PSMB5

General Information

Gene Name       : PSMB5
Gene ID             : ENSG00000100804.18
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: PSMB5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PSMB5ENSG00000100804.1849.0557.4953.27ENCSR000AEF
HepG2PSMB5ENSG00000100804.18652.11572.13612.12ENCSR985KAT
K562PSMB5ENSG00000100804.18139.88135.02137.45ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PSMB5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PSMB5 RNA is bound by 20 proteins.  







eCLIP assay for PSMB5 is not avaliable on ENCORE database.





20 proteins are bound to PSMB5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr142349552523495557-3'-UTR,CDS,intron-Distal4.096474.43788HepG2SUB1
chr142349510623495183-3'-UTR,intron-Distal,intron-Proximal3.477249.65383K562IGF2BP1
chr142349528023495332-3'-UTR,CDS,intron-Distal3.459004.27595K562NOLC1
chr142349528523495323-3'-UTR,CDS,intron-Distal6.2446715.24982HepG2SUB1
chr142349511623495154-3'-UTR,intron-Distal3.6491819.07688HepG2LARP4
chr142349513623495165-3'-UTR,intron-Distal4.2588711.39016K562PABPC4
chr142349521823495273-3'-UTR,intron-Distal3.263455.25539K562PABPC4
chr142349510123495174-3'-UTR,intron-Distal,intron-Proximal4.5553922.95511K562TIA1
chr142349520323495279-3'-UTR,intron-Distal3.1716623.46592HepG2LARP4
chr142349542823495470-3'-UTR,CDS,intron-Distal,intron-Proximal3.059684.45018HepG2RPS3
chr142349542523495513-3'-UTR,CDS,intron-Distal,intron-Proximal3.081258.28530K562LIN28B
chr142349554323495612-3'-UTR,CDS,intron-Distal4.106497.08450HepG2AQR
chr142349535423495389-3'-UTR,CDS,intron-Distal3.659096.57537HepG2G3BP1
chr142349516523495178-3'-UTR,intron-Distal4.9328312.05885K562PABPC4
chr142349521323495285-3'-UTR,intron-Distal6.6186736.29760HepG2SUB1
chr142349538923495476-3'-UTR,CDS,intron-Distal,intron-Proximal3.0299910.56905HepG2G3BP1
chr142349527923495332-3'-UTR,CDS,intron-Distal3.3722310.68825HepG2LARP4
chr142349510423495161-3'-UTR,intron-Distal,intron-Proximal5.3028813.91692HepG2TIA1
chr142349526123495297-3'-UTR,intron-Distal3.541707.29565HepG2RPS3
chr142349522623495269-3'-UTR,intron-Distal4.262144.69795K562NOLC1
chr142349534123495401-3'-UTR,CDS,intron-Distal3.128818.20310HepG2LARP4
chr142349522423495281-3'-UTR,intron-Distal3.988143.25521K562LIN28B
chr142349524623495314-3'-UTR,CDS,intron-Distal3.379173.72790K562APOBEC3C
chr142349517423495209-3'-UTR,intron-Distal3.662303.08258K562TIA1
chr142349515423495185-3'-UTR,intron-Distal3.4822518.79697HepG2LARP4
chr142349516123495178-3'-UTR,intron-Distal6.1541412.96453HepG2TIA1
chr142349521523495267-3'-UTR,intron-Distal3.351186.28065HepG2GRSF1
chr142349551923495584-3'-UTR,CDS,intron-Distal4.1263616.18820HepG2G3BP1
chr142350280623502871-5'-UTR,CDS,intron-Distal3.6905214.91664HepG2G3BP1
chr142350271523502773-5'-UTR,CDS,intron-Distal4.1154916.31987HepG2RPS3
chr142350263623502684-5'-UTR,CDS,intron-Distal3.138268.05636HepG2G3BP1
chr142350259823502636-5'-UTR,CDS,intron-Distal3.074594.35392HepG2G3BP1
