SNHG16

General Information

Gene Name       : SNHG16
Gene ID             : ENSG00000163597.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SNHG16)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SNHG16ENSG00000163597.1466.8562.4464.64ENCSR000AEF
HepG2SNHG16ENSG00000163597.14123.33176.69150.01ENCSR985KAT
K562SNHG16ENSG00000163597.14106.7892.3199.55ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SNHG16 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SNHG16 RNA is bound by 38 proteins.  







eCLIP assay for SNHG16 is not avaliable on ENCORE database.





38 proteins are bound to SNHG16 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr177455492074554948+intron-Distal,intron-Proximal3.5980659.15590K562SMNDC1
chr177455404874554086+intron-Distal,intron-Proximal3.366173.54718K562PRPF8
chr177455720374557230+intron-Distal3.954036.10456K562SSB
chr177455776274557780+intron-Distal4.3205420.25655HepG2NIP7
chr177455775774557768+intron-Distal3.4740052.98670K562SMNDC1
chr177455772374557781+intron-Distal4.8992548.22236K562SF3B4
chr177455771874557723+intron-Distal7.65411138.27900HepG2NOLC1
chr177455719274557233+intron-Distal3.8687013.55384HepG2NOL12
chr177455491974554948+intron-Distal,intron-Proximal5.12295400.00000K562ZRANB2
chr177455772174557785+intron-Distal6.89995400.00000K562AATF
chr177455987974559913+intron-Distal3.205556.96241K562HNRNPC
chr177455487474554909+intron-Distal5.10985400.00000HepG2NOLC1
chr177455493274554952+intron-Distal,intron-Proximal6.53058400.00000HepG2NOLC1
chr177455772674557785+intron-Distal4.4242030.39247HepG2LARP7
chr177455723774557250+intron-Distal6.38340400.00000HepG2NOLC1
chr177455720474557217+intron-Distal5.25750400.00000K562SMNDC1
chr177455723374557268+intron-Distal3.0239410.46350K562PTBP1
chr177455772074557785+intron-Distal3.4880121.90890HepG2SDAD1
chr177455723474557268+intron-Distal3.7394148.97212HepG2DKC1
chr177455721774557227+intron-Distal4.67130400.00000K562SMNDC1
chr177455774674557774+intron-Distal3.864806.14207K562DROSHA
chr177455988074559893+intron-Distal3.1115614.40067K562U2AF1
chr177455772574557779+intron-Distal4.361696.93645K562PCBP1
chr177455773074557785+intron-Distal4.077853.53396K562ZC3H8
chr177455775874557775+intron-Distal6.31630400.00000HepG2DKC1
chr177455991374559944+intron-Distal3.232096.89832K562HNRNPC
chr177455719474557198+intron-Distal6.92207400.00000HepG2NIP7
chr177455491674554947+intron-Distal,intron-Proximal5.90541400.00000HepG2LARP7
chr177455772874557783+intron-Distal4.037756.64543K562UTP18
chr177455723374557265+intron-Distal4.8947223.64933K562AATF
chr177455396374554040+intron-Distal,intron-Proximal4.0453918.60700K562PRPF8
chr177455721874557257+intron-Distal3.9452016.81141K562XRCC6
chr177455775074557786+intron-Distal3.6477330.59164HepG2NOL12
chr177455719774557231+intron-Distal6.69393400.00000K562AATF
chr177455773074557759+intron-Distal4.7392453.72965HepG2NIP7
chr177455774474557776+intron-Distal5.8814119.63452K562XRCC6
chr177455634074556391+intron-Distal3.308793.20171HepG2ILF3
chr177455719874557222+intron-Distal6.30310400.00000HepG2NIP7
chr177455773674557773+intron-Distal5.2090941.75080K562PHF6
chr177455722274557231+intron-Distal6.29956400.00000HepG2NIP7
chr177455722774557240+intron-Distal4.30994400.00000K562SMNDC1
