AGRN

General Information

Gene Name       : AGRN
Gene ID             : ENSG00000188157.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AGRN)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AGRNENSG00000188157.143.953.423.69ENCSR000AEF
HepG2AGRNENSG00000188157.1482.6622.2452.45ENCSR985KAT
K562AGRNENSG00000188157.1425.1512.9219.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AGRN is not avaliable on ENCORE database.



Proteins bound to RNA
  • AGRN RNA is bound by 83 proteins.  







eCLIP assay for AGRN is not avaliable on ENCORE database.





83 proteins are bound to AGRN RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1990425990499+3'-UTR3.052279.42983HepG2SUB1
chr1990874990911+3'-UTR,intron-Distal3.1392114.28749HepG2DDX3X
chr1990408990463+3'-UTR3.6235742.73142HepG2TIAL1
chr1991220991268+3'-UTR,intron-Proximal3.564047.10953K562NOLC1
chr1991368991458+3'-UTR3.829113.48745HepG2ILF3
chr1991333991394+3'-UTR4.5507315.75585HepG2PCBP2
chr1991147991188+3'-UTR,intron-Distal,intron-Proximal3.675994.90948K562METAP2
chr1990507990534+3'-UTR3.049174.17354K562DDX6
chr1991003991047+3'-UTR,intron-Distal3.4276910.96694HepG2UPF1
chr1990506990571+3'-UTR5.2889736.10248HepG2UPF1
chr1991113991198+3'-UTR,intron-Distal,intron-Proximal4.470007.83342HepG2SUB1
chr1991428991488+3'-UTR3.306863.67652K562APOBEC3C
chr1990432990493+3'-UTR3.440667.90229HepG2TIA1
chr1991226991291+3'-UTR,intron-Proximal3.470138.67784K562UPF1
chr1990662990723+3'-UTR,intron-Distal,intron-Proximal3.6571915.75107HepG2UPF1
chr1991128991175+3'-UTR,intron-Distal3.175127.05053K562NOLC1
chr1991207991273+3'-UTR,intron-Proximal4.1475212.11519K562DDX55
chr1990431990503+3'-UTR3.0601615.59288K562DDX6
chr1991446991467+3'-UTR4.018475.50459HepG2ZC3H11A
chr1990844990925+3'-UTR,intron-Distal4.6818032.82209HepG2UPF1
chr1991128991194+3'-UTR,intron-Distal,intron-Proximal3.056698.31767HepG2AKAP1
chr1990430990479+3'-UTR3.706153.09957HepG2AQR
chr1991045991100+3'-UTR,intron-Distal3.2441110.56021HepG2DDX3X
chr1990424990491+3'-UTR3.8195025.43274K562DDX24
chr1991223991299+3'-UTR,intron-Proximal4.336955.46178K562ZC3H11A
chr1990506990576+3'-UTR3.729674.62153HepG2LIN28B
chr1991226991260+3'-UTR,intron-Proximal4.419926.71581HepG2SUB1
chr1990595990641+3'-UTR,intron-Proximal3.359794.88494K562DHX30
chr1990510990560+3'-UTR3.584213.37264K562LSM11
chr1990837990911+3'-UTR,intron-Distal3.2658214.81107HepG2AKAP1
chr1991217991268+3'-UTR,intron-Proximal4.4754510.12999K562PABPC4
chr1991223991265+3'-UTR,intron-Proximal4.489558.75828HepG2AKAP1
chr1991403991444+3'-UTR4.1632012.08426HepG2PCBP2
chr1990409990453+3'-UTR3.7633064.36394HepG2DDX55
chr1990433990480+3'-UTR3.133686.02034K562APOBEC3C
chr1991218991273+3'-UTR,intron-Proximal4.2096550.05513HepG2DDX55
chr1990453990507+3'-UTR3.5143360.39079HepG2DDX55
chr1990519990556+3'-UTR3.4760811.28845HepG2DDX55
chr1990411990506+3'-UTR4.18982400.00000HepG2UPF1
chr1990572990642+3'-UTR,intron-Proximal3.9111921.63590HepG2UPF1
chr1990464990488+3'-UTR3.2511935.55741HepG2TIAL1
chr1991213991273+3'-UTR,intron-Proximal3.2956718.71801HepG2LARP4
chr1990431990489+3'-UTR3.1802212.38536HepG2SDAD1
chr1991220991286+3'-UTR,intron-Proximal4.250957.45535K562DDX6
chr1991194991275+3'-UTR,intron-Proximal3.0844616.51813HepG2PCBP2
chr1991123991204+3'-UTR,intron-Distal,intron-Proximal3.7696542.85752HepG2DDX55
chr1990403990429+3'-UTR5.0327919.80419K562PUM2
chr1991140991194+3'-UTR,intron-Distal,intron-Proximal3.970816.10902HepG2PCBP1
chr1990506990564+3'-UTR4.443308.27548K562UPF1
chr1990411990511+3'-UTR3.4450638.41566HepG2AKAP1
chr1991127991201+3'-UTR,intron-Distal,intron-Proximal3.1717511.63412HepG2UPF1
chr1990359990403+3'-UTR4.8183113.81544K562PUM2
chr1990781990826+3'-UTR,intron-Distal3.2694011.72115HepG2UPF1
chr1955515955586+5'-UTR,CDS4.2311159.08015HepG2DDX3X
chr1978617978664+CDS,intron-Proximal3.127035.59887K562METAP2
chr1987317987401+CDS,intron-Distal,intron-Proximal3.501378.91991K562PRPF8
chr1987135987202+CDS,intron-Proximal3.135726.88270K562SF3B4
chr1988778988847+CDS,intron-Distal,intron-Proximal3.163707.10011K562RBFOX2
chr1985353985379+CDS3.026825.72779HepG2EIF3H
chr1981150981205+CDS3.1506217.77637HepG2PPIG
chr1977052977073+CDS3.139156.74038HepG2PPIG
chr1985313985365+CDS3.3674210.14475HepG2SDAD1
chr1986144986216+CDS3.6252013.30583HepG2PPIG
chr1984537984626+CDS,intron-Proximal4.135144.12529K562GTF2F1
chr1957578957694+CDS,intron-Proximal3.5887532.29160HepG2DDX3X
chr1987163987193+CDS4.5381212.68282HepG2PPIG
chr1981085981151+CDS,intron-Proximal3.3159611.83363K562AQR
chr1984236984289+CDS,intron-Proximal5.830029.60578HepG2AQR
chr1989355989407+CDS,intron-Proximal3.9087211.57027HepG2PRPF8
chr1983711983733+CDS3.570897.91657HepG2PPIG
chr1980608980658+CDS,intron-Proximal3.775838.41482K562METAP2
chr1976710976734+CDS3.803388.46997HepG2PPIG
chr1985588985633+CDS,intron-Proximal4.096407.90583K562AQR
chr1978916978960+CDS,intron-Proximal4.656634.75028K562FXR2
chr1981369981431+CDS4.6491413.91399HepG2LIN28B
chr1984617984685+CDS3.417973.95762K562SND1
chr1986153986200+CDS3.760523.90018HepG2SND1
chr1976501976572+CDS,intron-Proximal4.3034411.31016HepG2FAM120A
chr1980593980660+CDS,intron-Proximal3.241605.14111HepG2NIP7
