MFSD2B

General Information

Gene Name       : MFSD2B
Gene ID             : ENSG00000205639.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MFSD2B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MFSD2BENSG00000205639.100.000.050.03ENCSR000AEF
HepG2MFSD2BENSG00000205639.100.170.030.10ENCSR985KAT
K562MFSD2BENSG00000205639.107.757.057.40ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MFSD2B is not avaliable on ENCORE database.



Proteins bound to RNA
  • MFSD2B RNA is bound by 24 proteins.  







eCLIP assay for MFSD2B is not avaliable on ENCORE database.





24 proteins are bound to MFSD2B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr22428590924286013+3'-UTR,CDS,intron-Proximal3.765275.19325HepG2LARP4
chr22424715724247190+3'-UTR,intron-Proximal4.445568.01338K562AQR
chr22424713524247157+3'-UTR,CDS,intron-Proximal3.807386.42898K562AQR
chr22423975224239795+CDS3.406224.59961K562NONO
chr22423611424236177+CDS,intron-Proximal4.057413.07008K562NONO
chr22423982424239909+CDS,intron-Proximal4.854107.99471K562NONO
chr22423908224239121+CDS3.410544.71513K562NONO
chr22424639824246476+CDS,intron-Proximal4.5778020.14498K562SF3B4
chr22424140424241460+intron-Distal3.635513.04123K562LIN28B
chr22424135724241414+intron-Distal3.744673.55454HepG2SUB1
chr22424135524241467+intron-Distal4.6058112.89808K562METAP2
chr22424137124241377+intron-Distal3.6483611.71300K562YBX3
chr22427282924272991+intron-Distal,intron-Proximal3.267646.18982HepG2NKRF
chr22427331524273433+intron-Distal3.310643.84715HepG2HNRNPK
chr22424128324241327+intron-Distal3.852099.05969K562YBX3
chr22424140124241463+intron-Distal3.1522711.58471K562IGF2BP1
chr22427522924275285+intron-Distal3.724634.62831HepG2PCBP2
chr22424130224241347+intron-Distal3.721323.67576K562IGF2BP2
chr22424005124240129+intron-Distal,intron-Proximal4.030196.09306K562NONO
chr22424140524241411+intron-Distal4.5567414.81003K562YBX3
chr22424000124240051+intron-Distal3.035684.10340K562NONO
chr22427282224272982+intron-Distal,intron-Proximal3.354734.70712HepG2MATR3
chr22424139924241460+intron-Distal7.1519528.63496K562UPF1
chr22423319524233275+intron-Distal3.582393.60615K562SLTM
chr22426878524268810+intron-Distal4.021203.15719K562SMNDC1
chr22424136424241454+intron-Distal5.3062512.01725K562PCBP1
chr22423320624233295+intron-Distal3.348484.10340K562NONO
chr22424136424241399+intron-Distal3.420973.06957K562DDX55
chr22424130624241347+intron-Distal3.450683.07801K562UPF1
chr22424128524241329+intron-Distal4.267256.09386K562DDX55
chr22424141324241460+intron-Distal6.63327400.00000K562PABPC4
chr22427261424272757+5'-UTR,CDS,intron-Distal,intron-Proximal3.791186.05537HepG2DDX3X
chr22424132724241361+intron-Distal3.015144.03582K562YBX3
chr22424141324241462+intron-Distal4.3773223.85652K562IGF2BP2
chr22424134724241413+intron-Distal5.3307114.75674K562IGF2BP2
chr22424137124241399+intron-Distal4.636673.20319K562UPF1
chr22423333224233456+intron-Distal3.725935.61877K562NONO
chr22427279524272905+intron-Distal,intron-Proximal3.397965.52022HepG2FAM120A
chr22427522524275302+intron-Distal3.588545.03283HepG2RBFOX2
chr22424139924241412+intron-Distal3.808483.92010K562DDX55
chr22424137724241405+intron-Distal4.1626113.37575K562YBX3
chr22423966724239707+intron-Proximal3.139713.14365K562NONO
chr22423309424233162+intron-Proximal3.038893.38183K562NONO
chr22427684424276911+intron-Proximal3.770934.04185HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MFSD2B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MFSD2B is not available on ENCORE database.