chr177455774974557752+intron-Distal8.07391400.00000HepG2NOLC1
chr177455719974557230+intron-Distal3.2164436.56454K562RPS3
chr177455773674557750+intron-Distal3.3455018.64241HepG2NOL12
chr177455757874557640+intron-Distal,intron-Proximal5.399309.87486K562PRPF8
chr177455720374557231+intron-Distal3.9542829.76741K562PTBP1
chr177455771874557725+intron-Distal5.0182933.09191HepG2NIP7
chr177455487174554956+intron-Distal,intron-Proximal3.140736.75548K562UTP18
chr177455723574557271+intron-Distal,intron-Proximal4.091855.02626K562ZC3H8
chr177455777374557785+intron-Distal8.29273400.00000HepG2NOLC1
chr177455487474554915+intron-Distal4.2917940.65776HepG2NIP7
chr177455775274557757+intron-Distal8.29593400.00000HepG2NOLC1
chr177455491574554951+intron-Distal,intron-Proximal3.0133616.55401HepG2NIP7
chr177455723874557255+intron-Distal3.7844711.40227HepG2NIP7
chr177455775074557758+intron-Distal6.25140400.00000HepG2DKC1
chr177455491474554949+intron-Distal,intron-Proximal3.20709400.00000HepG2DKC1
chr177455490974554925+intron-Distal5.81524400.00000HepG2NOLC1
chr177455803274558130+intron-Distal4.087406.68220K562TARDBP
chr177455774374557762+intron-Distal3.911716.24264K562SSB
chr177455772074557786+intron-Distal3.3620051.65376K562PTBP1
chr177455719474557201+intron-Distal3.801665.58824K562SSB
chr177455719374557225+intron-Distal5.84291400.00000HepG2DKC1
chr177455778174557786+intron-Distal5.7024327.68090K562SF3B4
chr177455492574554932+intron-Distal,intron-Proximal6.46114400.00000HepG2NOLC1
chr177455720074557235+intron-Distal5.4599915.35989K562ZC3H8
chr177455722574557234+intron-Distal5.25542400.00000HepG2DKC1
chr177455773774557749+intron-Distal8.16326400.00000HepG2NOLC1
chr177455772374557786+intron-Distal3.1340620.94497HepG2WDR43
chr177455494974554956+intron-Distal,intron-Proximal3.067767.61288K562SMNDC1
chr177455720674557231+intron-Distal3.7323919.49013HepG2SDAD1
chr177455719174557233+intron-Distal3.1695313.43691K562PHF6
chr177455487274554952+intron-Distal,intron-Proximal3.6092941.77402K562AATF
chr177455774974557757+intron-Distal3.4630451.86541K562SMNDC1
chr177455988174559930+intron-Distal4.6725018.79212HepG2TIA1
chr177455719274557202+intron-Distal3.977567.30408HepG2SF3B4
chr177455719574557234+intron-Distal4.2296330.41505K562SF3B4
chr177455498074555016+intron-Distal,intron-Proximal4.629197.21864HepG2SF3A3
chr177455773374557785+intron-Distal3.0127130.44845K562WDR43
chr177455771974557750+intron-Distal6.34784400.00000HepG2DKC1
chr177455495074554952+intron-Distal,intron-Proximal3.3102611.83735HepG2DKC1
chr177455783874557905+intron-Distal3.132624.86963K562PRPF8
chr177455966174559712+intron-Distal,intron-Proximal4.854186.34565HepG2IGF2BP3
chr177455502474555065+intron-Distal,intron-Proximal4.7232123.04581K562DDX3X
chr177455490674554914+intron-Distal3.52619400.00000HepG2DKC1
chr177455721574557249+intron-Distal4.1335639.93323HepG2LARP7
chr177455720074557233+intron-Distal6.40834400.00000HepG2NOLC1
chr177455771274557791+intron-Distal5.084567.05980K562NIPBL
chr177455719274557200+intron-Distal5.561767.00568K562ZC3H8
chr177455490874554937+intron-Distal,intron-Proximal3.765044.77130K562ZC3H8
chr177455718374557264+intron-Distal4.419237.20900K562UTP18
chr177455776874557785+intron-Distal3.5435953.69642K562SMNDC1
chr177455719874557203+intron-Distal3.7164818.87105K562PTBP1