chr1983155983205+CDS,intron-Proximal3.6655211.94646HepG2PPIG
chr1988773988849+CDS,intron-Distal,intron-Proximal3.690997.32796HepG2DROSHA
chr1981485981555+CDS,intron-Proximal5.4415033.39502HepG2EFTUD2
chr1986178986254+CDS,intron-Proximal3.266593.90373HepG2AQR
chr1980564980629+CDS4.4688723.91264K562DDX24
chr1982331982431+CDS,intron-Proximal3.317559.11199K562PRPF8
chr1976042976067+CDS,intron-Proximal3.082406.02419K562AQR
chr1978917978976+CDS,intron-Proximal5.2472214.11312K562DDX24
chr1982335982425+CDS,intron-Proximal3.6795515.29211K562BUD13
chr1981729981783+CDS,intron-Proximal3.037089.11985HepG2SF3B4
chr1976052976107+CDS4.349809.08078HepG2RPS3
chr1990318990358+CDS3.696187.25768HepG2RPS3
chr1985910985943+CDS4.0155211.19852K562DDX24
chr1985299985346+CDS3.316033.24192HepG2SND1
chr1981368981432+CDS3.742229.48280K562LIN28B
chr1982273982338+CDS,intron-Proximal3.355557.79680K562RBM15
chr1983006983066+CDS3.6267119.59710K562DDX24
chr1955591955703+CDS3.028719.94661HepG2RPS3
chr1982086982108+CDS4.674034.78571K562UCHL5
chr1981109981214+CDS,intron-Proximal5.2978558.99749K562DDX24
chr1987320987375+CDS,intron-Distal,intron-Proximal4.278638.61283HepG2SF3B4
chr1986890986918+CDS4.243749.53524K562DDX24
chr1985283985332+CDS3.135429.66635HepG2PPIG
chr1989085989154+CDS,intron-Proximal4.6509522.11171K562SF3B4
chr1983669983728+CDS3.435216.50679HepG2NOL12
chr1979237979301+CDS3.7591410.74817HepG2SDAD1
chr1975992976059+CDS,intron-Proximal3.099383.90373HepG2AQR
chr1977335977417+CDS,intron-Proximal3.4924614.96718HepG2SDAD1
chr1976028976105+CDS,intron-Proximal3.777913.87714K562DDX52
chr1982706982763+CDS,intron-Proximal4.5317322.61140K562DDX24
chr1979006979050+CDS3.8355715.11363K562DDX24
chr1979525979572+CDS3.3485714.45342K562DDX24
chr1980870980907+CDS,intron-Proximal4.7744414.55824K562DDX24
chr1984586984647+CDS,intron-Proximal5.0180514.62919HepG2AQR
chr1985155985176+CDS,intron-Proximal4.694997.15341HepG2RPS3
chr1984230984284+CDS,intron-Proximal3.478877.67315K562BUD13
chr1982273982346+CDS,intron-Proximal3.222968.14120HepG2GRWD1
chr1982621982723+CDS,intron-Proximal5.1254251.63975K562SF3B4
chr1979223979256+CDS3.1380310.56162HepG2PPIG
chr1984988985094+CDS3.5862521.50919HepG2SDAD1
chr1988856988936+CDS,intron-Distal,intron-Proximal5.0053929.70642HepG2RBFOX2
chr1983159983181+CDS3.899068.55049K562DDX24
chr1978933978982+CDS3.5659316.54884HepG2PPIG
chr1990202990225+CDS,intron-Proximal4.005245.05384HepG2NOL12
chr1990203990238+CDS,intron-Proximal3.819615.44144HepG2RPS3
chr1985350985394+CDS5.228559.94634HepG2RPS3
chr1957605957637+CDS3.178788.49967HepG2RPS3
chr1980900980922+CDS,intron-Proximal3.4447511.72202K562AQR
chr1983156983205+CDS3.402288.70244HepG2SDAD1
chr1982661982775+CDS,intron-Proximal3.3540918.02102K562BUD13
chr1985006985073+CDS3.212317.25107HepG2RPS3
chr1984289984317+CDS4.7324018.93420K562AQR
chr1981214981254+CDS4.5894724.92993K562DDX24
chr1982604982717+CDS,intron-Distal,intron-Proximal3.3790120.21464HepG2EFTUD2
chr1982335982348+CDS,intron-Proximal5.9155534.61864K562AQR
chr1986206986259+CDS,intron-Proximal3.1826310.90257HepG2PRPF8
chr1979747979816+CDS3.1392011.28704HepG2PPIG
chr1976009976047+CDS,intron-Proximal4.965975.90023K562SF3B4
chr1981490981566+CDS,intron-Proximal4.8294120.50286K562SF3B4
chr1983413983430+CDS4.885646.93329K562DDX24
chr1977538977573+CDS,intron-Proximal4.182493.93614HepG2AQR
chr1986790986854+CDS,intron-Proximal3.7692415.75306HepG2EFTUD2
chr1985815985854+CDS3.576615.35770HepG2NOL12
chr1979543979637+CDS3.2597525.14773HepG2PPIG
chr1979599979633+CDS4.067217.70980K562BUD13
chr1979713979725+CDS,intron-Proximal3.296646.68658HepG2RPS3
chr1985001985054+CDS3.234845.97094K562METAP2
chr1982311982425+CDS,intron-Proximal3.6317437.02494HepG2PRPF8
chr1984559984647+CDS,intron-Proximal4.4110814.10841K562AQR
chr1985132985168+CDS4.9819614.27743K562DDX24
chr1984982985065+CDS3.081103.26004K562PUM1
chr1984993985070+CDS3.085594.64607K562ABCF1
chr1981209981246+CDS3.4044610.26986HepG2RPS3
chr1983391983449+CDS,intron-Proximal3.076013.85371K562SND1
chr1977073977081+CDS3.352456.92518HepG2PPIG
chr1977333977490+CDS,intron-Proximal5.373998.02646K562FMR1
chr1985556985615+CDS,intron-Proximal4.3000112.83091HepG2SF3A3
chr1981529981557+CDS,intron-Proximal3.803686.98138HepG2PRPF8
chr1980543980564+CDS4.7189311.02544K562DDX24
chr1981637981646+CDS,intron-Proximal3.119575.56979K562YBX3
chr1979205979213+CDS3.171105.08732HepG2PPIG
chr1979592979637+CDS4.2744425.51279K562DDX24
chr1983221983246+CDS4.478938.98325HepG2PPIG
chr1955597955633+CDS5.1432672.03795HepG2DDX3X
chr1955614955686+CDS3.117418.75311HepG2NIP7
chr1989771989840+CDS,intron-Proximal3.433058.33266K562SF3B4
chr1979713979741+CDS,intron-Proximal4.4361720.30391K562DDX24
chr1979756979813+CDS7.0524722.40034K562DDX24
chr1980522980576+CDS,intron-Proximal3.857386.32052K562AQR
chr1984669984713+CDS4.297077.86100HepG2RPS3
chr1989355989387+CDS,intron-Proximal5.4206916.98953K562AQR
chr1976508976577+CDS,intron-Proximal3.5468917.72550HepG2PRPF8
chr1990206990232+CDS3.093037.82108HepG2BUD13
chr1987190987250+CDS,intron-Proximal3.7845214.10710HepG2PRPF8
chr1955599955637+CDS3.676903.93949K562GEMIN5
chr1982975983043+CDS3.230326.73433HepG2GRWD1