  • 68 RBPs can affect the levels of MFSD2B.  








The Knockdown/knockout RNA-Seq assay for MFSD2B is not available on ENCORE database.





68 RBPs can affect the gene expression of MFSD2B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MFSD2BENSG00000205639.534.398602.712903.664306.518805.64620HepG2BOP1
MFSD2BENSG00000205639.514.550002.490302.546502.014301.41740HepG2CPSF6
MFSD2BENSG00000205639.519.853804.170302.251102.401701.76340HepG2DKC1
MFSD2BENSG00000205639.516.720601.876603.155302.714002.12710HepG2EIF2S1
MFSD2BENSG00000205639.592.492402.072205.4800021.5185019.77740HepG2EIF4A3
MFSD2BENSG00000205639.527.990801.941503.849605.703104.76180HepG2G3BP1
MFSD2BENSG00000205639.538.795602.822003.781006.926105.94310HepG2GPKOW
MFSD2BENSG00000205639.515.239201.606203.246002.439801.78570HepG2HNRNPC
MFSD2BENSG00000205639.518.736301.595503.553703.966703.25180HepG2HNRNPU
MFSD2BENSG00000205639.539.231502.096604.225807.813006.72450HepG2MAGOH
MFSD2BENSG00000205639.521.723502.107503.365603.427202.73160HepG2MATR3
MFSD2BENSG00000205639.529.451702.156503.771505.266104.40530HepG2NCBP2
MFSD2BENSG00000205639.531.408101.917404.033806.601305.49380HepG2PABPC4
MFSD2BENSG00000205639.543.576203.846403.501906.086505.24760HepG2PUF60
MFSD2BENSG00000205639.524.054104.079402.559803.068702.36140HepG2PUM2
MFSD2BENSG00000205639.533.798409.772401.790103.169102.44540HepG2RPLP0
MFSD2BENSG00000205639.527.502303.569602.945604.174102.27620HepG2RTF1
MFSD2BENSG00000205639.521.176703.221002.716802.977602.00030HepG2SERBP1
MFSD2BENSG00000205639.546.958205.643003.056804.201803.64870HepG2SRSF1
MFSD2BENSG00000205639.5154.650309.234904.0657033.3671032.03810HepG2SSB
MFSD2BENSG00000205639.540.966007.264102.495503.728902.96030HepG2SUPV3L1
MFSD2BENSG00000205639.540.310901.651204.609504.941203.54690HepG2TBRG4
MFSD2BENSG00000205639.532.086401.546204.375007.484306.73510HepG2TIAL1
MFSD2BENSG00000205639.520.559905.227201.975602.316501.69490HepG2ZC3H8
MFSD2BENSG00000205639.514.543902.047402.828402.513101.98470HepG2ZNF622
MFSD2BENSG00000205639.5144.52300253.86680-0.812804.454602.91570K562AARS
MFSD2BENSG00000205639.5538.02120380.072900.501303.167601.84280K562ABCF1
MFSD2BENSG00000205639.5171.34220267.74350-0.644003.892403.23950K562AGGF1
MFSD2BENSG00000205639.5208.47170278.59090-0.418301.927901.37850K562AKAP8L
MFSD2BENSG00000205639.5292.57650203.027400.527002.754401.70430K562CCAR1
MFSD2BENSG00000205639.5916.12430579.107700.661607.637706.04430K562CELF1
MFSD2BENSG00000205639.5115.15010221.04810-0.940803.558901.37910K562DAZAP1
MFSD2BENSG00000205639.5385.11850227.305900.760605.452103.45800K562DHX30
MFSD2BENSG00000205639.5184.73100299.83570-0.698705.061103.82370K562DKC1
MFSD2BENSG00000205639.5501.87040276.990400.857405.966504.08160K562EEF2
MFSD2BENSG00000205639.5300.53540191.518400.650004.542402.96810K562EIF2S1
MFSD2BENSG00000205639.51053.19250470.941501.1610026.0443023.46130K562EIF4G2
MFSD2BENSG00000205639.5476.10830273.208400.801206.988905.58500K562FIP1L1
MFSD2BENSG00000205639.5147.14500229.33240-0.640202.896602.02170K562FMR1