chr177455771774557784+intron-Distal4.667477.53307K562TBRG4
chr177455494974554956+intron-Distal,intron-Proximal7.2786126.67707K562ZRANB2
chr177455775774557773+intron-Distal8.58163400.00000HepG2NOLC1
chr177455965574559708+intron-Distal,intron-Proximal3.400004.37610K562IGF2BP1
chr177455955874559576+intron-Proximal5.2264111.22320HepG2SUB1
chr177455734174557403+intron-Proximal4.478664.28193HepG2AQR
chr177455392874553980+intron-Proximal4.251246.24305HepG2AQR
chr177455752974557556+intron-Proximal3.958593.45860K562TIA1
chr177455736374557386+intron-Proximal3.806165.47851K562SF3B4
chr177455753174557566+intron-Proximal4.403717.64759K562PRPF8
chr177455957674559624+intron-Proximal6.1251624.15382HepG2SUB1
chr177455745974557524+intron-Proximal5.3461626.13042HepG2PRPF8
chr177455748074557532+intron-Proximal4.9383111.42662K562AQR
chr177455399274554037+intron-Proximal5.4949317.21524HepG2U2AF2
chr177455955774559627+intron-Proximal3.845519.28755K562NOLC1
chr177455736874557395+intron-Proximal3.848964.86893HepG2SUB1
chr177455751374557575+intron-Proximal4.574754.86719K562RBM22
chr177455952074559572+intron-Proximal4.163447.59566HepG2IGF2BP3
chr177455392674553940+intron-Proximal3.831444.08943HepG2LIN28B
chr177455735574557401+intron-Proximal3.3106217.96839HepG2U2AF2
chr177455951674559578+intron-Proximal3.023284.41590HepG2IGF2BP1
chr177455391274554004+intron-Proximal4.1567566.89647HepG2PRPF8
chr177455396474553985+intron-Proximal4.4110814.10841K562AQR
chr177455736974557400+intron-Proximal4.563426.51488K562LIN28B
chr177455753274557577+intron-Proximal4.027314.15711K562AQR
chr177455393874553964+intron-Proximal4.1186010.58560K562AQR
chr177455392674553940+intron-Proximal3.6209018.44301K562DDX3X
chr177455752674557574+intron-Proximal3.392943.65452K562BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SNHG16 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SNHG16 is not available on ENCORE database.

  • 121 RBPs can affect the levels of SNHG16.  








The Knockdown/knockout RNA-Seq assay for SNHG16 is not available on ENCORE database.





121 RBPs can affect the gene expression of SNHG16 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SNHG16ENSG00000163597.103081.130202405.058600.357303.534102.33170HepG2AATF
SNHG16ENSG00000163597.102111.023302880.90610-0.4486010.754509.71950HepG2ACO1
SNHG16ENSG00000163597.102898.504106128.35490-1.0802018.2956017.05420HepG2AKAP1
SNHG16ENSG00000163597.101715.329002894.29330-0.7547023.9635022.04910HepG2AKAP8L
SNHG16ENSG00000163597.101801.657702326.67830-0.368902.735801.84100HepG2BCLAF1
SNHG16ENSG00000163597.101910.729701535.238700.315602.507101.93410HepG2BOP1
SNHG16ENSG00000163597.101657.857602188.92970-0.400904.647003.06700HepG2BUD13
SNHG16ENSG00000163597.102097.012202482.73150-0.243602.329001.61690HepG2CALR
SNHG16ENSG00000163597.103638.832904817.46620-0.404803.856602.95210HepG2CIRBP
SNHG16ENSG00000163597.103944.233502880.101900.4535013.8050012.55390HepG2CKAP4
SNHG16ENSG00000163597.102239.699404780.94980-1.0940011.8384010.29430HepG2CNOT7
SNHG16ENSG00000163597.103229.048002676.744300.270503.112602.03140HepG2YBX3
SNHG16ENSG00000163597.103262.630604373.81500-0.422908.283707.28440HepG2CELF1
SNHG16ENSG00000163597.105187.375004702.587200.141402.138701.47410HepG2DAZAP1