chr1957796957837+CDS3.223459.88362HepG2PPIG
chr1981209981248+CDS3.561458.92089K562BUD13
chr1978616978623+CDS,intron-Proximal3.0621810.89654K562YBX3
chr1982669982714+CDS,intron-Proximal6.7837949.71920HepG2SF3A3
chr1982646982744+CDS,intron-Proximal4.2433620.22484K562AQR
chr1978909978973+CDS,intron-Proximal3.2761914.58904HepG2BUD13
chr1982224982288+CDS3.079675.14064K562METAP2
chr1985897985941+CDS3.299818.98347HepG2PPIG
chr1986981987022+CDS3.3132110.79740HepG2PPIG
chr1986565986637+CDS,intron-Proximal4.789235.03032HepG2SF3B4
chr1955633955749+CDS4.85308400.00000HepG2DDX3X
chr1989356989393+CDS,intron-Proximal4.425213.93614HepG2AQR
chr1981504981574+CDS,intron-Proximal4.3819527.80978K562DDX24
chr1957739957764+CDS3.074565.02495HepG2SND1
chr1984806984830+CDS3.018687.83989HepG2PPIG
chr1979293979352+CDS3.5878815.85106HepG2PPIG
chr1981286981358+CDS,intron-Proximal3.411359.26797K562BUD13
chr1978742978834+CDS4.0361220.28972HepG2PPIG
chr1970632970684+CDS,intron-Proximal3.458763.09957HepG2AQR
chr1980865980904+CDS,intron-Proximal3.9243114.69131HepG2PPIG
chr1983055983060+CDS5.535207.95724HepG2PPIG
chr1978911978933+CDS,intron-Proximal4.0561412.12223HepG2PPIG
chr1982726982781+CDS3.6894113.56556HepG2PPIG
chr1982197982237+CDS,intron-Proximal4.036899.43678K562BUD13
chr1984615984668+CDS,intron-Proximal3.352563.42028HepG2SND1
chr1987005987112+CDS,intron-Proximal3.8181219.53626K562EFTUD2
chr1984219984289+CDS,intron-Proximal6.3414161.90177K562AQR
chr1980617980653+CDS4.478028.33963HepG2SDAD1
chr1980556980606+CDS3.782114.19414K562FXR2
chr1981488981582+CDS,intron-Proximal4.2547428.55577K562EFTUD2
chr1989158989209+CDS3.276815.00580K562METAP2
chr1978828978889+CDS,intron-Proximal3.5048211.41099HepG2PRPF8
chr1982094982111+CDS3.399726.12893K562BUD13
chr1981946982009+CDS3.159833.01245K562SRSF1
chr1981508981583+CDS,intron-Proximal3.3984115.07454K562BUD13
chr1986800986850+CDS,intron-Proximal3.079726.93304K562BUD13
chr1985550985614+CDS,intron-Proximal3.180216.73855HepG2SF3B4
chr1982723982802+CDS3.598037.50303K562UCHL5
chr1981205981257+CDS,intron-Proximal4.0586021.69919HepG2PPIG
chr1982620982708+CDS,intron-Proximal5.49393400.00000HepG2QKI
chr1987060987135+CDS,intron-Proximal4.9683523.15775K562SF3B4
chr1976515976562+CDS,intron-Proximal4.945216.19429HepG2CSTF2T
chr1982271982396+CDS,intron-Proximal3.3065130.33131HepG2PPIG
chr1981731981789+CDS,intron-Proximal3.7032727.59051K562SF3B4
chr1988771988843+CDS,intron-Distal,intron-Proximal6.5135050.90930HepG2RBFOX2
chr1980812980869+CDS4.131737.46244HepG2NOL12
chr1982712982774+CDS3.151256.10434HepG2SRSF1
chr1987390987431+CDS,intron-Distal,intron-Proximal5.2290629.75336K562EIF4G2
chr1989133989142+CDS3.159226.23779HepG2PPIG
chr1981496981542+CDS,intron-Proximal4.1402018.09866HepG2SF3A3
chr1989184989195+CDS3.507606.87242K562DDX24
chr1978623978648+CDS3.2661212.84406K562YBX3
chr1982980983042+CDS3.9300410.37782HepG2PPIG
chr1985346985391+CDS3.744004.90834HepG2SND1
chr1982187982231+CDS,intron-Proximal3.1462513.69616HepG2EFTUD2
chr1981536981568+CDS,intron-Proximal3.5410911.58875HepG2PPIG
chr1989155989208+CDS3.376915.89423K562SND1
chr1980901980944+CDS,intron-Proximal5.2410814.98569HepG2AQR
chr1981112981128+CDS,intron-Proximal3.006878.86614HepG2PPIG
chr1979583979640+CDS,intron-Proximal3.204094.28667HepG2WDR43
chr1978855978954+CDS,intron-Proximal5.4205710.32702HepG2AQR
chr1981527981562+CDS,intron-Proximal3.4490014.12454HepG2BUD13
chr1978925978986+CDS3.489533.70975K562UCHL5
chr1980738980747+CDS,intron-Proximal3.892473.84718K562METAP2
chr1981460981524+CDS,intron-Proximal3.3036811.49171HepG2PRPF8
chr1980620980657+CDS3.303044.46592HepG2NOL12
chr1978884978938+CDS,intron-Proximal4.4584010.30373HepG2EFTUD2
chr1987155987193+CDS3.005326.38636K562BUD13
chr1979713979752+CDS,intron-Proximal3.753437.55112HepG2NOL12
chr1955724955739+CDS3.142807.92183HepG2BUD13
chr1979713979747+CDS,intron-Proximal3.8132115.89452HepG2PPIG
chr1982158982231+CDS,intron-Proximal3.3465011.11682K562EFTUD2
chr1982706982787+CDS,intron-Proximal4.550755.24460HepG2UCHL5
chr1972948973003+intron-Distal3.589535.26543HepG2RBFOX2
chr1975612975651+intron-Distal4.139713.99137K562NONO
chr1971644971681+intron-Distal4.728385.24810K562GTF2F1
chr1974961975000+intron-Distal3.560244.77128HepG2RBFOX2
chr1967921967985+intron-Distal4.591384.62429HepG2NKRF
chr1972975973053+intron-Distal3.425875.06214K562FUS
chr1972305972401+intron-Distal3.5871022.85350HepG2CSTF2T
chr1959083959136+intron-Distal4.507635.27179K562EWSR1
chr1965907965942+intron-Distal3.958363.46495K562TARDBP
chr1983817983846+intron-Distal,intron-Proximal3.281016.20918K562BUD13
chr1988257988361+intron-Distal3.708808.54522K562RBFOX2
chr1958045958084+intron-Distal3.205594.51156HepG2CSTF2T
chr1974626974694+intron-Distal4.123893.84268HepG2GRSF1
chr1975429975471+intron-Distal3.159706.25526K562EWSR1
chr1972707972760+intron-Distal3.912786.92611K562EWSR1
chr1958260958320+intron-Distal4.429119.06344HepG2CSTF2T
chr1959937960016+intron-Distal3.020417.69512HepG2CSTF2T
chr1987954987994+intron-Distal4.762247.01932K562IGF2BP1
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chr1959024959057+intron-Distal5.134128.32666HepG2CSTF2T
