BLOC1S6

General Information

Gene Name       : BLOC1S6
Gene ID             : ENSG00000104164.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BLOC1S6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BLOC1S6ENSG00000104164.1031.4126.4328.92ENCSR000AEF
HepG2BLOC1S6ENSG00000104164.1015.7026.3921.05ENCSR985KAT
K562BLOC1S6ENSG00000104164.1032.5529.5831.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BLOC1S6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • BLOC1S6 RNA is bound by 12 proteins.  







eCLIP assay for BLOC1S6 is not avaliable on ENCORE database.





12 proteins are bound to BLOC1S6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr154590159345901658+3'-UTR,intron-Distal3.425017.35556K562PUM2
chr154589872445898770+3'-UTR,intron-Distal4.376196.41483HepG2SUB1
chr154589943245899539+3'-UTR,intron-Distal3.622484.83406HepG2QKI
chr154590075145900852+3'-UTR,intron-Distal3.2784112.97935K562UPF1
chr154589859345898689+3'-UTR,CDS,intron-Distal4.337623.02457HepG2BCLAF1
chr154590161245901694+3'-UTR,intron-Distal3.601054.01064HepG2FUBP3
chr154589762445897656+3'-UTR,CDS,intron-Distal,intron-Proximal4.628536.47760K562YBX3
chr154589531845895387+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.188083.69775K562YBX3
chr154590021245900287+3'-UTR,intron-Distal4.968508.90208K562IGF2BP1
chr154590021445900257+3'-UTR,intron-Distal4.025643.89948K562YBX3
chr154590128945901329+3'-UTR,intron-Distal4.781855.38606K562FAM120A
chr154590142845901515+3'-UTR,intron-Distal3.485553.86052K562YBX3
chr154590135345901378+3'-UTR,intron-Distal5.126616.77594K562FAM120A
chr154590147245901504+3'-UTR,intron-Distal3.429715.05294K562UPF1
chr154590168645901792+3'-UTR,intron-Distal4.5400421.16718K562PUM2
chr154590108745901117+3'-UTR,intron-Distal4.131346.42251K562FAM120A
chr154587962345879692+5'-UTR,CDS5.216464.57565HepG2DDX3X
chr154587960345879717+5'-UTR,CDS3.467593.63681K562RBM15
chr154587965345879706+5'-UTR,CDS6.2892313.32692K562XRCC6
chr154589744045897515+intron-Distal5.198365.61339K562QKI
chr154589742745897543+intron-Distal,intron-Proximal4.587284.51735HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BLOC1S6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BLOC1S6 is not available on ENCORE database.

  • 75 RBPs can affect the levels of BLOC1S6.  








The Knockdown/knockout RNA-Seq assay for BLOC1S6 is not available on ENCORE database.