MFSD2BENSG00000205639.5127.17490189.45070-0.575002.504501.92270K562FXR1
MFSD2BENSG00000205639.5518.41160278.216500.8978010.677508.57500K562GLRX3
MFSD2BENSG00000205639.5302.14200215.132400.489902.342801.61120K562GPKOW
MFSD2BENSG00000205639.5157.38870277.64210-0.818905.024004.24260K562HNRNPC
MFSD2BENSG00000205639.5485.99620312.439300.637305.262703.75340K562HNRNPL
MFSD2BENSG00000205639.5112.07270224.71720-1.003705.300603.96190K562HNRNPM
MFSD2BENSG00000205639.5554.43260434.260200.352402.399301.56670K562HNRNPU
MFSD2BENSG00000205639.5278.21230370.41340-0.412902.001301.31980K562HSPD1
MFSD2BENSG00000205639.5473.56800269.497900.813203.967302.24250K562ILF2
MFSD2BENSG00000205639.5446.87150212.132301.0748010.296507.64730K562ILF3
MFSD2BENSG00000205639.5146.35070269.04330-0.878405.689603.58750K562LARP7
MFSD2BENSG00000205639.5109.71120204.23250-0.896505.278104.10710K562MAGOH
MFSD2BENSG00000205639.5194.12000331.23630-0.770905.478504.10890K562MBNL1
MFSD2BENSG00000205639.591.07350181.91940-0.998205.391003.68240K562NCBP2
MFSD2BENSG00000205639.5569.51790325.043100.809008.920807.68330K562NSUN2
MFSD2BENSG00000205639.5472.71670283.251500.738802.950601.67140K562PABPC1
MFSD2BENSG00000205639.5103.52650199.61790-0.947205.674203.67020K562PCBP1
MFSD2BENSG00000205639.586.22220181.72360-1.075605.441504.05920K562PCBP2
MFSD2BENSG00000205639.5448.41650310.144800.531803.453502.52130K562PPIG
MFSD2BENSG00000205639.5107.03930260.40650-1.282608.908807.56030K562PRPF8
MFSD2BENSG00000205639.572.31180198.42170-1.4563011.3179010.03690K562PTBP1
MFSD2BENSG00000205639.5281.71730513.82620-0.867007.752206.38080K562PUF60
MFSD2BENSG00000205639.5783.08620546.581200.518604.928203.47110K562PUM1
MFSD2BENSG00000205639.5164.04270276.34500-0.752403.845903.22060K562PUS1
MFSD2BENSG00000205639.563.34450127.06480-1.004303.196301.65280K562RAVER1
MFSD2BENSG00000205639.5172.07190265.21980-0.624202.815701.99240K562RPS19
MFSD2BENSG00000205639.5498.57850275.486900.855706.763203.99310K562SAFB2
MFSD2BENSG00000205639.555.16840137.09440-1.313303.304001.95610K562SF1
MFSD2BENSG00000205639.579.93710138.40800-0.792003.351902.40960K562SF3B4
MFSD2BENSG00000205639.5344.76370223.583800.624703.914402.38940K562SLBP
MFSD2BENSG00000205639.5115.24590194.51500-0.755203.571202.77430K562SRSF1
MFSD2BENSG00000205639.5495.86640327.865500.596703.879602.35590K562STAU1
MFSD2BENSG00000205639.5183.42800267.90640-0.546502.906002.06320K562SYNCRIP
MFSD2BENSG00000205639.5362.08580196.871500.879006.840005.68170K562TARDBP
MFSD2BENSG00000205639.5373.45810239.440500.641203.710402.62540K562TIAL1
MFSD2BENSG00000205639.5441.82750254.466300.795906.266904.71010K562TRIM56
MFSD2BENSG00000205639.5532.96750344.646100.628806.178705.15550K562UPF1
MFSD2BENSG00000205639.5141.28060280.12510-0.987504.499002.70160K562UTP18
MFSD2BENSG00000205639.5679.63570411.452100.723907.918505.78730K562WRN
MFSD2BENSG00000205639.5773.90210390.967200.9850010.557008.74390K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MFSD2B is not available on ENCORE database.