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chr1968564968584+intron-Distal3.649878.27616HepG2CSTF2T
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chr1988567988619+intron-Distal6.1161962.17251K562EIF4G2
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chr1972942973010+intron-Distal3.8130525.75330HepG2CSTF2T
chr1979897979981+intron-Distal,intron-Proximal4.772387.44287K562TARDBP
chr1974232974356+intron-Distal3.487306.05047K562RBFOX2
chr1972989973031+intron-Distal3.491293.99385K562CSTF2T
chr1971706971807+intron-Distal3.645746.91629K562FUS
chr1971278971359+intron-Distal4.0548912.30051HepG2PRPF4
chr1980193980223+intron-Distal3.893063.84564K562EFTUD2
chr1988405988481+intron-Distal4.188485.92362K562IGF2BP1
chr1978310978345+intron-Distal3.607706.12954HepG2PRPF8
chr1962771962840+intron-Distal4.700274.75718K562EWSR1
chr1988936989026+intron-Distal,intron-Proximal6.1655640.64688HepG2RBFOX2
chr1972522972582+intron-Distal5.094419.05671K562NONO
chr1987570987613+intron-Distal4.0163411.01307HepG2RBFOX2
chr1974619974731+intron-Distal4.628987.76684K562FAM120A
chr1958545958585+intron-Distal3.193453.57490HepG2NKRF
chr1974708974773+intron-Distal3.417544.71003HepG2DROSHA
chr1972051972102+intron-Distal4.1838917.32654HepG2CSTF2T
chr1963176963203+intron-Distal4.929116.44863HepG2CSTF2T
chr1966864966921+intron-Distal4.7332110.02297K562EIF4G2
chr1958950959017+intron-Distal4.199874.88931HepG2FAM120A
chr1978302978352+intron-Distal4.436784.96496K562NONO
chr1987892988040+intron-Distal4.538624.88819K562EIF3G
chr1987994988016+intron-Distal3.765995.55419K562IGF2BP1
chr1980306980372+intron-Distal3.490267.68044K562TARDBP
chr1987713987749+intron-Distal6.0353637.70177K562TARDBP
chr1987791987852+intron-Distal5.6976915.45088K562AATF
chr1971343971427+intron-Distal3.160556.13582K562FUS
chr1974648974708+intron-Distal4.639345.41565HepG2DROSHA
chr1970807970822+intron-Distal3.893093.59342K562CSTF2T
chr1966441966534+intron-Distal5.256458.89307HepG2DKC1
chr1988094988149+intron-Distal3.285615.40929HepG2IGF2BP1
chr1966523966565+intron-Distal4.628635.71021K562TARDBP
chr1987776987833+intron-Distal5.7738945.61841K562TARDBP
chr1961778961831+intron-Distal5.066317.65828HepG2CSTF2T
chr1988649988670+intron-Distal3.421656.28049HepG2DROSHA
chr1988088988159+intron-Distal3.281894.31701K562FUS
chr1962135962185+intron-Distal4.472849.81366HepG2CSTF2T
chr1972518972589+intron-Distal3.125063.40381HepG2DROSHA
chr1971092971153+intron-Distal4.012879.88663HepG2FAM120A
chr1965178965223+intron-Distal3.674615.37900K562TARDBP
chr1971370971458+intron-Distal5.194067.35452K562NONO
chr1987775987824+intron-Distal4.482584.74172HepG2TIAL1
chr1988591988673+intron-Distal4.3493711.80693K562RBFOX2
chr1972311972389+intron-Distal4.9177214.14770HepG2FAM120A
chr1987751987777+intron-Distal5.4743327.42420K562EIF4G2
chr1987888987936+intron-Distal4.572634.03918HepG2SRSF7
chr1970783970898+intron-Distal,intron-Proximal3.7571012.65508HepG2EFTUD2
chr1989457989510+intron-Distal3.635045.32481K562AATF
chr1975827975913+intron-Distal5.3390341.07686HepG2CSTF2T
chr1958972959055+intron-Distal3.529604.91684K562CSTF2T
chr1988017988077+intron-Distal6.9940177.83330K562TARDBP
chr1975198975291+intron-Distal3.7610010.33127HepG2FAM120A
chr1980169980260+intron-Distal5.011408.89278K562TARDBP
chr1977640977672+intron-Distal,intron-Proximal4.314118.11292HepG2EFTUD2
chr1959389959455+intron-Distal4.729726.12846K562EWSR1
chr1988214988356+intron-Distal4.797486.85279K562FUS
chr1971635971694+intron-Distal4.1167214.59839HepG2CSTF2T
chr1959828959883+intron-Distal3.760609.47308HepG2CSTF2T
chr1956096956195+intron-Distal5.021408.14666K562EWSR1
chr1983800983897+intron-Distal,intron-Proximal3.5802610.15139K562EFTUD2
chr1988562988620+intron-Distal4.4353912.56292HepG2DDX6
chr1974044974117+intron-Distal6.2852419.91594K562EWSR1
chr1971291971448+intron-Distal5.4922011.17300K562CSTF2T
chr1988424988472+intron-Distal3.145296.96513K562EFTUD2
chr1975838975894+intron-Distal5.3232810.28087HepG2RBFOX2
chr1971506971568+intron-Distal4.566515.52969K562SMNDC1
chr1988621988649+intron-Distal3.810569.49665HepG2DROSHA
chr1982604982669+intron-Distal,intron-Proximal5.6031429.17509HepG2SF3A3
chr1975709975767+intron-Distal3.942369.82903HepG2PRPF4
chr1979868979924+intron-Distal,intron-Proximal5.461814.83371K562EFTUD2
chr1972961973036+intron-Distal3.8207610.60669HepG2FAM120A
chr1971116971207+intron-Distal3.153343.56105HepG2GRSF1
chr1982361982459+intron-Distal,intron-Proximal3.8113428.06398K562DDX24
chr1982378982492+intron-Distal,intron-Proximal3.4060514.89739K562EFTUD2
chr1987577987606+intron-Distal5.5149223.69562K562EIF4G2
chr1988022988069+intron-Distal7.8715999.43844K562EIF4G2
chr1972427972468+intron-Distal6.0254917.45635HepG2CSTF2T
chr1982534982620+intron-Distal,intron-Proximal6.0233186.66555HepG2QKI
chr1988098988154+intron-Distal3.441354.46877HepG2TIAL1
chr1988531988639+intron-Distal4.159737.99219HepG2TIAL1
chr1975398975463+intron-Distal3.8915213.56744HepG2PRPF4
chr1968362968428+intron-Distal4.481517.70374HepG2FAM120A
chr1972988973035+intron-Distal5.2976011.60422HepG2PRPF4
chr1971157971208+intron-Distal3.227445.49049HepG2FAM120A
chr1988005988060+intron-Distal6.7754135.94145K562AATF