SNHG16ENSG00000163597.101736.353002653.97670-0.612109.118207.96000HepG2DDX21
SNHG16ENSG00000163597.103175.454002596.732700.290202.901101.96280HepG2DDX24
SNHG16ENSG00000163597.101394.319902463.34680-0.821109.495107.30990HepG2DDX27
SNHG16ENSG00000163597.103399.129505870.33930-0.7883011.9900010.77240HepG2DDX3X
SNHG16ENSG00000163597.102064.044502632.82960-0.351102.474401.73840HepG2DDX55
SNHG16ENSG00000163597.102368.970205043.12210-1.0901018.5873017.18010HepG2DDX6
SNHG16ENSG00000163597.101535.962402628.59760-0.7752013.0234011.58850HepG2DNAJC21
SNHG16ENSG00000163597.101327.393602520.85320-0.9253015.5495013.64390HepG2EEF2
SNHG16ENSG00000163597.101641.332502101.41200-0.356502.864301.73760HepG2EFTUD2
SNHG16ENSG00000163597.102387.403304847.69930-1.0219019.2592017.79270HepG2EIF2S1
SNHG16ENSG00000163597.102918.356105357.09550-0.8763012.3493011.02930HepG2EIF4A3
SNHG16ENSG00000163597.104363.815906275.46940-0.5241016.0348014.78410HepG2ETF1
SNHG16ENSG00000163597.101439.129501829.01030-0.345903.687902.31830HepG2FAM120A
SNHG16ENSG00000163597.101951.184102950.68170-0.596706.134505.03220HepG2FIP1L1
SNHG16ENSG00000163597.101624.482602191.38710-0.431903.634702.18920HepG2FKBP4
SNHG16ENSG00000163597.101780.477603443.57110-0.9516010.528908.55340HepG2FUS
SNHG16ENSG00000163597.103340.629505405.63570-0.694309.818608.58790HepG2FXR1
SNHG16ENSG00000163597.102754.751705014.23000-0.8641013.0042011.61810HepG2G3BP1
SNHG16ENSG00000163597.104180.826805323.62660-0.348602.997802.07060HepG2G3BP2
SNHG16ENSG00000163597.101991.567902883.77450-0.534105.730104.25120HepG2GNB2L1
SNHG16ENSG00000163597.101117.781801597.57430-0.515204.351703.56080HepG2GPKOW
SNHG16ENSG00000163597.103316.952804426.02590-0.416202.448001.40080HepG2GRSF1
SNHG16ENSG00000163597.101892.447002653.77650-0.487806.231305.31970HepG2HNRNPA1
SNHG16ENSG00000163597.101712.614002951.72220-0.7854013.0115011.60970HepG2HNRNPC
SNHG16ENSG00000163597.102709.046305096.75210-0.9118016.0205014.56000HepG2IGF2BP2
SNHG16ENSG00000163597.102841.352004783.49710-0.751503.115702.06890HepG2IGF2BP3
SNHG16ENSG00000163597.102892.707504661.13910-0.688305.861403.88380HepG2ILF3
SNHG16ENSG00000163597.103543.236105126.65450-0.533004.358703.07280HepG2KHSRP
SNHG16ENSG00000163597.103151.859602633.398600.259204.752903.42410HepG2KIF1C
SNHG16ENSG00000163597.101926.393103278.71550-0.767207.728105.67000HepG2KRR1
SNHG16ENSG00000163597.102309.575203117.09130-0.432603.002402.13460HepG2LARP4
SNHG16ENSG00000163597.102437.089805407.52540-1.1498023.8469022.03890HepG2MAGOH
SNHG16ENSG00000163597.104277.169705437.70110-0.346302.528501.92300HepG2MATR3
SNHG16ENSG00000163597.103133.575505565.71650-0.8288012.6191011.32160HepG2NCBP2
SNHG16ENSG00000163597.102092.965004956.29880-1.2437026.8225024.65630HepG2PABPC4
SNHG16ENSG00000163597.105855.840704893.504200.258904.521603.77770HepG2PCBP1
SNHG16ENSG00000163597.101046.017601692.26040-0.6940012.4587010.07990HepG2PKM
SNHG16ENSG00000163597.103548.830102825.111700.328905.644704.58100HepG2PRPF4
SNHG16ENSG00000163597.102594.971104979.42400-0.9403042.8675041.25820HepG2PTBP1
SNHG16ENSG00000163597.101866.774304451.42480-1.2537039.3275037.40080HepG2PUF60
SNHG16ENSG00000163597.103994.650504725.49340-0.242404.764604.03050HepG2PUM1
SNHG16ENSG00000163597.103820.284004721.97360-0.305703.643002.87840HepG2PUM2
