PET112

General Information

Gene Name       : PET112
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PET112)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PET112 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PET112 RNA is bound by 4 proteins.  







eCLIP assay for PET112 is not avaliable on ENCORE database.





4 proteins are bound to PET112 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4152593911152593991-3'-UTR,CDS,intron-Distal,intron-Proximal3.215673.47314HepG2G3BP1
chr4152592110152592215-3'-UTR,intron-Distal,intron-Proximal3.623375.19325HepG2LARP4
chr4152629138152629254-3'-UTR,CDS,intron-Distal,intron-Proximal4.284424.69712HepG2G3BP1
chr4152637160152637275-5'-UTR,CDS,intron-Distal,intron-Proximal4.448834.42709HepG2G3BP1
chr4152682001152682102-CDS,intron-Distal,intron-Proximal3.668133.14999HepG2GRWD1
chr4152650420152650474-intron-Distal5.073036.40067K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PET112 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PET112 is not available on ENCORE database.

  • 82 RBPs can affect the levels of PET112.  








The Knockdown/knockout RNA-Seq assay for PET112 is not available on ENCORE database.





82 RBPs can affect the gene expression of PET112 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PET112ENSG00000059691.7545.01690765.36770-0.489905.992905.16650HepG2ACO1
PET112ENSG00000059691.7881.392301276.11830-0.533903.872403.25880HepG2AKAP1
PET112ENSG00000059691.7898.138901184.13320-0.398805.182404.29150HepG2AUH
PET112ENSG00000059691.7795.87040526.275300.596605.333704.53650HepG2BOP1
PET112ENSG00000059691.7515.89890712.92340-0.466703.921303.02640HepG2CALR
PET112ENSG00000059691.7645.92650765.20250-0.244501.982701.40800HepG2CKAP4
PET112ENSG00000059691.71010.72000398.345301.3432013.3427011.71680HepG2CNOT7
PET112ENSG00000059691.7585.32080739.89650-0.338102.329601.31720HepG2CPSF7
PET112ENSG00000059691.7483.90580679.62240-0.490003.779202.99880HepG2DDX21
PET112ENSG00000059691.7464.675801049.99090-1.1761014.7631013.48760HepG2DDX6
PET112ENSG00000059691.7509.90890651.38260-0.353302.724602.02470HepG2DNAJC21
PET112ENSG00000059691.7503.96500645.71120-0.357602.134101.54720HepG2DNAJC2
PET112ENSG00000059691.7561.213001009.53380-0.847109.090708.05420HepG2EIF2S1
PET112ENSG00000059691.7405.06460581.79710-0.522403.267102.29060HepG2EIF3D
PET112ENSG00000059691.7574.377401086.17650-0.919208.055406.91200HepG2EIF4B
PET112ENSG00000059691.7952.939101359.61140-0.512708.706807.74220HepG2ETF1
PET112ENSG00000059691.7568.58750807.04790-0.505302.766401.65130HepG2FUS
PET112ENSG00000059691.7871.838201125.49930-0.368402.413001.76500HepG2FXR1
PET112ENSG00000059691.7599.481801044.18270-0.800608.218707.10250HepG2G3BP1
PET112ENSG00000059691.7837.055601070.53670-0.354903.377502.35880HepG2HNRNPA2B1
PET112ENSG00000059691.7581.80190731.51180-0.330401.953201.35920HepG2HNRNPC
PET112ENSG00000059691.7790.516201057.05620-0.419203.141702.39850HepG2HNRNPK
PET112ENSG00000059691.7827.165801060.94530-0.359104.175603.36040HepG2HNRNPL
PET112ENSG00000059691.7557.19370726.67350-0.383103.705303.01370HepG2HNRNPU
PET112ENSG00000059691.7739.99880903.73410-0.288401.957901.34050HepG2IGF2BP1
PET112ENSG00000059691.7450.371701061.43060-1.2368018.6360017.06150HepG2IGF2BP2
PET112ENSG00000059691.7746.097901067.53990-0.516903.202502.11350HepG2KHSRP
PET112ENSG00000059691.7435.70290734.23380-0.752908.448407.10420HepG2MSI2
PET112ENSG00000059691.7757.994201158.92870-0.612505.278404.41650HepG2NCBP2
PET112ENSG00000059691.7723.632701032.23680-0.512403.904503.05770HepG2PABPC4
PET112ENSG00000059691.7749.758601067.56900-0.509807.301506.39200HepG2PCBP1
PET112ENSG00000059691.7401.81050572.64220-0.511103.024102.18270HepG2PRPF8
PET112ENSG00000059691.7735.940601086.30100-0.561808.470607.62200HepG2PTBP1
PET112ENSG00000059691.7851.832701102.58260-0.372202.805402.20540HepG2PUF60
PET112ENSG00000059691.7884.431501170.50240-0.404305.616404.83400HepG2PUM1
PET112ENSG00000059691.7658.84560779.57680-0.242801.916001.38410HepG2PUS1
PET112ENSG00000059691.7850.040801176.47030-0.468905.380504.55150HepG2QKI
PET112ENSG00000059691.7436.48090737.19980-0.756104.048603.20360HepG2RAVER1