chr1958355958389+intron-Distal4.024933.42782HepG2NKRF
chr1959426959502+intron-Distal4.406323.54095K562FAM120A
chr1973010973041+intron-Distal4.2139416.87322HepG2CSTF2T
chr1983793983871+intron-Distal,intron-Proximal6.1880138.80965K562AQR
chr1967478967523+intron-Distal5.233216.58769K562EIF4G2
chr1967903967973+intron-Distal4.946207.85700K562EWSR1
chr1974679974740+intron-Distal4.2112310.21741HepG2FAM120A
chr1988014988049+intron-Distal3.633445.29296K562DROSHA
chr1971801971852+intron-Distal3.381953.23984HepG2HNRNPUL1
chr1968407968488+intron-Distal4.116193.49885K562SMNDC1
chr1988247988300+intron-Distal4.841586.93935HepG2IGF2BP1
chr1977668977750+intron-Distal5.115115.90351K562AKAP8L
chr1958347958414+intron-Distal3.7364710.65357HepG2CSTF2T
chr1988303988332+intron-Distal4.8340328.96126K562EIF4G2
chr1987956987987+intron-Distal4.2977710.17675HepG2IGF2BP1
chr1974613974723+intron-Distal4.3400812.00451K562RBFOX2
chr1988406988438+intron-Distal3.078543.52704HepG2IGF2BP1
chr1965442965477+intron-Distal4.381236.72905K562EIF4G2
chr1974064974113+intron-Distal3.232103.34333HepG2DGCR8
chr1987933988061+intron-Distal3.042936.02682HepG2KHSRP
chr1974674974741+intron-Distal4.7843327.30895HepG2CSTF2T
chr1971322971377+intron-Distal4.0707419.56371HepG2CSTF2T
chr1988586988635+intron-Distal6.1146219.65716K562TARDBP
chr1988061988076+intron-Distal6.5159412.24808HepG2DKC1
chr1988415988457+intron-Distal4.240238.99679K562BUD13
chr1974286974333+intron-Distal4.880634.95161K562GTF2F1
chr1974284974340+intron-Distal4.7514811.02685HepG2RBFOX2
chr1988183988203+intron-Distal7.6093241.84999K562EIF4G2
chr1971985972052+intron-Distal4.0273811.05809HepG2FAM120A
chr1972996973041+intron-Distal4.608949.32002K562EWSR1
chr1971729971846+intron-Distal4.7931118.35405K562EWSR1
chr1974079974126+intron-Distal3.924545.79294K562GTF2F1
chr1971904971984+intron-Distal3.209694.31701K562FUS
chr1959351959468+intron-Distal4.764067.13447HepG2FAM120A
chr1988239988265+intron-Distal6.6464666.58775K562EIF4G2
chr1988620988676+intron-Distal3.8564711.58576HepG2DDX6
chr1978274978358+intron-Distal4.3781617.91927HepG2RBFOX2
chr1959402959488+intron-Distal3.461478.80318HepG2NKRF
chr1974221974284+intron-Distal4.141998.06625HepG2RBFOX2
chr1971354971433+intron-Distal3.956094.23488K562FAM120A
chr1974621974674+intron-Distal4.763386.68679HepG2GTF2F1
chr1977640977692+intron-Distal,intron-Proximal3.824139.80768HepG2PRPF4
chr1987893987926+intron-Distal7.5493439.23079K562EIF4G2
chr1977630977685+intron-Distal,intron-Proximal5.272935.19464K562DROSHA
chr1988649988676+intron-Distal5.0628628.96357K562EIF4G2
chr1964824964962+intron-Distal6.5871219.92343K562EIF4G2
chr1987987988052+intron-Distal4.3671015.95793HepG2IGF2BP1
chr1962617962685+intron-Distal4.252164.33692K562NONO
chr1971990972048+intron-Distal4.404405.51064K562DDX52
chr1988684988738+intron-Distal3.566448.15232K562RBFOX2
chr1987653987713+intron-Distal7.1169639.26836K562TARDBP
chr1987782987838+intron-Distal4.254524.70168K562CSTF2T
chr1975706975755+intron-Distal3.118146.13210HepG2RBFOX2
chr1966106966157+intron-Distal3.798185.91510K562TARDBP
chr1970790970945+intron-Distal,intron-Proximal4.8181234.05624HepG2CSTF2T
chr1988238988304+intron-Distal4.8432928.89695K562TARDBP
chr1988413988513+intron-Distal5.0807319.69517HepG2RBFOX2
chr1977687977698+intron-Distal3.100333.94177HepG2FASTKD2
chr1958963959024+intron-Distal4.7419012.31091HepG2CSTF2T
chr1988321988368+intron-Distal5.9106635.52815K562TARDBP
chr1988375988477+intron-Distal5.6771512.29015HepG2TIAL1
chr1978293978399+intron-Distal4.5154729.42745HepG2XPO5
chr1972510972576+intron-Distal4.2868013.80108HepG2FAM120A
chr1974064974127+intron-Distal6.0331614.11761HepG2FAM120A
chr1973900973948+intron-Distal4.2021315.98022HepG2CSTF2T
chr1974227974283+intron-Distal3.681105.55220K562CSTF2T
chr1979895979930+intron-Distal,intron-Proximal5.099285.62492K562EIF4G2
chr1974619974718+intron-Distal4.342969.58152K562CSTF2T
chr1958286958395+intron-Distal4.416208.87600K562EWSR1
chr1988413988487+intron-Distal4.8030114.11619K562DROSHA
chr1977673977755+intron-Distal3.265435.25094K562PRPF8
chr1973463973538+intron-Distal6.0840437.08535HepG2CSTF2T
chr1988013988061+intron-Distal6.7767658.61667HepG2DKC1
chr1982442982500+intron-Distal3.7159221.76853HepG2EFTUD2
chr1962799962825+intron-Distal3.031354.74807HepG2CSTF2T
chr1974604974708+intron-Distal3.612449.43449K562FUS
chr1971723971809+intron-Distal5.036828.86792K562CSTF2T
chr1975393975458+intron-Distal5.4295336.34715HepG2CSTF2T
chr1973471973551+intron-Distal3.868393.77385HepG2NCBP2
chr1988670988764+intron-Distal,intron-Proximal3.9386516.52921HepG2DROSHA
chr1988108988144+intron-Distal7.3507672.18755K562EIF4G2
chr1988092988170+intron-Distal3.175763.27689K562SRSF7
chr1988941989025+intron-Distal,intron-Proximal3.368236.67440HepG2PCBP2
chr1973103973137+intron-Distal4.4187413.16646HepG2CSTF2T
chr1987934987956+intron-Distal7.8035549.10892K562EIF4G2
chr1987987988022+intron-Distal7.42610114.38328K562EIF4G2
chr1973648973707+intron-Distal3.690788.40530HepG2FAM120A
chr1974292974341+intron-Distal4.834514.74377HepG2FASTKD2
chr1987875987937+intron-Distal5.410125.33201K562IGF2BP1
chr1987954988061+intron-Distal4.7772914.65753HepG2TIAL1