SNHG16ENSG00000163597.101970.962002934.36370-0.5741016.8976015.60390HepG2PUS1
SNHG16ENSG00000163597.103725.856705392.62510-0.5334011.4345010.29360HepG2QKI
SNHG16ENSG00000163597.104128.173804894.23470-0.245602.281801.66430HepG2RBM25
SNHG16ENSG00000163597.102210.908005541.53740-1.3256083.6605081.74600HepG2NELFE
SNHG16ENSG00000163597.104098.448105161.34030-0.332706.688905.79030HepG2RECQL
SNHG16ENSG00000163597.102382.017503148.71610-0.402604.458303.62100HepG2RPLP0
SNHG16ENSG00000163597.101201.832801991.21720-0.7284012.4834011.29070HepG2RPS19
SNHG16ENSG00000163597.101954.788403142.12310-0.6847010.193708.74350HepG2RPS2
SNHG16ENSG00000163597.102240.514604802.12340-1.0998015.1096013.29980HepG2RPS3A
SNHG16ENSG00000163597.102197.957303207.47940-0.545306.658304.99770HepG2RPS5
SNHG16ENSG00000163597.102752.047102008.855300.454003.624102.74080HepG2RRP9
SNHG16ENSG00000163597.101659.949802611.33450-0.653609.905908.80490HepG2SAFB2
SNHG16ENSG00000163597.103848.394302636.368200.545602.269301.65800HepG2SF3A3
SNHG16ENSG00000163597.102260.548201509.003400.583007.429006.32280HepG2SF3B1
SNHG16ENSG00000163597.104383.840705184.04300-0.241903.815003.13860HepG2SF3B4
SNHG16ENSG00000163597.101970.796403045.37010-0.627809.511308.43230HepG2SMN1
SNHG16ENSG00000163597.103422.242505924.13670-0.7917039.1105037.79670HepG2SRFBP1
SNHG16ENSG00000163597.102360.299005411.09210-1.1970078.1978076.47680HepG2SRSF1
SNHG16ENSG00000163597.103116.161504395.26470-0.4962012.8408011.62480HepG2SRSF5
SNHG16ENSG00000163597.103509.830304402.27490-0.326806.703905.91220HepG2SRSF9
SNHG16ENSG00000163597.102471.718205143.50430-1.0572059.8026058.18650HepG2SSB
SNHG16ENSG00000163597.104258.178703269.346400.381102.816101.52450HepG2SSRP1
SNHG16ENSG00000163597.103890.788604998.51450-0.361409.170208.14940HepG2SUCLG1
SNHG16ENSG00000163597.101409.957402620.87750-0.8944012.6706011.40110HepG2SUPV3L1
SNHG16ENSG00000163597.103820.913004863.90440-0.348205.683204.92920HepG2TAF15
SNHG16ENSG00000163597.101934.699301486.254800.380303.301302.51630HepG2TARDBP
SNHG16ENSG00000163597.102050.757803211.23570-0.647003.000401.89020HepG2TBRG4
SNHG16ENSG00000163597.103816.496404469.04920-0.227702.107601.37590HepG2TIA1
SNHG16ENSG00000163597.101336.399902849.62090-1.0924018.5950017.51030HepG2TIAL1
SNHG16ENSG00000163597.102367.917902874.63760-0.279802.782202.21690HepG2TRIM56
SNHG16ENSG00000163597.103367.469204349.03220-0.369004.512803.36400HepG2TUFM
SNHG16ENSG00000163597.101099.199601548.18940-0.494104.535503.56160HepG2UCHL5
SNHG16ENSG00000163597.101644.438202338.05860-0.5077011.6509010.39720HepG2UPF1
SNHG16ENSG00000163597.102064.385102403.17430-0.219202.416901.42680HepG2UTP18
SNHG16ENSG00000163597.103224.996302257.299000.5146013.5925012.41400HepG2UTP3
SNHG16ENSG00000163597.103216.521404301.34750-0.419302.629301.56780HepG2XPO5
SNHG16ENSG00000163597.102594.368103459.60830-0.415202.497901.49390HepG2XRCC6
SNHG16ENSG00000163597.101969.995902788.04010-0.5011013.8720012.55980HepG2ZC3H8
SNHG16ENSG00000163597.101814.036602571.41260-0.5034014.6298013.61710HepG2ZNF622
SNHG16ENSG00000163597.104867.531702925.920500.7342020.1388018.72470K562AGGF1
SNHG16ENSG00000163597.104130.514703215.129100.361303.847402.64710K562AKAP8
SNHG16ENSG00000163597.106036.840503684.034100.7124012.3865011.27240K562AQR