PET112ENSG00000059691.7719.85220890.49790-0.306902.410501.60380HepG2RBM15
PET112ENSG00000059691.7628.652101067.73020-0.7642010.611109.35040HepG2RBM25
PET112ENSG00000059691.7823.809201208.94070-0.553408.479607.62690HepG2NELFE
PET112ENSG00000059691.7756.657901125.97860-0.573508.826507.81920HepG2RECQL
PET112ENSG00000059691.7784.00710988.57740-0.334502.131801.52250HepG2RPLP0
PET112ENSG00000059691.7492.27160724.24770-0.557002.968901.99220HepG2RPS10
PET112ENSG00000059691.7408.01410566.16710-0.472603.453902.77580HepG2RPS19
PET112ENSG00000059691.7553.56750791.49980-0.515804.276103.28830HepG2RPS2
PET112ENSG00000059691.7341.33260566.46320-0.730805.078704.04760HepG2RRP9
PET112ENSG00000059691.7828.79800647.119100.356903.738203.00910HepG2SAFB2
PET112ENSG00000059691.7679.12020929.86520-0.453402.462701.82680HepG2SF3A3
PET112ENSG00000059691.7828.476201130.96230-0.449005.768404.96740HepG2SF3B4
PET112ENSG00000059691.7358.28190751.93720-1.0695010.270108.34970HepG2SMNDC1
PET112ENSG00000059691.7639.88020960.39500-0.585809.224508.32090HepG2SRSF9
PET112ENSG00000059691.7958.112001114.30540-0.217902.007501.55280HepG2SSB
PET112ENSG00000059691.7435.12340688.94470-0.663003.622302.23440HepG2SUB1
PET112ENSG00000059691.71043.732601238.10430-0.246401.976801.43410HepG2SUCLG1
PET112ENSG00000059691.7797.775101061.08720-0.411504.430603.74680HepG2TAF15
PET112ENSG00000059691.7600.33660974.97380-0.699609.259407.74720HepG2TIA1
PET112ENSG00000059691.7508.68630776.11540-0.609505.236204.38750HepG2U2AF1
PET112ENSG00000059691.7385.79490768.98850-0.995102.934001.91450HepG2U2AF2
PET112ENSG00000059691.7614.646501140.34890-0.891609.249207.68020HepG2UBE2L3
PET112ENSG00000059691.7625.65680824.64840-0.398404.317403.47670HepG2UPF1
PET112ENSG00000059691.7612.72960796.16550-0.377803.575002.90940HepG2UTP3
PET112ENSG00000059691.7542.20150676.06450-0.318302.720602.05420HepG2ZC3H8
PET112ENSG00000059691.7648.10570906.95530-0.484807.109406.33790HepG2ZNF622
PET112ENSG00000059691.7421.09560878.85460-1.0615013.8340012.66520K562AQR
PET112ENSG00000059691.7274.38120373.95620-0.446702.079201.32870K562BOP1
PET112ENSG00000059691.7292.55460397.63780-0.442702.550701.79650K562CPSF6
PET112ENSG00000059691.7308.44610458.78010-0.572803.848402.75880K562EFTUD2
PET112ENSG00000059691.7503.89760725.10140-0.525105.648004.67480K562EIF2S2
PET112ENSG00000059691.7349.35370491.10900-0.491402.646701.63670K562EIF3D
PET112ENSG00000059691.7494.09040340.869100.535503.813302.85380K562EIF4A3
PET112ENSG00000059691.7245.81450404.55780-0.718804.825703.69430K562FMR1
PET112ENSG00000059691.7464.16400354.490400.388802.584301.99550K562FXR1
PET112ENSG00000059691.7205.40220307.05100-0.580002.609401.92630K562G3BP2
PET112ENSG00000059691.7431.60450578.55630-0.422703.320702.06960K562GLRX3
PET112ENSG00000059691.7260.20110379.65840-0.545103.162202.31510K562GPKOW
PET112ENSG00000059691.7295.40090526.04990-0.832507.935706.97230K562HNRNPC
PET112ENSG00000059691.7208.84750453.66890-1.119209.432507.12710K562IGF2BP2
PET112ENSG00000059691.7210.44740324.14920-0.623202.764601.83200K562KRR1
PET112ENSG00000059691.7372.32180509.56110-0.452702.945301.50570K562LARP7
PET112ENSG00000059691.7548.72140675.85080-0.300602.570401.84740K562NSUN2
PET112ENSG00000059691.71024.888701295.47890-0.338002.750001.68780K562PUM1
PET112ENSG00000059691.7535.52430666.89060-0.316502.469901.69650K562SF3A3
PET112ENSG00000059691.7222.42860361.02460-0.698803.936702.76530K562SF3B1
PET112ENSG00000059691.7302.22310408.00790-0.433002.207701.31250K562SRFBP1
PET112ENSG00000059691.7296.55390432.12180-0.543103.085702.01230K562SUPV3L1
PET112ENSG00000059691.7329.87970459.41580-0.477902.895002.17140K562TARDBP
PET112ENSG00000059691.7180.24840297.50680-0.722903.940202.58840K562U2AF1
PET112ENSG00000059691.7167.50120307.30080-0.875506.913805.65210K562U2AF2
PET112ENSG00000059691.71053.793001373.25760-0.382002.896401.45970K562UBE2L3
PET112ENSG00000059691.7311.71650457.41620-0.553303.543202.38070K562UCHL5
PET112ENSG00000059691.7812.879101041.16700-0.357102.861401.54550K562WRN
PET112ENSG00000059691.7638.97920990.11480-0.631807.140905.64160K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PET112 is not available on ENCORE database.