chr1971648971685+intron-Distal4.608449.13646HepG2FAM120A
chr1974294974334+intron-Distal4.386895.42636K562NONO
chr1971003971044+intron-Distal3.226778.14126HepG2CSTF2T
chr1987655987715+intron-Distal3.400784.96096HepG2STAU2
chr1967915967983+intron-Distal4.180893.79474HepG2FAM120A
chr1988420988494+intron-Distal3.253675.40194HepG2FAM120A
chr1972508972552+intron-Distal3.444663.68010HepG2GTF2F1
chr1965109965162+intron-Distal5.7149510.64584K562EIF4G2
chr1972187972206+intron-Distal3.520368.52590HepG2CSTF2T
chr1971426971457+intron-Distal4.9937514.05197HepG2CSTF2T
chr1957910957939+intron-Proximal3.115175.21772HepG2CSTF2T
chr1985559985578+intron-Proximal4.323284.77477HepG2RBFOX2
chr1980922980946+intron-Proximal6.4334315.35700K562AQR
chr1976520976546+intron-Proximal3.292584.01088HepG2RBFOX2
chr1986582986630+intron-Proximal4.8413610.89051K562SF3B4
chr1982383982419+intron-Proximal4.1211218.45031K562AQR
chr1987221987285+intron-Proximal3.7000913.41312K562BUD13
chr1987209987271+intron-Proximal3.436243.32027K562SMNDC1
chr1982341982404+intron-Proximal3.4552316.60762HepG2BUD13
chr1982642982705+intron-Proximal4.152286.24305HepG2AQR
chr1970707970749+intron-Proximal4.549858.69247K562AQR
chr1978546978607+intron-Proximal4.042936.47970HepG2SF3B4
chr1978559978592+intron-Proximal4.355817.94777HepG2RBFOX2
chr1975992976041+intron-Proximal3.407469.90053HepG2CSTF2T
chr1984543984586+intron-Proximal5.6469511.04988HepG2AQR
chr1985527985559+intron-Proximal4.247845.02240HepG2PRPF4
chr1979154979201+intron-Proximal4.629775.28859HepG2SF3B4
chr1987231987258+intron-Proximal3.912395.34520K562EFTUD2
chr1985522985581+intron-Proximal3.296667.76460HepG2EFTUD2
chr1987045987098+intron-Proximal6.2644611.83658HepG2EFTUD2
chr1982164982197+intron-Proximal4.607258.69408K562SF3B4
chr1977545977588+intron-Proximal3.164377.92471HepG2PRPF8
chr1980969981003+intron-Proximal4.856637.37772HepG2EFTUD2
chr1982146982177+intron-Proximal4.478485.28859HepG2SF3B4
chr1976021976042+intron-Proximal4.181375.47926K562AQR
chr1982617982667+intron-Proximal3.628153.00221HepG2U2AF1
chr1987029987077+intron-Proximal3.680269.25254HepG2PRPF8
chr1982365982422+intron-Proximal4.4914621.41259HepG2EFTUD2
chr1970740970790+intron-Proximal5.9683117.68492HepG2CSTF2T
chr1985733985771+intron-Proximal5.787888.14804HepG2EFTUD2
chr1955793955843+intron-Proximal4.217134.43799HepG2CSTF2T
chr1982613982649+intron-Proximal4.613599.39688HepG2SF3B4
chr1982362982400+intron-Proximal3.001264.84510HepG2GRWD1
chr1984548984608+intron-Proximal4.235917.41879HepG2FAM120A
chr1981295981338+intron-Proximal5.0419515.14250HepG2EFTUD2
chr1957531957578+intron-Proximal5.215595.58150K562SF3B4
chr1984551984603+intron-Proximal4.8925112.91190HepG2PRPF8
chr1970740970783+intron-Proximal3.552697.03098HepG2EFTUD2
chr1984218984236+intron-Proximal5.213277.09786HepG2AQR
chr1981732981774+intron-Proximal4.362139.18646HepG2SF3A3
chr1985545985595+intron-Proximal3.641267.54792HepG2PRPF8
chr1982348982383+intron-Proximal5.1382048.26610K562AQR
chr1982138982175+intron-Proximal3.133356.82513HepG2PRPF8
chr1977542977588+intron-Proximal5.210816.22530K562AQR
chr1983746983828+intron-Proximal3.807827.84250HepG2AQR
chr1982649982659+intron-Proximal4.8543311.40390HepG2SF3B4
chr1981302981342+intron-Proximal3.884477.33504K562SF3B4
chr1985752985806+intron-Proximal5.0218411.33298K562SF3B4
chr1989933989991+intron-Proximal5.1807913.75908K562AQR
chr1980664980729+intron-Proximal4.097564.07325HepG2SF3B4
chr1985546985602+intron-Proximal4.052998.34684K562SF3B4
chr1987202987289+intron-Proximal3.215296.49635K562SF3B4
chr1979878979914+intron-Proximal4.811537.37772HepG2EFTUD2
chr1990154990203+intron-Proximal4.162135.16342K562SF3B4
chr1982659982700+intron-Proximal4.6237413.30158HepG2SF3B4
chr1989387989401+intron-Proximal6.3757616.54010K562AQR
chr1981287981344+intron-Proximal5.5508114.28499K562EFTUD2
chr1978544978598+intron-Proximal4.1934811.64735HepG2EFTUD2
chr1977542977578+intron-Proximal3.452775.08364HepG2PRPF4
chr1987218987270+intron-Proximal3.9860714.32780K562AQR
chr1983746983793+intron-Proximal7.0548628.03700K562AQR
chr1987067987095+intron-Proximal4.812706.08900K562BUD13
chr1985736985759+intron-Proximal5.157478.38577HepG2PRPF8
chr1985496985537+intron-Proximal4.587755.58015HepG2AQR
chr1987221987278+intron-Proximal4.2731516.59095HepG2RBM22
chr1985725985800+intron-Proximal4.887956.80569HepG2SF3B4
chr1987209987278+intron-Proximal3.6064218.94432HepG2EFTUD2
chr1977551977595+intron-Proximal4.764915.95343K562EWSR1
chr1982607982680+intron-Proximal3.262144.94539HepG2RBM5
chr1989067989090+intron-Proximal3.724598.32734HepG2RBFOX2
chr1982146982187+intron-Proximal4.9028811.59041HepG2EFTUD2
chr1983751983793+intron-Proximal3.734277.83009HepG2PRPF8
chr1957525957569+intron-Proximal3.989503.50006HepG2SF3B4
chr1981286981338+intron-Proximal3.034764.49807K562RBFOX2
chr1985481985598+intron-Proximal3.439618.22619K562EFTUD2
chr1976784976791+intron-Proximal4.257904.75655HepG2PRPF8
chr1987239987292+intron-Proximal4.3982820.71983K562EIF4G2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AGRN is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AGRN is not available on ENCORE database.