14 RBPs can affect the splicing of MFSD2B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMFSD2BENSG00000205639.5chr2+242769732427706224276771242768192428368324283796-0.329000.000010.00110excludedHepG2RBM22
SEMFSD2BENSG00000205639.5chr2+242769732427706224276771242768192428368324283796-0.279000.000010.00050excludedHepG2U2AF1
SEMFSD2BENSG00000205639.5chr2+242769732427706224276771242768192428368324283796-0.258000.000010.00201excludedHepG2PRPF8
SEMFSD2BENSG00000205639.5chr2+242769732427706224276771242768192428368324283796-0.207000.000750.05870excludedHepG2TBRG4
SEMFSD2BENSG00000205639.5chr2+242769732427706224276771242768192428368324283796-0.410000.000060.00125excludedHepG2U2AF2
SEMFSD2BENSG00000205639.5chr2+242769732427706224276771242768192428368324283796-0.174000.000370.01963excludedHepG2MATR3
SEMFSD2BENSG00000205639.5chr2+242769732427706224276771242768192428368324283796-0.207000.000200.02969excludedHepG2PCBP2
SEMFSD2BENSG00000205639.5chr2+242769732427706224276771242768192428368324283796-0.338000.000020.00272excludedHepG2TIAL1
SEMFSD2BENSG00000205639.5chr2+242769732427706224276771242768192428368324283796-0.200000.000030.00579excludedHepG2SUPV3L1
SEMFSD2BENSG00000205639.5chr2+242769732427706224276771242768192428368324283796-0.285000.000000.00057excludedHepG2PCBP1
SEMFSD2BENSG00000205639.5chr2+242769732427706224276771242768192428368324283796-0.273000.002440.08375excludedHepG2HNRNPU
SEMFSD2BENSG00000205639.5chr2+242769732427706224276771242768192428368324283796-0.285000.001470.05238excludedHepG2HNRNPC
MXEMFSD2BENSG00000205639.5chr2+2427697324277062242773422427741024276771242768192428368324283796-0.535000.000080.002642includedHepG2U2AF1
MXEMFSD2BENSG00000205639.5chr2+2427697324277062242773422427748624276771242768192428368324283796-0.267000.000640.005552includedHepG2U2AF2
MXEMFSD2BENSG00000205639.5chr2+2427697324277062242771012427725924276771242768192428368324283796-0.397000.000000.000012includedHepG2U2AF2
MXEMFSD2BENSG00000205639.5chr2+2427697324277062242773422427741024276771242768192428368324283796-0.460000.000000.000002includedHepG2U2AF2
MXEMFSD2BENSG00000205639.5chr2+2427697324277062242773422427748624276771242768192428368324283796-0.275000.002320.064172includedHepG2PCBP1
MXEMFSD2BENSG00000205639.5chr2+2427697324277062242773422427741024276771242768192428368324283796-0.424000.000090.004642includedHepG2PCBP1
MXEMFSD2BENSG00000205639.5chr2+24276973242770622427734224277410242767712427681924283683242837960.202000.001140.071871includedHepG2SRSF7
MXEMFSD2BENSG00000205639.5chr2+2427697324277062242773422427741024276771242768192428368324283796-0.190000.001100.041472includedHepG2HNRNPL

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MFSD2B is not avaliable on ENCORE database.