFIP2ENSG00000055163.141956.586801397.437500.485505.180104.23230HepG2TARDBP
CYFIP2ENSG00000055163.141482.077401797.51870-0.278402.546801.74250HepG2TIA1
CYFIP2ENSG00000055163.143124.530201105.051501.4994061.6093059.83030HepG2TIAL1
CYFIP2ENSG00000055163.14827.060401115.06770-0.431105.884505.11610HepG2TRIM56
CYFIP2ENSG00000055163.14803.577001390.41960-0.7910010.325809.09450HepG2U2AF1
CYFIP2ENSG00000055163.142410.744301803.327500.418708.500507.38700HepG2UPF1
CYFIP2ENSG00000055163.141236.56490922.906800.422002.338701.33840HepG2XPO5
CYFIP2ENSG00000055163.14933.084201379.01520-0.563603.679702.20410HepG2XRCC5
CYFIP2ENSG00000055163.142157.476401358.261900.6675015.2904013.91690HepG2ZC3H8
CYFIP2ENSG00000055163.141445.132201983.31490-0.4567010.660609.76140HepG2ZNF622
CYFIP2ENSG00000055163.142.7973017.28190-2.627202.462901.35550K562AARS
CYFIP2ENSG00000055163.1483.88780193.85750-1.208507.602806.72800K562AGGF1
CYFIP2ENSG00000055163.14122.70680212.99850-0.795604.365003.06720K562AKAP8
CYFIP2ENSG00000055163.1452.31660201.71220-1.9470015.1436013.40830K562AKAP8L
CYFIP2ENSG00000055163.14114.34300211.63460-0.888205.580704.23030K562ATP5C1
CYFIP2ENSG00000055163.1494.9239038.716601.293704.310402.47350K562BUD13
CYFIP2ENSG00000055163.14126.28040231.68770-0.875604.778803.19570K562CCDC124
CYFIP2ENSG00000055163.1491.5728034.163701.422404.936103.89500K562CPSF6
CYFIP2ENSG00000055163.14148.52940217.09020-0.547502.702101.83910K562DKC1
CYFIP2ENSG00000055163.14435.3450043.885803.3102063.9219061.50460K562EIF2S2
CYFIP2ENSG00000055163.1493.9303042.488801.144403.371201.54300K562ESF1
CYFIP2ENSG00000055163.1490.7185034.767101.383604.460903.37250K562FMR1
CYFIP2ENSG00000055163.144.6600038.23920-3.036706.281705.42410K562FXR1
CYFIP2ENSG00000055163.14989.4283054.169604.19090119.73000116.17720K562HSPD1
CYFIP2ENSG00000055163.14105.56450214.08580-1.020103.911702.90850K562KIF1C
CYFIP2ENSG00000055163.14103.56920239.82750-1.211409.275607.41700K562MBNL1
CYFIP2ENSG00000055163.1487.86490168.10010-0.936003.485002.46880K562NAA15
CYFIP2ENSG00000055163.14204.2211092.854001.137003.882502.04800K562PPP1R8
CYFIP2ENSG00000055163.142.4703018.14080-2.876503.287202.56950K562PTBP1
CYFIP2ENSG00000055163.1432.26680200.08130-2.6325019.8133018.38790K562PUS1
CYFIP2ENSG00000055163.1457.95540194.91750-1.7498012.9905011.70360K562RBM15
CYFIP2ENSG00000055163.14122.6739055.474201.144803.543201.71840K562RBM17
CYFIP2ENSG00000055163.1472.5251014.917102.281406.631005.35730K562RPS19
CYFIP2ENSG00000055163.14165.7717087.077700.928702.771001.46980K562SFPQ
CYFIP2ENSG00000055163.1439.3189016.789701.227502.246501.31960K562SRSF5
CYFIP2ENSG00000055163.14236.8864098.116601.271504.841202.76880K562SUPT6H
CYFIP2ENSG00000055163.1477.1475032.709701.237802.150601.40050K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CYFIP2 is not available on ENCORE database.





2 RBPs can affect the splicing of CYFIP2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECYFIP2ENSG00000055163.14chr5+1567875621567876301567872891567873801567884751567886060.095000.000000.00014includedHepG2HNRNPK
SECYFIP2ENSG00000055163.14chr5+1567875621567876301567872891567873801567884751567886060.081000.000020.00399includedHepG2DDX6

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CYFIP2 is not avaliable on ENCORE database.