  • 116 RBPs can affect the levels of AGRN.  








The Knockdown/knockout RNA-Seq assay for AGRN is not available on ENCORE database.





116 RBPs can affect the gene expression of AGRN :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AGRNENSG00000188157.92747.044801596.634000.782702.520201.56770HepG2ADAR
AGRNENSG00000188157.912061.785008231.687600.5511018.7517017.00740HepG2AKAP8L
AGRNENSG00000188157.910693.839606774.828900.658402.710102.03080HepG2AUH
AGRNENSG00000188157.94969.802202867.928400.793104.636203.88520HepG2BOP1
AGRNENSG00000188157.95540.418308191.28260-0.5641024.9956023.45120HepG2CKAP4
AGRNENSG00000188157.94542.882502632.725100.787005.374404.44590HepG2CPSF6
AGRNENSG00000188157.99174.680605644.340800.700802.610101.53680HepG2CPSF7
AGRNENSG00000188157.92558.739101637.342500.6440014.5130012.32960HepG2YBX3
AGRNENSG00000188157.9750.324202822.76200-1.911502.818701.44530HepG2CSTF2T
AGRNENSG00000188157.95195.386002446.377601.086508.549707.53850HepG2CELF1
AGRNENSG00000188157.94882.545307577.76160-0.6341027.8367025.89040HepG2DDX19B
AGRNENSG00000188157.94330.862002075.704201.061003.182102.36100HepG2DDX55
AGRNENSG00000188157.916394.926604318.243901.924607.548806.57380HepG2DDX6
AGRNENSG00000188157.94279.727607839.06950-0.8732040.5260038.73710HepG2DKC1
AGRNENSG00000188157.93234.144501607.707801.008308.662307.47360HepG2DNAJC21
AGRNENSG00000188157.93994.580001593.569201.3257016.4280014.96600HepG2DNAJC2
AGRNENSG00000188157.911422.854004147.658301.461504.385003.64790HepG2EIF2S1
AGRNENSG00000188157.94584.903102485.933400.8830017.3783015.47900HepG2EIF4G2
AGRNENSG00000188157.912476.509107779.172000.6814013.5235012.35880HepG2ETF1
AGRNENSG00000188157.94518.434902447.741000.884304.316202.82990HepG2FAM120A
AGRNENSG00000188157.93685.423205859.54430-0.6690013.2671011.60330HepG2FUBP3
AGRNENSG00000188157.97983.236604290.580200.895703.710702.94380HepG2G3BP1
AGRNENSG00000188157.94517.543502788.413500.6960022.5027020.73310HepG2HNRNPF
AGRNENSG00000188157.98251.396604351.026600.923204.615103.73210HepG2HNRNPK
AGRNENSG00000188157.95371.223302396.087601.1645020.7350019.05570HepG2HNRNPL
AGRNENSG00000188157.94842.089102847.618700.765805.602104.73920HepG2HNRNPLL
AGRNENSG00000188157.92480.972201793.492000.468002.508501.93100HepG2HNRNPU
AGRNENSG00000188157.94311.720802745.766000.651005.819204.80880HepG2IGF2BP1
AGRNENSG00000188157.92899.955801831.989400.6625026.2373024.26580HepG2ILF2
AGRNENSG00000188157.94825.901802468.756500.966902.465901.35820HepG2KHDRBS1
AGRNENSG00000188157.99668.557307489.708200.3683012.6303010.64790HepG2KIF1C
AGRNENSG00000188157.92965.727901825.593900.699902.809501.66700HepG2LARP7
AGRNENSG00000188157.98794.192004654.898900.917703.925303.18540HepG2MATR3
AGRNENSG00000188157.92869.043001650.461500.797603.054701.56920HepG2NIP7
AGRNENSG00000188157.97004.329302608.311301.425008.319407.02000HepG2NOL12
AGRNENSG00000188157.93483.857001479.004501.236004.491202.67710HepG2NOLC1
AGRNENSG00000188157.94723.226901908.096101.307507.014305.25450HepG2NONO
AGRNENSG00000188157.96925.577702364.381801.550408.107806.53890HepG2PABPC1
AGRNENSG00000188157.910512.912007791.814200.432004.525802.33530HepG2PES1
AGRNENSG00000188157.94162.590701599.648201.3796019.7807017.95090HepG2PPIL4
AGRNENSG00000188157.94273.995702489.874400.7794016.3213015.03830HepG2PUF60
AGRNENSG00000188157.94810.659102643.126600.8639034.7220033.09860HepG2PUM1
AGRNENSG00000188157.94869.031402641.186600.882304.001103.19930HepG2PUM2
AGRNENSG00000188157.94934.483508345.82620-0.7582015.6316014.37770HepG2PUS1
AGRNENSG00000188157.93188.590106501.78940-1.0279013.1280012.16660HepG2RBM22
AGRNENSG00000188157.94504.582302201.556601.032807.027805.44020HepG2RBM27
AGRNENSG00000188157.93516.019901787.779100.975704.949603.52500HepG2RCC2
AGRNENSG00000188157.97457.957205312.065400.489407.235406.43190HepG2NELFE
AGRNENSG00000188157.94202.326102030.092701.049506.455705.26310HepG2RPS2
AGRNENSG00000188157.93584.474102072.635100.790203.591202.35900HepG2RPS5
AGRNENSG00000188157.92760.144701597.172600.789103.979203.23120HepG2SAFB2
AGRNENSG00000188157.95218.505402449.249601.091203.247001.83460HepG2SART3
AGRNENSG00000188157.97378.597102387.432301.62780120.01230117.11030HepG2SLBP
AGRNENSG00000188157.92895.152901862.554100.6363023.9313022.34180HepG2SMN1
AGRNENSG00000188157.95221.296102284.798801.192204.853803.55210HepG2SMNDC1
AGRNENSG00000188157.93189.677207343.25110-1.2030016.4070015.45460HepG2SRFBP1
AGRNENSG00000188157.91447.263705186.93430-1.8416035.9270034.64960HepG2SRSF1
AGRNENSG00000188157.97688.851602458.406301.64490138.62910135.28470HepG2SRSF5
AGRNENSG00000188157.93800.836002739.611400.472202.471901.81010HepG2SRSF7
AGRNENSG00000188157.93319.409406375.19020-0.9415011.2779010.37830HepG2SSB
AGRNENSG00000188157.96872.755002264.563801.6016011.634109.25070HepG2STIP1
AGRNENSG00000188157.95998.476902795.869801.1012022.9114021.40450HepG2SUCLG1
AGRNENSG00000188157.93882.341902065.693200.910202.056801.46060HepG2SUPV3L1
AGRNENSG00000188157.91593.858404662.95490-1.5487021.8138020.44770HepG2TAF15
AGRNENSG00000188157.95129.752602776.922500.885307.729206.59560HepG2TARDBP
AGRNENSG00000188157.94441.273901742.640401.349605.125204.48800HepG2TIAL1
AGRNENSG00000188157.97893.322601758.295902.16640150.27320147.01460HepG2TRIM56
AGRNENSG00000188157.96887.536902432.526401.501402.722201.85630HepG2TUFM
AGRNENSG00000188157.91786.472405922.02450-1.729006.122605.20480HepG2U2AF1