75 RBPs can affect the gene expression of BLOC1S6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BLOC1S6ENSG00000104164.6961.134801238.39500-0.365704.892604.12720HepG2ACO1
BLOC1S6ENSG00000104164.6789.226201216.30500-0.624002.809501.86450HepG2BCCIP
BLOC1S6ENSG00000104164.6741.524901057.02420-0.511402.358901.53130HepG2BCLAF1
BLOC1S6ENSG00000104164.6526.175701104.26980-1.0695017.1346015.82860HepG2BOP1
BLOC1S6ENSG00000104164.61554.556301063.167500.548003.823202.93800HepG2CALR
BLOC1S6ENSG00000104164.6785.327601238.15020-0.6568014.4529013.18210HepG2CKAP4
BLOC1S6ENSG00000104164.6700.247501013.79200-0.533804.741603.86180HepG2CPSF6
BLOC1S6ENSG00000104164.6707.088501119.07400-0.662303.320301.91980HepG2DDX27
BLOC1S6ENSG00000104164.61212.591301921.70160-0.664307.303906.33150HepG2DDX3X
BLOC1S6ENSG00000104164.6765.57340941.75950-0.298803.289602.58950HepG2DNAJC2
BLOC1S6ENSG00000104164.62545.140802058.046400.306404.435003.70610HepG2ETF1
BLOC1S6ENSG00000104164.6391.299201210.15480-1.6288042.1086039.35650HepG2EWSR1
BLOC1S6ENSG00000104164.61384.784701769.38080-0.353602.589701.92120HepG2FXR1
BLOC1S6ENSG00000104164.61046.632201641.42610-0.649206.478505.48440HepG2G3BP1
BLOC1S6ENSG00000104164.6902.855201149.24540-0.348102.055201.49840HepG2GPKOW
BLOC1S6ENSG00000104164.6797.905801067.01480-0.419303.401602.63990HepG2HNRNPC
BLOC1S6ENSG00000104164.6893.966701779.92480-0.9935013.3143012.00410HepG2MATR3
BLOC1S6ENSG00000104164.61268.56350952.685900.413003.699202.76640HepG2MSI2
BLOC1S6ENSG00000104164.6983.456401821.86860-0.8895011.7346010.47300HepG2NCBP2
BLOC1S6ENSG00000104164.61506.406301098.916200.454902.091301.33620HepG2PABPC1
BLOC1S6ENSG00000104164.61251.705801622.56900-0.374402.649301.94180HepG2PABPC4
BLOC1S6ENSG00000104164.61115.746301620.91210-0.538806.932906.04500HepG2PUF60
BLOC1S6ENSG00000104164.61262.792101764.87230-0.482906.882305.96240HepG2QKI
BLOC1S6ENSG00000104164.62151.435101720.149400.322703.960603.36920HepG2RBM22
BLOC1S6ENSG00000104164.61314.837601601.73070-0.284702.345901.71920HepG2RBM25
BLOC1S6ENSG00000104164.6551.429801508.27010-1.451606.023903.46650HepG2RBM39
BLOC1S6ENSG00000104164.6605.17250765.16800-0.338402.256001.69500HepG2RPS19
BLOC1S6ENSG00000104164.6738.074201238.58450-0.746908.343307.00300HepG2RPS2
BLOC1S6ENSG00000104164.6878.582701659.14040-0.917202.747201.40170HepG2SF1
BLOC1S6ENSG00000104164.6669.403701085.57810-0.697507.963406.82290HepG2SF3B1
BLOC1S6ENSG00000104164.61139.135101696.59880-0.5747011.2714010.20200HepG2SF3B4
BLOC1S6ENSG00000104164.6927.779601100.81310-0.246702.617901.98870HepG2SMN1
BLOC1S6ENSG00000104164.6829.675301480.57080-0.835502.587601.33440HepG2SNRNP200
BLOC1S6ENSG00000104164.62261.756101942.851600.219202.836702.33100HepG2SRFBP1
BLOC1S6ENSG00000104164.61651.568401168.031300.499702.904601.87370HepG2SRSF3
BLOC1S6ENSG00000104164.61728.210201440.700000.262403.203502.61880HepG2SRSF9
BLOC1S6ENSG00000104164.61546.567201820.07980-0.234903.313402.64560HepG2SUCLG1
BLOC1S6ENSG00000104164.61435.111301190.525700.269501.896901.32300HepG2SUPV3L1
BLOC1S6ENSG00000104164.61766.491601462.588300.272302.256601.49950HepG2TIA1
BLOC1S6ENSG00000104164.61285.302701006.979100.352002.351901.76820HepG2U2AF1
BLOC1S6ENSG00000104164.6209.59760703.36420-1.7466015.7349013.96200HepG2UCHL5
BLOC1S6ENSG00000104164.6570.904701196.34770-1.0673026.7190024.02390HepG2UTP18
BLOC1S6ENSG00000104164.6640.565401171.93830-0.871505.603104.58280HepG2XRN2
