EIF1B

General Information

Gene Name       : EIF1B
Gene ID             : ENSG00000114784.3
Essential Gene : No

Functions

Localization

Domains (AlphaFold: EIF1B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878EIF1BENSG00000114784.331.5934.1732.88ENCSR000AEF
HepG2EIF1BENSG00000114784.342.2779.7861.03ENCSR985KAT
K562EIF1BENSG00000114784.392.6875.7484.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for EIF1B is not avaliable on ENCORE database.



Proteins bound to RNA
  • EIF1B RNA is bound by 19 proteins.  







eCLIP assay for EIF1B is not avaliable on ENCORE database.





19 proteins are bound to EIF1B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr34035374240353824+3'-UTR4.757447.83850HepG2SUB1
chr34035381140353885+3'-UTR4.3872515.62451K562PABPC4
chr34035374340353835+3'-UTR3.309223.21497K562NOLC1
chr34035361340353744+3'-UTR6.5617732.06973K562IGF2BP1
chr34035362240353681+3'-UTR3.9316010.77312K562TIA1
chr34035354940353586+3'-UTR4.931103.98716K562IGF2BP1
chr34035353140353592+3'-UTR4.0395311.62089K562PABPC4
chr34035378340353851+3'-UTR4.016087.63804HepG2FUBP3
chr34035130040351384+5'-UTR3.3416421.46363K562SF3B4
chr34035137940351432+5'-UTR3.665548.85285K562RPS3
chr34035122440351336+5'-UTR3.2748919.87726K562PCBP1
chr34035134940351403+5'-UTR3.489993.44136K562IGF2BP1
chr34035120440351342+5'-UTR3.869395.74223HepG2PCBP2
chr34035139540351454+5'-UTR,CDS3.832747.67778K562IGF2BP2
chr34035124840351332+5'-UTR3.732773.88378K562IGF2BP2
chr34035134140351426+5'-UTR4.059934.61003HepG2IGF2BP3
chr34035134140351379+5'-UTR4.323528.89973K562RPS3
chr34035133940351395+5'-UTR3.196634.96617K562IGF2BP2
chr34035134440351373+5'-UTR3.4956823.54551K562U2AF2
chr34035130440351399+5'-UTR3.175316.22772HepG2AGGF1
chr34035134340351372+5'-UTR4.2380624.40605K562TIA1
chr34035304040353067+CDS,intron-Proximal3.185898.20368K562ZNF622
chr34035244740352503+CDS4.028753.90285K562IGF2BP1
chr34035238240352467+CDS,intron-Proximal7.1767123.14037K562IGF2BP2
chr34035296140353019+CDS3.169114.26492HepG2BCLAF1
chr34035246740352498+CDS5.023463.63655K562IGF2BP2
chr34035297440353068+CDS,intron-Proximal4.229594.50960HepG2GRWD1
chr34035254340352610+CDS,intron-Proximal3.879586.06472K562AQR
chr34035145440351464+CDS,intron-Proximal5.253414.54113K562IGF2BP2
chr34035149540351551+intron-Proximal4.768265.09266K562RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for EIF1B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for EIF1B is not available on ENCORE database.

  • 73 RBPs can affect the levels of EIF1B.  








The Knockdown/knockout RNA-Seq assay for EIF1B is not available on ENCORE database.