AGRNENSG00000188157.97600.613502574.807101.561608.827407.30010HepG2UBE2L3
AGRNENSG00000188157.910664.695906492.168700.7160018.1140016.63270HepG2UPF1
AGRNENSG00000188157.94462.460006267.88420-0.490103.313102.66840HepG2UTP3
AGRNENSG00000188157.96011.978302330.129801.367305.263003.74470HepG2XPO5
AGRNENSG00000188157.910181.889307140.097000.511906.722805.96690HepG2ZNF622
AGRNENSG00000188157.95662.402102475.942301.1933057.1779054.66330K562AGGF1
AGRNENSG00000188157.94711.116802720.849600.7919016.2920013.42530K562AKAP8
AGRNENSG00000188157.96091.194102576.370301.241308.166706.98450K562AKAP8L
AGRNENSG00000188157.91843.150703824.85910-1.0532021.9406020.46550K562AQR
AGRNENSG00000188157.93870.879002703.308600.5178011.207809.19980K562ATP5C1
AGRNENSG00000188157.92140.981901300.432400.719202.962701.59800K562BCCIP
AGRNENSG00000188157.92560.832201256.848601.0267014.1707011.97510K562BCLAF1
AGRNENSG00000188157.92880.250601854.519800.635002.582801.57260K562CCAR1
AGRNENSG00000188157.94352.276102958.756400.556708.990906.85620K562CCDC124
AGRNENSG00000188157.94308.238503318.852400.376302.320801.31590K562CPEB4
AGRNENSG00000188157.92607.95390953.507401.451504.870003.41050K562CSTF2
AGRNENSG00000188157.93742.550302904.961200.365403.509901.85240K562DDX19B
AGRNENSG00000188157.93380.591702594.335800.381802.261901.32570K562DDX3X
AGRNENSG00000188157.94024.626602630.266100.613504.107402.42250K562DDX6
AGRNENSG00000188157.9927.66060536.431200.7901012.3106010.60700K562EIF3G
AGRNENSG00000188157.93264.919202440.758300.419606.689504.76760K562EIF4B
AGRNENSG00000188157.92759.951302172.668500.345102.648101.41220K562EXOSC5
AGRNENSG00000188157.91105.056201453.08470-0.395003.386602.43650K562FMR1
AGRNENSG00000188157.91313.931502818.65240-1.1011042.0241039.82380K562FXR1
AGRNENSG00000188157.91213.02550869.282000.480603.035301.52130K562G3BP1
AGRNENSG00000188157.9166.62180524.65290-1.6548015.9039013.87730K562G3BP2
AGRNENSG00000188157.91943.865401363.315800.511706.073004.89770K562GPKOW
AGRNENSG00000188157.92233.329903103.14900-0.474502.601701.57990K562HNRNPL
AGRNENSG00000188157.9908.127901434.88750-0.660006.463304.95030K562HNRNPM
AGRNENSG00000188157.91592.880602364.89350-0.570106.836605.59400K562HSPD1
AGRNENSG00000188157.92895.04620909.797001.669903.912902.60640K562IGF2BP2
AGRNENSG00000188157.91506.38370925.135200.703306.681904.70690K562IGF2BP3
AGRNENSG00000188157.93918.218602734.032100.519103.757502.77620K562KIF1C
AGRNENSG00000188157.91623.96510955.538600.7650010.244908.56350K562MAGOH
AGRNENSG00000188157.93574.557802617.255700.449604.475103.01450K562MAK16
AGRNENSG00000188157.94196.377003062.826200.454203.168402.18380K562MBNL1
AGRNENSG00000188157.91639.858502706.56550-0.722904.871303.23550K562NCBP2
AGRNENSG00000188157.95212.379604181.740200.317706.316805.25170K562NSUN2
AGRNENSG00000188157.93192.514002132.214700.582202.846401.83800K562PABPN1
AGRNENSG00000188157.91504.65530850.079100.823709.142607.33660K562PCBP2
AGRNENSG00000188157.91465.268002119.64580-0.532702.654901.87260K562POLR2G
AGRNENSG00000188157.91888.05320928.412101.0240015.1251013.63800K562PTBP1
AGRNENSG00000188157.92878.638505213.62000-0.856903.144402.00450K562PUM1
AGRNENSG00000188157.94362.326902554.765500.7718013.0457011.91280K562PUS1
AGRNENSG00000188157.9277.99220500.49750-0.848303.220601.67030K562RAVER1
AGRNENSG00000188157.94782.189002489.471900.9417033.7404031.58230K562RBM15
AGRNENSG00000188157.93530.295604126.63430-0.225202.560001.77380K562SF3A3
AGRNENSG00000188157.9771.54000545.161700.501004.903703.74940K562SF3B4
AGRNENSG00000188157.9324.22410492.57460-0.603404.027802.00960K562SND1
AGRNENSG00000188157.92167.128901366.325500.665402.559801.58460K562SRFBP1
AGRNENSG00000188157.91772.475101122.058500.659509.750307.65180K562SRSF4
AGRNENSG00000188157.91846.87930859.810201.1029022.0308019.00550K562SRSF5
AGRNENSG00000188157.91257.512602126.25170-0.757705.683004.49810K562SYNCRIP
AGRNENSG00000188157.92482.50910921.054801.4303013.1425011.39250K562TARDBP
AGRNENSG00000188157.92229.88740888.500901.3274039.9069036.31410K562TIA1
AGRNENSG00000188157.91902.59450872.239901.125103.414902.17470K562TRA2A
AGRNENSG00000188157.92702.013201614.205300.743102.304001.45310K562TRIM56
AGRNENSG00000188157.9377.50030524.92540-0.475603.219202.35490K562U2AF2
AGRNENSG00000188157.95585.988204308.605100.374504.232003.12620K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AGRN is not available on ENCORE database.





6 RBPs can affect the splicing of AGRN :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAGRNENSG00000188157.9chr1+984945985175984615984831985282985417-0.121000.000260.00643excludedHepG2U2AF1
SEAGRNENSG00000188157.9chr1+981343981468981112981256981776982115-0.270000.003300.09501excludedK562FXR1
SEAGRNENSG00000188157.9chr1+9864119864749861059862179866329867490.208000.000000.00000includedHepG2PTBP1
SEAGRNENSG00000188157.9chr1+9864119864239861059862179866329867490.272000.001860.06439includedK562PTBP1
A3SSAGRNENSG00000188157.9chr1+9831389832189831559832189828549830670.051000.000010.00207longerHepG2RBM22
A3SSAGRNENSG00000188157.9chr1+9813199814689813439814689811129812560.129000.000000.00001longerHepG2RBM22
MXEAGRNENSG00000188157.9chr1+981343981468981539981645981112981256981776982115-0.066000.001040.008412includedHepG2U2AF2
MXEAGRNENSG00000188157.9chr1+981343981468981539981645981112981256981776982115-0.069000.001190.021292includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AGRN is not avaliable on ENCORE database.