chr142350279223502848-5'-UTR,CDS,intron-Distal3.589753.70236HepG2RBM15
chr142350257623502590-5'-UTR,CDS,intron-Distal,intron-Proximal3.958386.53930HepG2G3BP1
chr142350377323503817-5'-UTR,intron-Distal4.518885.17013K562RBM15
chr142350362323503729-5'-UTR,intron-Distal4.079018.40329HepG2PRPF4
chr142350265123502701-5'-UTR,CDS,intron-Distal3.973087.71026K562PABPC4
chr142350287423502884-5'-UTR,CDS,intron-Distal,intron-Proximal4.1113214.00803HepG2RPS3
chr142350281823502884-5'-UTR,CDS,intron-Distal,intron-Proximal5.1962411.62844K562RPS3
chr142350281623502865-5'-UTR,CDS,intron-Distal5.057885.85529K562RBM15
chr142350383723503917-5'-UTR,CDS,intron-Distal5.300008.88638HepG2AQR
chr142350251723502582-5'-UTR,CDS,intron-Distal,intron-Proximal3.901035.59977HepG2AQR
chr142350258623502601-5'-UTR,CDS,intron-Distal4.518606.19394HepG2RPS3
chr142350402523504092-5'-UTR,CDS,intron-Distal,intron-Proximal3.4741612.46362K562DDX3X
chr142350281823502862-5'-UTR,CDS,intron-Distal4.086179.53949HepG2RPS3
chr142350269923502806-5'-UTR,CDS,intron-Distal3.0011316.93588HepG2G3BP1
chr142350383623503912-5'-UTR,CDS,intron-Distal4.8128015.51998HepG2PRPF8
chr142350393423503984-CDS,intron-Distal,intron-Proximal3.169495.75883HepG2DDX3X
chr142350395023504036-CDS,intron-Distal,intron-Proximal3.143884.83911K562NOLC1
chr142350393423504023-CDS,intron-Distal,intron-Proximal4.2871211.23654K562RPS3
chr142350389223503934-CDS,intron-Distal6.9131815.60419K562RPS3
chr142350399323504038-CDS,intron-Distal,intron-Proximal4.9336816.31010HepG2SUB1
chr142350390223503922-CDS,intron-Distal4.0675913.38490HepG2RPS3
chr142350393623503993-CDS,intron-Distal,intron-Proximal5.8328129.82097HepG2SUB1
chr142350393723503986-CDS,intron-Distal,intron-Proximal4.6379334.20756HepG2RPS3
chr142350389123503902-CDS,intron-Distal3.9603214.47387HepG2RPS3
chr142350395723504033-CDS,intron-Distal,intron-Proximal3.510195.34973K562GEMIN5
chr142349975023499851-intron-Distal5.0252716.13383HepG2ILF3
chr142349837823498467-intron-Distal3.165854.68595K562ILF3
chr142350326023503338-intron-Distal3.671196.39201HepG2HNRNPC
chr142349850623498576-intron-Distal4.357024.33299K562ILF3
chr142350131123501357-intron-Distal4.130464.04710HepG2HNRNPC
chr142350126123501311-intron-Distal3.7029110.20234HepG2HNRNPC
chr142349935123499384-intron-Distal3.856633.24590HepG2ILF3
chr142350022923500331-intron-Distal3.902326.83369K562ILF3
chr142349571223495823-intron-Distal3.453083.76025HepG2ILF3
chr142349890023498981-intron-Distal3.195193.80809HepG2ILF3
chr142349976923499853-intron-Distal3.825388.07988K562ILF3
chr142349189923491963-intron-Distal3.190575.58362HepG2U2AF2
chr142349857623498724-intron-Distal3.630166.10043K562ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PSMB5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PSMB5 is not available on ENCORE database.

  • 99 RBPs can affect the levels of PSMB5.  








The Knockdown/knockout RNA-Seq assay for PSMB5 is not available on ENCORE database.