73 RBPs can affect the gene expression of EIF1B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
EIF1BENSG00000114784.3641.32170796.52320-0.312702.812102.20030HepG2ACO1
EIF1BENSG00000114784.31030.10630748.562700.460503.710202.57510HepG2ADAR
EIF1BENSG00000114784.3618.72270463.454400.416802.909301.80830HepG2CSTF2
EIF1BENSG00000114784.3871.133401184.05080-0.442805.343804.50290HepG2CELF1
EIF1BENSG00000114784.3529.01340747.92550-0.499604.019903.21640HepG2DDX21
EIF1BENSG00000114784.31059.41030762.020200.475304.567203.73510HepG2DKC1
EIF1BENSG00000114784.3722.450401196.27730-0.727607.589006.64400HepG2EIF2S1
EIF1BENSG00000114784.3964.00500659.457300.547704.409603.28820HepG2EIF3D
EIF1BENSG00000114784.3698.952301287.13430-0.880907.867306.73700HepG2EIF4B
EIF1BENSG00000114784.31478.516201203.166200.297202.186101.45590HepG2EIF4G2
EIF1BENSG00000114784.31669.113501460.817100.192201.830501.32070HepG2ETF1
EIF1BENSG00000114784.3946.911701333.77370-0.494204.142803.30800HepG2FXR1
EIF1BENSG00000114784.3964.973301237.34660-0.358702.214501.61640HepG2G3BP1
EIF1BENSG00000114784.31411.08020979.722800.526304.298103.51150HepG2GPKOW
EIF1BENSG00000114784.3674.41120941.93660-0.482002.589501.51600HepG2GRSF1
EIF1BENSG00000114784.3972.65040760.962800.354002.453901.84310HepG2HNRNPA1
EIF1BENSG00000114784.31015.21970840.852000.271802.633902.04230HepG2HNRNPU
EIF1BENSG00000114784.3960.526901341.72970-0.482203.487102.78580HepG2MATR3
EIF1BENSG00000114784.3717.96810935.18020-0.381302.866802.04370HepG2MSI2
EIF1BENSG00000114784.3910.093401262.32570-0.472003.761102.86980HepG2NOL12
EIF1BENSG00000114784.31101.07200829.059400.409303.162502.36350HepG2NSUN2
EIF1BENSG00000114784.3895.926401223.14900-0.449103.322402.53600HepG2PABPC4
EIF1BENSG00000114784.31029.221201256.11580-0.287402.980002.35370HepG2PCBP1
EIF1BENSG00000114784.3931.991201278.16210-0.455705.930205.19040HepG2PTBP1
EIF1BENSG00000114784.3978.779301279.24190-0.386204.080003.38970HepG2PUM1
EIF1BENSG00000114784.3985.587301278.28110-0.375103.497402.74730HepG2PUM2
EIF1BENSG00000114784.31138.852701384.24410-0.281502.454101.85970HepG2QKI
EIF1BENSG00000114784.31010.502301422.45730-0.493307.410506.60030HepG2NELFE
EIF1BENSG00000114784.31236.77720977.925200.338702.979402.27350HepG2RPLP0
EIF1BENSG00000114784.31297.41290925.413900.487404.485903.60430HepG2SF3B1
EIF1BENSG00000114784.31078.082301330.70060-0.303703.241402.60820HepG2SF3B4
EIF1BENSG00000114784.3942.089501155.52910-0.294602.763502.06240HepG2SLBP
EIF1BENSG00000114784.31548.188301197.304700.370705.310104.64510HepG2SSB
EIF1BENSG00000114784.31748.014901248.501100.485407.585506.73230HepG2TAF15
EIF1BENSG00000114784.3562.57050433.781000.375002.252301.56690HepG2UCHL5
EIF1BENSG00000114784.3936.81240672.477100.478202.845201.82730HepG2UPF2
EIF1BENSG00000114784.31221.84810722.797000.757308.765107.49250HepG2XRN2
EIF1BENSG00000114784.31363.55940964.800000.499009.174108.07070HepG2ZC3H8
EIF1BENSG00000114784.31191.38910801.866400.571103.970602.38820HepG2ZRANB2
EIF1BENSG00000114784.34377.020502880.759900.6034019.2189017.84140K562AGGF1
EIF1BENSG00000114784.34099.818203165.526000.373004.048702.81070K562AKAP8
EIF1BENSG00000114784.34437.672902997.562800.565908.617807.39950K562AKAP8L
EIF1BENSG00000114784.33094.434002209.318400.486006.032205.22290K562AQR