BLOC1S6ENSG00000104164.6894.15300743.838200.265402.391001.76080HepG2ZC3H8
BLOC1S6ENSG00000104164.62488.418302140.252800.217302.612502.05750K562AGGF1
BLOC1S6ENSG00000104164.64143.742603045.296900.444305.241904.47870K562AQR
BLOC1S6ENSG00000104164.62721.716202336.692900.219902.273901.45310K562ATP5C1
BLOC1S6ENSG00000104164.61384.625501683.22900-0.281703.391202.32290K562BCLAF1
BLOC1S6ENSG00000104164.61094.192601367.56290-0.321702.202601.43050K562BOP1
BLOC1S6ENSG00000104164.6464.65050608.68460-0.389502.426101.45250K562CCAR1
BLOC1S6ENSG00000104164.61086.516401454.10600-0.420404.476303.47960K562CPSF6
BLOC1S6ENSG00000104164.65087.309304124.679400.302503.759102.61620K562CELF1
BLOC1S6ENSG00000104164.61554.796402014.64820-0.373805.099302.68520K562DDX24
BLOC1S6ENSG00000104164.61137.855801475.94220-0.375305.029703.23640K562DDX27
BLOC1S6ENSG00000104164.62058.180202513.02890-0.288104.024103.25770K562DDX47
BLOC1S6ENSG00000104164.61541.337301866.98370-0.276502.901102.08670K562EIF3G
BLOC1S6ENSG00000104164.61646.170702065.86100-0.327604.118303.40220K562FXR1
BLOC1S6ENSG00000104164.62930.821801998.898400.552002.056901.46040K562G3BP2
BLOC1S6ENSG00000104164.62038.102302690.59180-0.400704.559503.59150K562GRSF1
BLOC1S6ENSG00000104164.6788.459201209.09110-0.616806.941103.90410K562GRWD1
BLOC1S6ENSG00000104164.61048.279801391.16360-0.408303.901203.20720K562HNRNPC
BLOC1S6ENSG00000104164.6965.574601242.29620-0.363503.097301.88370K562HNRNPF
BLOC1S6ENSG00000104164.61047.812601407.06900-0.425303.062402.07660K562HNRNPM
BLOC1S6ENSG00000104164.63000.680102363.433600.344303.474602.53850K562KIF1C
BLOC1S6ENSG00000104164.61084.427901410.92540-0.379702.770401.31720K562LIN28B
BLOC1S6ENSG00000104164.61707.312502644.64090-0.631308.298806.60080K562MATR3
BLOC1S6ENSG00000104164.6793.895801355.14620-0.7714011.508209.64220K562METAP2
BLOC1S6ENSG00000104164.61278.178701704.52990-0.415306.831605.60850K562MTPAP
BLOC1S6ENSG00000104164.62606.542601855.806200.490002.734601.85830K562NAA15
BLOC1S6ENSG00000104164.61607.245101893.89480-0.236803.483202.65530K562NSUN2
BLOC1S6ENSG00000104164.6888.897401247.31980-0.488704.279003.11960K562PSIP1
BLOC1S6ENSG00000104164.61971.983802574.42570-0.384604.104103.31150K562PTBP1
BLOC1S6ENSG00000104164.64817.724103893.052500.307303.673402.43160K562PUM1
BLOC1S6ENSG00000104164.63683.212902208.598200.7377011.6327010.56800K562PUS1
BLOC1S6ENSG00000104164.62658.219902151.950600.304703.748403.07380K562RBM15
BLOC1S6ENSG00000104164.61815.402802469.13520-0.443703.956802.93570K562RBM22
BLOC1S6ENSG00000104164.6830.691001137.99800-0.454104.550903.27610K562RCC2
BLOC1S6ENSG00000104164.61425.558601838.74830-0.367205.857703.55660K562RPS10
BLOC1S6ENSG00000104164.61079.552801415.86150-0.391202.854501.83540K562RPS3
BLOC1S6ENSG00000104164.61500.406302078.88830-0.470506.562305.20630K562SF3B4
BLOC1S6ENSG00000104164.6797.964901078.79370-0.435003.583402.37240K562SRFBP1
BLOC1S6ENSG00000104164.61651.578101914.60160-0.213202.530201.62980K562SRPK2
BLOC1S6ENSG00000104164.62095.669102523.67870-0.268102.341801.68410K562SRSF1
BLOC1S6ENSG00000104164.6994.337101367.04600-0.459303.572002.35340K562SRSF4
BLOC1S6ENSG00000104164.6903.557101416.35690-0.648506.899005.21050K562UCHL5
BLOC1S6ENSG00000104164.62424.711002008.136100.271903.956703.11060K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BLOC1S6 is not available on ENCORE database.