99 RBPs can affect the gene expression of PSMB5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PSMB5ENSG00000100804.143896.016504733.44430-0.280902.604501.56030HepG2AATF
PSMB5ENSG00000100804.148032.3464010280.53750-0.356008.143907.06730HepG2AUH
PSMB5ENSG00000100804.144137.085005813.80260-0.490905.215304.01670HepG2BCLAF1
PSMB5ENSG00000100804.1411105.474008663.090700.358203.388502.53790HepG2CIRBP
PSMB5ENSG00000100804.1410901.632009795.109500.154303.040102.26900HepG2DAZAP1
PSMB5ENSG00000100804.142717.909803435.89050-0.338203.784702.21410HepG2DDX52
PSMB5ENSG00000100804.141832.276903168.79000-0.790303.470902.37830HepG2DDX59
PSMB5ENSG00000100804.146839.762709068.55960-0.406903.303902.63570HepG2DDX6
PSMB5ENSG00000100804.143859.880304457.32920-0.207603.619602.89230HepG2DNAJC2
PSMB5ENSG00000100804.143604.955504809.33400-0.415902.983701.82750HepG2AGO1
PSMB5ENSG00000100804.145806.392008717.56560-0.586307.322406.39190HepG2EIF2S1
PSMB5ENSG00000100804.142806.021804932.17200-0.8137020.5352018.17840HepG2EIF3G
PSMB5ENSG00000100804.143455.955404257.10080-0.300802.749601.65940HepG2ESF1
PSMB5ENSG00000100804.147430.1673011803.53640-0.6678028.0828026.50160HepG2ETF1
PSMB5ENSG00000100804.145912.852609016.97970-0.608807.147606.10210HepG2G3BP1
PSMB5ENSG00000100804.147497.370509572.94240-0.352603.210302.24950HepG2G3BP2
PSMB5ENSG00000100804.142373.419002963.01970-0.320102.584801.72360HepG2GEMIN5
PSMB5ENSG00000100804.141754.643403162.86710-0.850106.926405.94320HepG2GPKOW
PSMB5ENSG00000100804.144876.926105606.19840-0.201102.778901.80070HepG2HDGF
PSMB5ENSG00000100804.143654.458704540.26980-0.313103.100002.42050HepG2HNRNPA1
PSMB5ENSG00000100804.147537.751309002.52350-0.256204.002902.91190HepG2HNRNPA2B1
PSMB5ENSG00000100804.145226.799906368.19630-0.285005.274604.32450HepG2HNRNPF
PSMB5ENSG00000100804.1410196.225408922.257100.192504.625703.77120HepG2HNRNPL
PSMB5ENSG00000100804.141896.637803018.41090-0.670305.408904.55840HepG2HNRNPLL
PSMB5ENSG00000100804.144164.810305016.77710-0.268504.571303.80850HepG2HNRNPU
PSMB5ENSG00000100804.145384.112506270.83210-0.219902.207501.55640HepG2IGF2BP1
PSMB5ENSG00000100804.147079.645109219.05180-0.380902.508901.56450HepG2KHSRP
PSMB5ENSG00000100804.144730.403905367.83830-0.182403.131002.04750HepG2KIF1C
PSMB5ENSG00000100804.147244.321109723.88610-0.424704.110703.31340HepG2MAGOH
PSMB5ENSG00000100804.147844.281809778.24740-0.317902.265301.69060HepG2MATR3
PSMB5ENSG00000100804.141955.232303079.07820-0.655203.873502.71340HepG2MTPAP
PSMB5ENSG00000100804.148033.5047010008.52940-0.317102.396701.80450HepG2NCBP2
PSMB5ENSG00000100804.145754.550109712.87000-0.7552022.6167020.58390HepG2NOL12
PSMB5ENSG00000100804.146370.174508913.01620-0.484605.027904.06590HepG2PABPC4
PSMB5ENSG00000100804.146472.144109030.88860-0.4806015.0004013.76950HepG2PCBP1
PSMB5ENSG00000100804.142526.362504994.34090-0.9832010.672708.82190HepG2PCBP2
PSMB5ENSG00000100804.141698.291504051.22950-1.2543046.0573043.73130HepG2PRPF4