7 RBPs can affect the splicing of PET112 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPET112ENSG00000059691.7chr4-1526242331526244521526224801526226701526250021526250470.058000.000960.01988includedHepG2U2AF1
SEPET112ENSG00000059691.7chr4-152609781152609915152593913152594048152622480152622670-0.099000.006710.06695excludedHepG2U2AF2
SEPET112ENSG00000059691.7chr4-1526242331526244521526224801526226701526250021526250470.085000.000790.01004includedK562AQR
SEPET112ENSG00000059691.7chr4-152600964152601043152593913152594048152609781152609915-0.110000.003680.03613excludedK562AQR
SEPET112ENSG00000059691.7chr4-152593913152594048152592014152592454152600964152601043-0.144000.000040.00183excludedHepG2SRSF1
SEPET112ENSG00000059691.7chr4-1526242331526244521526224801526226701526250021526250470.090000.000080.05950includedK562LARP7
SEPET112ENSG00000059691.7chr4-1526242331526244521526224801526226701526250021526250470.059000.003250.09136includedK562HNRNPU
MXEPET112ENSG00000059691.7chr4-1525939131525940481526009641526010431525920141525924541526097811526099150.202000.001570.033131includedHepG2SRSF1
MXEPET112ENSG00000059691.7chr4-1526291391526292531526371601526372831526263361526264211526380271526382260.066000.009270.074841includedHepG2SFPQ
MXEPET112ENSG00000059691.7chr4-1526291391526292531526371601526372831526263361526264211526380271526382260.070000.015300.075931includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PET112 is not avaliable on ENCORE database.