22 RBPs can affect the splicing of BLOC1S6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBLOC1S6ENSG00000104164.6chr15+458952974589538545884332458844744589762545897712-0.161000.000210.00586excludedK562SRSF1
SEBLOC1S6ENSG00000104164.6chr15+458952974589538545879433458797234589762545897712-0.242000.001370.02712excludedK562SF3B4
SEBLOC1S6ENSG00000104164.6chr15+458952974589538545879433458797234589762545897712-0.361000.000030.00210excludedK562PRPF8
SEBLOC1S6ENSG00000104164.6chr15+458843324588447445879576458797234589762545897712-0.289000.000000.00000excludedK562AKAP8L
SEBLOC1S6ENSG00000104164.6chr15+458843324588447445879576458797234589762545897712-0.214000.001040.02794excludedHepG2HNRNPK
SEBLOC1S6ENSG00000104164.6chr15+4589529745895385458794334587972345897625458977120.084000.000050.00108includedHepG2U2AF2
SEBLOC1S6ENSG00000104164.6chr15+458952974589538545884332458844744589762545897712-0.096000.003270.03288excludedK562AQR
SEBLOC1S6ENSG00000104164.6chr15+458843324588447445879576458797234589762545897712-0.387000.000000.00000excludedK562PUS1
SEBLOC1S6ENSG00000104164.6chr15+4588433245884474458795764587972345897625458977120.273000.001900.07282includedHepG2SFPQ
SEBLOC1S6ENSG00000104164.6chr15+458843324588447445879576458797234589529745895385-0.208000.000020.00189excludedHepG2PTBP1
SEBLOC1S6ENSG00000104164.6chr15+4589343145893586458843324588447445895297458953850.125000.000120.00964includedK562EFTUD2
SEBLOC1S6ENSG00000104164.6chr15+458952974589538545879433458797234589762545897712-0.280000.001390.06499excludedK562EFTUD2
SEBLOC1S6ENSG00000104164.6chr15+458843324588447445879320458797234589762545897712-0.189000.000480.03714excludedK562HNRNPL
SEBLOC1S6ENSG00000104164.6chr15+458952974589538545879433458797234589762545897712-0.137000.000660.04909excludedK562HNRNPUL1
SEBLOC1S6ENSG00000104164.6chr15+458843324588447445879320458797234589762545897712-0.195000.000560.08191excludedK562SRSF7
SEBLOC1S6ENSG00000104164.6chr15+458843324588447445879320458797234589762545897712-0.284000.000000.00001excludedK562UTP18
SEBLOC1S6ENSG00000104164.6chr15+458843324588447445879576458797234589762545897712-0.123000.001720.04119excludedK562RBM15
SEBLOC1S6ENSG00000104164.6chr15+458843324588447445879576458797234589762545897712-0.243000.000000.00015excludedK562AGGF1
SEBLOC1S6ENSG00000104164.6chr15+4589343145893586458843324588447445895297458953850.060000.001760.06233includedK562SF3B1
SEBLOC1S6ENSG00000104164.6chr15+458843324588447445879320458797234589529745895385-0.244000.001640.05699excludedHepG2HNRNPC
SEBLOC1S6ENSG00000104164.6chr15+458843324588447445879320458797234589529745895385-0.227000.000100.03021excludedK562SAFB
SEBLOC1S6ENSG00000104164.6chr15+458843324588447445879320458797234589529745895385-0.147000.000800.03400excludedK562PTBP1
SEBLOC1S6ENSG00000104164.6chr15+458953014589538545884332458844744589762545897712-0.132000.000600.08779excludedK562NPM1
SEBLOC1S6ENSG00000104164.6chr15+458952974589538545879433458797234589762545897712-0.268000.000990.01908excludedK562HNRNPC
A3SSBLOC1S6ENSG00000104164.6chr15+4589529745895385458953014589538545884332458844740.254000.003030.06411longerHepG2U2AF2
MXEBLOC1S6ENSG00000104164.6chr15+4588433245884474458975844589771245879320458797234589859245899971-0.086000.014750.086502includedK562AQR
MXEBLOC1S6ENSG00000104164.6chr15+45893431458936054589530145895385458843324588447445897625458977120.052000.001940.081201includedK562UTP18
MXEBLOC1S6ENSG00000104164.6chr15+4588433245884474458952974589538545879982458800744589762545897712-0.134000.001200.070102includedHepG2AKAP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BLOC1S6 is not avaliable on ENCORE database.