PSMB5ENSG00000100804.143540.237705074.32590-0.519406.082304.93580HepG2PRPF8
PSMB5ENSG00000100804.145958.733509189.15000-0.6249022.9731021.68710HepG2PTBP1
PSMB5ENSG00000100804.148096.023809835.68300-0.280803.367302.62910HepG2PUM2
PSMB5ENSG00000100804.145175.293005981.38590-0.208803.496202.82210HepG2PUS1
PSMB5ENSG00000100804.144971.985809952.32530-1.0012041.5332039.63550HepG2QKI
PSMB5ENSG00000100804.1411812.262609865.550600.259704.284603.67630HepG2RBM22
PSMB5ENSG00000100804.145553.593809032.28090-0.7017016.0585014.51090HepG2RBM25
PSMB5ENSG00000100804.146092.1936010226.73880-0.7473034.5834033.12900HepG2NELFE
PSMB5ENSG00000100804.146011.386809524.64130-0.6640028.3056026.70380HepG2RECQL
PSMB5ENSG00000100804.145631.384206860.45690-0.284802.671301.99720HepG2RPLP0
PSMB5ENSG00000100804.144912.663806189.82520-0.333403.502102.60200HepG2RPS2
PSMB5ENSG00000100804.143769.291805330.81860-0.500103.720202.79270HepG2RPS3A
PSMB5ENSG00000100804.143721.287905019.48000-0.431703.901302.98740HepG2RRP9
PSMB5ENSG00000100804.145742.599509567.30070-0.7364034.0696032.41120HepG2SF3B4
PSMB5ENSG00000100804.147664.411108891.23330-0.214202.516301.84250HepG2SLBP
PSMB5ENSG00000100804.145783.580305210.130300.150502.476001.86280HepG2SMN1
PSMB5ENSG00000100804.1410032.5271011142.73820-0.151402.384701.90830HepG2SRFBP1
PSMB5ENSG00000100804.148574.827909986.10520-0.219804.303403.74570HepG2SRSF1
PSMB5ENSG00000100804.144562.157709155.27410-1.0049048.4262046.28590HepG2SRSF5
PSMB5ENSG00000100804.145088.444106256.62310-0.298205.925004.96900HepG2SRSF7
PSMB5ENSG00000100804.145911.616408124.15480-0.4587014.6560013.56590HepG2SRSF9
PSMB5ENSG00000100804.148187.415109674.46820-0.240804.624103.99480HepG2SSB
PSMB5ENSG00000100804.146994.4003010411.69840-0.5739018.3061016.93320HepG2SUCLG1
PSMB5ENSG00000100804.145303.569106549.00870-0.304302.323501.69680HepG2SUPV3L1
PSMB5ENSG00000100804.144383.897608975.66350-1.0338047.6378045.68130HepG2TAF15
PSMB5ENSG00000100804.146067.664408247.66370-0.442807.099905.77110HepG2TIA1
PSMB5ENSG00000100804.143463.417604840.09610-0.482803.161901.59580HepG2TRA2A
PSMB5ENSG00000100804.146479.734009589.23060-0.565506.228004.94220HepG2UBE2L3
PSMB5ENSG00000100804.143642.888704187.93810-0.201202.878002.16760HepG2UPF1
PSMB5ENSG00000100804.143298.640204740.24460-0.523103.645102.17400HepG2XRCC5
PSMB5ENSG00000100804.143086.661203998.01320-0.373209.499208.37990HepG2ZC3H8
PSMB5ENSG00000100804.147159.532504605.921700.6363034.6541033.27830HepG2ZNF622
PSMB5ENSG00000100804.143297.432304816.10750-0.546504.286802.64450HepG2ZRANB2
PSMB5ENSG00000100804.142305.237001928.579200.257303.260302.65340K562AGGF1
PSMB5ENSG00000100804.142564.304202006.764800.353603.382602.65840K562AKAP8L
PSMB5ENSG00000100804.142935.277003868.51360-0.398302.374801.82480K562AQR
PSMB5ENSG00000100804.141966.821302484.26170-0.337004.420103.18850K562BCLAF1
PSMB5ENSG00000100804.14734.929501028.48400-0.484803.559102.33150K562CCAR1
PSMB5ENSG00000100804.14730.03010961.32910-0.397103.383402.51310K562CPSF6