SNHG16ENSG00000163597.102169.429002715.56920-0.323903.578902.20030K562DDX21
SNHG16ENSG00000163597.103035.250502499.585900.280003.741901.62420K562DDX24
SNHG16ENSG00000163597.101671.193802267.21840-0.440007.788205.56310K562DDX27
SNHG16ENSG00000163597.102486.078002864.32660-0.204302.383501.77220K562DDX47
SNHG16ENSG00000163597.101788.342202513.02490-0.490804.376602.27050K562DDX51
SNHG16ENSG00000163597.104227.020703276.176600.367506.364504.95190K562DKC1
SNHG16ENSG00000163597.10930.241701246.41340-0.422103.520901.98910K562DNAJC21
SNHG16ENSG00000163597.101733.634502408.52350-0.474303.153401.77900K562EEF2
SNHG16ENSG00000163597.102186.632202661.00770-0.283303.676702.86820K562EIF2S2
SNHG16ENSG00000163597.103822.069602492.303300.616806.608404.91760K562EIF3D
SNHG16ENSG00000163597.101360.456601701.41570-0.322603.546002.00330K562FUS
SNHG16ENSG00000163597.102089.078202563.10290-0.295003.782903.09210K562FXR1
SNHG16ENSG00000163597.103317.633102579.733300.362803.935402.19950K562G3BP1
SNHG16ENSG00000163597.101637.907902051.14900-0.324603.070902.44560K562HNRNPC
SNHG16ENSG00000163597.104016.754203137.826000.356202.695401.91010K562HSPD1
SNHG16ENSG00000163597.101626.190801205.021600.432302.625701.71890K562KRR1
SNHG16ENSG00000163597.103870.116003092.890400.323303.076601.92870K562MAK16
SNHG16ENSG00000163597.105314.716103619.580000.554109.655007.76290K562MBNL1
SNHG16ENSG00000163597.103356.117004936.69860-0.556807.719705.88770K562MSI2
SNHG16ENSG00000163597.103302.693802537.062300.380402.446401.62850K562NAA15
SNHG16ENSG00000163597.101145.630502131.78170-0.895905.450302.48360K562NFX1
SNHG16ENSG00000163597.103490.418702771.799500.332503.837102.23540K562PCBP1
SNHG16ENSG00000163597.104309.555002523.267600.7721015.2329012.81300K562PCBP2
SNHG16ENSG00000163597.101803.177602947.08210-0.708709.036207.53780K562PCBP3
SNHG16ENSG00000163597.101407.563702260.50990-0.6834012.5163010.86930K562POLR2G
SNHG16ENSG00000163597.103492.307602627.927300.410203.484202.54600K562PPIG
SNHG16ENSG00000163597.102926.484202264.771000.369703.565702.71270K562PRPF8
SNHG16ENSG00000163597.103674.000705053.29030-0.459905.249004.12790K562PUF60
SNHG16ENSG00000163597.102080.927903019.38450-0.537006.241505.46550K562PUS1
SNHG16ENSG00000163597.103809.931702941.912800.372905.799204.96720K562RBM15
SNHG16ENSG00000163597.104245.937902642.108500.6843011.357809.48590K562RBM22
SNHG16ENSG00000163597.103382.354402575.361800.393203.625701.96790K562RBM34
SNHG16ENSG00000163597.101349.808802780.33850-1.0425020.1559017.38120K562NELFE
SNHG16ENSG00000163597.101401.279902052.65580-0.550705.864604.33810K562RPS3
SNHG16ENSG00000163597.103273.593402456.830300.414005.169504.08080K562SF3A3
SNHG16ENSG00000163597.101625.438002517.07650-0.6309019.7573017.60370K562SRPK2
SNHG16ENSG00000163597.101413.041702700.91520-0.9346022.4600020.45260K562SRSF1
SNHG16ENSG00000163597.101981.946802423.34390-0.290103.703202.34120K562SRSF7
SNHG16ENSG00000163597.102735.333002267.353900.270602.774901.95410K562SYNCRIP
SNHG16ENSG00000163597.101858.522102733.61220-0.556706.621105.48430K562TARDBP
SNHG16ENSG00000163597.101201.850402321.09560-0.9495010.755008.69760K562UCHL5
SNHG16ENSG00000163597.101922.354702640.01480-0.4577010.147808.88370K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SNHG16 is not available on ENCORE database.