EIF1BENSG00000114784.34043.357803145.167900.362305.779104.40010K562ATP5C1
EIF1BENSG00000114784.34079.520503089.639600.400903.848002.68730K562CELF1
EIF1BENSG00000114784.32916.637402279.782700.355306.194805.27400K562DDX47
EIF1BENSG00000114784.34181.514003225.582500.374406.544405.11150K562DKC1
EIF1BENSG00000114784.33413.975702512.417900.442308.150806.55810K562EIF4G2
EIF1BENSG00000114784.32328.041901744.186500.416504.666402.76650K562G3BP1
EIF1BENSG00000114784.34612.119102191.221001.073607.017104.75170K562HNRNPA2B1
EIF1BENSG00000114784.31766.269401276.392200.468502.821001.88090K562HNRNPM
EIF1BENSG00000114784.33400.408302103.749700.6926010.944309.38840K562HSPD1
EIF1BENSG00000114784.34517.905703181.157800.506007.946706.36490K562KIF1C
EIF1BENSG00000114784.31521.000701917.33520-0.334103.153102.25440K562MAGOH
EIF1BENSG00000114784.33938.401603045.155300.371003.925102.57100K562MAK16
EIF1BENSG00000114784.31507.151701913.49250-0.344403.393802.35740K562MATR3
EIF1BENSG00000114784.34686.801503563.701100.395103.250102.25110K562MBNL1
EIF1BENSG00000114784.34208.070102497.896800.752307.827506.04570K562NAA15
EIF1BENSG00000114784.33568.772001915.892900.897304.384003.06290K562PABPN1
EIF1BENSG00000114784.31294.610901642.28820-0.343203.409602.51360K562POLR2G
EIF1BENSG00000114784.32305.788701761.623800.388303.580202.62710K562PPIG
EIF1BENSG00000114784.31594.781901034.692300.624107.456306.22540K562PRPF8
EIF1BENSG00000114784.31746.589401171.182300.576507.582505.94290K562PSIP1
EIF1BENSG00000114784.31496.479101862.78810-0.315903.017702.32760K562PTBP1
EIF1BENSG00000114784.33975.484502741.180600.536206.223905.00390K562PUF60
EIF1BENSG00000114784.36302.987302972.748901.0841026.0979024.42580K562PUS1
EIF1BENSG00000114784.32407.474601568.320600.618204.078902.29870K562RAVER1
EIF1BENSG00000114784.33957.227902896.504900.450108.210707.21900K562RBM15
EIF1BENSG00000114784.32542.524002053.022600.308403.002401.32540K562RBM17
EIF1BENSG00000114784.34327.430002356.964000.876504.268102.24210K562RBM39
EIF1BENSG00000114784.31332.739201879.81900-0.496204.944303.43500K562NELFE
EIF1BENSG00000114784.31785.644702693.66840-0.593106.829305.16810K562RPS3
EIF1BENSG00000114784.33559.492901751.669201.022804.881303.13430K562SF1
EIF1BENSG00000114784.33506.685302012.406200.801102.558301.39520K562SNRNP200
EIF1BENSG00000114784.31694.857201386.101700.290003.236001.96430K562SRSF7
EIF1BENSG00000114784.34183.314102406.657300.797503.699301.94940K562SUPT6H
EIF1BENSG00000114784.31497.110901848.22600-0.304002.219601.58200K562TARDBP
EIF1BENSG00000114784.31498.991901196.573300.325002.455201.57330K562TRIM56
EIF1BENSG00000114784.33542.365102046.523600.791403.387201.43010K562XPO5
EIF1BENSG00000114784.34221.507202367.757000.834104.133202.00400K562YTHDC2
EIF1BENSG00000114784.33035.601202488.631600.286502.544201.72360K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for EIF1B is not available on ENCORE database.





1 RBPs can affect the splicing of EIF1B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEEIF1BENSG00000114784.3chr3+403524284035254740351174403514634035296040353062-0.058000.000010.00090excludedK562TARDBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for EIF1B is not avaliable on ENCORE database.