PSMB5ENSG00000100804.142619.031203274.29950-0.322204.846903.93090K562EIF2S2
PSMB5ENSG00000100804.14577.949301046.18370-0.856105.905704.39810K562EIF3A
PSMB5ENSG00000100804.141973.601501611.939000.291902.294701.54530K562EIF4A3
PSMB5ENSG00000100804.141368.511301841.02540-0.427904.419902.77560K562EXOSC5
PSMB5ENSG00000100804.142038.916001649.771200.305402.486801.68430K562FIP1L1
PSMB5ENSG00000100804.141023.349201376.69250-0.427902.801301.66690K562FKBP4
PSMB5ENSG00000100804.14713.11890978.08980-0.455803.655302.66850K562FMR1
PSMB5ENSG00000100804.14631.28080829.00210-0.393102.395401.55000K562FTO
PSMB5ENSG00000100804.142670.070801676.344300.671505.483704.67200K562FXR1
PSMB5ENSG00000100804.14635.281501245.90850-0.971709.469908.00760K562G3BP2
PSMB5ENSG00000100804.14696.71040917.84910-0.397702.428301.68230K562GPKOW
PSMB5ENSG00000100804.14936.066801585.98500-0.7607012.1321010.95680K562HNRNPC
PSMB5ENSG00000100804.141496.887701937.28800-0.372103.871101.63730K562HNRNPH1
PSMB5ENSG00000100804.142198.387801357.083000.695806.864805.29810K562HNRNPM
PSMB5ENSG00000100804.142671.553003183.04980-0.252702.793001.89460K562HNRNPU
PSMB5ENSG00000100804.141482.154001839.07730-0.311304.369903.37420K562MTPAP
PSMB5ENSG00000100804.143561.999104553.05460-0.354103.459501.77040K562NOL12
PSMB5ENSG00000100804.141677.481402043.38300-0.284705.002704.04000K562NSUN2
PSMB5ENSG00000100804.141685.942702341.78010-0.474104.221403.19330K562PCBP3
PSMB5ENSG00000100804.142544.942601872.993600.442204.630303.52980K562PPIG
PSMB5ENSG00000100804.142637.245601907.520900.467205.292804.40010K562PTBP1
PSMB5ENSG00000100804.143846.691004733.21570-0.299204.278903.07790K562PUM2
PSMB5ENSG00000100804.142527.638001990.226200.344802.993202.43310K562PUS1
PSMB5ENSG00000100804.142523.125701939.120800.379705.271804.47650K562RBM15
PSMB5ENSG00000100804.143308.920904138.01100-0.322603.598701.75870K562RBM17
PSMB5ENSG00000100804.141587.494502110.68160-0.411002.866302.03400K562RPS19
PSMB5ENSG00000100804.14548.07800872.84730-0.671305.524404.11640K562SF3B1
PSMB5ENSG00000100804.141534.344602044.61310-0.414205.113902.98110K562SRSF9
PSMB5ENSG00000100804.143114.979403962.66610-0.347204.636802.73470K562SUCLG1
PSMB5ENSG00000100804.142186.980001801.648400.279502.739401.92420K562SYNCRIP
PSMB5ENSG00000100804.142291.403001892.457000.275901.942701.34330K562TARDBP
PSMB5ENSG00000100804.141656.745702123.37450-0.358002.931801.87720K562UCHL5
PSMB5ENSG00000100804.141888.255102166.64210-0.198402.117701.48230K562UPF1
PSMB5ENSG00000100804.141497.321101853.92760-0.308202.824701.93860K562WDR3
PSMB5ENSG00000100804.141608.860702162.39530-0.426603.895002.36690K562XRN2
PSMB5ENSG00000100804.143472.047404358.55680-0.328102.134001.38660K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PSMB5 is not available on ENCORE database.






No RBPs affect the alternative splcing events of PSMB5 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PSMB5 is not avaliable on ENCORE database.