26 RBPs can affect the splicing of SNHG16 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESNHG16ENSG00000163597.10chr17+7455445574554682745538507455393974555026745551250.255000.000000.00000includedK562SRSF1
SESNHG16ENSG00000163597.10chr17+7455502674555125745538737455393974557369745574800.210000.000010.00383includedK562FTO
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.249000.000000.00000excludedK562SF3B4
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.141000.000000.00006excludedK562PRPF8
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.133000.000040.00139excludedHepG2U2AF1
SESNHG16ENSG00000163597.10chr17+7455502674555125745538737455393974557369745574800.302000.000000.00000includedHepG2HNRNPM
SESNHG16ENSG00000163597.10chr17+7455502674555125745538737455393974557369745574800.164000.000000.00082includedK562WDR43
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.101000.000240.00826excludedHepG2HNRNPK
SESNHG16ENSG00000163597.10chr17+7455502674555125745538737455393974557369745574800.108000.000310.03078includedHepG2TBRG4
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.226000.000090.00189excludedHepG2U2AF2
SESNHG16ENSG00000163597.10chr17+7455445574554682745538507455393974555026745551250.155000.000000.00000includedK562AQR
SESNHG16ENSG00000163597.10chr17+745550267455512574554437745546827455736974557484-0.070000.000010.00022excludedK562AQR
SESNHG16ENSG00000163597.10chr17+7455445574554682745538507455393974555026745551250.087000.000010.00164includedK562SUPV3L1
SESNHG16ENSG00000163597.10chr17+745550267455512574554455745546827455736974557480-0.061000.000000.00007excludedK562PUS1
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.118000.000030.00354excludedHepG2NCBP2
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.173000.000000.00000excludedK562EFTUD2
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.136000.000010.00175excludedHepG2PCBP2
SESNHG16ENSG00000163597.10chr17+7455502674555125745538737455393974557369745574800.189000.000000.00166includedK562HNRNPM
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.109000.000230.02147excludedHepG2HNRNPL
SESNHG16ENSG00000163597.10chr17+7455502674555125745538737455393974557369745574800.155000.000040.01599includedK562SBDS
SESNHG16ENSG00000163597.10chr17+7455502674555125745538737455393974557369745574800.119000.000240.00798includedHepG2SRSF1
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.173000.000000.00007excludedHepG2SF3A3
SESNHG16ENSG00000163597.10chr17+7455502674555125745538737455393974557369745574800.172000.000000.00010includedHepG2SUPV3L1
SESNHG16ENSG00000163597.10chr17+7455502674555092745538737455393974557369745574800.068000.000140.03275includedK562EIF4G2
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.131000.000000.00025excludedHepG2SF3B4
SESNHG16ENSG00000163597.10chr17+7455502674555125745538737455393974557369745574800.120000.000420.06918includedK562UPF1
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.098000.000290.01030excludedK562RBM15
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.137000.000000.00001excludedK562AGGF1
SESNHG16ENSG00000163597.10chr17+745550267455512574553873745539397455736974557480-0.126000.000100.00687excludedHepG2HNRNPU
SESNHG16ENSG00000163597.10chr17+7455502674555125745538737455393974557369745574800.117000.000460.02111includedHepG2HNRNPC
SESNHG16ENSG00000163597.10chr17+7455502674555125745538737455393974557369745574800.124000.000220.05287includedHepG2FUS
SESNHG16ENSG00000163597.10chr17+7455502674555125745538737455393974557369745574800.140000.000050.00141includedK562HNRNPC
A3SSSNHG16ENSG00000163597.10chr17+7455734374557484745573697455748474553859745551250.074000.000000.00000longerK562AQR
MXESNHG16ENSG00000163597.10chr17+74554455745545457455498474555125745538507455393974557369745574800.127000.000000.000001includedK562AQR
MXESNHG16ENSG00000163597.10chr17+74554455745545457455499874555125745538507455393974557369745574800.121000.000000.000001includedK562AQR
MXESNHG16ENSG00000163597.10chr17+74554455745545457455495074555125745538507455393974557369745574800.126000.000000.000001includedK562AQR
MXESNHG16ENSG00000163597.10chr17+74554455745545457455503374555125745538507455393974557369745574800.074000.001010.024611includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SNHG16 is not avaliable on ENCORE database.